Metagenome / Metatranscriptome Family F074068

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074068
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	94 residues
Representative Sequence	MKRILRFCLLAGCGVASMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALECVRAGSPVAILTKDGDLYLPISDKM
Number of Associated Samples	100
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.46 %
% of genes near scaffold ends (potentially truncated)	89.17 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (25.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.59% β-sheet: 4.88% Coil/Unstructured: 58.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF03795	YCII	1.67
PF02449	Glyco_hydro_42	1.67
PF12867	DinB_2	1.67
PF13414	TPR_11	0.83
PF13413	HTH_25	0.83
PF01053	Cys_Met_Meta_PP	0.83
PF07676	PD40	0.83
PF08541	ACP_syn_III_C	0.83
PF14534	DUF4440	0.83
PF08592	Anthrone_oxy	0.83
PF01872	RibD_C	0.83
PF01548	DEDD_Tnp_IS110	0.83
PF07730	HisKA_3	0.83
PF13231	PMT_2	0.83
PF01244	Peptidase_M19	0.83
PF13419	HAD_2	0.83
PF11188	DUF2975	0.83
PF13408	Zn_ribbon_recom	0.83
PF04227	Indigoidine_A	0.83
PF00294	PfkB	0.83
PF14464	Prok-JAB	0.83
PF12680	SnoaL_2	0.83
PF00440	TetR_N	0.83
PF00903	Glyoxalase	0.83
PF05899	Cupin_3	0.83
PF11127	DUF2892	0.83
PF00561	Abhydrolase_1	0.83
PF12706	Lactamase_B_2	0.83
PF00144	Beta-lactamase	0.83
PF07969	Amidohydro_3	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	1.67
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.67
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.83
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.83
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.83
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.83
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.83
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.83
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.83
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.83
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.83
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.83
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.83
COG2313	Pseudouridine-5'-phosphate glycosidase (pseudoU degradation)	Nucleotide transport and metabolism [F]	0.83
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.83
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.83
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.83
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.83
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.83
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.17 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.17 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.17 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	82.50 %
Unclassified	root	N/A	5.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	78.33 %
Unclassified	root	N/A	5.83 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.33 %
Unclassified	root	N/A	5.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.50 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.33 %
Unclassified	root	N/A	5.83 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	2.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.67 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.33 %
Unclassified	root	N/A	5.83 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	2.50 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.83 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.83 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.83 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.33 %
Unclassified	root	N/A	5.83 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2.50 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.83 %
unclassified Cupriavidus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus	0.83 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.33 %
Unclassified	root	N/A	5.83 %
Parafilimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Parafilimonas	2.50 %
Cupriavidus sp. SK-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. SK-3	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.83 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.33 %
Unclassified	root	N/A	5.83 %
Parafilimonas terrae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Parafilimonas → Parafilimonas terrae	2.50 %
Cupriavidus sp. SK-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. SK-3	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.83 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12600245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300004092\|Ga0062389_104572643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	521	Open in IMG/M
3300005171\|Ga0066677_10248900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300005332\|Ga0066388_100565380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1765	Open in IMG/M
3300005332\|Ga0066388_103666215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300005335\|Ga0070666_10340328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300005434\|Ga0070709_11646196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300005435\|Ga0070714_100928061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300005529\|Ga0070741_10060600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. SK-3	4409	Open in IMG/M
3300005537\|Ga0070730_10141016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1641	Open in IMG/M
3300005537\|Ga0070730_10172465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1456	Open in IMG/M
3300005541\|Ga0070733_11035973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300005555\|Ga0066692_10898733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300005598\|Ga0066706_11479846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300005610\|Ga0070763_10782213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300005921\|Ga0070766_11269926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300006163\|Ga0070715_10778079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300009093\|Ga0105240_11199791	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300009148\|Ga0105243_10463114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1192	Open in IMG/M
3300009177\|Ga0105248_12812939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300009177\|Ga0105248_12885203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300009545\|Ga0105237_11228244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300009553\|Ga0105249_10349510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1497	Open in IMG/M
3300009635\|Ga0116117_1206361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300010048\|Ga0126373_10353865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1481	Open in IMG/M
3300010048\|Ga0126373_10492965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266	Open in IMG/M
3300010048\|Ga0126373_10800802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	1004	Open in IMG/M
3300010048\|Ga0126373_10913310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300010048\|Ga0126373_11801472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300010321\|Ga0134067_10243355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300010358\|Ga0126370_10213981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1467	Open in IMG/M
3300010358\|Ga0126370_12460491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300010361\|Ga0126378_10826719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1035	Open in IMG/M
3300010361\|Ga0126378_13181244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300010373\|Ga0134128_11036960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300010376\|Ga0126381_100480662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1748	Open in IMG/M
3300010376\|Ga0126381_103833102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300010379\|Ga0136449_103999651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300012096\|Ga0137389_11450710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300012361\|Ga0137360_10500414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300012922\|Ga0137394_10875915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300012924\|Ga0137413_11217174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300012925\|Ga0137419_11979922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012951\|Ga0164300_10324109	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300014164\|Ga0181532_10107752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1725	Open in IMG/M
3300014165\|Ga0181523_10049861	All Organisms → cellular organisms → Bacteria	2605	Open in IMG/M
3300016270\|Ga0182036_11178228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300016294\|Ga0182041_10068965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2478	Open in IMG/M
3300016319\|Ga0182033_10734618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300016319\|Ga0182033_12040726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300016371\|Ga0182034_11381523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300016387\|Ga0182040_10041543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2792	Open in IMG/M
3300016404\|Ga0182037_11425394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300016404\|Ga0182037_11542103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300016404\|Ga0182037_11615419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300016422\|Ga0182039_11023433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300017943\|Ga0187819_10460827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300017947\|Ga0187785_10360152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	687	Open in IMG/M
3300017948\|Ga0187847_10201868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300017948\|Ga0187847_10233188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300017961\|Ga0187778_10313428	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300017973\|Ga0187780_11173822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300017988\|Ga0181520_10361333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300018007\|Ga0187805_10363677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300018034\|Ga0187863_10822818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300018060\|Ga0187765_10243684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300018060\|Ga0187765_11377993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300020140\|Ga0179590_1125689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300020199\|Ga0179592_10406751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300020583\|Ga0210401_10844214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300021168\|Ga0210406_10966755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300021170\|Ga0210400_11362652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300021402\|Ga0210385_11039279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300021404\|Ga0210389_10644036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300021404\|Ga0210389_11289400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300021405\|Ga0210387_10465911	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M
3300021405\|Ga0210387_11664195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300021420\|Ga0210394_10257506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1527	Open in IMG/M
3300021475\|Ga0210392_10634408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300021478\|Ga0210402_10334004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1405	Open in IMG/M
3300021560\|Ga0126371_10551834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1301	Open in IMG/M
3300022515\|Ga0224546_1017081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300024290\|Ga0247667_1021780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300025906\|Ga0207699_10352010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300025941\|Ga0207711_10474310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1165	Open in IMG/M
3300025961\|Ga0207712_11607186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300025986\|Ga0207658_10022297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4409	Open in IMG/M
3300026481\|Ga0257155_1089683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027857\|Ga0209166_10360516	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Parafilimonas → Parafilimonas terrae	758	Open in IMG/M
3300028808\|Ga0302228_10419336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300028906\|Ga0308309_10193463	All Organisms → cellular organisms → Bacteria → Acidobacteria	1671	Open in IMG/M
3300029944\|Ga0311352_11006818	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300030058\|Ga0302179_10194578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300030520\|Ga0311372_10390758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2116	Open in IMG/M
3300030847\|Ga0075405_10801068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300031668\|Ga0318542_10412933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300031720\|Ga0307469_10844860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300031736\|Ga0318501_10166054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300031797\|Ga0318550_10300420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300031879\|Ga0306919_11093612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300031910\|Ga0306923_12455038	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Parafilimonas → Parafilimonas terrae	515	Open in IMG/M
3300031910\|Ga0306923_12569227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300031938\|Ga0308175_100092547	All Organisms → cellular organisms → Bacteria → Acidobacteria	2760	Open in IMG/M
3300031938\|Ga0308175_100222904	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300031947\|Ga0310909_10790899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300031962\|Ga0307479_11118005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300032001\|Ga0306922_10178918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2274	Open in IMG/M
3300032898\|Ga0335072_10373574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1546	Open in IMG/M
3300032954\|Ga0335083_10861311	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Parafilimonas → Parafilimonas terrae	722	Open in IMG/M
3300033158\|Ga0335077_10445441	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300033158\|Ga0335077_10672422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300033289\|Ga0310914_10103496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2454	Open in IMG/M
3300033513\|Ga0316628_102581592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.83%
Host-Associated	Host-Associated	9.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.83%
Aquatic	Environmental → Aquatic	10.00%
Plants	Host-Associated → Plants	9.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.67%
Freshwater	Environmental → Aquatic → Freshwater	10.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Peat	Environmental → Terrestrial → Peat	4.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.17%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022515	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_126002451	3300000789	Soil	MNRVLGFCLLTGCCVAAMAAMPAPLQKTSMEGARANRSEATIEGLVRDIACPMQNLDGDAXHLSLKCVRXCXKXGSXIGILTKDGEXYLPISDKMPDYSQRKKLMPFVGKYV
Ga0062385_110757332	3300004080	Bog Forest Soil	MSRFLSVCLLAGCWIVSVLAASHSPQRTSMEGDRANASKATIEGLVRDVACPIQNLDGTATNLSLKCVREC
Ga0062389_1045726431	3300004092	Bog Forest Soil	MKRILSLCLLAGCGVASIVGALPPPQKTSMEDARANKSKATIEGLVRDIACPIQNLDANATHLSMKCALDCLKAGSPLVILTKDGDLYLPIS
Ga0066677_102489001	3300005171	Soil	MKQISRFCLSAGCLVASIAAAPQPPQKTSMEGARANRSKATIEGLVRDVACPIQNLDGNATHLSMKCAMACVRAGSPIAILTKDG
Ga0066388_1005653802	3300005332	Tropical Forest Soil	MKRVLRFCLWAGCGVASLIAAPRPPQKTSMEGSRANKSKVTLEGLVRDIACPIQNLDGNATRLSMKCALGCVRAGSPLAILTRDGDLYLPISDKMPDYSQ
Ga0066388_1036662151	3300005332	Tropical Forest Soil	MNPFLRICLLAGCGIASILAASQPQQKTSMAGSRAHASQATIEGLLRDIACPIQNLDSNATALSMKCALDCVKGGSPIAILTKEGDLYLPISDEMPDA
Ga0070666_103403281	3300005335	Switchgrass Rhizosphere	MKRILRLCLLAGCGVASIVAAHQPPQKTSMEGSRANKSKATIEGLVRDIACPIQNLDGNATHLSMKCVLECVRAGSPLVILTKDGDLYLPISDKM
Ga0070709_116461962	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKPILRFCLLAGCGASIMAAPQPPQKTSMESSRANRSKATIEGLVRDVACPVQNLDGNATSMSMECVMGCVKGGSPIAILTKGGDLYLPISDKMPDYDQRQK
Ga0070714_1009280612	3300005435	Agricultural Soil	MKRILSFCLLAGCGAASIMGASQSQQKTSMEGARANKSEVTIEGLVRDIACPIQNLDGNATTVSLKCARACVRAGSPIAILTRDGTLYQPISDKMPDYSQRK*
Ga0070741_100606007	3300005529	Surface Soil	MEGARANRSEATIEGLLRDIACPMQNLDGDATHLSLKCVRDCVKAGSPLGILTKDGELYLPISEKMPDYSQRRKLMSFVGKYVQVKGISFERN
Ga0070730_101410163	3300005537	Surface Soil	MNRTLRFCVLTGCCFAVMVAMPKPIQKTSMEGARANRSEVTIEGLVRDIACPMQNLDGDATHLSLKCVRDCVKAGSPIGILTKSGEIYLPISDKMPDYSQRQRLMPFVGKYVQVKG
Ga0070730_101724651	3300005537	Surface Soil	MTRILRFCVLTGCWVATTVVLAEPVQRTSMEGDRANRAATTIEGLVRDIACPMQNLDGDATHLSLKCVRDCVKAGSPIGILTTDGALYLP
Ga0070733_110359731	3300005541	Surface Soil	MKRILRVCLLAGCGVASIVAALPPPQKTSMEDARANKSKATIEGLVRDIACPIQNLDGNATHLSMKCALDCLKAGSPL
Ga0066692_108987331	3300005555	Soil	MKRILRFCLLAGCGVASMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALECVRAGSPVAILTKDGDLYLPISDKM
Ga0066706_114798461	3300005598	Soil	MKRILRFCLLAGCGVASMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALECVRAGSPVAILTKDGDLYLPISDKMPDYDQRQKLMPFVGKYVRV
Ga0070763_107822132	3300005610	Soil	MKRILCLGLLAGCGVASIVAALPPPQKTSMEDARANKSKATIEGLVRDIACPIQNLDGNATHLSMKCALDCLKAGSPLVILTKDGDLYLPISDKMPDY
Ga0070766_112699261	3300005921	Soil	MKRILRVCLLAGCGVASIVAALPPPQKTSMEDARANKSKATIEGLVRDIACPIQNLDGNATHLSMKCALDCLKAGSPLV
Ga0070715_107780792	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKRILRFCLLAGCGVASMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLRMECALACVRAGSPVAILTKDGDLYVPISNKMPDYDQRQKLMPFVGKYVR
Ga0105240_111997911	3300009093	Corn Rhizosphere	MKPFLRLGLLAGCGIASILAASEPQQKTSMAGSRAHASQATIEGLLRDIACPIQNLDSSATALSVQCVVDCVKGGSPLVILT
Ga0105243_104631143	3300009148	Miscanthus Rhizosphere	MKRILRLCLLAGCGVASIVAAHQPPQKTSMEGSRANKSKATIEGLVRDIACPIQNLDGNATHLSMKCVLECVRAGSPLVILTKDGDL*
Ga0105248_128129391	3300009177	Switchgrass Rhizosphere	MNPFLRLCILVCGGIASLLAASPPPQKTSMPDSRAHASQATIEGLLRDMACPIQNLDSKATALSMKCVMDCVKGGSPLAILT
Ga0105248_128852031	3300009177	Switchgrass Rhizosphere	MKPFLRLGLLAGCGIASILAASQPQQKTSMAGSRAHASQATVEGLLRDIACPIQNLDSSATALSVQCVVDCVKGGSPL
Ga0105237_112282441	3300009545	Corn Rhizosphere	MNRYLSVCLLAGCGVVSILAASHPPQKTSMEGARANRSNATIEGLLRDIACPIQNLNGNATHLSMKCALDCVREGSPIAIL
Ga0105249_103495102	3300009553	Switchgrass Rhizosphere	MKRILRLCLLAGCGVASIVAAHQPPQKTSMEGSRANKSKATIEGLVRDIACPIQNLDGNATHLSMKCVLECVRAGSPLVILT
Ga0116117_12063611	3300009635	Peatland	MKRILRFCLLLVCSVASMTAAPRPAQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALACVRAGSPVAILTKDGDLY
Ga0126380_110606641	3300010043	Tropical Forest Soil	MEGARANRSKVTIEGLVRDVACPIQNLDGKATDMSLKCVTDCLKGGSPIAILTKDGDLYLPISDTMPDYSQTERLKPFVGKYVR
Ga0126373_103538654	3300010048	Tropical Forest Soil	MKRILRFCFLAGCGVASMIAAPQPPQKTSMESDRANRSNVTIEGLVRDIACPIQNLDGNATHLSMKCTLACVKAGSPLAILTKDGDLYLPISDKMPDY
Ga0126373_104929652	3300010048	Tropical Forest Soil	MKRILRLCIVAGCGVASMPAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALACVKAGSPIAILTKDGDLYLPISDKMPDYSQRQKLMPFVGKYVRV
Ga0126373_108008021	3300010048	Tropical Forest Soil	MMGAPQPPQKTSMEGARANRSKVTIEGLVRDIACPIQNLDGNATSLSLKCARACVRAGSPIAILTRDGDLYQPISDKMPDYSQRKKLMPFV
Ga0126373_109133101	3300010048	Tropical Forest Soil	MKRIVCFCLLAGCGVALMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALACVRAGSPIAILTKDGDLYLPISDKMPDYSQR
Ga0126373_118014722	3300010048	Tropical Forest Soil	MKRILSFCLLAGCSVAPMMGAPQPPQKTSMEGARANRSNVTIEGLVRDIACPIQNLDGKATSLSLKCARACVRAGSPIAILTKDGDLYQPISDKMPDYSQRKKLMPFVGKYVRVTGI
Ga0134067_102433552	3300010321	Grasslands Soil	MKQISRFCLSAGCLVASIAAAPQPPQKTSMEGARANRSKATIEGLVRDVACPIQNLDGNATHLSMKCAMACVRAGS
Ga0126370_102139812	3300010358	Tropical Forest Soil	MKQILLSCLLACGFAATMAAPQAEHKTSMEGARANRSDATIEGLVRDIACPIQNLDGNATHMSMKCVLDCVRGGSPLAILTKDGELYLPISDKMPDYSQKE
Ga0126370_124604911	3300010358	Tropical Forest Soil	MSRFLSVWLLAGCGVASILAASHPAQKTSMEGARANRSKVTIEGLLRDIACPIQNLDGNATHLSMKCVLDCVRAGSPIAILTKDGDLYLPISDKM
Ga0126372_114700821	3300010360	Tropical Forest Soil	MEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALACLRAGSPIAILTKDGDLYLPISDKMPDYSQRKKLMPFVGKYV
Ga0126378_108267191	3300010361	Tropical Forest Soil	MKILRFCLLTSCCFAAMVVMPAPLQRTSMEGARANRSEATIEGLVRDIACPIQNLDGDATHLSLKCVRDCVKAGSPVVILTKDGELYLPISDKMPDYSQREKLMPFLGK
Ga0126378_131812442	3300010361	Tropical Forest Soil	MNGILRLCVSTACCLSAIVATAEPLQKTSMEGARANRAEATIEGLVRDIACPVQNLDGDATHLSLKCVRDCVKAGSPVVILTKDGEL
Ga0134128_110369603	3300010373	Terrestrial Soil	MKRILSFCLLAGCGAASIMGAPQPQQKTSMEGARANKSEVTIEGLVRDIACPIQNLDGNATTVSLKCARACVRAGSPIAILTRDGALYQP
Ga0126381_1004806624	3300010376	Tropical Forest Soil	MNSFLRLCSLAGCGIASILAASHPQQKTSMAGSRAHSSQATIEGLLRDIACPIQNLDSNATALSMKCVLDCVKGGSPLVILT
Ga0126381_1038331021	3300010376	Tropical Forest Soil	MKRIVCFCLLAGGGVALMTAAPQPLQKTSMEGSRANRSKATIEGLVRDIACPMQNLDGNATHLSMKCALACVRAGSPIAILTKDGDLYLPISDKMPDYSQRQKLMPFVGKYVRVNGIA
Ga0136449_1039996511	3300010379	Peatlands Soil	MKQILRFCLLAGCSVALMTAAPQPPQKTSMEGSRANRSKVTIEGLVRDIACPIQNLDGNATHLSMKCALACVRAGSPVAILTKDGDL
Ga0137389_114507101	3300012096	Vadose Zone Soil	MKRILRFCLLAGCGVASMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALECVRAGSPVAI
Ga0137360_105004142	3300012361	Vadose Zone Soil	MKRILRFWVLAGCGVASMTAGPQPPQKTSMEGARANMSNATIEGLVRDIACPIQNLDGNATHLSMKCALACLKAGSPIAILTKDGDLYLPISDKMPDYSQRRKLMPFVGKYVRA
Ga0137394_108759152	3300012922	Vadose Zone Soil	MKRILRLGLLAGCGVASIVAAPQPPQKTSMEGSRANKSKATIEGLVRDIACPIQNLDGNATHLSMKCVLGCVKAGSPLVILTK
Ga0137413_112171741	3300012924	Vadose Zone Soil	MKRILRLCLLAGCGVASIVAAPQPPQKTSMEGSRANKSKATIEGLVRDIACPIQNLDGNATHLSMKCVLGCVKAGSPLVILTKEGDLY
Ga0137419_119799222	3300012925	Vadose Zone Soil	MKRILRLCLLAGCGVASIVAAPQPPQKTSMEGSRANKSKATIEGLVRDIACPIQNLDGNATHLSMKCALGCVRAGSPLVIL
Ga0164300_103241091	3300012951	Soil	VWLEAADTPRGGCRAEKGKSMTRIMLSGLLACGFAATMAAATAHKTSMEGARANRSVVTIEGLVRDIACPIQNLDGNATHFSMKCAQDCVRAGSPLAILTKDGELYLPISDKMPDYSQKEKLMP
Ga0181532_101077522	3300014164	Bog	MKQILRFCLLAGCGVALMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALACVRAGSPVAILTKDGDLYVPISNKMPDYDQRQKLMP
Ga0181523_100498611	3300014165	Bog	MKQILRFCLLAGCGVALMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALACVRAGSPVA
Ga0181528_100462482	3300014167	Bog	MIRPFGICVLACCEIVLAASQTPQKTSMEGSRANRSTVTIEGLVRDMACPIQNLDGNATSLGLKCARACVRAGSPIAILTKDGDLYQPISDKMPITLR*
Ga0132255_1032120981	3300015374	Arabidopsis Rhizosphere	MKRIVRLCLLAGCGVASIVAAPQPPQKTSMEGSRANKSKATIEGLVRDIACPIQNLDGNATHLSMKCVLGCVRAG
Ga0182036_111782281	3300016270	Soil	MKRILYVCLLAGCGVAWLIAAPKPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMNCVLACVGNGSP
Ga0182041_100689652	3300016294	Soil	MKRILVFCLWASCSVALMAAAPEPPQKTSMEGSRANRSEATIEGLLRDIACPIQNLDGNATHLSMKCVLGCVRAGSPLAILTKDGDLYLPISDKMPDYDQR
Ga0182033_107346181	3300016319	Soil	MKRILHFYLLAGCGVASMTAAPQPPQKTSMEGARANRSKATIEGLVRDMACPIQNLDGNATHLSMKCTLACVRAGSPIAILTKDGDLYLPISEKMPDYGQRKKLMPFVGKYVR
Ga0182033_120407261	3300016319	Soil	MKRILSFCLLAGCGVASMMGTAQPPQKTSMEGARANRSNVTIEGLVRDIACPIQNLDGNATHLSLKCARACIRAGSTI
Ga0182034_113815232	3300016371	Soil	MKRILYFCLLGCGIASMAAAPQPPQRTSMEGARANRSKTTIEGLVRDMACPIQNLDGNATHLSMKCALACVKAG
Ga0182040_100415431	3300016387	Soil	MKRILRFCLLAGCGVASMTAAPRPQKTSMEGSRANRSKAMIEGLVRDIACPIQNLDGNATHLSMKCALACARAGSP
Ga0182037_114253941	3300016404	Soil	MKRILLSCLLACGVVAMMAAPQGQQKTSMEGSRANRSNATIEGLVRDIACPIQNLDGNATHLSMKCVLECVRAGSPLAILTKDGELYVPI
Ga0182037_115421031	3300016404	Soil	MKRILVFCLWASCSVALMAAAPEPPQKTSMEGSRANRSEATIEGLLRDIACPIQNLDGNATHLSMKCVLGCVRAGSPLAILTKDGDLYLPISDKMPDY
Ga0182037_116154191	3300016404	Soil	MKRILRFCLLAGCGVASMTAAPRPQKTSMEGSRANRSKAMIEGLVRDIACPIQNLDGNATHLSMKCALACVRAGSPIAILT
Ga0182039_110234331	3300016422	Soil	MKRILRFCLLAGCGVASMMAGSQPPQKTSMEGARANRSNTTIEGLVRDIACPIQNLDGNATHLSMKCALACVRAGSPIAILIKDGDLYLPISDKMPDYGQRQKL
Ga0187819_104608271	3300017943	Freshwater Sediment	MKRILSFCLLAGCGVVSMTAAPPPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCVLGCVRAGSPLAILTKDGDLYVPISDKMP
Ga0187785_103601521	3300017947	Tropical Peatland	MKPFLRLCLMAGCAIAPILAASQPQQKTSMPGSRAHASYETIEGLLRDIACPIQNLDSKATAFSMKCVKDCV
Ga0187847_102018682	3300017948	Peatland	MIRPFGICVLACCEIVLAASQTPQKTSMEGSRANRSTVTIEGLVRDMACPIQNLDGNATSLGLKCARACVRAG
Ga0187847_102331883	3300017948	Peatland	MKRILRFCLLLVCSVASMTAAPRPAQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALACVRAGSPVAILTKDGDLYLPISDKMPDDDQRQKLMPFVGKYVRV
Ga0187778_103134281	3300017961	Tropical Peatland	MNRFLRLCLLAGCGIASILAASQPQQKTSMPGSRAHASQATIEGLLRDIACPIQNLDSNATALSMKCVLDCVK
Ga0187780_111738221	3300017973	Tropical Peatland	MKRVLSFCLLAGCGVASMMAAPQPPQKTSMEGSRANRSKTTIEGLVRDIACPIQNLDGNATHLSMKCAQACVRAGSP
Ga0181520_103613331	3300017988	Bog	MIRPLGICLLVCCEIVLAASQSPQRTSMEGSRANRSKVTIEGLVRDMACPIQNLDGNATSLSLKCARACVRAGSPIAILTRDGNLYQPISDKMPDYSQRKKLMPFVGKYVQVN
Ga0187805_103636772	3300018007	Freshwater Sediment	MKRILRFCLMAGCGVVSMTAAPQPAQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALACVRAGSPIAILSKDG
Ga0187863_108228181	3300018034	Peatland	MIRPFGICVLACCEIVLAASQTPQKTSMEGSRANRSTVTIEGLVRDMACPIQNLDGNATSLGLKCARACVRAGSPIAILTKDGDLYQPISDKMPITLR
Ga0187765_102436843	3300018060	Tropical Peatland	MNRFLRLCLLAGCAVAPLLAASQPQQKTSMPGSRAHASQETIEGLLRDIACPIQNLDSKATAFSMKCVKDCVKGGSPLAILSKDGDLYLPISDTMPDADQR
Ga0187765_113779932	3300018060	Tropical Peatland	MKRILRLCVLAGCGVASIGVATMIVAALVAASQPAQKTSMESARANRSQATVEGLVRDIACPIQNLDGNATHLSMECALGCVKAGSPLAILTKDGDLYLPISDKMPDYTQREKLLPF
Ga0179590_11256891	3300020140	Vadose Zone Soil	MKRILRFWVLAGCGVASMTAGPQPPQKTSMEGARANMSNATIEGLVRDIACPIQNLDGNATHLSMKCALACLKAGSPIAILTKDGDLYLPISDKNAGLS
Ga0179592_104067511	3300020199	Vadose Zone Soil	MKRILRFCLLAGCGVASMTAAHEPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALECVRAGSPVAILTKDGDLYL
Ga0210401_108442141	3300020583	Soil	MKQILRFGLLAGCGVASIMAAPQPTQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCVLGCVRAGSPLAILTKDGDLYLPISDKMPDYDQRQ
Ga0210406_109667551	3300021168	Soil	MKRILRLGLLAGCGVASIVAALPPPQKTSMEDARANKSKATIEGLVRDIACPIQNLDGNATHLSMKCALDCLKAGSPLVILTKDGDLYLPISDKMPDYD
Ga0210400_113626522	3300021170	Soil	MIGARPAAQHTSMEGARANRSKVTIEGLVRDVACPIQNLDGKATDMSLKCVTDCLKGGSPIAILTKDGDLYLPISDKMPDYSQREKLTPFVGKYVRATG
Ga0210385_110392791	3300021402	Soil	MKRILGMCLLAGWGIGAMCFAAGASRAQKTSMESSRANRSKLTIEGLVRDVACPIQNLDGNATSMSLECVMGCVKGGSPIAILTKDGDLYLPISDKMPDYD
Ga0210389_106440361	3300021404	Soil	MRRVLRVGALIAFGVAAIGAGGLSLRAQHTSMEAARANRSKVTIEGLVRDVACPIQNLDGKATDMSLKCVTDCLKGGSPIAILTKDGDLYLPISDKMPDFSQREKLMPFVGKYVRATGIA
Ga0210389_112894001	3300021404	Soil	MKQILRFGLLAGCGVASIMAAPQPTQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCVLGCVRAGSPLAILTKDGDLYLPISDKMPD
Ga0210387_104659111	3300021405	Soil	MIRPFSICLLACCEIVLAASQAPQKTSMEGSRANRSNVTIEGLVRDMACPIQNLDGNATSLSLKCVRACVRAGSPIAILTRDGDLYQPISNKMPDYSQMKKL
Ga0210387_116641951	3300021405	Soil	MKRILGMCLLAGWGIGAMCFAAGASRAQKTSMESSRANRSKLTIEGLVRDVACPIQNLDGNATSMSLECVMGCVKGGSPIAILTKDGDLYLPISDKMP
Ga0210394_102575061	3300021420	Soil	MKRILRFCIWAGCGVASMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGTATNLSMKCALACVKAGSPVAILTKDGDLYLTISDKMPD
Ga0210392_106344081	3300021475	Soil	MKRTLGMCLLAGWGIGAMCFAAGTSRAQKTSMESSRANRSKVTIEGLVRDVACPIQNLDGNATSMSLECVMGCVKGGSPIAILTKDGDLYLPISDKMPDYDQRTKLAPFVGKYVRATG
Ga0210402_103340043	3300021478	Soil	MKRILHFCFLAGCGVASMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCVLGCVRAGSPLAILTKDGDLYLPISEKMPDYDQR
Ga0126371_105518342	3300021560	Tropical Forest Soil	MKRILRFCFVAGCGVASMLAAPQPAQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALACVKAGSP
Ga0224546_10170811	3300022515	Soil	MIRPFSICLLACCEIVLAASQPPQKTSMEGSRANRSKVTIEGLVRDMACPIQNLDGNANSLSLKCARACVRDGSPIAILTRDGDLYQPISDKMPDY
Ga0247667_10217803	3300024290	Soil	MKRILRFCLLAGCGVASMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSVKCALACVRAGSPVAILTKDGDLYLPISNKMPDYAQRQKLMPFVGKF
Ga0207699_103520102	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKPILRFCLLAGCGASIMAAPQPPQKTSMESSRANRSKATIEGLVRDVACPVQNLDGNATSMSMECVMGCVKGGSPIAILTKGGDLYLPISDKMPDYDQRQKLM
Ga0207711_104743103	3300025941	Switchgrass Rhizosphere	MKPFLRLGLLAGCGIASILAASQPQQKTSMAGSRAHASQATVEGLLRDIACPIQNLDSSATALSLQCVVDCVKGGSPLVILTREGDL
Ga0207712_116071861	3300025961	Switchgrass Rhizosphere	MKRILRLCLLAGCGVASIVAAHQPPQKTSMEGSRANKSKATIEGLVRDIACPIQNLDGNATHLSMKCVLECVRAGSPLVILTK
Ga0207658_100222978	3300025986	Switchgrass Rhizosphere	MNPFLRLCVLVCCGVASFLAASPPPQKTSMPGSRAHKSQATIEGLLRDIACPMQNLDSRATALSTKCVMDCVKGGSPLAILTREGDLYLPISDEMPDVGQ
Ga0257155_10896832	3300026481	Soil	MKRILRFCLLAGCGVASMTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPIQNLDGNATHLSMKCALECVRAGSPVA
Ga0209166_103605161	3300027857	Surface Soil	MTRILRFCVLTGCWVATTVVLAEPVQRTSMEGDRANRAATTIEGLVRDIACPMQNLDGDATHLSLKCVRDCVKAGSPIGILTTDGALYLPISD
Ga0302228_104193361	3300028808	Palsa	MIRPFSICLLACCEIVLAASQPPQKTSMEGSRANRSKVTIEGLVRDMACAIQNLDGNANSLSLKCARACVRDGSPIAILTR
Ga0308309_101934631	3300028906	Soil	MRRNLQAWLLVGAGIASLGEAATTFAQHTSMEGARANRSKVTIEGLVRDVACPIQNLDGKATDMSLKCVTDCLKGGSPIAILTKDGDLYLPISDKMPDYDQREKLMPLWGSMCGRRGSRLRGMGCMRL
Ga0311352_110068182	3300029944	Palsa	MKRILRFCLLAVCGVASLTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPMQNLDGNATHLSMRCALACVNAGS
Ga0302179_101945782	3300030058	Palsa	MKRILRFCLLAVCGVASLTAAPQPPQKTSMEGSRANRSKATIEGLVRDIACPMQNLDGNATHLSMRCALACVNAGSPIAILTKDGDLYLPISDKMPDYDQRRKLLPFVGKY
Ga0311372_103907581	3300030520	Palsa	MIRPFSICLLACCEIVLAASQPPQKTSMEGSRANRSKVTIEGLVRDMACPIQNLDGNANSLSLKCARACVRDGSPIAILTR
Ga0075405_108010681	3300030847	Soil	MIRCLRLCLLAGCGIVAMLAADKPPQHTAMAGDRANASKATITGLVRDIACPIQNLDSNATHLSMKCVLACVKG
Ga0318542_104129331	3300031668	Soil	MKRILSFCLLAGCGVASMMGTAQPPQKTSMEGARANRSNVTIEGLVRDIACPIQNLDGNATHLSLKCARACIRAGSPIAILTKDGDLYQPISDKMPDYSQRKKLIPFVGKYV
Ga0307474_104896642	3300031718	Hardwood Forest Soil	MIRPLSICLLACCEIVLAATQVPQKTSMEGSRANRSQVTIEGLVRDMACPIQNLDGNATSLSLKCARACVRA
Ga0307469_108448601	3300031720	Hardwood Forest Soil	MKRIVRFCLLAGCGVASMTAAPQPPQKTSMEGSRANRSTATIEGLVRDIACPIQNLDGNATHLSMKCALACVRAGSPVAILTKDGDLYLPISD
Ga0318501_101660542	3300031736	Soil	MQQRLGAGKRGRMKRILRFCFVAGCGVASMLAAPEPPQKTSMEGSHANRSKATIEGLVRDMACPIQNLDGNATHLSMKCALACVKAGSPIAI
Ga0318554_105337242	3300031765	Soil	MKRILVFCLWASCSVALMAAAPEPPQKTSMEGSRANRSEATIEGLLRDIACPIQNLDGNATHLSMKCVLGCVRAG
Ga0318550_103004201	3300031797	Soil	MQQRLGAGKRGRMKRILWFCFVAGCGVASMLAAPEPPQKTSMEGSRANRSKATIEGLVRDMACPIQNLDGNATHLSMKCALACVKAGSPIAILTKDGDLYL
Ga0306919_110936121	3300031879	Soil	MKRILHFYLLAGCGVASMTAAPQPPQKTSMEGARANRSKATIEGLVRDMACPIQNLDGNATHLSMKCTLACVRAGSPIAIL
Ga0306923_124550381	3300031910	Soil	MKRILYFCLLGCGIASMAAAPQPPQRTSMEGARANRSKTTIEGLVRDMACPIQNLDGNATHLSMKCALACVKAGSPIAILTKDGELYLPISDKMPDYSQRQKLIPLVGKYVRVDGIV
Ga0306923_125692271	3300031910	Soil	MKRILSFCLLAGCGVASMMGTAQPPQKTSMEGARANRSNVTIEGLVRDIACPIQNLDGNATHLSLKCARACIRAGSPIAILTKDGDLY
Ga0308175_1000925473	3300031938	Soil	MSRILRFCLSTGCCVAAMAAMPASLQKTSMEGARANRSEATIEGLVRDIACPMQNLDGDATHLSLTCVRECVKAGSPIGILTKDGELYLPISDKMPDYSRRKS
Ga0308175_1002229041	3300031938	Soil	MNGILRLCLLTGCCVAAMAAMPAALQKTSMEGARANRSEATIEGLVRDIACPMQNLDGDATHLSLKCVRECVKAGSPIGILTKDGELYLP
Ga0310909_107908991	3300031947	Soil	MKRILHFYLLAGCGVASMTAAPQPPQKTSMEGARANRSKATIEGLVRDMACPIQNLDGNATHLSMKCTLACVRAGSPIAILTKDGDLYLPISE
Ga0307479_111180051	3300031962	Hardwood Forest Soil	MKRILTLCLLAGFGVASMMGAPPPPQKTSMEGARANRSNVTIEGLVRDIACPIQNLDGNATHLSLKCVRACLRAGSPIAIL
Ga0306922_101789182	3300032001	Soil	MQQRLGAGKRGRMKRILRFCFVAGCGVASMLAAPEPPQKTSMEGSRANRSKATIEGLVRDMACPIQNLDGNATHLSMKCALACVKAGSPIAILTKDGDLYLPISDKMPDYSQRQKLM
Ga0335072_103735742	3300032898	Soil	MIRPVSICLLACCEILLAASQTPQRTSMEGSRANRSEVTIEGLVRDMACPIQNLDGNATSLSLKCARACVRAGSPIAILTRDGDLY
Ga0335083_108613111	3300032954	Soil	MNGVLGFCLLTGCCVAAMVAMPAPLQKTSMEGARANRSEVTIEGLVRDIACPIQNLDGDATHLSLKCVRDCVKAGSPIGILTKDGDLYLPISDKMPDYSQRKRLMPFVGK
Ga0335077_104454412	3300033158	Soil	MKPFLRFCLLAGCGIASMMAAPQSSQKTSMEGARAIRSDATIEGLVRDIACPIQNLDGNATHLSMKCTLACLKAGSPLAILTRDGDLYLPISDKMPDYDQRERLMPFVGKYVRASGIV
Ga0335077_106724222	3300033158	Soil	MNRILRFCILTACCFMVLVAMPKPLQKTSMEGSRANRSEATIEGLVRDIACPMQNLDGDATHLSLKCVRDCVNAGS
Ga0310914_101034961	3300033289	Soil	MKRILHFYLLAGCGVASMTAAPQPPQKTSMEGARANRSKATIEGLVRDMACPIQNLDGNATHLSMKCTLACVRAGSPIAILTKDGDLYLPISEKMP
Ga0316628_1025815921	3300033513	Soil	MKRILSFCLLAGCGAASIMGAPQPQQKTSMEGARANKSEVTIEGLVRDIACPIQNLDGNATSLSLKCARAGVRAGSPIAILTKNGTLYQPVSDKMPDYS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074068

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences