NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F074191

Metagenome Family F074191

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F074191
Family Type Metagenome
Number of Sequences 120
Average Sequence Length 64 residues
Representative Sequence MNETNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLQRVKFLQPADGSKYN
Number of Associated Samples 85
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 81.67 %
% of genes near scaffold ends (potentially truncated) 25.83 %
% of genes from short scaffolds (< 2000 bps) 75.00 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.333 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(19.167 % of family members)
Environment Ontology (ENVO) Unclassified
(27.500 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.500 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 23.66%    β-sheet: 0.00%    Coil/Unstructured: 76.34%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF09084NMT1 8.33
PF01977UbiD 8.33
PF14518Haem_oxygenas_2 7.50
PF07589PEP-CTERM 2.50
PF03401TctC 1.67
PF00072Response_reg 1.67
PF11249DUF3047 1.67
PF07969Amidohydro_3 1.67
PF01725Ham1p_like 1.67
PF08239SH3_3 0.83
PF04228Zn_peptidase 0.83
PF13701DDE_Tnp_1_4 0.83
PF00589Phage_integrase 0.83
PF03070TENA_THI-4 0.83
PF03972MmgE_PrpD 0.83
PF07883Cupin_2 0.83
PF14154DUF4306 0.83
PF13343SBP_bac_6 0.83
PF01527HTH_Tnp_1 0.83
PF00565SNase 0.83
PF04002RadC 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 8.33
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 8.33
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 8.33
COG0127Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase familyNucleotide transport and metabolism [F] 1.67
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 1.67
COG2003DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motifReplication, recombination and repair [L] 0.83
COG20792-methylcitrate dehydratase PrpDCarbohydrate transport and metabolism [G] 0.83
COG2321Predicted metalloproteaseGeneral function prediction only [R] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.33 %
UnclassifiedrootN/A1.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig185032All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium684Open in IMG/M
2162886006|SwRhRL3b_contig_3536130All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium960Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0662970All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1715Open in IMG/M
3300000550|F24TB_12737516All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1248Open in IMG/M
3300000956|JGI10216J12902_100186529Not Available899Open in IMG/M
3300000956|JGI10216J12902_100532259All Organisms → cellular organisms → Bacteria2541Open in IMG/M
3300002908|JGI25382J43887_10377862All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium599Open in IMG/M
3300004114|Ga0062593_100289993All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1385Open in IMG/M
3300004463|Ga0063356_100374980All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1814Open in IMG/M
3300005294|Ga0065705_10104489All Organisms → cellular organisms → Bacteria14370Open in IMG/M
3300005294|Ga0065705_11175971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium506Open in IMG/M
3300005445|Ga0070708_100222329All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1771Open in IMG/M
3300005447|Ga0066689_10986626All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium519Open in IMG/M
3300005459|Ga0068867_100090531All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2321Open in IMG/M
3300005471|Ga0070698_100438082All Organisms → cellular organisms → Bacteria → Proteobacteria1242Open in IMG/M
3300005546|Ga0070696_101101838All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium667Open in IMG/M
3300005886|Ga0075286_1005462All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1446Open in IMG/M
3300005890|Ga0075285_1000920All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2954Open in IMG/M
3300005895|Ga0075277_1050255All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium645Open in IMG/M
3300006049|Ga0075417_10051849All Organisms → cellular organisms → Bacteria1773Open in IMG/M
3300006049|Ga0075417_10068244All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1570Open in IMG/M
3300006049|Ga0075417_10132518All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1150Open in IMG/M
3300006806|Ga0079220_10266106All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1036Open in IMG/M
3300006844|Ga0075428_100760547All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1031Open in IMG/M
3300006844|Ga0075428_101218887All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium793Open in IMG/M
3300006845|Ga0075421_101832945All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium652Open in IMG/M
3300006847|Ga0075431_101688860All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium590Open in IMG/M
3300006852|Ga0075433_10006786All Organisms → cellular organisms → Bacteria9079Open in IMG/M
3300006852|Ga0075433_10829219All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium808Open in IMG/M
3300006880|Ga0075429_100711043All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria880Open in IMG/M
3300006904|Ga0075424_100298052All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1716Open in IMG/M
3300006969|Ga0075419_10553063All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium804Open in IMG/M
3300009012|Ga0066710_100117063All Organisms → cellular organisms → Bacteria3617Open in IMG/M
3300009100|Ga0075418_12262613All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium593Open in IMG/M
3300009137|Ga0066709_100096247All Organisms → cellular organisms → Bacteria3605Open in IMG/M
3300009147|Ga0114129_10010569All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium13163Open in IMG/M
3300009147|Ga0114129_11085958All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1003Open in IMG/M
3300009147|Ga0114129_11587114All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium801Open in IMG/M
3300009162|Ga0075423_10027880All Organisms → cellular organisms → Bacteria → Proteobacteria5683Open in IMG/M
3300009807|Ga0105061_1013039All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300009810|Ga0105088_1033452All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300009837|Ga0105058_1098898All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium684Open in IMG/M
3300010304|Ga0134088_10276590All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium809Open in IMG/M
3300010360|Ga0126372_12648941All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium553Open in IMG/M
3300012021|Ga0120192_10009739All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1391Open in IMG/M
3300012204|Ga0137374_10004952All Organisms → cellular organisms → Bacteria15835Open in IMG/M
3300012204|Ga0137374_10037811All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium5156Open in IMG/M
3300012204|Ga0137374_10115893All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2478Open in IMG/M
3300012204|Ga0137374_11078185All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium574Open in IMG/M
3300012209|Ga0137379_10400536All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1282Open in IMG/M
3300012350|Ga0137372_10345997All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1140Open in IMG/M
3300012353|Ga0137367_10005445All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria10319Open in IMG/M
3300012353|Ga0137367_10031611All Organisms → cellular organisms → Bacteria4085Open in IMG/M
3300012353|Ga0137367_10562338All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium800Open in IMG/M
3300012355|Ga0137369_10060808All Organisms → cellular organisms → Bacteria → Proteobacteria3245Open in IMG/M
3300012355|Ga0137369_10155320All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1813Open in IMG/M
3300012355|Ga0137369_10498952All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium860Open in IMG/M
3300012360|Ga0137375_10233815All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1710Open in IMG/M
3300012498|Ga0157345_1009849All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria822Open in IMG/M
3300012929|Ga0137404_12180518All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium518Open in IMG/M
3300012931|Ga0153915_10414190All Organisms → cellular organisms → Bacteria → Proteobacteria1528Open in IMG/M
3300014311|Ga0075322_1049444All Organisms → cellular organisms → Bacteria → Proteobacteria917Open in IMG/M
3300015371|Ga0132258_11726419All Organisms → cellular organisms → Bacteria → Proteobacteria1579Open in IMG/M
3300017659|Ga0134083_10559113All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium519Open in IMG/M
3300017930|Ga0187825_10002827All Organisms → cellular organisms → Bacteria5579Open in IMG/M
3300017994|Ga0187822_10200792All Organisms → cellular organisms → Bacteria → Proteobacteria665Open in IMG/M
3300017997|Ga0184610_1111095All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium876Open in IMG/M
3300017997|Ga0184610_1279016All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium552Open in IMG/M
3300018027|Ga0184605_10117765All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1181Open in IMG/M
3300018028|Ga0184608_10043822All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1737Open in IMG/M
3300018028|Ga0184608_10095502All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300018031|Ga0184634_10000918All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria8284Open in IMG/M
3300018054|Ga0184621_10069726All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1207Open in IMG/M
3300018054|Ga0184621_10099462All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1028Open in IMG/M
3300018061|Ga0184619_10051614Not Available1790Open in IMG/M
3300018061|Ga0184619_10170650All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium996Open in IMG/M
3300018071|Ga0184618_10008031All Organisms → cellular organisms → Bacteria3080Open in IMG/M
3300018071|Ga0184618_10015687All Organisms → cellular organisms → Bacteria → Proteobacteria2387Open in IMG/M
3300018071|Ga0184618_10217415All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium802Open in IMG/M
3300018075|Ga0184632_10010347All Organisms → cellular organisms → Bacteria → Proteobacteria3912Open in IMG/M
3300018075|Ga0184632_10253549All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium768Open in IMG/M
3300018075|Ga0184632_10475004All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium515Open in IMG/M
3300018076|Ga0184609_10017913All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2762Open in IMG/M
3300018076|Ga0184609_10154336All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1058Open in IMG/M
3300018076|Ga0184609_10206452All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium916Open in IMG/M
3300018076|Ga0184609_10235271All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium856Open in IMG/M
3300018076|Ga0184609_10423321All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium616Open in IMG/M
3300018078|Ga0184612_10010390All Organisms → cellular organisms → Bacteria4698Open in IMG/M
3300018082|Ga0184639_10015992All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3692Open in IMG/M
3300018422|Ga0190265_10250326All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1818Open in IMG/M
3300018422|Ga0190265_11557968All Organisms → cellular organisms → Bacteria → Proteobacteria773Open in IMG/M
3300018422|Ga0190265_12744249All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium588Open in IMG/M
3300019377|Ga0190264_10072224All Organisms → cellular organisms → Bacteria → Proteobacteria1497Open in IMG/M
3300019789|Ga0137408_1158848All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2183Open in IMG/M
3300020003|Ga0193739_1085553All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium800Open in IMG/M
3300021073|Ga0210378_10051739All Organisms → cellular organisms → Bacteria → Proteobacteria1619Open in IMG/M
3300021073|Ga0210378_10077960All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1298Open in IMG/M
3300021080|Ga0210382_10019712All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2422Open in IMG/M
3300026324|Ga0209470_1061283All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1777Open in IMG/M
3300026535|Ga0256867_10116408All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1020Open in IMG/M
3300026537|Ga0209157_1087827All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1508Open in IMG/M
3300027209|Ga0209875_1006213All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300027637|Ga0209818_1087325All Organisms → cellular organisms → Bacteria → Proteobacteria809Open in IMG/M
3300027639|Ga0209387_1002202All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3512Open in IMG/M
3300027665|Ga0209983_1144141All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium545Open in IMG/M
3300027682|Ga0209971_1003835All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3556Open in IMG/M
3300027682|Ga0209971_1033622All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1232Open in IMG/M
3300027717|Ga0209998_10013395All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1707Open in IMG/M
3300027873|Ga0209814_10037473All Organisms → cellular organisms → Bacteria2012Open in IMG/M
3300027873|Ga0209814_10098611All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1239Open in IMG/M
3300027873|Ga0209814_10126630All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1090Open in IMG/M
3300027873|Ga0209814_10273778All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium733Open in IMG/M
3300027876|Ga0209974_10000627All Organisms → cellular organisms → Bacteria11887Open in IMG/M
3300027909|Ga0209382_10047158All Organisms → cellular organisms → Bacteria5146Open in IMG/M
3300027909|Ga0209382_11490874All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium674Open in IMG/M
3300028814|Ga0307302_10674466All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium514Open in IMG/M
(restricted) 3300031197|Ga0255310_10102412All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium770Open in IMG/M
3300031858|Ga0310892_10889981All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium622Open in IMG/M
3300033513|Ga0316628_100590998All Organisms → cellular organisms → Bacteria → Proteobacteria1445Open in IMG/M
3300034165|Ga0364942_0099012All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium943Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment19.17%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere19.17%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.83%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere5.00%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand3.33%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.50%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.50%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.50%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.50%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.50%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.67%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.67%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.83%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.83%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.83%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.83%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.83%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
2162886006Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005886Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205EnvironmentalOpen in IMG/M
3300005890Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104EnvironmentalOpen in IMG/M
3300005895Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009807Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300012021Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012498Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410Host-AssociatedOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300027209Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027639Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)EnvironmentalOpen in IMG/M
3300027665Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300034165Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_038138702124908045SoilMQEIDSQFGKPSSWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKILQPAEGPKIN
SwRhRL3b_0079.000006002162886006Switchgrass RhizosphereMKSAEGEMAKPSYWQLIFLQSKVNGGNYTGEELPGRNWDWPKDTYLQRRLHQAKYLQVPENSRLN
ICChiseqgaiiDRAFT_066297033300000033SoilMRTTEAEMAKPSYWQLIFLQSKVNGASYGGEALPGRNWDWPKDTYLQRRLHQARYLQISDASRLN*
F24TB_1273751613300000550SoilMNETNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLRRVKFFQPADSSKMN*
JGI10216J12902_10018652923300000956SoilMKATESTTATPTYWQLIFLQSKVNGASYNGEALARHNWDWPKETYLQRRLHR
JGI10216J12902_10053225923300000956SoilMQEIDSQFGKLSSWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHRIKFLQPAEGSKIN*
JGI25382J43887_1037786223300002908Grasslands SoilMNQTNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLQRVKFFQPADGYKVN*
Ga0062593_10028999333300004114SoilMKTAESPIRKPSYWQFIFLQSKVNGASYDGEGLPRQNWEWPKNTYFQRRLSRTKL
Ga0063356_10037498023300004463Arabidopsis Thaliana RhizosphereMKSPEGEMAKPSYWQLIFLQSKVNGGNYNGEELPGRNWDWPKDTYLQRRLHQARYLQVPENSRLN*
Ga0065705_10104489123300005294Switchgrass RhizosphereMKSAEGEMAKPSYWQLIFLQSKVNGGNYTGEELPGRNWDWPKDTYLQRRLHQAKYLQVPENSRLN*
Ga0065705_1117597113300005294Switchgrass RhizosphereMNETNTELGKPSYWQLIFLQSRVNGAAYNGEKLPGRNWDWPKDTYFQRRLRRVKFFQPADSSKMN*
Ga0070708_10022232923300005445Corn, Switchgrass And Miscanthus RhizosphereMNETNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLQRVKFFQPADGYKVN*
Ga0066689_1098662613300005447SoilWQLIFLQSKVNGAPYNGEALPGQSWDWPKHTYFQRRLHLIKILEPAEGFKIN*
Ga0068867_10009053123300005459Miscanthus RhizosphereMKSTESDLEKPSYWQLVFLQSKVNGAAYSGEELPGRNWDWPKDTYLQRRLSTYKFYTHRNTLN*
Ga0070698_10043808223300005471Corn, Switchgrass And Miscanthus RhizosphereMNQTDLENSKPSYWQLIFSQSKANGAPYNGEMLPGRNWDWPKDTYLQRRLQRVKFLQPSDGAKMN*
Ga0070696_10110183823300005546Corn, Switchgrass And Miscanthus RhizosphereMKSPEEEMAKPSYWQLIFLQSKVNGANYNGEELPGRNWDWPKDTYLQRRLHQAKY
Ga0075286_100546213300005886Rice Paddy SoilMKAMEGETSKPSYWQLIFLQSKVNGAAYNGEDLPGRNWDWPKDTYLQKRLHQAKFLQPSEHSKMN*
Ga0075285_100092013300005890Rice Paddy SoilMKAMEGETSKPSYWQLIFLQSKVNGAAYNGEDLPGRNWDWPKDTYLQKRLHQAKFLQPS
Ga0075277_105025513300005895Rice Paddy SoilMKPTENKLEKPSYWQLIFMQSKVNGASYNGEELSGRHWDWPKDTYLQRRLRKQRFFQSPESARLN*
Ga0075417_1005184973300006049Populus RhizosphereMKATESTTANPTYWQLIFLQSKVNGASYNGEALARHNWDWPKETYLQRRLHRIKFLEPVERSKPL*
Ga0075417_1006824433300006049Populus RhizosphereMRMRMQLKKDSVKTKKSQSGKPSCWQLIFLQSKVNGAPYNGETLPGESWDWPKDTYLQRRLHRIKILQSAEGFKVN*
Ga0075417_1013251823300006049Populus RhizosphereMNDTQTELGKPSYWQLIFLQSKVNGAAYNGETLPGRNWDWPKGTYLQRRLQRVKFLQPADGSKDN*
Ga0079220_1026610613300006806Agricultural SoilESDVEKPSYWQLVFLQSKVNGAAYSGEELPGRNWDWPKDTYLQRRLRNSKFLHPAEHFKLN*
Ga0075428_10076054723300006844Populus RhizosphereMKATESTTGNPTYWQLIFLQSKVNGASYNGEALARHNWDWPKETYLQRRLHRIKFLEPVERSKPH*
Ga0075428_10121888713300006844Populus RhizosphereMNETNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLRRVKFLQPADSSKMN*
Ga0075421_10183294523300006845Populus RhizosphereMKATESTTANPTYWQLIFLQSKVNGASYNGEALARHNWDWPKETYLQRRLHRIKFLEPVERSKPH*
Ga0075431_10168886013300006847Populus RhizosphereMHGTGSQLERRSYWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLSKMLQPAEGSKIN*
Ga0075433_1000678663300006852Populus RhizosphereMQLKKDSVKTKKSQSGKPSCWQLIFLQSKVNGAPYNGETLPGESWDWPKDTYLQRRLHRIKILQSAEGFKVN*
Ga0075433_1082921923300006852Populus RhizosphereMHETNTESGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLQRVKFFQPADGYKVN*
Ga0075429_10071104323300006880Populus RhizosphereMHETESQLERRSYWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKMLQPAEGSKIN*
Ga0075424_10029805213300006904Populus RhizosphereMHETNTESGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLQRVKF
Ga0075419_1055306323300006969Populus RhizosphereMNETNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYLQRRLHQARYLQI
Ga0066710_10011706343300009012Grasslands SoilMQETESQLGKPSYWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKILEPAEGFKIN
Ga0075418_1226261313300009100Populus RhizosphereREEENSVKTKESQLGKRSCWQFIFLQSRVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKILQPAESLKVN*
Ga0066709_10009624753300009137Grasslands SoilMQETESQLGKPSYWQLIFLQSKVNGAPYNGEALPGQSWDWPKHTYFQRRLHLIKILEPAEGFKIN*
Ga0114129_10010569163300009147Populus RhizosphereMQETQPQLKNPSYWQLIFLQSKVNGAPYRGEALPGQSWDWPKNTYFQRRLHLIKILQPAEGSKIN*
Ga0114129_1108595823300009147Populus RhizosphereMRMQLKKDSVKTKKSQSGKPSCWQLIFLQSKVNGAPYNGETLPGESWDWPKDTYLQRRLHRIKILQSAEGFKVN*
Ga0114129_1158711423300009147Populus RhizosphereMHGTGSQLERRSYWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKMLQPAEGSKIN*
Ga0075423_1002788073300009162Populus RhizosphereMKATESTTANPTYWQLIFLQSKVNGASYNGEALARHNWDWPKETYLQRRLNRIKFLEPVERSKPL*
Ga0105061_101303923300009807Groundwater SandTESRLEKPSYWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKMLQPAEGSKIN*
Ga0105088_103345223300009810Groundwater SandMHETESQLERRSYWQLIFLQSKVNGAPYYGEALPGQSWDWPKDTYFQRRLHLIKMLQPAEGSKIN*
Ga0105058_109889813300009837Groundwater SandNKQAQREGRKIQKIESQLENRSYWQLIFRQSKVNGAPYNGEALPRQSWDWPKDTYFQRRLHLIKILQPAEGSKIN*
Ga0134088_1027659023300010304Grasslands SoilMQETESQLGKPSYWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKILEPAEGFKIN*
Ga0126372_1264894113300010360Tropical Forest SoilRLKKGKEGGTEMEQTDSENFKPSYWQLVFSQSKANGAPYHGELLPGRNWDWPKDTYLQRRLQQVRFFQPSDGSKLN*
Ga0120192_1000973913300012021TerrestrialVQETERQLKSPSYWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKILQPAQGSKIN*
Ga0137374_10004952163300012204Vadose Zone SoilMHETNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLQRVKFLQPADGSKFN*
Ga0137374_1003781173300012204Vadose Zone SoilMAMQETEPQLKKPSYWQLIFLQSKVNGAPYSGEALPGQSWDWPKDTYFQRRLNQFKILQHAEGSKIN*
Ga0137374_1011589343300012204Vadose Zone SoilMQETESQLEKPSYWQLIFLQSKVNGAPYNGEALPDQSWDWPKDTYFQRRLHLIKILEPAEGFKIN*
Ga0137374_1107818513300012204Vadose Zone SoilSCWQLIFLQSKVNGAPYNGETLPGESWDWPKDTYFQRRLRLIKILQSAEGFKVN*
Ga0137379_1040053623300012209Vadose Zone SoilMNETNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLQRVKFLQPADGSKYN*
Ga0137372_1034599743300012350Vadose Zone SoilMQETEPQLKKASYWQLIFLQSKVNGEPYKGEALPGQSWDWPRDTYFQRRLNLIKILQRAEGSKIN*
Ga0137367_1000544563300012353Vadose Zone SoilMHETNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLQRVKFFQPADGYKVN*
Ga0137367_1003161183300012353Vadose Zone SoilMQETEPQLKKASYWQLIFLQSKVNGAPYKGEALPGQSWDWPRDTYFQRRLNLIKILQRAEGSKIN*
Ga0137367_1056233813300012353Vadose Zone SoilMQAIESQLGKPSYWQVIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLMKILQPEGFKIN*
Ga0137369_1006080833300012355Vadose Zone SoilMHETNSELAKPSYWQLIFLQSKVNGATYNGERLPGRNWDWPKGTYLQRRLQRTKFLQPANDCRVN*
Ga0137369_1015532023300012355Vadose Zone SoilMEMRETDSQFGKVSSWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHQIKFLQPAESSKIN*
Ga0137369_1049895213300012355Vadose Zone SoilGEMAMQETEPQLKKPSYWQLIFLQSKVNGAPYSGEALPGQSWDWPKDTYFQRRLNQFKILQHAEGSKIN*
Ga0137375_1023381533300012360Vadose Zone SoilMKPIESPTGNPNWQLIFLQSKVNGATYNDEKYPGSNWDWPKDTYLQRRLSRIKFSSPVERSKPESSSRTVT*
Ga0157345_100984913300012498Arabidopsis RhizosphereMKSTESDVEKPSYWQLVFLQSKVNGAAYNGEELPGRNWDWPKDTYLQRRRRNHKFSHPAEHSKLN*
Ga0137404_1218051813300012929Vadose Zone SoilEGGTEMKATESTTANPTYWQLIFLQSKVNGASYNGEALARHNWDWPKETYLQRRLHRINFLEPVERSKPH*
Ga0153915_1041419013300012931Freshwater WetlandsMKPTENELEKPSYWRLIFMQSKVNGAPYSGEELPGRHWDWPKDTYLQRRLRKQRYFQPAQEFNLN*
Ga0075322_104944423300014311Natural And Restored WetlandsVKATENEMDKPSYWQLVFLQSKVNGAPYNGEELPGRHWDWPKDTYLQRRLRQHRFFQPAEQFNLN*
Ga0132258_1172641923300015371Arabidopsis RhizosphereMKSSEGEMAKPSYWQLIFLQSKVNGGNYTGEELPGRNWDWPKDTYLQRRLHQAKYLQVPENSRLN*
Ga0134083_1055911323300017659Grasslands SoilMQETESQLGKPSYWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKILEPAEEF
Ga0187825_1000282753300017930Freshwater SedimentMKPTENELEKPSYWQLIFMQSKVNGAPYSGEELPGRHWDWPKDTYLQRRLRKQRYFQPAQEFNLN
Ga0187822_1020079213300017994Freshwater SedimentTDMKPTENELEKPSYWQLIFMQSKVNGAPYSGEELPGRHWDWPKDTYLQRRLRKQRYFQPAQEFNLN
Ga0184610_111109513300017997Groundwater SedimentMHETNSELAKPSYWQRIFLQSKVNGGTYNGETLPGRNWDWPKDTYLQRRLQRTKFLQPADGSRDN
Ga0184610_127901613300017997Groundwater SedimentMTQTDSENSKPSYWQLVFSQSKANGAPYNGETLPGRNWDWPKETYLQRRLQRVRFLQPSDGAKMN
Ga0184605_1011776533300018027Groundwater SedimentMKAIESPTENPNWQLIFLQSKVNGATYNDEKFPGSNWDWPKDTYLQRRLSRIKFSSPVERSKP
Ga0184608_1004382213300018028Groundwater SedimentMNQTNLENSKPSYWQLVFSQSKANGAPYNGEMLPGRNWDWPRDTYLQRRLQRVRFLQPSDGAKMN
Ga0184608_1009550223300018028Groundwater SedimentMYETNSELAKPSYWQRIFLQSKVNGGTYNGETLPGRNWDWPKDTYLQRRLQRTKFLQPAD
Ga0184634_1000091863300018031Groundwater SedimentMNQTDSENSKPSYWQLIFSQSKANGAPYNGETIPGRNWDWPKDTYLQRRLQRVRFLQPSDGAKMN
Ga0184621_1006972623300018054Groundwater SedimentMNQTNLENSKPSYWQLVFSQSKANGAPYNGEMLPGRNWDWPRDTYLQRRLQRVRFLQPSEGAKMN
Ga0184621_1009946213300018054Groundwater SedimentMRETDSQFGTLSSWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLQQIKFLQPAEGSKIN
Ga0184619_1005161413300018061Groundwater SedimentSSWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHQIKFLQPAEGSKIN
Ga0184619_1017065013300018061Groundwater SedimentMHETNSELAKPSYWQLIFLQSKVNGGTYNGETLPGRNWDWPKDTYLQRRLQRTKFLQPTDGSRDN
Ga0184618_1000803123300018071Groundwater SedimentMRDTDSQFGKLSSWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHQIKFLQPAEGSKIN
Ga0184618_1001568723300018071Groundwater SedimentMYETNSELAKPSYWQLIFLQSKVNGGTYNGETLPGRNWDWPKDTYLQRRLQRTKFLQPADGSRDN
Ga0184618_1021741513300018071Groundwater SedimentYPAHNETEGVTEMKAIESPTENPNWQLIFLQSKVNGATYNDEKFPGSNWDWPKDTYLQRRLSRIKFSRPVERSKP
Ga0184632_1001034743300018075Groundwater SedimentMNQTDLENSKPSYWQLVFSQSKANGAPYNGEMLPGRNWDWPRDTYLQRRLQRVRFLQPSEGAKMN
Ga0184632_1025354913300018075Groundwater SedimentMRETDSQFGKLSSWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHQIKFLQPAEGSKIN
Ga0184632_1047500423300018075Groundwater SedimentMKAIESPTENPNWQLIFLQSKVNGATYNDEKFPGSNWDWPKDTYLQRRLSRIKFS
Ga0184609_1001791333300018076Groundwater SedimentMHETNSELAKPSYWQLIFLQSKVNGGTYNGETLPGRNWDWPKDTYLQRRLQRTKFFPPADGSRDN
Ga0184609_1015433613300018076Groundwater SedimentMHETNSELAKPSYWQLIFLQSKVNGATYNGERLPGRNWDWPKDTYLQRRLQRTKFLQPRD
Ga0184609_1020645213300018076Groundwater SedimentMNQTNLENSKPSYWQLVFSQSKANGAPYNGEMLPGRNWDWPRDTYLQRRLQRVRFLQPADGAKMN
Ga0184609_1023527133300018076Groundwater SedimentMKAIESPTGNPNWQLIFLQSKVNGATYNGEKFPGRNWDWPKDTYLQRRLSRIKFLSPVERSKP
Ga0184609_1042332113300018076Groundwater SedimentSPWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKILQPAEGSKIN
Ga0184612_1001039053300018078Groundwater SedimentMNQTDSENSKPSYWQLIFSQSKANGAPYNGEMLPGRNWDWPRDTYLQRRLQRVRFLQPSDGAKMN
Ga0184639_1001599243300018082Groundwater SedimentMTQTDSENSKPSYWQLIFSQSKANGAPYNGETLPGRNWDWPKETYLQRRLQRVRFLQPSDGAKMN
Ga0190265_1025032623300018422SoilMKSTETETHKPSYWQLIFLQSKVNGASYNGEALPGHNWVWPKNTYLQRRLHQARYLQPGDNSKFN
Ga0190265_1155796823300018422SoilSYWQLIFLQSKVNGASYKGEGLPGHNWNWPKDTYLQRRLHRAGYLQPDDNSKLN
Ga0190265_1274424913300018422SoilETQKPSYWQLIFLQSKVNGASYNGERLPGHNWNWPQDTYLQRRLHQARYLQPNDNSKLN
Ga0190264_1007222413300019377SoilKPSYWQLIFLQSKVNGASYNGERLPGHNWNWPRDTYLQRRLHQARYLKPSDNSKLN
Ga0137408_115884813300019789Vadose Zone SoilMKATESTTANPTYWQLIFLQSKVNGASYNGEALARHNWDWPKETYLQRRLHRIKFLEPVERSKPH
Ga0193739_108555313300020003SoilMQETDSQFGKLSSWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHQIKFLQPAEGSKIN
Ga0210378_1005173923300021073Groundwater SedimentMNQPNLENSKPSYWQLIFSQSKANGAPYNGEMLPGRNWDWPRDTYLQRRLQRVRFLQPSEGAKMN
Ga0210378_1007796033300021073Groundwater SedimentMKAIESPTGNPNWQLIFLQSKVNGATYNGEKFPGCNWDWPKDTYLQRRLNRIKFSSHVERSKP
Ga0210382_1001971223300021080Groundwater SedimentMHETNSELAKPSYWQLIFLQSKVNGGTYNGETLPGRNWDWPKDTYLQRRLQRTKFFQPADGSRDN
Ga0209470_106128323300026324SoilMNQTNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLQRVKFFQPADGYKVN
Ga0256867_1011640813300026535SoilMKTTETDTAKPSYWQLIFLQSKVNGASYGGDELPGRNWNWPKDTYLQRRLERTKSLQLAQECKLN
Ga0209157_108782733300026537SoilMNETNTELGKPSYWQLIFLQSKVNGAAYNGEKLPGRNWDWPKDTYFQRRLQRVKFFQPADGYKVN
Ga0209875_100621313300027209Groundwater SandRSYWQLIFLQSKVNGAPYYGEALPGQSWDWPKDTYFQRRLHLIKMLQPAEGSKIN
Ga0209818_108732523300027637Agricultural SoilKTTEAEMAKPSYWQLIFLQSKVNGARYSGEALPGRNWDWPKNTYLQRRLHQARYLQVSDASKLN
Ga0209387_100220243300027639Agricultural SoilMKTTEAEMAKPSYWQLIFLQSKVNGARYSGEALPGRNWDWPKNTYLQRRLHQARYLQVSDASKLN
Ga0209983_114414113300027665Arabidopsis Thaliana RhizosphereMKTAESPIRKPSYWQFIFLQSKVNGASYDGEGLPRQNWEWPKNTYFQRRLSRIKVRSVDRVPVN
Ga0209971_100383513300027682Arabidopsis Thaliana RhizosphereMKAMEGETFKPSYWQLIFLQSKVNGAAYNGEDLPGRNWDWPKDTYLQKRLHQARFLQPSEHSKMN
Ga0209971_103362213300027682Arabidopsis Thaliana RhizosphereMKTAESPIRKPSYWQFIFLQSKVNGASYNGEGLPRQNWEWPKNTYFQRRLSRIKVRSVDR
Ga0209998_1001339513300027717Arabidopsis Thaliana RhizosphereMKTAESPIRKPSYWQFIFLQSKVNGASYNGEGLPRQNWEWPKNTYFQRRLSRIKVRSVDRVPVN
Ga0209814_1003747323300027873Populus RhizosphereMKATESTTANPTYWQLIFLQSKVNGASYNGEALARHNWDWPKETYLQRRLHRIKFLEPVERSKPL
Ga0209814_1009861133300027873Populus RhizosphereMRMRMQLKKDSVKTKKSQSGKPSCWQLIFLQSKVNGAPYNGETLPGESWDWPKDTYLQRRLHRIKILQSAEGFKVN
Ga0209814_1012663023300027873Populus RhizosphereMQETQPQLKNPSYWQLIFLQSKVNGAPYRGEALPGQSWDWPKNTYFQRRLHLIKILQPAEGSKIN
Ga0209814_1027377813300027873Populus RhizosphereMNDTQTELGKPSYWQLIFLQSKVNGAAYNGETLPGRNWDWPKGTYLQRRLQRVKFLQPADGSKDN
Ga0209974_10000627133300027876Arabidopsis Thaliana RhizosphereMKTAESPIRKPSYWQFIFLQSKVNGASYNGEGLPRQNWEWPKNTYFQRRLSRTKLGPLNAYR
Ga0209382_1004715843300027909Populus RhizosphereMRTTEAEMAKPSYWQLIFLQSKVNGASYGGEALPGRNWDWPKDTYLQRRLHQARYLQISDASRLN
Ga0209382_1149087413300027909Populus RhizosphereMRMRMQLKKDSVKTKKSQSGKPSCWQLIFLQSKVNGAPYNGEALPGQSWDWPKDTYFQRRLHLIKILQPAESLKVN
Ga0307302_1067446613300028814SoilMHETNSELAKPSYWQLIFLQSKVNGGTYNGETLPGRNWDWPKDTYLQRRLQRTKFL
(restricted) Ga0255310_1010241223300031197Sandy SoilMKSAEGEMARPSYWQLIFLQSKVNGANYNGEELPGRNWDWPKDTFLQRRLHLAKYLQVTENTRLN
Ga0310892_1088998113300031858SoilMKSPEGEMAKPSYWQLIFLQSKVNGGNYNGEELPGRNWDWPKDTYLQRRLHQARYLQV
Ga0316628_10059099823300033513SoilMKPTENELEKPSYWQLIFTQSKVNGAPYSGEELPGRHWDWPKDTYLQRRLRKQRYFQPAQESNLN
Ga0364942_0099012_604_8013300034165SedimentMKTMENDLGKPSYWQLIFLQSKVNGAQYSGEELPGRNWDWPKDTYLQRRRHQDRWLQPADHSQLN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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