Metagenome Family F074264

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074264
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	60 residues
Representative Sequence	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Number of Associated Samples	78
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.42 %
% of genes near scaffold ends (potentially truncated)	62.18 %
% of genes from short scaffolds (< 2000 bps)	84.87 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.193 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.017 % of family members)
Environment Ontology (ENVO)	Unclassified (61.345 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.622 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.05% β-sheet: 3.51% Coil/Unstructured: 75.44%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13560	HTH_31	5.88
PF03102	NeuB	4.20
PF06411	HdeA	4.20
PF16868	NMT1_3	1.68
PF00239	Resolvase	1.68
PF14087	DUF4267	1.68
PF00816	Histone_HNS	1.68
PF00756	Esterase	0.84
PF04392	ABC_sub_bind	0.84
PF02371	Transposase_20	0.84
PF13333	rve_2	0.84
PF10108	DNA_pol_B_exo2	0.84
PF13482	RNase_H_2	0.84
PF00589	Phage_integrase	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2089	Sialic acid synthase SpsE, contains C-terminal SAF domain	Cell wall/membrane/envelope biogenesis [M]	4.20
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.68
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.68
COG2916	DNA-binding protein H-NS	Transcription [K]	1.68
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.84
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.19 %
Unclassified	root	N/A	16.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.19 %
Unclassified	root	N/A	16.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.19 %
Unclassified	root	N/A	16.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.15 %
Unclassified	root	N/A	16.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	66.39 %
Unclassified	root	N/A	16.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	48.74 %
Unclassified	root	N/A	16.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.68 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.84 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	47.90 %
Unclassified	root	N/A	16.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.68 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.84 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.84 %
Francisellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	47.90 %
Unclassified	root	N/A	16.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.68 %
Campylobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae	0.84 %
Francisella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae → Francisella	0.84 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	47.90 %
Unclassified	root	N/A	16.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.68 %
Francisella orientalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae → Francisella → Francisella orientalis	0.84 %
Campylobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter	0.84 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	47.90 %
Unclassified	root	N/A	16.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.68 %
Campylobacter concisus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter concisus	0.84 %
Francisella orientalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae → Francisella → Francisella orientalis	0.84 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1190784	Not Available	1278	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1073382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1017243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1155	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1022059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1007	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10066127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	920	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10078947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10091186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1015990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1426	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1024658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1028175	Not Available	1043	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10009256	All Organisms → cellular organisms → Bacteria → Proteobacteria	2353	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10035087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1164	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1016249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1046	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1035243	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1052510	Not Available	638	Open in IMG/M
3300000955\|JGI1027J12803_104480735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300004463\|Ga0063356_100983454	Not Available	1202	Open in IMG/M
3300004633\|Ga0066395_10270452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae → Francisella → Francisella orientalis	918	Open in IMG/M
3300004633\|Ga0066395_10337161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300005332\|Ga0066388_101133820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1328	Open in IMG/M
3300005332\|Ga0066388_101877694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1068	Open in IMG/M
3300005467\|Ga0070706_100487797	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300005471\|Ga0070698_100368477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1368	Open in IMG/M
3300005713\|Ga0066905_100343856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1189	Open in IMG/M
3300005713\|Ga0066905_100563379	All Organisms → cellular organisms → Bacteria → Proteobacteria	958	Open in IMG/M
3300005713\|Ga0066905_101017386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300005764\|Ga0066903_103310888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300005764\|Ga0066903_105801262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300005764\|Ga0066903_108719431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300009792\|Ga0126374_10461632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	905	Open in IMG/M
3300010047\|Ga0126382_11931579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300010358\|Ga0126370_10906922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300010358\|Ga0126370_11766627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300010360\|Ga0126372_11708300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300010362\|Ga0126377_13339150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300010366\|Ga0126379_10757917	Not Available	1068	Open in IMG/M
3300010366\|Ga0126379_11144637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	884	Open in IMG/M
3300010376\|Ga0126381_102416448	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300010863\|Ga0124850_1000351	All Organisms → cellular organisms → Bacteria	9389	Open in IMG/M
3300010863\|Ga0124850_1010924	Not Available	2886	Open in IMG/M
3300012971\|Ga0126369_10085861	All Organisms → cellular organisms → Bacteria	2806	Open in IMG/M
3300012971\|Ga0126369_10322595	Not Available	1555	Open in IMG/M
3300012971\|Ga0126369_11926019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300016270\|Ga0182036_10217152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1412	Open in IMG/M
3300016294\|Ga0182041_10297565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1336	Open in IMG/M
3300016294\|Ga0182041_10463746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1091	Open in IMG/M
3300016319\|Ga0182033_10845108	Not Available	808	Open in IMG/M
3300016341\|Ga0182035_10128173	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300016341\|Ga0182035_11505115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300016371\|Ga0182034_10905167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	759	Open in IMG/M
3300016422\|Ga0182039_11491799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300021476\|Ga0187846_10418286	Not Available	550	Open in IMG/M
3300027527\|Ga0209684_1041440	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300027646\|Ga0209466_1099514	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031543\|Ga0318516_10028653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2919	Open in IMG/M
3300031544\|Ga0318534_10476733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300031545\|Ga0318541_10448476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300031545\|Ga0318541_10832236	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter concisus	515	Open in IMG/M
3300031546\|Ga0318538_10031379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2478	Open in IMG/M
3300031546\|Ga0318538_10143166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1259	Open in IMG/M
3300031549\|Ga0318571_10433931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300031564\|Ga0318573_10061274	Not Available	1860	Open in IMG/M
3300031573\|Ga0310915_10016785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4375	Open in IMG/M
3300031573\|Ga0310915_10064103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2404	Open in IMG/M
3300031573\|Ga0310915_10101234	Not Available	1947	Open in IMG/M
3300031668\|Ga0318542_10508171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300031679\|Ga0318561_10101695	All Organisms → cellular organisms → Bacteria → Proteobacteria	1511	Open in IMG/M
3300031679\|Ga0318561_10157801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1220	Open in IMG/M
3300031680\|Ga0318574_10047180	Not Available	2253	Open in IMG/M
3300031713\|Ga0318496_10187497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1135	Open in IMG/M
3300031719\|Ga0306917_10046340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2900	Open in IMG/M
3300031719\|Ga0306917_11355657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300031724\|Ga0318500_10049119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1783	Open in IMG/M
3300031744\|Ga0306918_10745970	All Organisms → cellular organisms → Bacteria → Proteobacteria	765	Open in IMG/M
3300031744\|Ga0306918_11362246	Not Available	544	Open in IMG/M
3300031744\|Ga0306918_11412814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300031763\|Ga0318537_10089988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300031768\|Ga0318509_10065556	Not Available	1893	Open in IMG/M
3300031770\|Ga0318521_10847420	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300031780\|Ga0318508_1079014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	898	Open in IMG/M
3300031794\|Ga0318503_10234506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300031797\|Ga0318550_10251995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300031798\|Ga0318523_10110486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1354	Open in IMG/M
3300031821\|Ga0318567_10183291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300031831\|Ga0318564_10463251	Not Available	552	Open in IMG/M
3300031833\|Ga0310917_10020613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3783	Open in IMG/M
3300031833\|Ga0310917_10248240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1197	Open in IMG/M
3300031833\|Ga0310917_10256517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1177	Open in IMG/M
3300031833\|Ga0310917_10511678	Not Available	816	Open in IMG/M
3300031890\|Ga0306925_11177762	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300031893\|Ga0318536_10271087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300031896\|Ga0318551_10032994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2523	Open in IMG/M
3300031897\|Ga0318520_10021814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3066	Open in IMG/M
3300031910\|Ga0306923_11476394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300031910\|Ga0306923_11493016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300031910\|Ga0306923_12004664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300031912\|Ga0306921_11679440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	687	Open in IMG/M
3300031941\|Ga0310912_10080915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2358	Open in IMG/M
3300031941\|Ga0310912_10459520	Not Available	992	Open in IMG/M
3300031941\|Ga0310912_10574572	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300031942\|Ga0310916_10376187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1207	Open in IMG/M
3300031942\|Ga0310916_10719241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	844	Open in IMG/M
3300031942\|Ga0310916_11177403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300031946\|Ga0310910_10224952	All Organisms → cellular organisms → Bacteria → Proteobacteria	1461	Open in IMG/M
3300031947\|Ga0310909_10776512	Not Available	792	Open in IMG/M
3300032001\|Ga0306922_10694405	Not Available	1071	Open in IMG/M
3300032035\|Ga0310911_10051889	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300032044\|Ga0318558_10107598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1311	Open in IMG/M
3300032051\|Ga0318532_10054027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1381	Open in IMG/M
3300032051\|Ga0318532_10205054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300032055\|Ga0318575_10468676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300032059\|Ga0318533_10031697	All Organisms → cellular organisms → Bacteria → Proteobacteria	3431	Open in IMG/M
3300032063\|Ga0318504_10091070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1353	Open in IMG/M
3300032063\|Ga0318504_10130487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1146	Open in IMG/M
3300032076\|Ga0306924_11759954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300032090\|Ga0318518_10028681	Not Available	2526	Open in IMG/M
3300032261\|Ga0306920_100017233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9969	Open in IMG/M
3300032261\|Ga0306920_100990771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1224	Open in IMG/M
3300032261\|Ga0306920_101944855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.16%
Plants	Host-Associated → Plants	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.32%
Cave	Environmental → Terrestrial → Cave	0.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.87%
Loam	Environmental → Terrestrial → Soil → Loam	13.45%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	73.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.68%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	11.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_12531630	2124908045	Soil	LVKIAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
AP72_2010_repI_A01DRAFT_10733822	3300000579	Forest Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAR*
AF_2010_repII_A01DRAFT_10172432	3300000580	Forest Soil	AACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYALSTKSPEQSRPLIDVM*
AF_2010_repII_A01DRAFT_10220594	3300000580	Forest Soil	CAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLANN*
AF_2010_repII_A1DRAFT_100661274	3300000597	Forest Soil	LQDCFRGSSVCALVKIAESEMHNLTCAACGRALAETSAWRSSGERFYCNDFCAEAEETDIDLIRYAVSTKSPEHLAH*
AF_2010_repII_A1DRAFT_100789473	3300000597	Forest Soil	EMHNLTCAACGRALAXTSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH*
AF_2010_repII_A1DRAFT_100911861	3300000597	Forest Soil	MHNLTCAACGRALVETSAWKGSGERFYCNDFCAEAEETDINLIRYAL
AF_2010_repII_A100DRAFT_10159906	3300000655	Forest Soil	SSVCALVKIAESEMHNLTCAACGRALAETSAWRSSGERFYCNDFCAEAEETDIDLIRYAVSTKSPEHLAH*
AF_2010_repII_A100DRAFT_10246583	3300000655	Forest Soil	MHNLTCAACGRALVETSAWKGSGERFYCNDFCAEAEETDINLIRYALSTKSPEQSRPLIDVM*
AF_2010_repII_A100DRAFT_10281751	3300000655	Forest Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAL
AF_2010_repII_A001DRAFT_100092562	3300000793	Forest Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLANN*
AF_2010_repII_A001DRAFT_100350872	3300000793	Forest Soil	LVKIAESEMHNLTCAACGRALVETSAWKGSGERFYCNDFCAEAEETDINLIRYALSTKSPEQSRPLIDVM*
AP72_2010_repI_A100DRAFT_10162492	3300000837	Forest Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH*
AP72_2010_repI_A001DRAFT_10352431	3300000893	Forest Soil	LVKIAESEMHNLTCAACGRALAETSAWRSSGERFYCNDFCAEAEETDIDLIRYAVSTKSPEHLAH*
AP72_2010_repI_A001DRAFT_10525101	3300000893	Forest Soil	MDNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHL
JGI1027J12803_1044807353	3300000955	Soil	DCFRGSSVCALVKIAKGEMHNLICAACGRALAETSAWKGSGERFYCNDFCAEAEEIDINLIRYAVSIKSPEHLAH*
Ga0063356_1009834542	3300004463	Arabidopsis Thaliana Rhizosphere	MAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEEIDINLIRYAVSIKSPEHLAH*
Ga0066395_102704521	3300004633	Tropical Forest Soil	MHNLTCAACGRALAETSASKGSGERFYCNDFCAEAEETDINLIRYALSTKSPEQSRPRIDVM*
Ga0066395_103371612	3300004633	Tropical Forest Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYALSTKSPEHLAH*
Ga0066388_1011338203	3300005332	Tropical Forest Soil	MHNLTCAACGRALAETSAWRSSGERFYCNDFCAEAEETDIDLIRYAVSTKSPEHLAH*
Ga0066388_1018776942	3300005332	Tropical Forest Soil	MHNLTCAACGRALAETSAWKGSGERFFCNDFCAEAEETDINLIRYAVSTKSP
Ga0070706_1004877971	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPELSPTN*
Ga0070698_1003684772	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LVKIAKSEMHNLICAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPELSPTN*
Ga0066905_1003438563	3300005713	Tropical Forest Soil	LVKIAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAR*
Ga0066905_1005633792	3300005713	Tropical Forest Soil	MDNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAR*
Ga0066905_1010173861	3300005713	Tropical Forest Soil	CALVKIAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYALSTKSPEQSRPLIDVM*
Ga0066903_1033108882	3300005764	Tropical Forest Soil	MHNLTCAACGRVLAETSAWKGSGERLYCNDFCAEAEETGINLIGYAVGTKLPEHLAH*
Ga0066903_1058012623	3300005764	Tropical Forest Soil	LQDCFRGSSVCAFVKIAESEMHNLTCAACGRALAETSAWKSSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAH*
Ga0066903_1087194311	3300005764	Tropical Forest Soil	CGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLVH*
Ga0126374_104616322	3300009792	Tropical Forest Soil	MLVATASVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERFFCNDFCAEAEETDINLIRYA
Ga0126382_119315791	3300010047	Tropical Forest Soil	ESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0126370_109069223	3300010358	Tropical Forest Soil	CALVKIAESEMHNLTCAACGRALAETSAWKGSGERFFCNDFCAEAEETDINLIRYALSTKSPEHLAH*
Ga0126370_117666272	3300010358	Tropical Forest Soil	MLVATASVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLANN*
Ga0126372_117083001	3300010360	Tropical Forest Soil	TVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERFFCNDFCAEAEETDINLIRYALSTKSPEHLAH*
Ga0126377_133391502	3300010362	Tropical Forest Soil	TCAACGRTLAETYAWKGSGERFYCNDFCAEAEETYNNLIRYAVSTKSPESASTQKSLQ*
Ga0126379_107579172	3300010366	Tropical Forest Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLA
Ga0126379_111446372	3300010366	Tropical Forest Soil	CAFVKIAESEMDNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAR*
Ga0126381_1024164481	3300010376	Tropical Forest Soil	LVKIAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEETDINLIRYAVSTKSPEHLAH*
Ga0124850_100035115	3300010863	Tropical Forest Soil	LVKIAESEMHNLTCAACGRALAETSAWKGSGERFFCNDFCAEAEETDINLIRYALSTKSPEHLAH*
Ga0124850_10109242	3300010863	Tropical Forest Soil	LVKIAESEMHNLICAACGRALAETSAWRSSGERFYCNDFCAEAEETDIDLIRYAVSTKSPEHLAH*
Ga0126369_100858616	3300012971	Tropical Forest Soil	MDNLTCAACGRALAETSAWKGGGERFYCNDFCAEAEETYINLIRYAVSTKSPEHL
Ga0126369_103225953	3300012971	Tropical Forest Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVS
Ga0126369_119260191	3300012971	Tropical Forest Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAV
Ga0182036_102171524	3300016270	Soil	FRGSSVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0182041_102975654	3300016294	Soil	AESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLA
Ga0182041_104637461	3300016294	Soil	ASLQDCFRGSSVCAFVKIAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLANN
Ga0182033_108451081	3300016319	Soil	MHNLICAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVST
Ga0182035_101281731	3300016341	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEH
Ga0182035_115051151	3300016341	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVST
Ga0182034_109051674	3300016371	Soil	VCAFVKIAESEMHNLTCAACGRSLAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAHQLM
Ga0182039_114917991	3300016422	Soil	ACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLANN
Ga0187846_104182863	3300021476	Biofilm	MDNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVN
Ga0209684_10414402	3300027527	Tropical Forest Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYALSTKSPEHLAH
Ga0209466_10995141	3300027646	Tropical Forest Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEVEETDINLIRYAVSTKSPEHLAH
Ga0318516_100286535	3300031543	Soil	MHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0318534_104767333	3300031544	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0318541_104484763	3300031545	Soil	GRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0318541_108322361	3300031545	Soil	MHNLTCAACGRAVAETSAWKGSGERLYCNDFCAEAEETGINLIRYAVSTKSPEHLAH
Ga0318538_100313795	3300031546	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0318538_101431663	3300031546	Soil	VKIAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0318571_104339311	3300031549	Soil	EMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0318573_100612743	3300031564	Soil	MHDLTCAACGRALAATSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0310915_1001678510	3300031573	Soil	CFRGSSVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0310915_100641037	3300031573	Soil	ESEMHNLTCAACGRSLAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAHQLM
Ga0310915_101012343	3300031573	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYA
Ga0318542_105081711	3300031668	Soil	SSVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0318561_101016951	3300031679	Soil	MDNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAR
Ga0318561_101578011	3300031679	Soil	HNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0318574_100471802	3300031680	Soil	MHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0318496_101874974	3300031713	Soil	VKIAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0306917_100463405	3300031719	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLANN
Ga0306917_113556571	3300031719	Soil	LTCAACGRSLAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAR
Ga0318500_100491195	3300031724	Soil	MHNLTCAACGRALAATSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0306918_107459702	3300031744	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETGINLIRYAVSTKSPEHLAH
Ga0306918_113622461	3300031744	Soil	LVKIAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0306918_114128141	3300031744	Soil	MHNLTCAACGRVLAETAAWKGSGERFYCNDFCAEAEETDINLNRYAVSTKSPEHLAH
Ga0318537_100899881	3300031763	Soil	ACGRALAETSAWKGSGERFYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0318509_100655564	3300031768	Soil	MHNLTCAACGRSLAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAHQLM
Ga0318521_108474201	3300031770	Soil	MHNLTCAACGRALAETSAWKGSSKRFYCNDFCAEAEETDINPIRYAVSTKSPE
Ga0318508_10790141	3300031780	Soil	CALVKIAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0318503_102345061	3300031794	Soil	AACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0318550_102519951	3300031797	Soil	QSASLQDCFRGSSVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0318523_101104861	3300031798	Soil	IAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0318567_101832911	3300031821	Soil	RGSSVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0318564_104632511	3300031831	Soil	MHNLTCAACGRSLAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0310917_100206131	3300031833	Soil	CFRGSSVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0310917_102482401	3300031833	Soil	LQDCLRGSSVCAFVKIAESEMHNLTCAACGRSLAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAHQLM
Ga0310917_102565175	3300031833	Soil	CGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0310917_105116781	3300031833	Soil	MHNLICAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTK
Ga0306925_111777622	3300031890	Soil	LVKIAESEMHNLTCAACGRALAETSAWKGSSERFYCNDFCAEAEETDINPIRYAVSTKSPEHLAR
Ga0318536_102710871	3300031893	Soil	SEMHNLTCAACGRALAATSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0318551_100329941	3300031896	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLA
Ga0318520_100218147	3300031897	Soil	HNLTCAACGRALAETFAWKGGGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0306923_114763941	3300031910	Soil	ESEMHDLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0306923_114930161	3300031910	Soil	MHNLTACGRALAETSAWKGSGERFYYNDFCAEAEETDINLIRYAVSTKSPEHLAR
Ga0306923_120046643	3300031910	Soil	AVCGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAHQLM
Ga0306921_116794401	3300031912	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAKETDINLIRYAVSTKSPEHLAR
Ga0310912_100809151	3300031941	Soil	EMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0310912_104595201	3300031941	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTK
Ga0310912_105745721	3300031941	Soil	MHDLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0310916_103761873	3300031942	Soil	CFRGSSVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0310916_107192412	3300031942	Soil	SEMHNLTCAACGRSLAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAHQLM
Ga0310916_111774032	3300031942	Soil	CYCGSSVCAFVKIAESEMDNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAR
Ga0310910_102249523	3300031946	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYVLSTKSPEHLANN
Ga0310909_107765121	3300031947	Soil	MHNLICAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKS
Ga0306922_106944052	3300032001	Soil	LVKIAESEMHNLICAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0310911_100518891	3300032035	Soil	SVCALVKIAESEMHNLICAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPRSAG
Ga0318558_101075984	3300032044	Soil	CFRGSSVCAFVKIAESEMHNLTCAACGRALAATSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0318532_100540274	3300032051	Soil	SVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0318532_102050541	3300032051	Soil	GRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAR
Ga0318575_104686761	3300032055	Soil	SSVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEEADINLIRYAVSTKSPEHLAH
Ga0318533_100316974	3300032059	Soil	MHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETYINLIRYAVSTKSPEHLAR
Ga0318504_100910703	3300032063	Soil	MHNLTCAACGRALAETSAWKGSGERLYCNDFCAEAEETGINLIRYAVSTKSPEHLAH
Ga0318504_101304874	3300032063	Soil	SVCALVKIAESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0306924_117599541	3300032076	Soil	CALVKIAESEMHNLTACGRALAETSAWKGSGERFYYNDFCAEAEETDINLIRYAVSTKSPEHLAR
Ga0318518_100286815	3300032090	Soil	MHNLICAACGRALAETSAWKGSGERFYCNDFCAEAEETDINLIRYAVSTKSPEHLAH
Ga0306920_10001723311	3300032261	Soil	MHNLTCAACGRALAETSAWKGSSERFYCNDFCAEAEETDINPIRYAVSTKSPEHLAR
Ga0306920_1009907713	3300032261	Soil	LVKIAESEMHNLTCAACGRVLAETAAWKGSGERFYCNDFCAEAEETDINLNRYAVSTKSPEHLAH
Ga0306920_1019448552	3300032261	Soil	ESEMHNLTCAACGRALAETSAWKGSGERFYCNDFCAEAKETDINLIRYAVSTKSPEHLAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074264

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences