Metagenome / Metatranscriptome Family F074267

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074267
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	95 residues
Representative Sequence	DPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Number of Associated Samples	82
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.71 %
% of genes near scaffold ends (potentially truncated)	45.38 %
% of genes from short scaffolds (< 2000 bps)	92.44 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.504 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (60.504 % of family members)
Environment Ontology (ENVO)	Unclassified (78.151 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (60.504 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.30% β-sheet: 8.08% Coil/Unstructured: 61.62%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00042	Globin	2.52
PF04392	ABC_sub_bind	1.68
PF00083	Sugar_tr	1.68
PF14023	DUF4239	1.68
PF03411	Peptidase_M74	0.84
PF00486	Trans_reg_C	0.84
PF12860	PAS_7	0.84
PF01042	Ribonuc_L-PSP	0.84
PF01844	HNH	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	2.52
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.68
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.84
COG3770	Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.50 %
Unclassified	root	N/A	39.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.50 %
Unclassified	root	N/A	39.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.50 %
Unclassified	root	N/A	39.50 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.78 %
Unclassified	root	N/A	39.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	51.26 %
Unclassified	root	N/A	39.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	45.38 %
Unclassified	root	N/A	39.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	24.37 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	21.01 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1044018	Not Available	689	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10069793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10062728	Not Available	813	Open in IMG/M
3300004267\|Ga0066396_10107851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300004633\|Ga0066395_10319301	Not Available	854	Open in IMG/M
3300005363\|Ga0008090_15416840	Not Available	502	Open in IMG/M
3300005363\|Ga0008090_15826994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	920	Open in IMG/M
3300005713\|Ga0066905_100831121	Not Available	803	Open in IMG/M
3300009792\|Ga0126374_10020565	All Organisms → cellular organisms → Bacteria	2882	Open in IMG/M
3300010043\|Ga0126380_10600490	Not Available	866	Open in IMG/M
3300010043\|Ga0126380_11998707	Not Available	530	Open in IMG/M
3300010048\|Ga0126373_12808617	Not Available	543	Open in IMG/M
3300010358\|Ga0126370_10659848	Not Available	913	Open in IMG/M
3300010358\|Ga0126370_11047656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300010361\|Ga0126378_13204596	Not Available	520	Open in IMG/M
3300010376\|Ga0126381_101145310	Not Available	1124	Open in IMG/M
3300010863\|Ga0124850_1077236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1000	Open in IMG/M
3300010863\|Ga0124850_1109702	Not Available	747	Open in IMG/M
3300010863\|Ga0124850_1128101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300010863\|Ga0124850_1130038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300010863\|Ga0124850_1135116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300010868\|Ga0124844_1214562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300012971\|Ga0126369_10340905	All Organisms → cellular organisms → Bacteria → Proteobacteria	1517	Open in IMG/M
3300016371\|Ga0182034_11378185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	616	Open in IMG/M
3300016387\|Ga0182040_10287711	Not Available	1251	Open in IMG/M
3300016404\|Ga0182037_10264022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1368	Open in IMG/M
3300016422\|Ga0182039_12121840	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300021560\|Ga0126371_10684232	Not Available	1174	Open in IMG/M
3300027654\|Ga0209799_1019651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1479	Open in IMG/M
3300027874\|Ga0209465_10087694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1520	Open in IMG/M
3300031543\|Ga0318516_10477206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300031545\|Ga0318541_10120096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1426	Open in IMG/M
3300031545\|Ga0318541_10149844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1279	Open in IMG/M
3300031546\|Ga0318538_10165029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1174	Open in IMG/M
3300031546\|Ga0318538_10459702	Not Available	689	Open in IMG/M
3300031561\|Ga0318528_10143269	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300031561\|Ga0318528_10270164	Not Available	912	Open in IMG/M
3300031561\|Ga0318528_10787516	Not Available	508	Open in IMG/M
3300031564\|Ga0318573_10436333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300031573\|Ga0310915_10083149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2133	Open in IMG/M
3300031573\|Ga0310915_10324037	Not Available	1090	Open in IMG/M
3300031573\|Ga0310915_10470152	Not Available	893	Open in IMG/M
3300031573\|Ga0310915_10682371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	725	Open in IMG/M
3300031668\|Ga0318542_10488610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300031679\|Ga0318561_10012708	All Organisms → cellular organisms → Bacteria	3719	Open in IMG/M
3300031680\|Ga0318574_10208563	Not Available	1123	Open in IMG/M
3300031681\|Ga0318572_10009113	All Organisms → cellular organisms → Bacteria	4629	Open in IMG/M
3300031681\|Ga0318572_10121490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1492	Open in IMG/M
3300031681\|Ga0318572_10475225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	744	Open in IMG/M
3300031713\|Ga0318496_10748891	Not Available	538	Open in IMG/M
3300031719\|Ga0306917_10083701	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300031719\|Ga0306917_10508099	Not Available	946	Open in IMG/M
3300031723\|Ga0318493_10888115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300031724\|Ga0318500_10128886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1175	Open in IMG/M
3300031724\|Ga0318500_10396812	Not Available	685	Open in IMG/M
3300031724\|Ga0318500_10475748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300031736\|Ga0318501_10093275	Not Available	1491	Open in IMG/M
3300031736\|Ga0318501_10109314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1388	Open in IMG/M
3300031744\|Ga0306918_10559115	Not Available	896	Open in IMG/M
3300031744\|Ga0306918_11176332	Not Available	592	Open in IMG/M
3300031747\|Ga0318502_10441851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	776	Open in IMG/M
3300031764\|Ga0318535_10036415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2000	Open in IMG/M
3300031768\|Ga0318509_10175822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1186	Open in IMG/M
3300031769\|Ga0318526_10081059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1279	Open in IMG/M
3300031770\|Ga0318521_10270055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	996	Open in IMG/M
3300031771\|Ga0318546_10475961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300031777\|Ga0318543_10123944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1123	Open in IMG/M
3300031777\|Ga0318543_10202411	Not Available	881	Open in IMG/M
3300031778\|Ga0318498_10186760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	941	Open in IMG/M
3300031778\|Ga0318498_10316510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300031781\|Ga0318547_10139137	Not Available	1420	Open in IMG/M
3300031782\|Ga0318552_10206374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	994	Open in IMG/M
3300031793\|Ga0318548_10112252	Not Available	1312	Open in IMG/M
3300031795\|Ga0318557_10402237	Not Available	629	Open in IMG/M
3300031796\|Ga0318576_10346945	Not Available	701	Open in IMG/M
3300031798\|Ga0318523_10458032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	632	Open in IMG/M
3300031805\|Ga0318497_10321749	Not Available	862	Open in IMG/M
3300031819\|Ga0318568_10144012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1453	Open in IMG/M
3300031821\|Ga0318567_10087465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1670	Open in IMG/M
3300031831\|Ga0318564_10365796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300031831\|Ga0318564_10388645	Not Available	611	Open in IMG/M
3300031833\|Ga0310917_10598852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	748	Open in IMG/M
3300031859\|Ga0318527_10164270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300031859\|Ga0318527_10280138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300031879\|Ga0306919_11280196	Not Available	555	Open in IMG/M
3300031890\|Ga0306925_10240299	All Organisms → cellular organisms → Bacteria → Proteobacteria	1952	Open in IMG/M
3300031890\|Ga0306925_11430101	Not Available	680	Open in IMG/M
3300031890\|Ga0306925_12177785	Not Available	516	Open in IMG/M
3300031893\|Ga0318536_10012298	All Organisms → cellular organisms → Bacteria	3711	Open in IMG/M
3300031893\|Ga0318536_10165855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1123	Open in IMG/M
3300031894\|Ga0318522_10141897	Not Available	903	Open in IMG/M
3300031897\|Ga0318520_10138210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1402	Open in IMG/M
3300031897\|Ga0318520_10649442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	657	Open in IMG/M
3300031910\|Ga0306923_10427185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1505	Open in IMG/M
3300031912\|Ga0306921_11059061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	911	Open in IMG/M
3300031912\|Ga0306921_11171301	Not Available	857	Open in IMG/M
3300031941\|Ga0310912_10301877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1239	Open in IMG/M
3300031946\|Ga0310910_10851441	Not Available	716	Open in IMG/M
3300031947\|Ga0310909_10141555	Not Available	1970	Open in IMG/M
3300031954\|Ga0306926_10341976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1850	Open in IMG/M
3300031954\|Ga0306926_10974778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1011	Open in IMG/M
3300032001\|Ga0306922_10402674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1465	Open in IMG/M
3300032008\|Ga0318562_10520874	Not Available	689	Open in IMG/M
3300032010\|Ga0318569_10108687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1258	Open in IMG/M
3300032039\|Ga0318559_10195712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	928	Open in IMG/M
3300032039\|Ga0318559_10581518	Not Available	522	Open in IMG/M
3300032042\|Ga0318545_10050079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1412	Open in IMG/M
3300032042\|Ga0318545_10274062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300032042\|Ga0318545_10375460	Not Available	512	Open in IMG/M
3300032044\|Ga0318558_10298311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	796	Open in IMG/M
3300032044\|Ga0318558_10607587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300032051\|Ga0318532_10056146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1356	Open in IMG/M
3300032052\|Ga0318506_10449448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300032054\|Ga0318570_10457139	Not Available	582	Open in IMG/M
3300032059\|Ga0318533_10987888	Not Available	617	Open in IMG/M
3300032076\|Ga0306924_10194678	All Organisms → cellular organisms → Bacteria	2327	Open in IMG/M
3300032076\|Ga0306924_10966197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	937	Open in IMG/M
3300032091\|Ga0318577_10546033	Not Available	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.76%
Loam	Environmental → Terrestrial → Soil → Loam	9.24%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	80.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.40%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	60.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.52%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10440181	3300000580	Forest Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPEARL
AF_2010_repII_A1DRAFT_100697932	3300000597	Forest Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRVPVPETGLD*
AF_2010_repII_A001DRAFT_100627281	3300000793	Forest Soil	MDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIMRHVNNKQDAAWCHDHGYAYYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRVPVPETGLD*
Ga0066396_101078511	3300004267	Tropical Forest Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD*
Ga0066395_103193012	3300004633	Tropical Forest Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPVLETRLD*
Ga0008090_154168401	3300005363	Tropical Rainforest Soil	MKKLIGAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSARLVRGRPQTANRVPVLETRLD*
Ga0008090_158269943	3300005363	Tropical Rainforest Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAASPRLVKGRPQTANSRVPVPETRLD*
Ga0066905_1008311212	3300005713	Tropical Forest Soil	MKKLIAASLIVCATIAVVSVAIVRHVNNKQDALWCHDHGYANYATKDGFCVGAGGKLIKVREVPSLRLVRGRPQTANRVPVPETRLD*
Ga0126374_100205655	3300009792	Tropical Forest Soil	MKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGGAPSPRLVRGRPQTANSRVPVPETRLD*
Ga0126380_106004901	3300010043	Tropical Forest Soil	MKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD*
Ga0126380_119987071	3300010043	Tropical Forest Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPVLETRLD*
Ga0126373_128086171	3300010048	Tropical Forest Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSLRLVRGRPQTANRVPVLETRLD*
Ga0126370_106598482	3300010358	Tropical Forest Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPVTKLANGKTHYGLRYFMTE*
Ga0126370_110476561	3300010358	Tropical Forest Soil	LIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRVPVPETRLD*
Ga0126378_132045961	3300010361	Tropical Forest Soil	MKKLIAATLIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPVLETRLD*
Ga0126381_1011453102	3300010376	Tropical Forest Soil	MKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVKGRPQTANSRVPVPETRLD*
Ga0124850_10772362	3300010863	Tropical Forest Soil	MKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD*
Ga0124850_11097022	3300010863	Tropical Forest Soil	MKKLIAAALIICTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD*
Ga0124850_11281011	3300010863	Tropical Forest Soil	CTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD*
Ga0124850_11300382	3300010863	Tropical Forest Soil	CTTIAVVAVTIIRHVNNKQDAAWCRDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD*
Ga0124850_11351161	3300010863	Tropical Forest Soil	TIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD*
Ga0124844_12145622	3300010868	Tropical Forest Soil	MKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD*
Ga0126369_103409051	3300012971	Tropical Forest Soil	TIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCIGAGGKLFKIGEAPSPRLVRGRPQTTNSRVPVPETRLD*
Ga0182034_113781852	3300016371	Soil	ASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0182040_102877113	3300016387	Soil	AALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVQGRPQTANRVPVLETRLD
Ga0182037_102640222	3300016404	Soil	DVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRDRPQTANSRAPVPETRLD
Ga0182039_121218402	3300016422	Soil	RRNRSEMKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVQGRPQTANRVPVLETRLD
Ga0126371_106842323	3300021560	Tropical Forest Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVCRPQTANRVPALETRLD
Ga0209799_10196513	3300027654	Tropical Forest Soil	VFSKVGMDVASRRGDPLKLRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRVPVPETRLD
Ga0209465_100876941	3300027874	Tropical Forest Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318516_104772062	3300031543	Soil	DPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRRTAVMLEFGAKCRGPTS
Ga0318541_101200961	3300031545	Soil	VFSKVGMDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0318541_101498441	3300031545	Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNHKQNVAWCYDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318538_101650293	3300031546	Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRRTAVMLEFGAKCRGPTS
Ga0318538_104597021	3300031546	Soil	KKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPVLETRLD
Ga0318528_101432694	3300031561	Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGE
Ga0318528_102701642	3300031561	Soil	MKKLIAAALIVCATIALVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPVLETRLD
Ga0318528_107875161	3300031561	Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPALETRLD
Ga0318573_104363331	3300031564	Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0310915_100831492	3300031573	Soil	MKKLIAAALIICTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0310915_103240372	3300031573	Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPVLETRLD
Ga0310915_104701522	3300031573	Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVVVAIVRHVNNKQDAAWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANTLPVLETRLD
Ga0310915_106823713	3300031573	Soil	AAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318542_104886102	3300031668	Soil	MKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318561_100127087	3300031679	Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRLTAVMLEFGAKSRGPTS
Ga0318574_102085632	3300031680	Soil	MKKLIAAALIICATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPALETRLD
Ga0318572_100091132	3300031681	Soil	MLRAAGDDSLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318572_101214903	3300031681	Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANTLPVLETRLD
Ga0318572_104752251	3300031681	Soil	GDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRDRPQTANSRAPVPETRLD
Ga0318496_107488912	3300031713	Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRG
Ga0306917_100837015	3300031719	Soil	MKKLIAAALIICATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPALETRLD
Ga0306917_105080993	3300031719	Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVQGRPQTANRVPVLETRLD
Ga0318493_108881151	3300031723	Soil	RAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318500_101288863	3300031724	Soil	MKKLIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0318500_103968121	3300031724	Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVGEVPSPRLVRGRPQTANRVPVLETRLD
Ga0318500_104757482	3300031724	Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVKGRPQTANSRVPVPETRLD
Ga0318501_100932752	3300031736	Soil	MKKLIAAALIICATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANTLPVLETRLD
Ga0318501_101093143	3300031736	Soil	MKKLIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRDRPQTANSRAPVPETRLD
Ga0306918_105591151	3300031744	Soil	NRSEMKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVQGRPQTANRVPVLETRLD
Ga0306918_111763321	3300031744	Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRLTAVMLEFGAKSRGPTS
Ga0318502_104418512	3300031747	Soil	SRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRDRPQTANSRAPVPETRLD
Ga0318535_100364152	3300031764	Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPALETRLD
Ga0318509_101758223	3300031768	Soil	RRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRDRPQTANSRAPVPETRLD
Ga0318526_100810592	3300031769	Soil	MDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRVPVPETRLD
Ga0318521_102700552	3300031770	Soil	MDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0318546_104759612	3300031771	Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRRTAVMLEFGAKCRGPTS
Ga0318543_101239442	3300031777	Soil	VFSKVGMDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318543_102024111	3300031777	Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPAL
Ga0318498_101867601	3300031778	Soil	KKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPALETRLD
Ga0318498_103165102	3300031778	Soil	DVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318547_101391372	3300031781	Soil	LRDLVLGYRSCRESRRNRSEMKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANTLPVLETRLD
Ga0318552_102063742	3300031782	Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRVPVPETRLD
Ga0318548_101122521	3300031793	Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRLT
Ga0318557_104022372	3300031795	Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRLTAVMLEFGAKSRGP
Ga0318576_103469451	3300031796	Soil	RSEMKKLIAAALIICATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPALETRLD
Ga0318523_104580322	3300031798	Soil	PLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0318497_103217491	3300031805	Soil	MKKLIAAALIICATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVP
Ga0318568_101440123	3300031819	Soil	VFSKVGMDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKMREAASPRLVRDRPQTANSRAPVPETRLD
Ga0318567_100874653	3300031821	Soil	VFSKVGMDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRDRPQTANSRAPVPETRLD
Ga0318564_103657961	3300031831	Soil	VASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVKGRPQTANSRVPVPETRLD
Ga0318564_103886452	3300031831	Soil	MKKLIAAALIVCATIALVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVGEVPSPRLVRGRPQTANRVPV
Ga0310917_105988521	3300031833	Soil	GDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0318527_101642701	3300031859	Soil	RSEMKKLIAAALIICATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANTLPVLETRLD
Ga0318527_102801381	3300031859	Soil	MDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0306919_112801961	3300031879	Soil	MKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRLTAVMLEFGAKSRGPTS
Ga0306919_114743082	3300031879	Soil	TIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0306925_102402992	3300031890	Soil	MKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0306925_114301011	3300031890	Soil	AGGDPLKSRRNRSEVKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPSLVRDRPQTANSRVPVPETRLD
Ga0306925_121777852	3300031890	Soil	SRRNRSEMKKLIAAALIVCATIALVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPVLETRLD
Ga0318536_100122981	3300031893	Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQT
Ga0318536_101658551	3300031893	Soil	ALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPALETRLD
Ga0318522_101418972	3300031894	Soil	MKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRRTAVMLEFGAKCRGPTS
Ga0318520_101382104	3300031897	Soil	MKKLIAAALIVCATIALVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPALETRLD
Ga0318520_106494422	3300031897	Soil	VFSKVGMDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0306923_104271853	3300031910	Soil	MKKLIAAALIVCATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVAVLETRLD
Ga0306921_110590611	3300031912	Soil	KLIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0306921_111713013	3300031912	Soil	DLVLGYRSCRESRRNRSEMKKLIAAALIICATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPALETRLD
Ga0310912_103018772	3300031941	Soil	MDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRDRPQTANSRAPVPETRLD
Ga0310910_108514411	3300031946	Soil	MKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRDRPQTANSRAPVPETRLD
Ga0310909_101415551	3300031947	Soil	ATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPVLETRLD
Ga0306926_103419765	3300031954	Soil	SSHLRDLVLGYRSCRESRRNRSEMKKLIAAALIVCATIALVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPVLETRLD
Ga0306926_109747783	3300031954	Soil	PLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0306922_104026742	3300032001	Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNNQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRRTAVMLEFGAKCRGPTS
Ga0318562_105208741	3300032008	Soil	EMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRPQTANRVPVLETRLD
Ga0318569_101086871	3300032010	Soil	CCGRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0318559_101957122	3300032039	Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0318559_105815181	3300032039	Soil	MDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPR
Ga0318545_100500792	3300032042	Soil	VFSKVGMDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRDRPQTANSRAPVPETRLD
Ga0318545_102740622	3300032042	Soil	MLRAAGDDPLKSRRTRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318545_103754601	3300032042	Soil	MLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPR
Ga0318558_102983113	3300032044	Soil	LIAAALIVCTTIAVVAVTIIRHLNNKQDATWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0318558_106075871	3300032044	Soil	DPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318532_100561461	3300032051	Soil	MDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0318506_104494481	3300032052	Soil	ASLLRAAGDDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHVNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIGEAPSPRLVRGRPQTANSRVPVPETRLD
Ga0318570_104571391	3300032054	Soil	LIICATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPALETRLD
Ga0318533_109878881	3300032059	Soil	MDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQ
Ga0306924_101946782	3300032076	Soil	MLRAAGGDPLKSRRNRSEMKKLIAAALIVCTTIAVVVVAIVRHVNNKQDAAWCHDHGYAHYATKDGFCVGAGGKLFKVREVPSPRLVRGRLTAVMLEFGAKSRGPTS
Ga0306924_109661972	3300032076	Soil	VFSKVGMDVASRRGDPLKSRRNRSEMKKLIAAALIVCTTIAVVAVTIIRHLNNKQDAAWCHDHGYANYATKDGFCVGAGGKLFKIREAASPRLVRGRPQTANSRAPVPETRLD
Ga0318577_105460332	3300032091	Soil	MKKLIAAALIICATIAVVAVAIVRHVNNTQDALWCHDHGYAHYATKDGFCVGAGGKLFKVREVSSPRLVRGRPQTANRVPAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074267

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences