NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F074321

Metagenome Family F074321

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074321
Family Type Metagenome
Number of Sequences 119
Average Sequence Length 47 residues
Representative Sequence ERRDDDHGDHGGAKIVGEGEPATVVIKTSKQQRIKHHSIETKP
Number of Associated Samples 71
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 17.86 %
% of genes near scaffold ends (potentially truncated) 77.31 %
% of genes from short scaffolds (< 2000 bps) 94.12 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(84.874 % of family members)
Environment Ontology (ENVO) Unclassified
(87.395 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(85.714 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.76%    β-sheet: 2.82%    Coil/Unstructured: 70.42%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005290|Ga0065712_10792223Not Available515Open in IMG/M
3300005354|Ga0070675_101094869Not Available732Open in IMG/M
3300005456|Ga0070678_102112219Not Available534Open in IMG/M
3300005543|Ga0070672_100925882Not Available770Open in IMG/M
3300009098|Ga0105245_11483111Not Available729Open in IMG/M
3300009148|Ga0105243_11406381Not Available718Open in IMG/M
3300009176|Ga0105242_11045897Not Available827Open in IMG/M
3300011119|Ga0105246_10642129Not Available923Open in IMG/M
3300013296|Ga0157374_11658824Not Available664Open in IMG/M
3300013296|Ga0157374_12144455Not Available586Open in IMG/M
3300013297|Ga0157378_12141443Not Available610Open in IMG/M
3300013297|Ga0157378_12224468Not Available600Open in IMG/M
3300014969|Ga0157376_11059743Not Available835Open in IMG/M
3300014969|Ga0157376_12904780Not Available519Open in IMG/M
3300015267|Ga0182122_1017219Not Available744Open in IMG/M
3300015267|Ga0182122_1027351Not Available659Open in IMG/M
3300015268|Ga0182154_1064265Not Available523Open in IMG/M
3300015269|Ga0182113_1032519Not Available698Open in IMG/M
3300015269|Ga0182113_1094585Not Available507Open in IMG/M
3300015274|Ga0182188_1011795Not Available771Open in IMG/M
3300015276|Ga0182170_1020290Not Available733Open in IMG/M
3300015276|Ga0182170_1036808Not Available624Open in IMG/M
3300015276|Ga0182170_1037850Not Available619Open in IMG/M
3300015276|Ga0182170_1047722Not Available580Open in IMG/M
3300015277|Ga0182128_1013567Not Available821Open in IMG/M
3300015277|Ga0182128_1024464Not Available702Open in IMG/M
3300015277|Ga0182128_1034898Not Available637Open in IMG/M
3300015277|Ga0182128_1052553Not Available568Open in IMG/M
3300015277|Ga0182128_1059204Not Available549Open in IMG/M
3300015279|Ga0182174_1039974Not Available631Open in IMG/M
3300015281|Ga0182160_1030088Not Available673Open in IMG/M
3300015282|Ga0182124_1046523Not Available595Open in IMG/M
3300015283|Ga0182156_1033856Not Available665Open in IMG/M
3300015286|Ga0182176_1025356Not Available735Open in IMG/M
3300015286|Ga0182176_1059129Not Available566Open in IMG/M
3300015288|Ga0182173_1008678Not Available947Open in IMG/M
3300015288|Ga0182173_1011306Not Available883Open in IMG/M
3300015289|Ga0182138_1041196Not Available631Open in IMG/M
3300015291|Ga0182125_1084474Not Available521Open in IMG/M
3300015292|Ga0182141_1036443Not Available665Open in IMG/M
3300015295|Ga0182175_1026258Not Available740Open in IMG/M
3300015295|Ga0182175_1032657Not Available696Open in IMG/M
3300015298|Ga0182106_1033588Not Available702Open in IMG/M
3300015298|Ga0182106_1036853Not Available684Open in IMG/M
3300015298|Ga0182106_1039193Not Available672Open in IMG/M
3300015298|Ga0182106_1062568Not Available586Open in IMG/M
3300015300|Ga0182108_1071533Not Available570Open in IMG/M
3300015302|Ga0182143_1036633Not Available687Open in IMG/M
3300015302|Ga0182143_1048058Not Available636Open in IMG/M
3300015302|Ga0182143_1059492Not Available598Open in IMG/M
3300015302|Ga0182143_1100901Not Available508Open in IMG/M
3300015303|Ga0182123_1024423Not Available748Open in IMG/M
3300015303|Ga0182123_1084267Not Available527Open in IMG/M
3300015304|Ga0182112_1048133Not Available638Open in IMG/M
3300015304|Ga0182112_1062214Not Available592Open in IMG/M
3300015304|Ga0182112_1090555Not Available528Open in IMG/M
3300015307|Ga0182144_1057659Not Available610Open in IMG/M
3300015307|Ga0182144_1082347Not Available548Open in IMG/M
3300015307|Ga0182144_1089753Not Available534Open in IMG/M
3300015308|Ga0182142_1038731Not Available699Open in IMG/M
3300015314|Ga0182140_1032267Not Available738Open in IMG/M
3300015314|Ga0182140_1102055Not Available523Open in IMG/M
3300015322|Ga0182110_1029258Not Available780Open in IMG/M
3300015323|Ga0182129_1052286Not Available640Open in IMG/M
3300015323|Ga0182129_1074749Not Available576Open in IMG/M
3300015323|Ga0182129_1114614Not Available504Open in IMG/M
3300015341|Ga0182187_1095111Not Available657Open in IMG/M
3300015341|Ga0182187_1106031Not Available633Open in IMG/M
3300015342|Ga0182109_1067628Not Available782Open in IMG/M
3300015342|Ga0182109_1190860Not Available534Open in IMG/M
3300015343|Ga0182155_1094052Not Available691Open in IMG/M
3300015345|Ga0182111_1126914Not Available648Open in IMG/M
3300015345|Ga0182111_1189695Not Available555Open in IMG/M
3300015345|Ga0182111_1218900Not Available525Open in IMG/M
3300015346|Ga0182139_1057490Not Available867Open in IMG/M
3300015347|Ga0182177_1112106Not Available682Open in IMG/M
3300015347|Ga0182177_1115065Not Available675Open in IMG/M
3300015351|Ga0182161_1125308Not Available679Open in IMG/M
3300015351|Ga0182161_1180020Not Available590Open in IMG/M
3300015355|Ga0182159_1332249Not Available515Open in IMG/M
3300015361|Ga0182145_1073405Not Available697Open in IMG/M
3300015361|Ga0182145_1175217Not Available520Open in IMG/M
3300017404|Ga0182203_1097860Not Available596Open in IMG/M
3300017407|Ga0182220_1037091Not Available678Open in IMG/M
3300017409|Ga0182204_1088258Not Available553Open in IMG/M
3300017410|Ga0182207_1086851Not Available639Open in IMG/M
3300017410|Ga0182207_1155817Not Available524Open in IMG/M
3300017411|Ga0182208_1125194Not Available508Open in IMG/M
3300017415|Ga0182202_1068147Not Available633Open in IMG/M
3300017415|Ga0182202_1097059Not Available566Open in IMG/M
3300017417|Ga0182230_1097692Not Available541Open in IMG/M
3300017420|Ga0182228_1128118Not Available504Open in IMG/M
3300017424|Ga0182219_1079973Not Available600Open in IMG/M
3300017425|Ga0182224_1098657Not Available595Open in IMG/M
3300017425|Ga0182224_1104629Not Available584Open in IMG/M
3300017427|Ga0182190_1086794Not Available627Open in IMG/M
3300017427|Ga0182190_1154795Not Available513Open in IMG/M
3300017433|Ga0182206_1097153Not Available590Open in IMG/M
3300017433|Ga0182206_1105042Not Available575Open in IMG/M
3300017436|Ga0182209_1127513Not Available557Open in IMG/M
3300017438|Ga0182191_1063291Not Available716Open in IMG/M
3300017442|Ga0182221_1044792Not Available758Open in IMG/M
3300017442|Ga0182221_1150799Not Available522Open in IMG/M
3300017680|Ga0182233_1093398Not Available552Open in IMG/M
3300017681|Ga0182226_1082389Not Available598Open in IMG/M
3300017682|Ga0182229_1060024Not Available647Open in IMG/M
3300017683|Ga0182218_1055802Not Available686Open in IMG/M
3300017684|Ga0182225_1113776Not Available542Open in IMG/M
3300021060|Ga0182232_1022730Not Available1087Open in IMG/M
3300025901|Ga0207688_10456034Not Available797Open in IMG/M
3300025908|Ga0207643_11009272Not Available538Open in IMG/M
3300025935|Ga0207709_11541115Not Available552Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere84.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.04%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.20%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.84%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.84%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015267Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015268Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015269Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015274Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015276Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015277Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015279Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015281Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015282Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015283Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015286Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015288Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015289Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015291Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015292Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015295Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015298Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015300Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015302Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015303Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015304Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015307Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015308Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015314Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015321Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015322Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015323Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015342Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015343Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015351Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017404Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017407Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017409Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017415Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017417Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017420Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017424Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017427Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017433Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017436Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017442Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017680Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017681Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017682Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017683Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017684Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300021060Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MGHost-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0065712_1079222313300005290Miscanthus RhizosphereMRDDDYGDHGGAKIVGEGEPATAVIKMSRQQQIKYYSIETKP*
Ga0070675_10109486913300005354Miscanthus RhizospherePVAHPERVEARSEVGEATERRDDDHGDHGGAKIVGEEEPATAVIKMSKQHRIKHHSIETKP*
Ga0070678_10211221913300005456Miscanthus RhizosphereSDHYGELCGAKIVGEGEPATAVIKMSKQQLTKDYSIETKP*
Ga0070672_10092588223300005543Miscanthus RhizosphereMRDDDYGDHGGAKIVGKGEPATAVIKMSRQQQIKYYSIETKP*
Ga0105245_1148311113300009098Miscanthus RhizosphereELSDHYGELCGAKIVGEGEPATAVIKMSKQQLTKDYSIETKP*
Ga0105243_1140638113300009148Miscanthus RhizosphereDHYGEPSDHYGELCEAKIVGKGEPATAAIKMSKQQLTKDYSIETKP*
Ga0105242_1104589713300009176Miscanthus RhizosphereDHYGELSDHYGELCGAKIVGEGEPATAVIKMSKQQLTKDYSIETKP*
Ga0105246_1064212913300011119Miscanthus RhizosphereMRDDDYGDHGGAKIVGEGEPATTVIKMSRQQQIKYYSIETKP*
Ga0157374_1165882423300013296Miscanthus RhizosphereGGAKERRDDDYGDHGGAKIVGEGEPAATVIKTSKQQRIKHHSIETKP*
Ga0157374_1214445523300013296Miscanthus RhizosphereLEQTTVTRDDVHGDHGGAKIVGDGVPVTAVIKTSKQQRIKHHSIETKP*
Ga0157378_1214144313300013297Miscanthus RhizosphereELSDHYGELSDHYGELCGAKIVGEGEPATAVIKMSKQQLTKYYSIETKP*
Ga0157378_1222446813300013297Miscanthus RhizosphereMSEVGEATERRDNDHGDHGGAKIVGEGEPATAVIKTSKQQRIKHHSIEMKP*
Ga0157376_1105974313300014969Miscanthus RhizosphereHPERVEIRREVGDATERRDDDHGDHGRAKIVGEEEPVTAVIKTSKQHRIKHHSIEMKP*
Ga0157376_1290478023300014969Miscanthus RhizosphereMRDDDYGDHGGAKIVGEGEPAAAVIKMSRQQQIKYYSIE
Ga0182122_101721913300015267Miscanthus PhyllosphereGDHGGAKIVGEGEPATAVIKMSRQQQIKYYSIETKP*
Ga0182122_102735133300015267Miscanthus PhyllosphereHYGELCGVKIVGEGEPATAVIKMSKQQLTKDYSIETKP*
Ga0182154_106426513300015268Miscanthus PhyllosphereMRDDDYGDHGGAKIVGEGEPATAVIKMSKQQLIKYYSIETKP*
Ga0182113_103251913300015269Miscanthus PhyllosphereERRDDDHGDHGGAKIVGEGEPATVVIKTSKQQRIKHHSIETKP*
Ga0182113_109458513300015269Miscanthus PhyllosphereHDGAKIIGEGEPATAVIKTSKQQRIKHHSIEMKP*
Ga0182188_101179513300015274Miscanthus PhyllosphereRRDDDHGDHGGAEIVGEEEPATAVIKMNKQHRIKHHSIETKP*
Ga0182170_102029013300015276Miscanthus PhyllosphereSRVGGATEMRDDDYGDHGGAKIVGEGEPATAVIKMSRQQQIKYYSIETKP*
Ga0182170_103680813300015276Miscanthus PhyllosphereHPERVEARSEVGEAMERRDDDHGDHGGAKIVGEIEPATAVIKTSKQHRIKHYSIETKP*
Ga0182170_103785013300015276Miscanthus PhyllosphereEAPVAHPERVEARREVGDATERRDDDHGDHARAKIVGEEEPATAVIKTSKQHRIKHHSIETKP*
Ga0182170_104772213300015276Miscanthus PhyllosphereDHGDHGGAKIVGEEEPATAVIKTSKQHGIKHHSIETKP*
Ga0182128_101356713300015277Miscanthus PhyllosphereMRDDDYGDHGGAKIVGEGEPATAVIKMSRQQQSKYYSIKTKP*
Ga0182128_102446423300015277Miscanthus PhyllosphereSEVGEATERRDDDHGDHDGAKIVGEEEPVTAVIKTSKQHRIKHHNIETKP*
Ga0182128_103489813300015277Miscanthus PhyllosphereSVAHPERVEASSEVGGATERRDDDHGDHGRAKIVGEEEPATVVIKTSKQHRIKHHSIEMKP*
Ga0182128_105255323300015277Miscanthus PhyllosphereVEARSEVGEATERRDDDHGDHGGAKIVGEGEPATAVIKMSKQHRIKHHSIETKP*
Ga0182128_105920413300015277Miscanthus PhyllosphereVAHPERVGARSEVGEATERRDDDHGDHGRAKIVGEEEPVTTVVKMSNQLWIKY
Ga0182174_103997413300015279Miscanthus PhyllosphereEARSEIGEATERRDDVHSDHGGAKIIGDGVPATAVIKTSKQQRIKHHSIETKL*
Ga0182160_103008813300015281Miscanthus PhyllosphereRDDDHGDHGGAKIVGEEEPPTAVIKMSKQHRIKHHIIEMKP*
Ga0182124_104652313300015282Miscanthus PhyllosphereLSDHYGELCGAKIVGEGEPATAVIKMSKQQLTKYYSIETKP*
Ga0182156_101796113300015283Miscanthus PhyllosphereDHGDHGGAKIVGEEEPATVVIKTSKQHRIKHHNIETKP*
Ga0182156_103385633300015283Miscanthus PhyllosphereHYGELCEAKIVGEGEPATAVIKMSKQQLTKDYSIKTKPQEH*
Ga0182176_102535613300015286Miscanthus PhyllosphereETMERRDDDHGDHGGAKIVGEGESATAVIKMSKQQRIKHHSNETKP*
Ga0182176_105912913300015286Miscanthus PhyllosphereATSRVGEATEMRDDDYGDHGGAKIVGEGEPATTVIKTSKQHRIKHHCIKTKP*
Ga0182173_100867813300015288Miscanthus PhyllosphereMRDDDYGDHDGAKIVGEGEPATAVIKMSRQQQIKYYSIETKP*
Ga0182173_101130623300015288Miscanthus PhyllosphereVAHPEHVEARSEVGEATERRDDDHGDHGGAKIVGEGEPATVVIKTSKQQWIKYYSIKTKP
Ga0182138_104119623300015289Miscanthus PhyllosphereDHGGAKIVGEGEPAIAVIKMSKQQLTKYYSIETKP*
Ga0182125_108447423300015291Miscanthus PhyllosphereDHGGAKIVGEGEPATAVIKMSKQQRIKHHSIEMKP*
Ga0182141_103644313300015292Miscanthus PhyllosphereARREVGDATERRDDDHSDHGRAKIVGEEEPATVVIKTSKQHRIKHHSIETKS*
Ga0182175_102625813300015295Miscanthus PhyllosphereGATERRDDDHGDHGGAKVVGDGEPATAVIKTSKQQRIKYYSIKTKP*
Ga0182175_103265713300015295Miscanthus PhyllosphereVAHPERVEARSEVGEATERRDDDHGDHSGAKIVGEEEPATAVIKMSKQHRIKHHSIETKP
Ga0182106_103358813300015298Miscanthus PhyllosphereERVEARSEVGEATERRDDDHGDHGGAKIIGEEEPATAVIKTSKQHRIRHHSIETKP*
Ga0182106_103685313300015298Miscanthus PhyllosphereGEATERRDDDHGDHGGAKIVGEEESATAVIKTSKQHRIKHHSIETKP*
Ga0182106_103919323300015298Miscanthus PhyllosphereRRDDDHGYHGGAKIVSEKESVTAVIKTSKQHRIKHHSIETKP*
Ga0182106_106256813300015298Miscanthus PhyllosphereHDRATSRVGGATERHDNNYGDHGRAKIIGEGEPATAVIKMSKQQLTKYYSIERKP*
Ga0182108_107153323300015300Miscanthus PhyllosphereGEATERRDDDHGDHGGAKIVSEEESATAVIKTSKQHRIKHHSIEMKP*
Ga0182143_103663313300015302Miscanthus PhyllosphereGGATEMRDDDYGDHGGAKIVGEGEPATAVIKMSRQQQIKYYSIETKP*
Ga0182143_104805823300015302Miscanthus PhyllosphereEVGEATERHDDDHGDHGGAKIVGEEEPVTAVIKTSKQHRIKHHSIETKP*
Ga0182143_105949233300015302Miscanthus PhyllosphereDHGDHSGAKIVGEGEPATAVIKTSKQHRIKHHSIEMKP*
Ga0182143_110090113300015302Miscanthus PhyllosphereDDDYGDHGGAKIVGEGEPATTVIKMSRQQQIKYYSIETKP*
Ga0182123_102442313300015303Miscanthus PhyllosphereRSEVEEATERRDDDHGDHDGAKIIGEGEPATAVIKTSKQQRIKHHNIEMKS*
Ga0182123_108426713300015303Miscanthus PhyllosphereRSEVGEATERRDDGHGDHSKAKIVDEGEPASAVIKTSKQQRIKHRSI*
Ga0182112_104813313300015304Miscanthus PhyllosphereRRDDDYGDHGGAKIVGEGEPATAVIKRSKQQLIKYYSIETKL*
Ga0182112_106221413300015304Miscanthus PhyllospherePERVEARREVRDATERRDDDHGDHDGAKIVSEEEPATAVIKMSKQHRIKHHSIETKP*
Ga0182112_109055513300015304Miscanthus PhyllosphereDHGGAKIVGEEEPATALIKTSKQHRIKHHSIKMKP*
Ga0182144_105765913300015307Miscanthus PhyllosphereVTRDDVHGDHGRGKIVGDVVLATAMGKTTKQQGIKHHGIETKPKVHRSR
Ga0182144_108234723300015307Miscanthus PhyllosphereATERCDDDNGDHGGAKVVSDGEPATAVVKTSKQQQIKYYSIKTKP*
Ga0182144_108975313300015307Miscanthus PhyllosphereATERRDDVHGDHGGANIVDDGVPATAVIKTSKQQRIKHHSIETKP*
Ga0182142_103873113300015308Miscanthus PhyllosphereIQEAPVAHPERVEARNEVGEATKRCDDDHGDHGGAKIVGEGEPATAVIKMSKQQWIKYYSIDMKP*
Ga0182140_103226713300015314Miscanthus PhyllosphereDHGGAKIVGEEEPVTAVIRTSKQHRIKPHSIEMKP*
Ga0182140_110205513300015314Miscanthus PhyllosphereDDHGDHSGAKIVGEEEPATAVIKTSKQHRIKHHSIETKP*
Ga0182127_105015213300015321Miscanthus PhyllosphereLKQGIQEAPVAHPERVEARSEIGEATERRDDVHSDHGGAKIIGDGVPATAVIKTSKQQRIKHHSIETKP*
Ga0182110_102925813300015322Miscanthus PhyllosphereELSDHYGELSNHYGDHGGAKIVGEGEPATAVIKMSKQQLIKYYSIETKP*
Ga0182129_105228613300015323Miscanthus PhyllosphereVETRREVEDATERRDDDHGDHGGAKIVGEEEPTTVVIKTSKQHGIKHHSIETKP*
Ga0182129_107474913300015323Miscanthus PhyllospherePERVEARREIRDATERRDNDHGDHGGAKIVGEEEPATAVIKTSKQHRIKHHCIKTKP*
Ga0182129_111461413300015323Miscanthus PhyllosphereRSEVGEAKERRDDDHGDHGGAKIAGEEEPGTAVIKMSKQHRIKHHSIETKP*
Ga0182187_109511113300015341Miscanthus PhyllosphereCVEAKNKAGKATERRDDDHGDHSEAKIIGEGEQATAAIKTSNQQRIKHHNIETKP*
Ga0182187_110603133300015341Miscanthus PhyllosphereATERRDDDHGDHGGVKIFSEKEPMTAVIKTSKQHRIKHHSIEMKP*
Ga0182109_106762813300015342Miscanthus PhyllosphereMHDDDYGDHGGAKIVGKGEPATAVIKMSRQQQIKYYSIETKP*
Ga0182109_119086023300015342Miscanthus PhyllosphereDHYGELCGAKIVGEGEPATAVIKMSKQQLTKYYSIKTKS*
Ga0182155_109405213300015343Miscanthus PhyllosphereDDYGDHGRAKIVGEGEPVTAVIKMSKQQLTKYYSIETKP*
Ga0182111_112691413300015345Miscanthus PhyllosphereDHGDHGGAKIVGEEEPATTVIKTSKQHRIKHHSIETKP*
Ga0182111_118969513300015345Miscanthus PhyllosphereHGGAKIVGEEEPATTVIKTSKQHRIKHHSIEMKP*
Ga0182111_120280323300015345Miscanthus PhyllosphereVTRDDVHDDHGGAKIIGEGVPATAVGKTTKQQWIKHHSIETKL*
Ga0182111_121890013300015345Miscanthus PhyllosphereRDDVHGDHGGAKIVGDGVPATAGGKMTKQQGIKHHGIETKP*
Ga0182139_105749013300015346Miscanthus PhyllosphereSEVGEATERRDDDHGDHGGAKIVGEGEPATTVIKTSKQHRIKHHNIETKP*
Ga0182177_111210613300015347Miscanthus PhyllosphereVEARSEVGEATERRDDDHGDHGGAKIVGEGEPTTAVIKMSKQQRIKHHSIETKP*
Ga0182177_111506513300015347Miscanthus PhyllosphereERRDDDHGDHGGAKIVGEEEPTTTVIQTSKQHRIKHHSIETKP*
Ga0182161_112530813300015351Miscanthus PhyllosphereRDDDHGDHGGAKIVGEEEPATAVIKTSKQHKIKHHSIETKP*
Ga0182161_118002023300015351Miscanthus PhyllosphereHKARGATERRDDDQSDHGRAKIIGEEEPVTTVIKMSKQQRIKYYSIKTKP*
Ga0182159_133224923300015355Miscanthus PhyllosphereARSEVGEATESRDDDHGDHGGAKIVDEGEPASAVIKTSKQQRIKHRSI*
Ga0182145_107340523300015361Miscanthus PhyllosphereASSKVGEGTERRDDDHGDHSGAKIVGEGEPATAVIKMSKQHRIKHHSIEMKL*
Ga0182145_117521713300015361Miscanthus PhyllosphereARSEVGEATERRDDDHGDHGGAKIVGDEEPATAVIKTSKQHRIKHHSIETKP*
Ga0182203_109786013300017404Miscanthus PhyllosphereHPERVKARSEIEEATERRDDVHGDHGGEKIVGDGVPATAVIKTSKQHRIKHHSIETKP
Ga0182220_103709113300017407Miscanthus PhyllosphereTERRDNDHGDHGGAKIIGEEEPATAVIKTNKQHRIKHHSIETKP
Ga0182204_108825813300017409Miscanthus PhyllosphereYGDHGGAKIVGEGEPATAVIKMSRQQQIKYYSIETKP
Ga0182204_110226123300017409Miscanthus PhyllosphereVEGDGQAGGTTERRVDVHGGHGEAEIVDDGEPVTAVGKMTKQQRIKYHSIETKP
Ga0182207_108685113300017410Miscanthus PhyllosphereMERRDDDYGDHGGAKIVGEGEPATAVIKTSKQQLTKYYSIETKP
Ga0182207_115581713300017410Miscanthus PhyllosphereHSDHGGAKIVGEEEPATAVIKTSKQHRVKHHSIETKP
Ga0182208_112519413300017411Miscanthus PhyllosphereERRDDDHGDHGGAKIVGEEEPTTTVIKMSKQHRIKHHSIETKP
Ga0182202_106814723300017415Miscanthus PhyllosphereVAHPERVEARSEVGEATERRDDDHGDHDGAKIVGEEEPATAVIKTSKQHRIKHHSIETKP
Ga0182202_109705923300017415Miscanthus PhyllosphereGARSEVGETTERRVDYHGDHGGAEIVDEEEPATAVIKTSKQHRIKHYSIETKS
Ga0182230_109769213300017417Miscanthus PhyllosphereMRDDDYGDHGGAKIVGEGEPATAVIKMSKQQLIKYYSIETKP
Ga0182228_112811813300017420Miscanthus PhyllosphereDHGDHGGAKIVGEEEPVTAVIKTSKQHRIQHHSIETKP
Ga0182219_107997323300017424Miscanthus PhyllosphereDDHGDHGGAKIVGEEEPVTAVIKTSKQHRIKHHSIETKP
Ga0182224_109865713300017425Miscanthus PhyllosphereQEAPVAHPERVEARSEVGEATERHDDDHGYHGGAKIVGEGEPATTVIKTSKQHRIKHHCIKTKP
Ga0182224_110462923300017425Miscanthus PhyllosphereMERRDDDYGDHGRAKIIGEGEPATAVIKMSKQQLIKYYSIETKP
Ga0182190_108679423300017427Miscanthus PhyllosphereVAHPERVEASSEVGEATERRDDDHGDHGGAKIVGEEEPATAVIKTSKQHRIKHHSIETKP
Ga0182190_115479513300017427Miscanthus PhyllosphereEARSEVGEATERRDDDHGDHGGAKIVGEEEPATAVIKTSKQHRIKHHSIETKP
Ga0182206_109715313300017433Miscanthus PhyllosphereVEARSEVGEATERRDDDHGDHGGAKIVGEGEPATAAIKTHKQQWIKYYSIETKS
Ga0182206_110504233300017433Miscanthus PhyllosphereDHGGAEIVGEEEPATAVIKTSKQHRIKHYSIKMKP
Ga0182209_112751313300017436Miscanthus PhyllosphereSDHYGELSDHYGELCGAKIVGEGEPATTVIKTSKQHRIKHDSIETKL
Ga0182209_117074713300017436Miscanthus PhyllosphereATVTRDDVHDDHGGAKIIGEGVPATAVGKTTKQQWIKHHSIETKL
Ga0182191_106329133300017438Miscanthus PhyllosphereVAHPERVEARSEVGEAMERRDDDHGDHGGAKIVGEIEPATAVIKTSKQHRIKHYSIETKP
Ga0182191_112287313300017438Miscanthus PhyllosphereETGEATVTRDDVHGDHGGAKIVGDGVPATAVGKTTKQHWIKHHSIETKP
Ga0182221_104479223300017442Miscanthus PhyllosphereEAPVAHPERVEARSEVGEATERRDDDHGDHGGAKIVSEEEPATTVIKTSKQHRIKHHSIETKP
Ga0182221_107624113300017442Miscanthus PhyllosphereDHGGAKIVGEGEPATVVIKTSKQQRIKHHSIETKP
Ga0182221_115079913300017442Miscanthus PhyllosphereARSEVGEATEKRDDDHGDHGGAEIVGEEEPATAVIKTSKQHRIKHYSIETRP
Ga0182233_109339823300017680Miscanthus PhyllosphereVAHPERVEARSEVGEATERRDDDHGDHGGAKIVGEEEPATVVIKTSKQHRIKHHSIETKP
Ga0182226_108238913300017681Miscanthus PhyllosphereYGELSDHYGKLCGAKIVGEGEPATAVIKMSKQQLTKDYSIETKP
Ga0182229_106002413300017682Miscanthus PhyllosphereMERRDDNYGDHGGAKIVGEGEPATVVIKMSKQQLIKYYSIETKP
Ga0182218_105580213300017683Miscanthus PhyllosphereERRDDDHGAHDGAKIVGEGEPVTAVIKTSKQHRIKHHSIETKP
Ga0182225_111377623300017684Miscanthus PhyllosphereGEATERRDDDHGDHGGAKIIGEGESATAVIKTSKQQRIKHHSIETKP
Ga0182232_102273013300021060PhyllosphereMRDDDYGDHGGAKIVGEGEPATAVIKMSRQQQIKYYSIETKP
Ga0207688_1045603413300025901Corn, Switchgrass And Miscanthus RhizosphereMRDDNYGDHGGAKIVGEGEPATAVIKMSKQQLTKDYSIETKP
Ga0207643_1100927213300025908Miscanthus RhizosphereEVGDATERRDDDHGDHGKAKIVGEEEPATVVIKTSKQHRIKHHSIEMKP
Ga0207709_1154111513300025935Miscanthus RhizosphereMRDDDYGDHGGAKIVGKGEPATAVIKMSRQQQIKYYSIETKP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.