Metagenome Family F074603

Basic Information
Family ID	F074603
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	67 residues
Representative Sequence	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD
Number of Associated Samples	100
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.14 %
% of genes near scaffold ends (potentially truncated)	21.01 %
% of genes from short scaffolds (< 2000 bps)	76.47 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (60.504 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.135 % of family members)
Environment Ontology (ENVO)	Unclassified (35.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.176 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.27% β-sheet: 0.00% Coil/Unstructured: 53.73%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01381	HTH_3	31.93
PF01555	N6_N4_Mtase	4.20
PF12844	HTH_19	1.68
PF01904	DUF72	1.68
PF07238	PilZ	1.68
PF00072	Response_reg	0.84
PF16697	Yop-YscD_cpl	0.84
PF01420	Methylase_S	0.84
PF10412	TrwB_AAD_bind	0.84
PF05050	Methyltransf_21	0.84
PF04851	ResIII	0.84
PF01527	HTH_Tnp_1	0.84
PF02769	AIRS_C	0.84
PF03466	LysR_substrate	0.84
PF06114	Peptidase_M78	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	4.20
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	4.20
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	4.20
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.68
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	0.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.50 %
All Organisms	root	All Organisms	39.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.50 %
cellular organisms	root	All Organisms → cellular organisms	39.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.84 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.81 %
Acidobacteria bacterium 13_1_20CM_3_58_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1.68 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.84 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.81 %
Acidobacteria bacterium 13_1_20CM_3_58_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.81 %
Acidobacteria bacterium 13_1_20CM_3_58_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1.68 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.81 %
Acidobacteria bacterium 13_1_20CM_3_58_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1.68 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10135102	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300002245\|JGIcombinedJ26739_101262083	Not Available	629	Open in IMG/M
3300002914\|JGI25617J43924_10000256	All Organisms → cellular organisms → Bacteria	10425	Open in IMG/M
3300002914\|JGI25617J43924_10016947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2475	Open in IMG/M
3300003505\|JGIcombinedJ51221_10095638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1177	Open in IMG/M
3300005172\|Ga0066683_10505498	Not Available	738	Open in IMG/M
3300005176\|Ga0066679_11021732	Not Available	514	Open in IMG/M
3300005180\|Ga0066685_10580799	Not Available	772	Open in IMG/M
3300005445\|Ga0070708_101036792	Not Available	769	Open in IMG/M
3300005458\|Ga0070681_10455096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1192	Open in IMG/M
3300005537\|Ga0070730_10664896	Not Available	662	Open in IMG/M
3300005555\|Ga0066692_10280037	Not Available	1056	Open in IMG/M
3300005557\|Ga0066704_10623466	Not Available	690	Open in IMG/M
3300005568\|Ga0066703_10640208	Not Available	616	Open in IMG/M
3300005591\|Ga0070761_10035373	All Organisms → cellular organisms → Bacteria	2795	Open in IMG/M
3300005610\|Ga0070763_10059619	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300005712\|Ga0070764_11070373	Not Available	510	Open in IMG/M
3300005921\|Ga0070766_10402271	Not Available	897	Open in IMG/M
3300006041\|Ga0075023_100185454	Not Available	792	Open in IMG/M
3300006797\|Ga0066659_11676279	Not Available	535	Open in IMG/M
3300006893\|Ga0073928_10665615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300007265\|Ga0099794_10088195	Not Available	1537	Open in IMG/M
3300007982\|Ga0102924_1001785	All Organisms → cellular organisms → Bacteria	24278	Open in IMG/M
3300009012\|Ga0066710_104588699	Not Available	516	Open in IMG/M
3300009038\|Ga0099829_11745439	Not Available	510	Open in IMG/M
3300009088\|Ga0099830_10610481	Not Available	895	Open in IMG/M
3300009088\|Ga0099830_10763461	Not Available	797	Open in IMG/M
3300009143\|Ga0099792_10828409	Not Available	608	Open in IMG/M
3300009839\|Ga0116223_10474285	Not Available	730	Open in IMG/M
3300010396\|Ga0134126_11903885	Not Available	651	Open in IMG/M
3300011269\|Ga0137392_10306965	All Organisms → cellular organisms → Bacteria → Acidobacteria	1312	Open in IMG/M
3300011269\|Ga0137392_10630067	Not Available	889	Open in IMG/M
3300011270\|Ga0137391_10580455	Not Available	942	Open in IMG/M
3300012096\|Ga0137389_10171481	Not Available	1791	Open in IMG/M
3300012096\|Ga0137389_11187777	Not Available	653	Open in IMG/M
3300012189\|Ga0137388_10609334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300012189\|Ga0137388_10804826	Not Available	871	Open in IMG/M
3300012198\|Ga0137364_10695649	Not Available	767	Open in IMG/M
3300012199\|Ga0137383_10407661	Not Available	996	Open in IMG/M
3300012200\|Ga0137382_10016991	All Organisms → cellular organisms → Bacteria	4075	Open in IMG/M
3300012202\|Ga0137363_10110248	All Organisms → cellular organisms → Bacteria → Acidobacteria	2106	Open in IMG/M
3300012202\|Ga0137363_11184104	Not Available	650	Open in IMG/M
3300012202\|Ga0137363_11407215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012203\|Ga0137399_10073836	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300012207\|Ga0137381_10227361	Not Available	1619	Open in IMG/M
3300012208\|Ga0137376_10218765	Not Available	1650	Open in IMG/M
3300012211\|Ga0137377_10036537	All Organisms → cellular organisms → Bacteria	4480	Open in IMG/M
3300012285\|Ga0137370_10775527	Not Available	595	Open in IMG/M
3300012349\|Ga0137387_10057188	Not Available	2621	Open in IMG/M
3300012349\|Ga0137387_10598486	Not Available	799	Open in IMG/M
3300012351\|Ga0137386_10658746	Not Available	753	Open in IMG/M
3300012356\|Ga0137371_10938862	Not Available	657	Open in IMG/M
3300012361\|Ga0137360_11172916	Not Available	664	Open in IMG/M
3300012363\|Ga0137390_10101469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2845	Open in IMG/M
3300012683\|Ga0137398_10021741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3497	Open in IMG/M
3300012685\|Ga0137397_10114296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1986	Open in IMG/M
3300012685\|Ga0137397_10529816	Not Available	877	Open in IMG/M
3300012918\|Ga0137396_10181413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1543	Open in IMG/M
3300012922\|Ga0137394_10016119	All Organisms → cellular organisms → Bacteria → Proteobacteria	5942	Open in IMG/M
3300012922\|Ga0137394_11020237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300012929\|Ga0137404_10035346	All Organisms → cellular organisms → Bacteria	3733	Open in IMG/M
3300012930\|Ga0137407_10525953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300012931\|Ga0153915_13035321	Not Available	546	Open in IMG/M
3300014495\|Ga0182015_10047270	Not Available	3172	Open in IMG/M
3300015054\|Ga0137420_1066268	Not Available	757	Open in IMG/M
3300015054\|Ga0137420_1170086	Not Available	1070	Open in IMG/M
3300015054\|Ga0137420_1454105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1885	Open in IMG/M
3300015264\|Ga0137403_10063048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3780	Open in IMG/M
3300017822\|Ga0187802_10441536	Not Available	516	Open in IMG/M
3300017934\|Ga0187803_10222150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300018034\|Ga0187863_10609947	Not Available	614	Open in IMG/M
3300018038\|Ga0187855_10741953	Not Available	572	Open in IMG/M
3300018040\|Ga0187862_10133087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1692	Open in IMG/M
3300018047\|Ga0187859_10323885	Not Available	837	Open in IMG/M
3300018433\|Ga0066667_10205573	Not Available	1451	Open in IMG/M
3300018468\|Ga0066662_11803894	Not Available	640	Open in IMG/M
3300020579\|Ga0210407_10223685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1464	Open in IMG/M
3300020579\|Ga0210407_10305695	Not Available	1242	Open in IMG/M
3300020581\|Ga0210399_10013392	All Organisms → cellular organisms → Bacteria	6446	Open in IMG/M
3300020582\|Ga0210395_10000004	All Organisms → cellular organisms → Bacteria	396819	Open in IMG/M
3300021088\|Ga0210404_10155093	Not Available	1203	Open in IMG/M
3300021170\|Ga0210400_10012324	All Organisms → cellular organisms → Bacteria	6842	Open in IMG/M
3300021170\|Ga0210400_10762319	Not Available	794	Open in IMG/M
3300021170\|Ga0210400_11356613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300021171\|Ga0210405_10035771	All Organisms → cellular organisms → Bacteria	3964	Open in IMG/M
3300021171\|Ga0210405_11169836	Not Available	571	Open in IMG/M
3300021181\|Ga0210388_10478314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300021420\|Ga0210394_10220073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1658	Open in IMG/M
3300021477\|Ga0210398_10088055	Not Available	2522	Open in IMG/M
3300021478\|Ga0210402_10435632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1218	Open in IMG/M
3300021559\|Ga0210409_10280073	Not Available	1506	Open in IMG/M
3300022557\|Ga0212123_10008107	All Organisms → cellular organisms → Bacteria	16241	Open in IMG/M
3300025921\|Ga0207652_11704420	Not Available	535	Open in IMG/M
3300026551\|Ga0209648_10000590	All Organisms → cellular organisms → Bacteria	27926	Open in IMG/M
3300027562\|Ga0209735_1120406	Not Available	572	Open in IMG/M
3300027643\|Ga0209076_1172501	Not Available	600	Open in IMG/M
3300027645\|Ga0209117_1011960	All Organisms → cellular organisms → Bacteria	2912	Open in IMG/M
3300027648\|Ga0209420_1054933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189	Open in IMG/M
3300027727\|Ga0209328_10152025	Not Available	704	Open in IMG/M
3300027855\|Ga0209693_10288419	Not Available	801	Open in IMG/M
3300027862\|Ga0209701_10281891	Not Available	961	Open in IMG/M
3300027889\|Ga0209380_10670408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300027895\|Ga0209624_10028205	All Organisms → cellular organisms → Bacteria → Proteobacteria	3568	Open in IMG/M
3300029943\|Ga0311340_10989694	Not Available	692	Open in IMG/M
3300030007\|Ga0311338_10944607	Not Available	843	Open in IMG/M
3300030043\|Ga0302306_10242132	Not Available	693	Open in IMG/M
3300030399\|Ga0311353_10637832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300030503\|Ga0311370_11745698	Not Available	636	Open in IMG/M
3300031236\|Ga0302324_102718986	Not Available	598	Open in IMG/M
3300031670\|Ga0307374_10515951	Not Available	637	Open in IMG/M
3300031708\|Ga0310686_100883367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300031753\|Ga0307477_10212572	Not Available	1344	Open in IMG/M
3300031753\|Ga0307477_10266663	Not Available	1185	Open in IMG/M
3300031753\|Ga0307477_10767310	Not Available	642	Open in IMG/M
3300031823\|Ga0307478_10057330	All Organisms → cellular organisms → Bacteria → Acidobacteria	2906	Open in IMG/M
3300032805\|Ga0335078_10184527	Not Available	2915	Open in IMG/M
3300033402\|Ga0326728_10006357	All Organisms → cellular organisms → Bacteria	31900	Open in IMG/M
3300033982\|Ga0371487_0481802	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.76%
Aquatic	Environmental → Aquatic	9.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.03%
Peat	Environmental → Terrestrial → Peat	6.72%
Freshwater	Environmental → Aquatic → Freshwater	5.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.52%
Sediment	Environmental → Aquatic → Sediment	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.23%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%
Clay	Environmental → Terrestrial → Soil → Clay	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.36%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.84%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.04%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.04%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.36%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.68%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.84%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101351022	3300001593	Forest Soil	MLQFPGPVPPGEIPPPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
JGIcombinedJ26739_1012620832	3300002245	Forest Soil	MLQFPGPVPPGEIPPPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD
JGI25617J43924_100002562	3300002914	Grasslands Soil	MLQFPAPVPHGEIPPPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
JGI25617J43924_100169474	3300002914	Grasslands Soil	MLQFPAPLPPGEIPPLTCFEQFILCFALVALSSALLSFFLPRPLFCKLFKIAFPFLPSQLGDDDAKD*
JGIcombinedJ51221_100956383	3300003505	Forest Soil	MPQFPAPLPPGEIPPLTCFEQFILCVALVTISTALLSFLLPRPLFCKLFKIAFPFMPEGIGDDDAKD*
Ga0066683_105054981	3300005172	Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFPCMPERIGDDDAKD*
Ga0066679_110217321	3300005176	Soil	MLQFSGPVPPGEIPPPACFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0066685_105807992	3300005180	Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0070708_1010367922	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLQFPAPLPPGEIPPLTCFEQFILCIALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDD
Ga0070681_104550963	3300005458	Corn Rhizosphere	MLQFPAPLPPGEIPPLTCFEQFILCIALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0070730_106648961	3300005537	Surface Soil	MLQFPAPVPPGEIPRPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERLEDTDDN*
Ga0066692_102800372	3300005555	Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0066692_103934031	3300005555	Soil	MLQLSGPVPPGEIPPPTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIA
Ga0066704_106234662	3300005557	Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFPFMPERSGEDDAKD*
Ga0066703_106402082	3300005568	Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAILTAVLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0070761_100353733	3300005591	Soil	MLQFPAPLPSGEIPRLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0070763_100596191	3300005610	Soil	MLQFPAPLRPGEIPRLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDGKD*
Ga0070764_110703732	3300005712	Soil	MLQFPAPLPPGEIPRLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0070766_104022712	3300005921	Soil	MLQFPAPLRPGEIPRLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERLEDFDEKD*
Ga0075023_1001854542	3300006041	Watersheds	MLQFPAPVPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0066659_116762791	3300006797	Soil	FSGPVPPGEIPPPTCFEQFILCVALVAIVTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0073928_106656152	3300006893	Iron-Sulfur Acid Spring	MLMLQFPAPVPPGDIPPASCFEQFILCLALVAISTALLSFFLPRPLFCKLFKIAFPFMPERLEDFDEKD*
Ga0099794_100881951	3300007265	Vadose Zone Soil	SRIFPCERTTLMLQFPAPLPPGEIPPPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0102924_100178515	3300007982	Iron-Sulfur Acid Spring	MLQFPAPLPPGEIPPLTSFEQFILCVALVAISTALLSFFLPRPLFCKLFRIAFPFMPERIGDDDAKD*
Ga0066710_1045886991	3300009012	Grasslands Soil	TLMLQFPAPLPPGEIPPLTCFEQFILCFALVALSSALLSFFLPRPLFCKLLKIAFPFLPSQLGDDDAKD
Ga0099829_117454392	3300009038	Vadose Zone Soil	APVPPGEIPPPTGFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERLEDTDDN*
Ga0099830_106104811	3300009088	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQFILCLALVALSTALLSFFLPRPLFCKLFRIAFPFMPDRLGDDDAKD*
Ga0099830_107634612	3300009088	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVGLSTALLSFFLPRPLFCKLFKIAFPFMPDRLEDFDEKD*
Ga0099792_108284091	3300009143	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQFILCFALVALSSALLSFFLPRPLFCKLFKIALPFMPERIGEDDAKD*
Ga0116223_104742852	3300009839	Peatlands Soil	MLQFPVPVPPGEIPPPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0134126_119038852	3300010396	Terrestrial Soil	MFQFPVPVPPGEIPPPTCFEQFILCVALVTISTALLSFFLPRPVFCKLFKIAFPFMPERIGDDDAKD*
Ga0137392_103069654	3300011269	Vadose Zone Soil	MLQFPAPLPPGEIPPLTGFEQFILCFALVALSSALLSFFLPRPLFCKLFKIAFPFLPSQLGDDDAKD*
Ga0137392_106300671	3300011269	Vadose Zone Soil	MLQFPAPVPPGDIPPSTCFEQLILCVALAAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137391_105804553	3300011270	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSLFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137389_101714811	3300012096	Vadose Zone Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAISTALLSLFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137389_111877771	3300012096	Vadose Zone Soil	MVQFPAPLPPGEIPPLTGFEQFILCFALVALSSALLSFFLPRPLFCKLFKIAFPFM
Ga0137388_106093343	3300012189	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTAVLSFFLPRPLFCKLFKIAFPFMPERLEDFDEKD*
Ga0137388_108048261	3300012189	Vadose Zone Soil	MVQFPAPLPPGEIPPLTGFEQFILCLALVALSTALLSFFLPRPLFCKVFRIAVPFMPDRLGDD
Ga0137364_106956492	3300012198	Vadose Zone Soil	MLQFPAPLPPREIPPLTCFEQFILCVALAAISTALLSFFLPRPVFCKLFKIAFPFMPDRIGDGDAKD*
Ga0137383_104076611	3300012199	Vadose Zone Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAIVTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137382_100169916	3300012200	Vadose Zone Soil	MLQFSGPVPLGEIPPPTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137363_101102487	3300012202	Vadose Zone Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAILTALLSFVLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137363_111841042	3300012202	Vadose Zone Soil	MLQFPAPLPPGEIPPPTCFEQFILCVVLVAISTALLSFFLPRPLFCNLFKIAFPFMPERIGDDDAKD*
Ga0137363_114072152	3300012202	Vadose Zone Soil	MLMLQFPAPLPAGEIPPLTCFEQFILCVALVGLSTALLSFFLPRPLFCKLFKIAFPFMPDQPEDLDEKD*
Ga0137399_100738361	3300012203	Vadose Zone Soil	MLQFPAPLPPGEIPPLTGFEHFILCFALVALSSAPLSFFLPRPLFCKLFKIAFPFMPERLEDWDDEK*
Ga0137381_102273616	3300012207	Vadose Zone Soil	PPPTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137376_102187651	3300012208	Vadose Zone Soil	VSRIFPCERTTLTLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137377_100365376	3300012211	Vadose Zone Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAILTALPSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137370_107755271	3300012285	Vadose Zone Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFTFLPSQLGDDDAKD*
Ga0137387_100571886	3300012349	Vadose Zone Soil	MLQLSGPVPPGEIPPPTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137387_105984862	3300012349	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQFILCFALVALSSALLSFFLPRPLFCKLFKIAFPFLPSQLGD
Ga0137386_106587462	3300012351	Vadose Zone Soil	MLQFPAPLPPGEIPPPTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137371_109388622	3300012356	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQLILCFALVALSSALLSFFLPRPLFCKLFKIAFPFLPSQLGDDDAKD*
Ga0137360_111729162	3300012361	Vadose Zone Soil	MLQFPAPLPPGEIPPPTCFEQFILCVVLVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGEDDAKD*
Ga0137390_101014696	3300012363	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCCELFMLCLAVVALSTALLSFFLPRPLFCKLFKIAFPFLPSQLGDDDAKD*
Ga0137398_100217417	3300012683	Vadose Zone Soil	FYITVSVSRIFPCERTTLMIQFPAPLPPGEIPPLTCFEQFILCFALVALSSALLSFFLPRPLFCKLFKIAFPFLPSQLGDDDAKD*
Ga0137397_101142963	3300012685	Vadose Zone Soil	MLMLQFPAPLPAGEIPPLTCFEQFILCVALVGLSAALLSFFLPRPLFCKLFKIAFPFMPDRLDDFDEKD*
Ga0137397_105298163	3300012685	Vadose Zone Soil	LQFPAPLPPGEIPPLTGFEQFILCFALVALSSALLSFFLPRPLFCKLFKIAFPFMPERLEDWDDEK*
Ga0137396_101814131	3300012918	Vadose Zone Soil	MLQFPAPLPPGEIPPLTGFEQFILCFALVALSSALLSFFLPRPLFCKLFKIAFPFLPSKLRDDDAKD*
Ga0137394_100161195	3300012922	Vadose Zone Soil	MLMLQFPAPLPAGEIPPLTCFEQFILCVALVGLSTALLSFFLPRPLFCK
Ga0137394_110202373	3300012922	Vadose Zone Soil	PLPAGEIPPLTCFEQFILCVALVGLSTALLSFFLPRPLFCKLFKIAFPFMPDRLDDFDEKD*
Ga0137404_100353466	3300012929	Vadose Zone Soil	MLQFSGPVPPEEIPPPTCFEQFILCVALVAMVTALLSFFLPRPLFCKLFKIAFPFMPDRLDDFDEKD*
Ga0137407_105259534	3300012930	Vadose Zone Soil	AFYITVSVSRISPRERATLMLQFPAPLPPGEIPPLTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFPFMPDRLEDFDEKD*
Ga0153915_130353211	3300012931	Freshwater Wetlands	MLQFPAPLPPGEIPPLTCFEQFILCVALVGLSTALLSFFLRRPLFCKLFKIAFPFMPDRLEDFDEKD*
Ga0182015_100472703	3300014495	Palsa	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERLEDFDEKD*
Ga0137420_10662681	3300015054	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGEDDAKD*
Ga0137420_11700863	3300015054	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVAMSTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137420_14541055	3300015054	Vadose Zone Soil	MLQFPAPVPSGEIPPPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0137403_100630484	3300015264	Vadose Zone Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD*
Ga0187802_104415361	3300017822	Freshwater Sediment	MLQFPIPVPPGEIPPPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD
Ga0187803_102221502	3300017934	Freshwater Sediment	MLQFPAPLPPGEIPPLTCFEQFILCVALVGLSTALLSFFLPRPLFCKLFKIAFPFMPDRLEDFDEKD
Ga0187863_106099471	3300018034	Peatland	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERLEDFDEKD
Ga0187855_107419532	3300018038	Peatland	MLQFPASLPPEEIPPLTSFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERLEDFDE
Ga0187862_101330872	3300018040	Peatland	MLQFPAPLPPGEIPPLTCFELFILCLAVVALSTALLSFFLPRPLFCKLFKIAFPFMPERLEDTDDN
Ga0187859_103238853	3300018047	Peatland	VSRAFPCERTTLMLQFPAPLPPGEIPPLTCFELFILCLAVVALSTALLSFFLPRPLFCKLFKIAFPFMPERLEDTDDN
Ga0066667_102055733	3300018433	Grasslands Soil	MLQFSGPVPPGEIPPPTCFEQFILCVALVAILTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD
Ga0066662_118038941	3300018468	Grasslands Soil	MLQFPAPLPPGEIPPLTCFEQFILCAALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD
Ga0210407_102236851	3300020579	Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVGLSTALLSFFLPRPLFCKLFKIAFPFMPDPLEDFDEKD
Ga0210407_103056953	3300020579	Soil	MLQFPAPLPPGEIPPLTCFEHFILCIALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDGKD
Ga0210399_100133927	3300020581	Soil	MLQFPAPLPPGEIPPLTRFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDGKD
Ga0210395_10000004109	3300020582	Soil	MPQFPAPLPPGEIPPLTCFQQFILCVALVTISTALLSFLLPRPLFCKLFKIAFPFMPEGIGDDDAKD
Ga0210404_101550933	3300021088	Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD
Ga0210400_100123245	3300021170	Soil	MLQFPAPLPPGEIPPLTCFELFMLCLAVVALSTALLSFFLPRPLFYKLFKIAFPFMPERLEDTDDN
Ga0210400_107623191	3300021170	Soil	MLQFPAPLPPGEIPPLTRFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD
Ga0210400_113566131	3300021170	Soil	MLMQFPAPPLPGGELPPPTHFEQFIACLVLVGLSTALVSFFLPRLLFCKLLKIAFPFMPDRLERSADK
Ga0210405_100357715	3300021171	Soil	MLQFPAPLPPGEIPPLTCFEQFILCIALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD
Ga0210405_111698361	3300021171	Soil	MPQFPAPLPPGEIPPLTCFEQFILCVALVTISTALLSFLLPRPLFCKLFKIAFPFMPEGIGDDDAKD
Ga0210388_104783143	3300021181	Soil	MLQFPAPVPPGDIPAPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPDRLEDFDEKD
Ga0210394_102200734	3300021420	Soil	MLQFPAPVPPGDIPPLTCFEQFILCLALVAISTALLSFFLPRPLFCKLFKIAFPFMPDRLEDFDEKD
Ga0210398_100880556	3300021477	Soil	LMLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERLEDFDEKD
Ga0210402_104356323	3300021478	Soil	MLQFPAPLPPGEIPPLTCFEQFILCIALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDGKD
Ga0210409_102800731	3300021559	Soil	MLQFPAPLPPGEIPPLTCFEHFILCIALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKN
Ga0212123_100081076	3300022557	Iron-Sulfur Acid Spring	MLQFPAPLPPGEIPPLTSFEQFILCVALVAISTALLSFFLPRPLFCKLFRIAFPFMPERIGDDDAKD
Ga0207652_117044202	3300025921	Corn Rhizosphere	MLQFPAPLPPGEIPPLTCFEQFILCIALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDD
Ga0209648_100005902	3300026551	Grasslands Soil	MLQFPAPVPHGEIPPPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD
Ga0209735_11204061	3300027562	Forest Soil	MLQFPAPLPPEKIPPLTRFEQVILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDAKD
Ga0209076_11725012	3300027643	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSLFLPRPLFCKLFKIAFPFLPSQLGDDDAKD
Ga0209117_10119606	3300027645	Forest Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVGLSTALLSFFLPRPLFCKLFKNAFPFMPDRLEDFDEKD
Ga0209420_10549331	3300027648	Forest Soil	PLPRGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMLERLEDFDEK
Ga0209328_101520252	3300027727	Forest Soil	MLQFPAPLPPGEIPPLTCFEHFILCIARVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDGKD
Ga0209693_102884192	3300027855	Soil	MLQFPAPLRPGEIPRLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERIGDDDGKD
Ga0209701_102818912	3300027862	Vadose Zone Soil	MLQFPAPLPPGEIPPLTCFEQFILCFALVALSSALLSFFLPRPLFCKLFRIAFPFMPDRLENRDDN
Ga0209380_106704082	3300027889	Soil	MLMLQFPAPLRPGEIPRLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERLEDFDEKD
Ga0209624_100282055	3300027895	Forest Soil	MLQFPAPIPPGDIPPPTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPDRLEDFDEKD
Ga0311340_109896942	3300029943	Palsa	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPE
Ga0311338_109446072	3300030007	Palsa	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPHPLFCKLFKIAFPFMPERLEDFDEK
Ga0302306_102421321	3300030043	Palsa	MLQFPAPLPPGEIPPLTCFEQFILCVALVALSTALLSFFLPRPLFRKLFKIAFPFMPERLEDFDEKD
Ga0311353_106378322	3300030399	Palsa	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPDRLEDFDEKD
Ga0311370_117456982	3300030503	Palsa	SRIPPCERTTLMLQFPAPLPPGEIPPLTCFEQFILCVALVALSTALLSFFLPRPLFRKLFKIAFPFMPERLEDFDEKD
Ga0302324_1027189862	3300031236	Palsa	MLQFPAPLPPGEIPPLTCFEQFILCVALVAISTALLSFFLPHPLFCKLFKIAFPFMPERLEDFDEKD
Ga0307374_105159511	3300031670	Soil	MLQFAAPLPPGEIPPLTCFEQFILCLALVALSTALLSFFLPRPLFCKLFKIAFPFMP
Ga0310686_1008833672	3300031708	Soil	MLQFPAPLPPGEIPPLTCFEQFILCVALVAVSTALLSFFLPRPLFCKLFKIAFPFMPERLEDFDEKD
Ga0307477_102125722	3300031753	Hardwood Forest Soil	MLQLPAPLPAGEIPPLTCFEQFILCVALVALSTALLSFFLPRPLFCTVFKIAFPFMPDRLDDCDEKD
Ga0307477_102666631	3300031753	Hardwood Forest Soil	MIQFPAPVPPGEIPQPTCFEQFILCLALVAISTGLLSFFLPRPLFCKLFRIAFPFMPDRLEDFDENN
Ga0307477_107673102	3300031753	Hardwood Forest Soil	MLQFPAPLPPGEIPPLTCFELFMLCLAVVALSTALLSFFLPRPLFCKLFKIAFPFMPERLEDKDDN
Ga0307478_100573302	3300031823	Hardwood Forest Soil	MLQFPAPLPPGEIPPLTCFKQFILCVALVAISTALLSFFLPRPLFCKLFKIAFPFMPERVGDDDAKD
Ga0335078_101845272	3300032805	Soil	MLQFPASVPPGDIPPPTCFEQFILCLALVAISTALLSFFLPRPLFCKLFKIAFPFMPDRLEDFDEKD
Ga0326728_1000635723	3300033402	Peat Soil	MFQFPTPVPTGDIPPPTCFEQFILCLALVAISTALLSFFLPRPLFCKLFKIAFPFMPDRLEDFDEKD
Ga0371487_0481802_54_263	3300033982	Peat Soil	MLMFQFPTPVPTGDIPPPTCFEQFILCLALVAISTALLSFFLPRPLFCKLFKIAFPFMPDRLEDFDEKD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074603

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign