Metagenome Family F074723

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074723
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	66 residues
Representative Sequence	MASIAQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVAKTRTSVRNNP
Number of Associated Samples	101
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.83 %
% of genes near scaffold ends (potentially truncated)	33.61 %
% of genes from short scaffolds (< 2000 bps)	93.28 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.387 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.244 % of family members)
Environment Ontology (ENVO)	Unclassified (47.059 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.866 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 84.38% β-sheet: 0.00% Coil/Unstructured: 15.62%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13545	HTH_Crp_2	2.52
PF04392	ABC_sub_bind	2.52
PF00027	cNMP_binding	1.68
PF12536	DUF3734	1.68
PF01872	RibD_C	1.68
PF11534	HTHP	1.68
PF07883	Cupin_2	0.84
PF16868	NMT1_3	0.84
PF06210	DUF1003	0.84
PF13193	AMP-binding_C	0.84
PF05638	T6SS_HCP	0.84
PF00589	Phage_integrase	0.84
PF05974	DUF892	0.84
PF00512	HisKA	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.52
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.68
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.68
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.84
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.84
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.03 %
Unclassified	root	N/A	33.61 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.50 %
Unclassified	root	N/A	33.61 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.84 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	55.46 %
Unclassified	root	N/A	33.61 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.68 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	28.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.68 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	13.45 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.84 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.84 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.84 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.84 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Hyphomicrobium sp. 802	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 802	0.84 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.84 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02IN6O4	Not Available	519	Open in IMG/M
2170459010\|GIO7OMY02GT3KG	Not Available	528	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0355850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	669	Open in IMG/M
3300002459\|JGI24751J29686_10071752	Not Available	715	Open in IMG/M
3300003152\|Ga0052254_1101376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 802	543	Open in IMG/M
3300004114\|Ga0062593_103259007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	520	Open in IMG/M
3300005093\|Ga0062594_102078395	Not Available	610	Open in IMG/M
3300005163\|Ga0066823_10016846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1096	Open in IMG/M
3300005164\|Ga0066815_10043282	Not Available	721	Open in IMG/M
3300005294\|Ga0065705_10118861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3155	Open in IMG/M
3300005328\|Ga0070676_10724825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	728	Open in IMG/M
3300005329\|Ga0070683_100572295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1080	Open in IMG/M
3300005330\|Ga0070690_100866260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	704	Open in IMG/M
3300005331\|Ga0070670_100622482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	967	Open in IMG/M
3300005334\|Ga0068869_101108651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	693	Open in IMG/M
3300005334\|Ga0068869_101368265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300005335\|Ga0070666_10003745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9218	Open in IMG/M
3300005337\|Ga0070682_101380411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	602	Open in IMG/M
3300005338\|Ga0068868_100430825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1144	Open in IMG/M
3300005343\|Ga0070687_100993919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	608	Open in IMG/M
3300005347\|Ga0070668_100792069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	842	Open in IMG/M
3300005347\|Ga0070668_102075652	Not Available	525	Open in IMG/M
3300005354\|Ga0070675_101808735	Not Available	563	Open in IMG/M
3300005354\|Ga0070675_102225561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300005366\|Ga0070659_100394220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1168	Open in IMG/M
3300005439\|Ga0070711_100019450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4356	Open in IMG/M
3300005439\|Ga0070711_101961253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	515	Open in IMG/M
3300005455\|Ga0070663_100403042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1118	Open in IMG/M
3300005457\|Ga0070662_101808254	Not Available	528	Open in IMG/M
3300005543\|Ga0070672_100933751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	767	Open in IMG/M
3300005544\|Ga0070686_101041991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	673	Open in IMG/M
3300005546\|Ga0070696_101987143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300005548\|Ga0070665_100329812	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300005549\|Ga0070704_100686617	Not Available	907	Open in IMG/M
3300005618\|Ga0068864_101940889	Not Available	595	Open in IMG/M
3300005719\|Ga0068861_101805156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	607	Open in IMG/M
3300005834\|Ga0068851_10832830	Not Available	575	Open in IMG/M
3300005841\|Ga0068863_100314529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1520	Open in IMG/M
3300005841\|Ga0068863_100991645	Not Available	842	Open in IMG/M
3300005841\|Ga0068863_101470609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	690	Open in IMG/M
3300005844\|Ga0068862_101770663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	627	Open in IMG/M
3300006049\|Ga0075417_10319692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	756	Open in IMG/M
3300006755\|Ga0079222_10365225	Not Available	984	Open in IMG/M
3300006852\|Ga0075433_10591187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	975	Open in IMG/M
3300006852\|Ga0075433_11312711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	627	Open in IMG/M
3300006854\|Ga0075425_101607496	Not Available	732	Open in IMG/M
3300006903\|Ga0075426_10639839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	795	Open in IMG/M
3300006904\|Ga0075424_100188313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2190	Open in IMG/M
3300006904\|Ga0075424_100266854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1820	Open in IMG/M
3300009092\|Ga0105250_10262777	Not Available	739	Open in IMG/M
3300009162\|Ga0075423_10356109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1535	Open in IMG/M
3300009176\|Ga0105242_10996012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	845	Open in IMG/M
3300009177\|Ga0105248_10413430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1519	Open in IMG/M
3300009177\|Ga0105248_11360080	Not Available	803	Open in IMG/M
3300009551\|Ga0105238_10889454	Not Available	909	Open in IMG/M
3300009553\|Ga0105249_10239330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1794	Open in IMG/M
3300010362\|Ga0126377_10420422	Not Available	1352	Open in IMG/M
3300010371\|Ga0134125_10077694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3694	Open in IMG/M
3300010373\|Ga0134128_10855668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1007	Open in IMG/M
3300010403\|Ga0134123_11848623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	659	Open in IMG/M
3300012481\|Ga0157320_1008831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	750	Open in IMG/M
3300012491\|Ga0157329_1037901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	529	Open in IMG/M
3300012498\|Ga0157345_1009366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	835	Open in IMG/M
3300012505\|Ga0157339_1022184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	684	Open in IMG/M
3300012955\|Ga0164298_10675888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	721	Open in IMG/M
3300012957\|Ga0164303_10007250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3651	Open in IMG/M
3300012957\|Ga0164303_11432498	Not Available	518	Open in IMG/M
3300012960\|Ga0164301_10680917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	771	Open in IMG/M
3300012961\|Ga0164302_11627471	Not Available	538	Open in IMG/M
3300012984\|Ga0164309_11342797	Not Available	607	Open in IMG/M
3300012987\|Ga0164307_10866496	Not Available	724	Open in IMG/M
3300013105\|Ga0157369_10745636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1008	Open in IMG/M
3300013297\|Ga0157378_11792384	Not Available	662	Open in IMG/M
3300014326\|Ga0157380_11384200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	753	Open in IMG/M
3300014968\|Ga0157379_10636632	Not Available	997	Open in IMG/M
3300017792\|Ga0163161_10948746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	732	Open in IMG/M
3300017792\|Ga0163161_11156487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	667	Open in IMG/M
3300018028\|Ga0184608_10097204	Not Available	1226	Open in IMG/M
3300019879\|Ga0193723_1023742	All Organisms → cellular organisms → Bacteria → Proteobacteria	1871	Open in IMG/M
3300022756\|Ga0222622_10158236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1468	Open in IMG/M
3300024245\|Ga0247677_1039571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	684	Open in IMG/M
3300025321\|Ga0207656_10748628	Not Available	501	Open in IMG/M
3300025904\|Ga0207647_10173865	All Organisms → cellular organisms → Bacteria → Nitrospirae	1253	Open in IMG/M
3300025907\|Ga0207645_10059806	All Organisms → cellular organisms → Bacteria → Proteobacteria	2433	Open in IMG/M
3300025907\|Ga0207645_11023913	Not Available	559	Open in IMG/M
3300025916\|Ga0207663_10215780	Not Available	1393	Open in IMG/M
3300025918\|Ga0207662_10243334	Not Available	1178	Open in IMG/M
3300025924\|Ga0207694_10666525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	877	Open in IMG/M
3300025933\|Ga0207706_10465978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1092	Open in IMG/M
3300025937\|Ga0207669_10185358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1496	Open in IMG/M
3300025961\|Ga0207712_10261956	Not Available	1403	Open in IMG/M
3300025961\|Ga0207712_11922455	Not Available	530	Open in IMG/M
3300025972\|Ga0207668_10528235	Not Available	1019	Open in IMG/M
3300025986\|Ga0207658_10986936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	768	Open in IMG/M
3300026035\|Ga0207703_10937900	Not Available	829	Open in IMG/M
3300026035\|Ga0207703_11907934	Not Available	570	Open in IMG/M
3300026067\|Ga0207678_10766623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	851	Open in IMG/M
3300027787\|Ga0209074_10294851	Not Available	646	Open in IMG/M
3300027873\|Ga0209814_10537956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300028380\|Ga0268265_12617685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	510	Open in IMG/M
3300028381\|Ga0268264_10813572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	934	Open in IMG/M
3300031170\|Ga0307498_10010169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1864	Open in IMG/M
3300031170\|Ga0307498_10127539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300031226\|Ga0307497_10295961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	740	Open in IMG/M
3300031231\|Ga0170824_126076916	All Organisms → cellular organisms → Bacteria → Proteobacteria	1142	Open in IMG/M
3300031538\|Ga0310888_10169059	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300031562\|Ga0310886_10227236	Not Available	1032	Open in IMG/M
3300031820\|Ga0307473_10378931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	920	Open in IMG/M
3300031892\|Ga0310893_10002962	All Organisms → cellular organisms → Bacteria	4158	Open in IMG/M
3300031908\|Ga0310900_10130400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1668	Open in IMG/M
3300031908\|Ga0310900_10580290	Not Available	883	Open in IMG/M
3300031940\|Ga0310901_10399553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	598	Open in IMG/M
3300031943\|Ga0310885_10761094	Not Available	548	Open in IMG/M
3300032122\|Ga0310895_10082746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1267	Open in IMG/M
3300032122\|Ga0310895_10297481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	762	Open in IMG/M
3300032179\|Ga0310889_10057472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1542	Open in IMG/M
3300032180\|Ga0307471_100946049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1029	Open in IMG/M
3300032180\|Ga0307471_103189541	Not Available	581	Open in IMG/M
3300032205\|Ga0307472_100341659	Not Available	1225	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.78%
Environmental	Environmental	46.22%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.78%
Terrestrial	Environmental → Terrestrial	43.70%
Aquatic	Environmental → Aquatic	2.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.33%
Sediment	Environmental → Aquatic → Sediment	1.68%
Freshwater	Environmental → Aquatic → Freshwater	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.97%
Loam	Environmental → Terrestrial → Soil → Loam	9.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.68%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.24%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.68%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.36%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.36%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	3.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.68%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012481	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.1.yng.040610	Host-Associated	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_05866630	2170459005	Grass Soil	MATISQRERAERLFRWKQDSVKALAACGSKEQAARLHTAKLRAERLEREARFVAKTKTTS
F62_02873770	2170459010	Grass Soil	MATISQRERAERLFRWKQDSVKALSACGSKEQAARLHTAKLRAEWLEREARFVAKTKTTS
ICChiseqgaiiDRAFT_03558501	3300000033	Soil	MASIAQKERAERLFRWKQDGEKALSEXGSKEQXTRLLTAKLRAERLAREAHLVAKTKTTLCWRLGGRLRCVGQSLSTQRE*
JGI24751J29686_100717522	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRXLTAKLRAERLAREARVVSKSG
Ga0052254_11013761	3300003152	Sediment	MASIAQKERLERLLRWKQDGVKALSEHGSKEQTTRLLTAKLRAERLAREARVVSKNRTSVRDNP*
Ga0062593_1032590071	3300004114	Soil	MASIAQKERAERLFRWKQDGEKALSEHGSKEQTTRLLTAKLRAERLAREAHLVAKTKTTLCWRLGGRL
Ga0062594_1020783952	3300005093	Soil	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVRDNP*
Ga0066823_100168462	3300005163	Soil	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRVLTAKLRAERLAREARVVSKSGTSMRNDP*
Ga0066815_100432822	3300005164	Soil	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKTGRACGTTRDNTRAH*
Ga0065705_101188614	3300005294	Switchgrass Rhizosphere	MASIAQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVAKTRTSVRNNP*
Ga0070676_107248251	3300005328	Miscanthus Rhizosphere	MATISQKERAERLFRWKQDSVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHHDAKSPPF*
Ga0070683_1005722952	3300005329	Corn Rhizosphere	MATISHKERAERLFRWKQDPVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAKSPPF*
Ga0070690_1008662601	3300005330	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGEKALSEHGSKEQATRLLTAKLRAERLAREAHLVAKTKTTLCWRLGGLRCVGQSLSTQRE*
Ga0070670_1006224822	3300005331	Switchgrass Rhizosphere	MATISHKERAERLFRWKQDPVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHHDAKSPPF*
Ga0068869_1011086511	3300005334	Miscanthus Rhizosphere	MATISHKERAERLFRWKQDPVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTH
Ga0068869_1013682652	3300005334	Miscanthus Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRVLTAKLRAERLAREARVVSK
Ga0070666_1000374516	3300005335	Switchgrass Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKSGTSMRNDP*
Ga0070682_1013804112	3300005337	Corn Rhizosphere	MATISHKERAERLFRWKQDSVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAKSPPF*
Ga0068868_1004308252	3300005338	Miscanthus Rhizosphere	MATISQKERAERLFRWKQDSVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAKSPPF*
Ga0070687_1009939192	3300005343	Switchgrass Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRMLTAKLRAERLAREAHLVAKTKTSVRINP*
Ga0070668_1007920691	3300005347	Switchgrass Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVAKTRTSVRNNP*
Ga0070668_1020756521	3300005347	Switchgrass Rhizosphere	VDGHDVELWEGDRLVMDFFTIQEKSKELSNMALKAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVRDNP*
Ga0070675_1018087351	3300005354	Miscanthus Rhizosphere	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREARVVAKTRTSVRNNP*
Ga0070675_1022255612	3300005354	Miscanthus Rhizosphere	MATISHKERAERLFRWKQDPVNALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAKSPPF*
Ga0070659_1003942202	3300005366	Corn Rhizosphere	MATISHKERAERLFRWKQDPVKALSESATKEQATPVLTAKLRVERLAREARLVAKTRTSRGTTHHDAKSPPF*
Ga0070711_1000194509	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRVLTAKLRAERLAREARVVSKTGTSMRNDP*
Ga0070711_1019612531	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MATISHKERAERLFRWKQDSVKALSECATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHHDAKSSPF*
Ga0070663_1004030422	3300005455	Corn Rhizosphere	MATISQKERAERLFRWKQDPVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAKSPPF*
Ga0070662_1018082541	3300005457	Corn Rhizosphere	SNMASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVRDNP*
Ga0070672_1009337512	3300005543	Miscanthus Rhizosphere	MATISHKERAERLFRWKQDPVKALSESAIKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAKSPPF*
Ga0070686_1010419912	3300005544	Switchgrass Rhizosphere	MATISQKERAERLFRWKQDSVKALSECATKEQATRVLTAKLRVERLAREARLVAKTRT
Ga0070696_1019871432	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MASIAQKERAERLFRWKQDGEKALSEHGSKEQTTRLLTAKLRAERLAREAHLVAKTKTTLCWRLGGRLRCVGQSLSTQRE*
Ga0070665_1003298123	3300005548	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGEKALSEHGSKEQATRLLTAKLRAERLAREAHLVAKTKTSVRINP*
Ga0070704_1006866173	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKSGTSMRNDP*
Ga0068864_1019408891	3300005618	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGVKALSEHGSKEQATRMLTAKLRAERLAREAHFVAKTKTSVRINP*
Ga0068861_1018051561	3300005719	Switchgrass Rhizosphere	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRAS
Ga0068851_108328301	3300005834	Corn Rhizosphere	ERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKSGTSMRNDP*
Ga0068863_1003145293	3300005841	Switchgrass Rhizosphere	MATISHKERAERLFRWKQDPVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAK
Ga0068863_1009916453	3300005841	Switchgrass Rhizosphere	NMASIKQKERLERLFRWKQDGVKALSEHGSKEQATRVLTAKLRAERLAREARVVSKSGTSMRNDP*
Ga0068863_1014706092	3300005841	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREAHFVAKTKTSVRINP*
Ga0068862_1017706633	3300005844	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKSGTSMRNDP*
Ga0075417_103196922	3300006049	Populus Rhizosphere	MASIAQKERFERLFRWKQDGVKALSEYGSKEQATRLLTAKLRAERLAREARVVAKTRTSVRNNP*
Ga0079222_103652253	3300006755	Agricultural Soil	RLFRWKQDGVKALSEHGSKEQATRVLTAKLRAERLAREARVVSKTGTSMRNDP*
Ga0075433_105911873	3300006852	Populus Rhizosphere	MASIAQKERFERLFRWKQDGVKALSEHGSKEQATRMLTAKLRAERLAREAHFVAKTKTSVRI
Ga0075433_113127111	3300006852	Populus Rhizosphere	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERFAREASVVSKTRA
Ga0075425_1016074961	3300006854	Populus Rhizosphere	KRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKPRASVRDNP*
Ga0075426_106398393	3300006903	Populus Rhizosphere	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTSKLRAERLAREASVVSKPRASVRDNP*
Ga0075424_1001883131	3300006904	Populus Rhizosphere	LERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVAKTRTSVRNNP*
Ga0075424_1002668543	3300006904	Populus Rhizosphere	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKPRASVRDNP*
Ga0105250_102627773	3300009092	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGEKALSEHGSKEQATRLLTAKLRAERLAREAHFVAKTKTSVRINP*
Ga0075423_103561091	3300009162	Populus Rhizosphere	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERFAREASVVSKTRASVRDNP*
Ga0105242_109960122	3300009176	Miscanthus Rhizosphere	MASIAQKKRRERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVRDNP*
Ga0105248_104134302	3300009177	Switchgrass Rhizosphere	MATISHKERAERLFRWKQDPVNALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHHDAKSPPF*
Ga0105248_113600801	3300009177	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGEKALSEHGSKEQATRLLTAKLRAERLAREARVVAKTRTNVRNNP*
Ga0105238_108894541	3300009551	Corn Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREAHFVAKTKTSVRINP*
Ga0105249_102393305	3300009553	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGEKALSEHGSKEQATRLLTAKLRAERLAREASVVSKTRASVRDNP*
Ga0126377_104204223	3300010362	Tropical Forest Soil	MASIAQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKTRTSVRNNP*
Ga0134125_100776942	3300010371	Terrestrial Soil	MASIAQKERAERLFRWKQDGEKALSEHGSKEQATRLLTAKLRAERLAREAHLVAKTKTTLCWRLGGRLRCVGQSLSTQRE*
Ga0134128_108556682	3300010373	Terrestrial Soil	MASIAQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVAKTRTNVRNNP*
Ga0134123_118486232	3300010403	Terrestrial Soil	MASIAQKERAERLFRWKQDGEKALSEHGSKEQATRMLTAKLRAERLAREAHFVAKTKTSVRINP*
Ga0157320_10088312	3300012481	Arabidopsis Rhizosphere	MASIAQKERAERLFRWKQDCVKALSEHGSKEQATRLLTAKLRAERLAREASVVSKPRASVRDNP*
Ga0157329_10379011	3300012491	Arabidopsis Rhizosphere	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKPRASARDNP*
Ga0157345_10093662	3300012498	Arabidopsis Rhizosphere	MASIAQKERAERLFRWKQDGVKALSEHGSKEQATRLLTARLRAERLAREAHFVAKTKTSVRINP*
Ga0157339_10221841	3300012505	Arabidopsis Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKTGTSMRNDP*
Ga0164298_106758881	3300012955	Soil	MASIAQKERLERLFRWKQDGVKALSEHGSKEQATRLLTSKLRAERLAREARVVAKTRTSVQNNP*
Ga0164303_100072508	3300012957	Soil	NMASIKQKERLERLFRWKQDGVKALSEHGSKEQATRVLTAKLRAERLAREARVVSKTGTSMRNDP*
Ga0164303_114324981	3300012957	Soil	NMASIKQKERLERLFRWKQDGVKALSEHGSKEQATRVLTAKLRAERFAREASVVSKTRASVRDNP*
Ga0164301_106809171	3300012960	Soil	MATISQKERAERLFRWKQASVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAKSPPF*
Ga0164302_116274711	3300012961	Soil	RLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVRDNP*
Ga0164309_113427972	3300012984	Soil	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKSGTSMRNDP*
Ga0164307_108664961	3300012987	Soil	LERLFRWKQDGVKALSEQGSKEQATRLLTAKLRAERLAREARVVAKTRTNVRNNP*
Ga0157369_107456362	3300013105	Corn Rhizosphere	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVQDNP*
Ga0157378_117923841	3300013297	Miscanthus Rhizosphere	ERLFRWKQDPVKALSESATKEQATRVLTAKLRVQRLAREARLVAKTRTSRGTTHDDAKSPPF*
Ga0157380_113842002	3300014326	Switchgrass Rhizosphere	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVQDNPSQHEDTLTLKPAS*
Ga0157379_106366321	3300014968	Switchgrass Rhizosphere	MQEKSKELSNMASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVRDNP*
Ga0163161_109487462	3300017792	Switchgrass Rhizosphere	MATISHKERAERLFRWKQDPVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAKSPPF
Ga0163161_111564871	3300017792	Switchgrass Rhizosphere	MASIAQKERLERLFRWKQDGVKALSEQGSKEQATRLLTAKLRAERLARGARVVAKTRTHVRNNP
Ga0184608_100972041	3300018028	Groundwater Sediment	MPSITSIKKERAERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARLVAKTRTSVRNNP
Ga0193723_10237421	3300019879	Soil	MPSITSIKKERAERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREAHFVAKTRTSVRINP
Ga0222622_101582361	3300022756	Groundwater Sediment	MATISQRERAERLFRWKQDSVKALSACGSKEQAARLHTAKLRAERLEREARFVAKTKTTS
Ga0247677_10395711	3300024245	Soil	MATISHKERAERLFRWKQDPVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHHDAKS
Ga0207656_107486282	3300025321	Corn Rhizosphere	QEKTKELWNMASIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKSGTSMRNDP
Ga0207647_101738653	3300025904	Corn Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREAHFVAKTKTSVRINP
Ga0207645_100598064	3300025907	Miscanthus Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVAKTRTNVRNNP
Ga0207645_110239132	3300025907	Miscanthus Rhizosphere	MATISQKERAERLFRWKQDSVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHHDAKSPPF
Ga0207663_102157803	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKTGTSMRNDP
Ga0207662_102433343	3300025918	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGVKALSEHGSKEQATRMLTAKLRAERLAREAHLVAKTKTSVRINP
Ga0207694_106665252	3300025924	Corn Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRMLTAKLRAERLAREASVVSKTRASVQDNP
Ga0207706_104659784	3300025933	Corn Rhizosphere	SKELSNMASIAQKERAERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKSGTSMRNDP
Ga0207669_101853581	3300025937	Miscanthus Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRVLTAKLRVERLAREARLVAKTRTSCGTTHDDAKSPPF
Ga0207712_102619562	3300025961	Switchgrass Rhizosphere	NMASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVRDNP
Ga0207712_119224552	3300025961	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGEKALSEHGSKEQATRLLTAKLRAERLAREAHLVAKTKTTLCWRLGGRLRCVGQSLSTQRE
Ga0207668_105282351	3300025972	Switchgrass Rhizosphere	MASIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVAKTRTSVRNNP
Ga0207658_109869362	3300025986	Switchgrass Rhizosphere	MATISHKERAERLFRWKQDPVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAKS
Ga0207703_109379001	3300026035	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGEKALSEHGSKEQATRLLTAKLRAERLAREAHLVAKTKTALCWRLGGRLRCVGQSLSTQRE
Ga0207703_119079342	3300026035	Switchgrass Rhizosphere	DFFTIQEKSKELSNMASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVRDNP
Ga0207678_107666232	3300026067	Corn Rhizosphere	MATISQKERAERLFRWKQDPVKALSESATKEQATRVLTAKLRVERLAREARLVAKTRTSRGTTHDDAKSPPF
Ga0209074_102948511	3300027787	Agricultural Soil	KQKERLERLFRWKQDGVKALSEHGSKEQATRVLTAKLRAERLAREARVVSKSGTSMRNDP
Ga0209814_105379561	3300027873	Populus Rhizosphere	MASIAQKERFERLFRWKQDGVKALSEYGSKEQATRLLTAKLRAERLAREARVVAKTRTSVRNNP
Ga0268265_126176851	3300028380	Switchgrass Rhizosphere	MASIAQKERAERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREAHFVAK
Ga0268264_108135721	3300028381	Switchgrass Rhizosphere	MATISHKERAERLFRWKQDPVKALSESATKEQATRVLTAKLRVERLAREARLDAKTRTSRGTTHDDAKSPPF
Ga0307498_100101692	3300031170	Soil	MATISQKERAERLFRWKQDSVKALSEYGSREQAARLLTAKLHAERLAREARFVAKTRTSVRNNP
Ga0307498_101275393	3300031170	Soil	RAERLFRWKQDSVKAFSACGSKEQAARLHTAKLRAERLEREARFVAKTKTTS
Ga0307497_102959611	3300031226	Soil	MATISQKERAERLFRWKQDSVKALSEYGSREQAARLLTARLHAERLAREARFVAKTRTSVRNNP
Ga0170824_1260769162	3300031231	Forest Soil	MATISQKERAERLFRWKQDSVKALSACGSKEQAARLHTAKLRAEWLEREARFVAKTKTTS
Ga0310888_101690592	3300031538	Soil	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTSKLRAERLAREASVVSKPRASVRDNP
Ga0310886_102272364	3300031562	Soil	MASIAQKERAERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREAHFVAKTKTSVRINP
Ga0307473_103789312	3300031820	Hardwood Forest Soil	MASIAQKERLERLFRWKQDGVKALSEQGSKEQATRLLMAKLRAERLAREARVVAKTRTNVRNNHDNTRTH
Ga0310893_100029622	3300031892	Soil	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKPRASVRDNP
Ga0310900_101304004	3300031908	Soil	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKP
Ga0310900_105802902	3300031908	Soil	IAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASVRDN
Ga0310901_103995531	3300031940	Soil	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERLAREASVVSKTRASV
Ga0310885_107610942	3300031943	Soil	MASIVQKERAERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKSGTSMRNDP
Ga0310895_100827461	3300032122	Soil	LWNMASIQQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREAHFVAKTKTSVRINP
Ga0310895_102974812	3300032122	Soil	MASIAQRERAERLFRWKQDGEKALSEHGSKEQATRLLTAKLRAERLAREAHLVAKTKTSVRINP
Ga0310889_100574721	3300032179	Soil	MASIAQKKRLERLLRWKQDGVKALSEHGRKEQATRLLTAKLRAERFAREASVVSKTRASVRDNP
Ga0307471_1009460493	3300032180	Hardwood Forest Soil	MSSIKQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKSGTSMRNDP
Ga0307471_1031895412	3300032180	Hardwood Forest Soil	AQKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVAKTRTSVRNNP
Ga0307472_1003416591	3300032205	Hardwood Forest Soil	QKERLERLFRWKQDGVKALSEHGSKEQATRLLTAKLRAERLAREARVVSKSGTSMRNDP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074723

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences