Metagenome / Metatranscriptome Family F074478

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074478
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	54 residues
Representative Sequence	NGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH
Number of Associated Samples	55
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	84.03 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	37
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (87.395 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (60.504 % of family members)
Environment Ontology (ENVO)	Unclassified (94.118 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.479 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.43% β-sheet: 0.00% Coil/Unstructured: 28.57%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF10544	T5orf172	16.81
PF02493	MORN	1.68
PF13193	AMP-binding_C	1.68
PF00012	HSP70	1.68
PF05050	Methyltransf_21	0.84
PF13673	Acetyltransf_10	0.84
PF13365	Trypsin_2	0.84
PF00589	Phage_integrase	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	1.68
COG4642	Uncharacterized conserved protein	Function unknown [S]	1.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.39 %
All Organisms	root	All Organisms	12.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.39 %
cellular organisms	root	All Organisms → cellular organisms	12.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.08 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.39 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.56 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.39 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	7.56 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.39 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	6.72 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.39 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	6.72 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.39 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5.04 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	0.84 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.39 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5.04 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.84 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001584\|JGI12074J15755_1007965	Not Available	706	Open in IMG/M
3300005398\|Ga0066858_10014764	All Organisms → cellular organisms → Bacteria → Proteobacteria	2355	Open in IMG/M
3300005398\|Ga0066858_10061042	Not Available	1108	Open in IMG/M
3300005398\|Ga0066858_10061531	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300005398\|Ga0066858_10069538	Not Available	1033	Open in IMG/M
3300005398\|Ga0066858_10099273	Not Available	849	Open in IMG/M
3300005398\|Ga0066858_10103279	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300005398\|Ga0066858_10230033	Not Available	531	Open in IMG/M
3300005400\|Ga0066867_10157582	Not Available	844	Open in IMG/M
3300005400\|Ga0066867_10179996	Not Available	779	Open in IMG/M
3300005400\|Ga0066867_10187084	Not Available	762	Open in IMG/M
3300005408\|Ga0066848_10116349	Not Available	725	Open in IMG/M
3300005408\|Ga0066848_10193173	Not Available	546	Open in IMG/M
3300005422\|Ga0066829_10041770	Not Available	1430	Open in IMG/M
3300005422\|Ga0066829_10151065	Not Available	689	Open in IMG/M
3300005422\|Ga0066829_10156892	Not Available	675	Open in IMG/M
3300005423\|Ga0066828_10081079	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300005423\|Ga0066828_10092321	All Organisms → cellular organisms → Bacteria → Proteobacteria	1055	Open in IMG/M
3300005423\|Ga0066828_10157270	Not Available	764	Open in IMG/M
3300005425\|Ga0066859_10036732	Not Available	1504	Open in IMG/M
3300005425\|Ga0066859_10169123	Not Available	647	Open in IMG/M
3300005425\|Ga0066859_10200551	Not Available	587	Open in IMG/M
3300005426\|Ga0066847_10060814	Not Available	1197	Open in IMG/M
3300005428\|Ga0066863_10104222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1033	Open in IMG/M
3300005428\|Ga0066863_10138758	Not Available	875	Open in IMG/M
3300005508\|Ga0066868_10082894	Not Available	1011	Open in IMG/M
3300005508\|Ga0066868_10263209	Not Available	523	Open in IMG/M
3300005509\|Ga0066827_10159764	Not Available	799	Open in IMG/M
3300005520\|Ga0066864_10124747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	744	Open in IMG/M
3300005520\|Ga0066864_10230085	Not Available	525	Open in IMG/M
3300005520\|Ga0066864_10242759	Not Available	509	Open in IMG/M
3300005551\|Ga0066843_10106558	Not Available	806	Open in IMG/M
3300005592\|Ga0066838_10051855	Not Available	1169	Open in IMG/M
3300005592\|Ga0066838_10071655	Not Available	983	Open in IMG/M
3300005593\|Ga0066837_10185412	Not Available	746	Open in IMG/M
3300005594\|Ga0066839_10305761	Not Available	549	Open in IMG/M
3300005596\|Ga0066834_10175371	Not Available	684	Open in IMG/M
3300005596\|Ga0066834_10292246	Not Available	511	Open in IMG/M
3300005603\|Ga0066853_10088853	Not Available	1054	Open in IMG/M
3300006902\|Ga0066372_10852341	Not Available	554	Open in IMG/M
3300011312\|Ga0138349_1126927	Not Available	544	Open in IMG/M
3300012950\|Ga0163108_10472632	Not Available	809	Open in IMG/M
3300012950\|Ga0163108_10591695	Not Available	717	Open in IMG/M
3300020272\|Ga0211566_1046051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	962	Open in IMG/M
3300020272\|Ga0211566_1075517	Not Available	713	Open in IMG/M
3300020272\|Ga0211566_1090002	Not Available	643	Open in IMG/M
3300020272\|Ga0211566_1099148	Not Available	607	Open in IMG/M
3300020277\|Ga0211568_1084276	Not Available	670	Open in IMG/M
3300020291\|Ga0211524_1043955	Not Available	720	Open in IMG/M
3300020327\|Ga0211573_1056239	Not Available	988	Open in IMG/M
3300020327\|Ga0211573_1124487	Not Available	580	Open in IMG/M
3300020330\|Ga0211572_1148321	Not Available	514	Open in IMG/M
3300020331\|Ga0211569_1074985	Not Available	717	Open in IMG/M
3300020331\|Ga0211569_1120700	Not Available	540	Open in IMG/M
3300020338\|Ga0211571_1062460	Not Available	923	Open in IMG/M
3300020344\|Ga0211570_1095368	Not Available	656	Open in IMG/M
3300020361\|Ga0211531_1015030	Not Available	2558	Open in IMG/M
3300020361\|Ga0211531_1025142	Not Available	1833	Open in IMG/M
3300020361\|Ga0211531_1056966	Not Available	1104	Open in IMG/M
3300020364\|Ga0211538_1047145	Not Available	1357	Open in IMG/M
3300020364\|Ga0211538_1090169	Not Available	916	Open in IMG/M
3300020364\|Ga0211538_1163449	Not Available	640	Open in IMG/M
3300020364\|Ga0211538_1228213	Not Available	522	Open in IMG/M
3300020423\|Ga0211525_10161644	Not Available	962	Open in IMG/M
3300020423\|Ga0211525_10197882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	851	Open in IMG/M
3300022225\|Ga0187833_10104884	Not Available	1804	Open in IMG/M
3300022225\|Ga0187833_10175589	Not Available	1281	Open in IMG/M
3300022225\|Ga0187833_10225922	Not Available	1082	Open in IMG/M
3300022225\|Ga0187833_10428602	Not Available	696	Open in IMG/M
3300022225\|Ga0187833_10434828	Not Available	689	Open in IMG/M
3300022227\|Ga0187827_10389484	Not Available	868	Open in IMG/M
3300022227\|Ga0187827_10422810	Not Available	820	Open in IMG/M
3300022227\|Ga0187827_10774137	Not Available	534	Open in IMG/M
3300025265\|Ga0208467_1014511	Not Available	1566	Open in IMG/M
3300025265\|Ga0208467_1025983	Not Available	1040	Open in IMG/M
3300025265\|Ga0208467_1043283	Not Available	711	Open in IMG/M
3300025776\|Ga0208699_1003416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2737	Open in IMG/M
3300025776\|Ga0208699_1004431	Not Available	2332	Open in IMG/M
3300025776\|Ga0208699_1033629	Not Available	613	Open in IMG/M
3300026188\|Ga0208274_1034104	Not Available	1401	Open in IMG/M
3300026192\|Ga0207986_1031264	Not Available	1377	Open in IMG/M
3300026192\|Ga0207986_1049902	Not Available	1006	Open in IMG/M
3300026192\|Ga0207986_1056466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	927	Open in IMG/M
3300026192\|Ga0207986_1087417	Not Available	689	Open in IMG/M
3300026192\|Ga0207986_1102385	Not Available	618	Open in IMG/M
3300026205\|Ga0208406_1102432	Not Available	660	Open in IMG/M
3300026206\|Ga0207988_1026482	Not Available	1561	Open in IMG/M
3300026206\|Ga0207988_1040148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1194	Open in IMG/M
3300026206\|Ga0207988_1119830	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	597	Open in IMG/M
3300026208\|Ga0208640_1038551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1199	Open in IMG/M
3300026208\|Ga0208640_1091707	Not Available	654	Open in IMG/M
3300026210\|Ga0208642_1082207	Not Available	706	Open in IMG/M
3300026210\|Ga0208642_1087186	Not Available	679	Open in IMG/M
3300026211\|Ga0208132_1041526	Not Available	1138	Open in IMG/M
3300026212\|Ga0208409_1033537	Not Available	1360	Open in IMG/M
3300026212\|Ga0208409_1105214	Not Available	635	Open in IMG/M
3300026253\|Ga0208879_1108997	Not Available	1177	Open in IMG/M
3300026254\|Ga0208522_1155992	Not Available	570	Open in IMG/M
3300026261\|Ga0208524_1066330	Not Available	1012	Open in IMG/M
3300026267\|Ga0208278_1073439	Not Available	808	Open in IMG/M
3300031800\|Ga0310122_10339167	Not Available	653	Open in IMG/M
3300031802\|Ga0310123_10331847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	993	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	78.99%
Unclassified	Environmental → Aquatic → Marine → Unclassified	21.01%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	77.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	21.01%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.68%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	60.50%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	21.01%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	7.56%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	6.72%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.52%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001584	Marine microbial communities from the Deep Pacific Ocean - MP2097	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental	Open in IMG/M
3300005422	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental	Open in IMG/M
3300005426	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005428	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300005509	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51	Environmental	Open in IMG/M
3300005520	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251	Environmental	Open in IMG/M
3300005551	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A	Environmental	Open in IMG/M
3300005592	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005594	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82	Environmental	Open in IMG/M
3300005596	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300011312	Marine microbial communities from the Deep Pacific Ocean - MP2100 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300020272	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX556120-ERR599127)	Environmental	Open in IMG/M
3300020277	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX556102-ERR599152)	Environmental	Open in IMG/M
3300020291	Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556069-ERR599031)	Environmental	Open in IMG/M
3300020327	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556115-ERR599070)	Environmental	Open in IMG/M
3300020330	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556097-ERR599147)	Environmental	Open in IMG/M
3300020331	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX555910-ERR599076)	Environmental	Open in IMG/M
3300020338	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX555920-ERR599099)	Environmental	Open in IMG/M
3300020344	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556104-ERR598987)	Environmental	Open in IMG/M
3300020361	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX556078-ERR599167)	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300020423	Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556027-ERR599062)	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025265	Marine microbial communities from the Deep Pacific Ocean - MP2098 (SPAdes)	Environmental	Open in IMG/M
3300025776	Marine microbial communities from the Deep Pacific Ocean - MP2097 (SPAdes)	Environmental	Open in IMG/M
3300026188	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)	Environmental	Open in IMG/M
3300026192	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)	Environmental	Open in IMG/M
3300026200	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49 (SPAdes)	Environmental	Open in IMG/M
3300026205	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A (SPAdes)	Environmental	Open in IMG/M
3300026206	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74 (SPAdes)	Environmental	Open in IMG/M
3300026208	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72 (SPAdes)	Environmental	Open in IMG/M
3300026210	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251 (SPAdes)	Environmental	Open in IMG/M
3300026211	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)	Environmental	Open in IMG/M
3300026212	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201 (SPAdes)	Environmental	Open in IMG/M
3300026253	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026254	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86 (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300026261	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)	Environmental	Open in IMG/M
3300026262	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)	Environmental	Open in IMG/M
3300026267	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12074J15755_10079651	3300001584	Deep Ocean	NGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKALEEKVLLEDKEKLKVN*
Ga0066858_100147641	3300005398	Marine	PIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKILLEDKEKLKVN*
Ga0066858_100610421	3300005398	Marine	SKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKAYEEKALLESESKLTIH*
Ga0066858_100615313	3300005398	Marine	FKLINGSKEEPVKELEEFARDIFDKTGLNTKSDNLPLLLKAWKAFEEKALLEDKEKLKVH
Ga0066858_100695381	3300005398	Marine	PIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKVLLEKN*
Ga0066858_100992733	3300005398	Marine	FNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEKKKN*
Ga0066858_101032791	3300005398	Marine	NGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH*
Ga0066858_102300331	3300005398	Marine	KELKEVVSDSFDEAMFNTKSDTLPLLLKAWKAYEEKILLEKKKN*
Ga0066860_103142472	3300005399	Marine	LLKYDTLGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN*
Ga0066867_100618332	3300005400	Marine	KYDILGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKKKLR*
Ga0066867_101575821	3300005400	Marine	GESIKELEGFADNYWLEAKSDNLLLLLKAWKACQEKFLLEDKEKLKVH*
Ga0066867_101799963	3300005400	Marine	NLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH*
Ga0066867_101870841	3300005400	Marine	NGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEDKEKLKVH*
Ga0066848_101153162	3300005408	Marine	KLINGSKEEPVKELEEFARDIFDKTGLNSKSDNLPLLLKAWKAYEEKVLLEKKKN*
Ga0066848_101163491	3300005408	Marine	NLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKVLLEKN*
Ga0066848_101931731	3300005408	Marine	INGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKEWKAYE*
Ga0066829_100417701	3300005422	Marine	INGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKKKLR*
Ga0066829_101510651	3300005422	Marine	INGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH*
Ga0066829_101568921	3300005422	Marine	IKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKVCQEKILLEEKEKLKKGGIN*
Ga0066828_100810791	3300005423	Marine	GFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH*
Ga0066828_100923213	3300005423	Marine	EEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKALEEKVLLEDKEKLKVH*
Ga0066828_101572702	3300005423	Marine	LGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN*
Ga0066859_100367323	3300005425	Marine	NGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN*
Ga0066859_101691233	3300005425	Marine	GSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKAFEEKALLEEKKN*
Ga0066859_102005513	3300005425	Marine	LKEVVSDSFDEAMFNTKSDTLPLLLKAWKAYEDKVLLEKKKKLKVH*
Ga0066847_100608144	3300005426	Marine	LGFSLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKILLEKKKN*
Ga0066847_102328662	3300005426	Marine	KYEVLGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKVLLEKKKN*
Ga0066851_101719891	3300005427	Marine	LGFSLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKKKLR
Ga0066863_101042223	3300005428	Marine	FNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKVLLEDKEKLKVH
Ga0066863_101387582	3300005428	Marine	PIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKVLLEKKKN*
Ga0066868_100828941	3300005508	Marine	INGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEKKKN*
Ga0066868_102632091	3300005508	Marine	NGSKEEPIKELKEVVSDSFNEAMFNTKSDNLPLLLKAWKACEEKALLEEKKN*
Ga0066827_101597641	3300005509	Marine	LINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKFLLEEKKKLKLH*
Ga0066864_100393081	3300005520	Marine	DILGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKKKLR*
Ga0066864_101247471	3300005520	Marine	GSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEKKKN*
Ga0066864_102300852	3300005520	Marine	GSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKILLEDKEKLKVN*
Ga0066864_102427592	3300005520	Marine	GFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLSLLLKAWKACEEKVLLEKKKN*
Ga0066843_101065581	3300005551	Marine	GSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN*
Ga0066838_100518551	3300005592	Marine	NGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKVLLEKN*
Ga0066838_100716553	3300005592	Marine	ELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKEKLKVR*
Ga0066837_101854123	3300005593	Marine	EPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH*
Ga0066839_103057611	3300005594	Marine	LGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKVLLEKKKN*
Ga0066834_101753713	3300005596	Marine	LGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKAYEDKVLLEKKKN*
Ga0066834_102922461	3300005596	Marine	EEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH*
Ga0066853_100888533	3300005603	Marine	NGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAYEEKALLESESKLTIH*
Ga0066372_108523411	3300006902	Marine	ISKKKEVEHIKEFKEVISDKFDEEMHNFKSDIPLLLKAWKGYEEKVLLEEKEKLKVH*
Ga0138349_11269273	3300011312	Deep Ocean	ELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKFLLEEKKKLKLH*
Ga0163108_104726323	3300012950	Seawater	SKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN*
Ga0163108_105916953	3300012950	Seawater	NLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEKKKN*
Ga0211566_10460513	3300020272	Marine	GFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKVLLEDKEKLKV
Ga0211566_10755172	3300020272	Marine	INGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN
Ga0211566_10900021	3300020272	Marine	GSKEEPIKELKEVVSDSFNEAMFNTKSDTLPLLLKAWKACEEKFLLEEKKKLKLH
Ga0211566_10991481	3300020272	Marine	GFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKV
Ga0211568_10842761	3300020277	Marine	GFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKV
Ga0211524_10439551	3300020291	Marine	NGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN
Ga0211573_10332381	3300020327	Marine	LGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKKKLR
Ga0211573_10518111	3300020327	Marine	LGFKLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKVLLEDKEKLKVH
Ga0211573_10562394	3300020327	Marine	FKLINGSKEEPVKELEEFARDIFDKAGLNSKSNNLPLLLKAWKAYEDKALLESESKLTIH
Ga0211573_10894361	3300020327	Marine	LGFKLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN
Ga0211573_11244872	3300020327	Marine	LGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH
Ga0211572_11483211	3300020330	Marine	EEPIKELKEVVSDSFNEAMFNTKSDNLSLLLKAWKAFEEKALLEEKKN
Ga0211569_10749852	3300020331	Marine	EEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN
Ga0211569_11207002	3300020331	Marine	EEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH
Ga0211571_10624603	3300020338	Marine	IKELKEVVSDSFNEAMFNSKSDNLPLLLKAWKAYEEKALLESESKLTIH
Ga0211570_10953681	3300020344	Marine	KELKEVVSDSFNEAMFNTKSDTLPLLLKAWKACEEKFLLEEKKKLKLH
Ga0211531_10150304	3300020361	Marine	VVSDSFDEAMFNTKSDNLPLLLKAWKVCQEKILLEEKEKLKKGGIN
Ga0211531_10251421	3300020361	Marine	LGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAYEDKALLEKKKN
Ga0211531_10569661	3300020361	Marine	PIKELKEVVSDSFNEAMFNTKSDNLSLLLKAWKAFEEKALLEEKKN
Ga0211538_10471454	3300020364	Marine	NGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKAYEEKILLEKKKN
Ga0211538_10901692	3300020364	Marine	ELKEVVSDSFDEAMFNTKSDNLPLLLKAWKVCQEKILLEEKEKLKKGGIN
Ga0211538_11634491	3300020364	Marine	PIKELKEVVSDSFDEAMFNSKSDNLPLLLKAWKAYEEKALLESESKLTIH
Ga0211538_12282131	3300020364	Marine	NGSKEEPIKELKEVVSDSFNEAMFNTKSDTLPLLLKAWKACEEKFLLEEKKKLKLH
Ga0211525_101616441	3300020423	Marine	ELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAYEEKALLESESKLTIH
Ga0211525_101978823	3300020423	Marine	GSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKALEEKVLLEDKEKLKVH
Ga0187833_101048845	3300022225	Seawater	LGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAYEEKALLEKKKN
Ga0187833_101755894	3300022225	Seawater	GFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEKKKN
Ga0187833_102259223	3300022225	Seawater	VLGFNLINGSKEEKKEEPVKDLEEFARDIFDAEGLNSKPDILPLLLKEWKAYE
Ga0187833_104286022	3300022225	Seawater	SKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKEKLKVR
Ga0187833_104348283	3300022225	Seawater	INGSKEEPIKELKEVVSDSFNEAMFNTKSDNLPLLLKAWKACEEKVLLEKKKN
Ga0187827_103894841	3300022227	Seawater	NGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKVCQEKILLEEKEKLKKGGIN
Ga0187827_104228103	3300022227	Seawater	EEPKKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKEKLKVR
Ga0187827_104851571	3300022227	Seawater	ILGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH
Ga0187827_107741372	3300022227	Seawater	ILGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEKKKN
Ga0208467_10145113	3300025265	Deep Ocean	LKEVVSDSFDEAMFNTKSDNLPLLLKAWKVCQEKILLEEKEKLKKGGIN
Ga0208467_10259831	3300025265	Deep Ocean	LINGSKEEPIKELKEVVSDSFNEAMFNSKSDNLPLLLKAWKAYEEKALLESESKLTIH
Ga0208467_10432831	3300025265	Deep Ocean	GFSLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKV
Ga0208699_10034163	3300025776	Deep Ocean	LINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLSLLLKAWKACEEKVLLEKKKN
Ga0208699_10044311	3300025776	Deep Ocean	NLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN
Ga0208699_10336292	3300025776	Deep Ocean	IKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH
Ga0208274_10341042	3300026188	Marine	EEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKKKLR
Ga0207986_10312642	3300026192	Marine	GSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKFLLEEKKKLKKGGIN
Ga0207986_10499022	3300026192	Marine	KEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKEKLKVR
Ga0207986_10564661	3300026192	Marine	INGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKVLLEDKEKLKVH
Ga0207986_10874172	3300026192	Marine	INGSKEEPVKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKALEEKVLLEDKEKLKVN
Ga0207986_11023851	3300026192	Marine	KELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKALLEEKKKLKVH
Ga0208894_11309542	3300026200	Marine	KYDTLGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKEKLKVN
Ga0208406_10580871	3300026205	Marine	KYDILGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKKKLR
Ga0208406_11024323	3300026205	Marine	LINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH
Ga0207988_10264821	3300026206	Marine	EPIKELKEVVSDSFNEAMFNTKSDTLPLLLKAWKACEEKVLLEKN
Ga0207988_10401481	3300026206	Marine	IKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKVLLEDKEKLKVH
Ga0207988_11198302	3300026206	Marine	SKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH
Ga0208640_10385511	3300026208	Marine	LGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKVLLEDKEKLKVH
Ga0208640_10917071	3300026208	Marine	KEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKEKLKVR
Ga0208642_10822071	3300026210	Marine	KEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKFLLEEKKKLKLH
Ga0208642_10871861	3300026210	Marine	NLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH
Ga0208132_10273501	3300026211	Marine	DILGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKKKLR
Ga0208132_10415263	3300026211	Marine	PIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKILLEKKKN
Ga0208409_10335371	3300026212	Marine	KELKEVVSDSFDEAMFNTKSDNLSLLLKAWKACEEKVLLEKKKN
Ga0208409_11052141	3300026212	Marine	NGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKACEEKILLEKKKN
Ga0208879_11089971	3300026253	Marine	VEHIKEFKEVISDKFDEEMHNFKSDIPLLLKAWKAYEEKVLLEEKEKLKVH
Ga0208522_11559922	3300026254	Marine	EESIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH
Ga0208896_11997572	3300026259	Marine	FSLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAFEEKALLEEKKKLKVH
Ga0208524_10663301	3300026261	Marine	IKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKAYEEKALLESESKLTIH
Ga0207990_11080322	3300026262	Marine	EVLGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKKKLR
Ga0208278_10298722	3300026267	Marine	NLINGSKEEPIKELKEVVSDSFDEAMFNTKSDTLPLLLKAWKALEEKVLLEDKKKLR
Ga0208278_10734391	3300026267	Marine	KELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACEEKEKLKVR
Ga0310122_101229092	3300031800	Marine	VLGFNLINGSKEEPIKELKEVVSDSFDEAMFNTKSDNLPLLLKAWKACQEKLLLEEKEKLKEGRN
Ga0310122_103391671	3300031800	Marine	KELKELEEFAEYTFDEAMFNTKSDNLPLLLKAWKACQEKLLLEDKEKLKLH
Ga0310123_103318471	3300031802	Marine	VEHIKEFKEVISDKFDEEMHNFKSDIPLLLKAWKAYEEKILLEEKEKLKVH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074478

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences