Metagenome Family F074724

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074724
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	134 residues
Representative Sequence	MQKMLQNEVSQLLEEVGQLAQQGEREKAYQSSLRATSLAPDEPLAWYLRSQSAPSTEEQLMCLSRAYSLDPKAPDAKKELRTAVHRLLKQEPFLAYVHETEEFYQVRSGRDLLINVPKNRTFETPYLQKA
Number of Associated Samples	88
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.96 %
% of genes near scaffold ends (potentially truncated)	96.64 %
% of genes from short scaffolds (< 2000 bps)	94.96 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.387 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (26.891 % of family members)
Environment Ontology (ENVO)	Unclassified (31.933 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.580 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.90% β-sheet: 9.49% Coil/Unstructured: 38.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.1.30: FAT domain	d4jspa3	4jsp	0.70401
a.118.8.1: Tetratricopeptide repeat (TPR)	d1a17a_	1a17	0.69972
a.118.8.1: Tetratricopeptide repeat (TPR)	d2vyia_	2vyi	0.69146
a.118.8.0: automated matches	d5lypa1	5lyp	0.68447
a.118.8.1: Tetratricopeptide repeat (TPR)	d1ihga1	1ihg	0.68352

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13676	TIR_2	2.52
PF04545	Sigma70_r4	2.52
PF00076	RRM_1	1.68
PF13487	HD_5	0.84
PF03425	CBM_11	0.84
PF03412	Peptidase_C39	0.84
PF00535	Glycos_transf_2	0.84
PF02417	Chromate_transp	0.84
PF00221	Lyase_aromatic	0.84
PF09992	NAGPA	0.84
PF01797	Y1_Tnp	0.84
PF00400	WD40	0.84
PF03471	CorC_HlyC	0.84
PF04023	FeoA	0.84
PF04232	SpoVS	0.84
PF02518	HATPase_c	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	0.84
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.84
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.84
COG2359	Stage V sporulation protein SpoVS, predicted DNA-binding, AlbA superfamily	Function unknown [S]	0.84
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
All Organisms	root	All Organisms	33.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
cellular organisms	root	All Organisms → cellular organisms	33.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	17.65 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.84 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	6.72 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	3.36 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	1.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.84 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.84 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.72 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	1.68 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.84 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.84 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.84 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.84 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.72 %
Candidatus Roizmanbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Roizmanbacteria	1.68 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.84 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.84 %
Sediminimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sediminimonas	0.84 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.84 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.72 %
Candidatus Roizmanbacteria bacterium CG09_land_8_20_14_0_10_41_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Roizmanbacteria → Candidatus Roizmanbacteria bacterium CG09_land_8_20_14_0_10_41_9	1.68 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	0.84 %
Smaragdicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus	0.84 %
Sediminimonas qiaohouensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sediminimonas → Sediminimonas qiaohouensis	0.84 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.84 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.72 %
Candidatus Roizmanbacteria bacterium CG09_land_8_20_14_0_10_41_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Roizmanbacteria → Candidatus Roizmanbacteria bacterium CG09_land_8_20_14_0_10_41_9	1.68 %
Anditalea	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Anditalea	0.84 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	0.84 %
Smaragdicoccus niigatensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus → Smaragdicoccus niigatensis	0.84 %
Sediminimonas qiaohouensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sediminimonas → Sediminimonas qiaohouensis	0.84 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.72 %
Candidatus Roizmanbacteria bacterium CG09_land_8_20_14_0_10_41_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Roizmanbacteria → Candidatus Roizmanbacteria bacterium CG09_land_8_20_14_0_10_41_9	1.68 %
Anditalea andensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Anditalea → Anditalea andensis	0.84 %
Anaeromyxobacter dehalogenans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	0.84 %
Smaragdicoccus niigatensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus → Smaragdicoccus niigatensis	0.84 %
Sediminimonas qiaohouensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sediminimonas → Sediminimonas qiaohouensis	0.84 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_380198_length_1221_cov_7.096642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1253	Open in IMG/M
2162886013\|SwBSRL2_contig_13791253	Not Available	801	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2273698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1489	Open in IMG/M
3300000787\|JGI11643J11755_11742930	Not Available	540	Open in IMG/M
3300003321\|soilH1_10370919	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300003999\|Ga0055469_10004979	All Organisms → cellular organisms → Bacteria	2355	Open in IMG/M
3300004114\|Ga0062593_100415971	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Roizmanbacteria → Candidatus Roizmanbacteria bacterium CG09_land_8_20_14_0_10_41_9	1209	Open in IMG/M
3300004114\|Ga0062593_102004721	Not Available	643	Open in IMG/M
3300004114\|Ga0062593_102767918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sediminimonas → Sediminimonas qiaohouensis	559	Open in IMG/M
3300004157\|Ga0062590_100694790	Not Available	915	Open in IMG/M
3300004157\|Ga0062590_102178381	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Anditalea → Anditalea andensis	580	Open in IMG/M
3300004480\|Ga0062592_100763300	Not Available	851	Open in IMG/M
3300004643\|Ga0062591_101721889	Not Available	636	Open in IMG/M
3300004643\|Ga0062591_101794620	Not Available	625	Open in IMG/M
3300005294\|Ga0065705_10032899	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Roizmanbacteria → Candidatus Roizmanbacteria bacterium CG09_land_8_20_14_0_10_41_9	1806	Open in IMG/M
3300005294\|Ga0065705_10958083	Not Available	559	Open in IMG/M
3300005295\|Ga0065707_10115895	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300005295\|Ga0065707_10773808	Not Available	607	Open in IMG/M
3300005295\|Ga0065707_10905245	Not Available	565	Open in IMG/M
3300005406\|Ga0070703_10276569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	691	Open in IMG/M
3300005466\|Ga0070685_11068257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus → Smaragdicoccus niigatensis	609	Open in IMG/M
3300005467\|Ga0070706_100044577	All Organisms → cellular organisms → Bacteria	4097	Open in IMG/M
3300005549\|Ga0070704_101632340	Not Available	595	Open in IMG/M
3300005549\|Ga0070704_101735243	Not Available	577	Open in IMG/M
3300005617\|Ga0068859_101519420	Not Available	739	Open in IMG/M
3300005844\|Ga0068862_101523501	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005887\|Ga0075292_1067502	Not Available	535	Open in IMG/M
3300006049\|Ga0075417_10046050	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300006049\|Ga0075417_10284841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	799	Open in IMG/M
3300006755\|Ga0079222_10311897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1035	Open in IMG/M
3300006844\|Ga0075428_101188584	Not Available	804	Open in IMG/M
3300006845\|Ga0075421_100250854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	2169	Open in IMG/M
3300006845\|Ga0075421_101503727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	736	Open in IMG/M
3300006845\|Ga0075421_101710156	Not Available	680	Open in IMG/M
3300006845\|Ga0075421_101795224	Not Available	660	Open in IMG/M
3300006846\|Ga0075430_100573338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	931	Open in IMG/M
3300006847\|Ga0075431_100329796	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300006847\|Ga0075431_100637591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1047	Open in IMG/M
3300006847\|Ga0075431_101178292	Not Available	729	Open in IMG/M
3300006876\|Ga0079217_10553491	Not Available	732	Open in IMG/M
3300006880\|Ga0075429_100279429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1462	Open in IMG/M
3300006880\|Ga0075429_100808036	Not Available	821	Open in IMG/M
3300006880\|Ga0075429_100816592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	816	Open in IMG/M
3300006880\|Ga0075429_100998110	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300006880\|Ga0075429_101979301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	504	Open in IMG/M
3300006904\|Ga0075424_101684160	Not Available	672	Open in IMG/M
3300006918\|Ga0079216_10346225	Not Available	905	Open in IMG/M
3300006969\|Ga0075419_10820011	Not Available	667	Open in IMG/M
3300007004\|Ga0079218_11499976	Not Available	730	Open in IMG/M
3300007004\|Ga0079218_12791751	Not Available	585	Open in IMG/M
3300009053\|Ga0105095_10083446	Not Available	1728	Open in IMG/M
3300009094\|Ga0111539_12124807	Not Available	651	Open in IMG/M
3300009100\|Ga0075418_11321032	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300009146\|Ga0105091_10445399	Not Available	651	Open in IMG/M
3300009147\|Ga0114129_10127568	All Organisms → cellular organisms → Bacteria	3497	Open in IMG/M
3300009147\|Ga0114129_10875391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1140	Open in IMG/M
3300009147\|Ga0114129_12535736	Not Available	612	Open in IMG/M
3300009147\|Ga0114129_12906835	Not Available	566	Open in IMG/M
3300009147\|Ga0114129_13078644	Not Available	546	Open in IMG/M
3300009156\|Ga0111538_12965710	Not Available	593	Open in IMG/M
3300009157\|Ga0105092_10089210	Not Available	1684	Open in IMG/M
3300009162\|Ga0075423_10427883	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300009162\|Ga0075423_11289835	Not Available	780	Open in IMG/M
3300009166\|Ga0105100_10848395	Not Available	568	Open in IMG/M
3300009553\|Ga0105249_12153492	Not Available	630	Open in IMG/M
3300009678\|Ga0105252_10302685	Not Available	713	Open in IMG/M
3300010038\|Ga0126315_10911957	Not Available	584	Open in IMG/M
3300010041\|Ga0126312_11005856	Not Available	610	Open in IMG/M
3300010041\|Ga0126312_11131684	Not Available	575	Open in IMG/M
3300010042\|Ga0126314_11313575	Not Available	542	Open in IMG/M
3300010045\|Ga0126311_11436166	Not Available	576	Open in IMG/M
3300010047\|Ga0126382_12030068	Not Available	548	Open in IMG/M
3300010166\|Ga0126306_10880043	Not Available	725	Open in IMG/M
3300010166\|Ga0126306_11345982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	590	Open in IMG/M
3300010373\|Ga0134128_11419103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	765	Open in IMG/M
3300010397\|Ga0134124_10664368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1028	Open in IMG/M
3300011119\|Ga0105246_10935860	Not Available	780	Open in IMG/M
3300011442\|Ga0137437_1134906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	852	Open in IMG/M
3300011442\|Ga0137437_1176420	Not Available	741	Open in IMG/M
3300012157\|Ga0137353_1052751	Not Available	740	Open in IMG/M
3300012174\|Ga0137338_1129027	Not Available	554	Open in IMG/M
3300012204\|Ga0137374_10535685	Not Available	903	Open in IMG/M
3300012351\|Ga0137386_11036336	Not Available	582	Open in IMG/M
3300012353\|Ga0137367_10622896	Not Available	754	Open in IMG/M
3300012358\|Ga0137368_10193892	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300012360\|Ga0137375_11083995	Not Available	623	Open in IMG/M
3300012360\|Ga0137375_11444514	Not Available	509	Open in IMG/M
3300012361\|Ga0137360_10701065	Not Available	869	Open in IMG/M
3300012676\|Ga0137341_1045792	Not Available	729	Open in IMG/M
3300012951\|Ga0164300_10634811	Not Available	636	Open in IMG/M
3300012961\|Ga0164302_11383009	Not Available	573	Open in IMG/M
3300014325\|Ga0163163_13318342	Not Available	502	Open in IMG/M
3300015359\|Ga0134085_10590818	Not Available	515	Open in IMG/M
3300017997\|Ga0184610_1021951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1727	Open in IMG/M
3300018053\|Ga0184626_10449527	Not Available	507	Open in IMG/M
3300018056\|Ga0184623_10523329	Not Available	503	Open in IMG/M
3300018076\|Ga0184609_10432523	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300020003\|Ga0193739_1020664	Not Available	1716	Open in IMG/M
3300025165\|Ga0209108_10081700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1758	Open in IMG/M
3300025313\|Ga0209431_10631996	Not Available	799	Open in IMG/M
3300025313\|Ga0209431_10947776	Not Available	613	Open in IMG/M
3300025795\|Ga0210114_1062891	Not Available	760	Open in IMG/M
3300025961\|Ga0207712_11598682	Not Available	584	Open in IMG/M
3300025961\|Ga0207712_12145344	Not Available	500	Open in IMG/M
3300026095\|Ga0207676_11390582	Not Available	698	Open in IMG/M
3300026116\|Ga0207674_11538296	Not Available	634	Open in IMG/M
3300027731\|Ga0209592_1165987	Not Available	787	Open in IMG/M
3300027743\|Ga0209593_10272563	Not Available	585	Open in IMG/M
3300027873\|Ga0209814_10031782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2174	Open in IMG/M
3300027880\|Ga0209481_10275381	Not Available	851	Open in IMG/M
3300027909\|Ga0209382_10672298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1118	Open in IMG/M
3300027909\|Ga0209382_10784553	Not Available	1016	Open in IMG/M
3300031852\|Ga0307410_11372552	Not Available	620	Open in IMG/M
3300031901\|Ga0307406_11352415	Not Available	623	Open in IMG/M
3300031903\|Ga0307407_10647827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	791	Open in IMG/M
3300032002\|Ga0307416_103367259	Not Available	535	Open in IMG/M
3300032126\|Ga0307415_101440218	Not Available	657	Open in IMG/M
3300034128\|Ga0370490_0163255	Not Available	731	Open in IMG/M
3300034818\|Ga0373950_0077972	Not Available	688	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.50%
Host-Associated	Host-Associated	39.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	45.38%
Plants	Host-Associated → Plants	39.50%
Aquatic	Environmental → Aquatic	15.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.29%
Sediment	Environmental → Aquatic → Sediment	8.40%
Freshwater	Environmental → Aquatic → Freshwater	5.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.36%
Marine	Environmental → Aquatic → Marine	1.68%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	34.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.40%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.36%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	34.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.52%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	26.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.04%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.04%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.52%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.84%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.84%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012676	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT433_2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01044110	2140918013	Soil	MQKNLQNEVSQLLEEAGQFARQGKREKAYKSCLKATTVAPDEPLAWYARSQNAPSREEQLMCLSHAYSLAPSHPEAKEELRTAVHALLKQEPFLAYVYETEQFYQVRSGRDLLI
SwBSRL2_0615.00006370	2162886013	Switchgrass Rhizosphere	MQKSLQTEVSQLLEEAGKFAQQGEREKAYQSSLKATGVAPNEPLAWYLRSRSAPSTEEQLMCLSRAYSLDPNLPDTKKELRTAVRTLLKQEPFLAYVYETREFYQVRSGRELLINIPKNRTFEIPYLKKSPGLAQPAFRWLSLSLLALFLGGVGAVILAPVA
ICChiseqgaiiDRAFT_22736981	3300000033	Soil	MQPKIKPEVTPLLEEVQRLVQRGEREKAYQSSLRATSLAPDEPLAWYLRAQAAPSTEEQLMCLSRAYSLDSTAADTKKELRTAIHGLLKQEPFLAYVHETEELY
JGI11643J11755_117429301	3300000787	Soil	MQKNLQNEVSQLLEEAGQFARQGKREKAYKSCLKATTVAPDEPLAWYARSQNAPSREEQLMCLSHAYSLAPSHPEAKEELRTAVHALLKQEPFLAYVYETEQFYQVRSGRDLLINIPKNRTFETPYLKKKPGLAQPA
soilH1_103709192	3300003321	Sugarcane Root And Bulk Soil	MQKKLRNEVEQLLEEAGQFAQQGEREKAYQSSLRATSVAPNEPLAWYLRSQSAPSAEERLMCLSRAYSLDPNYSDTKKELRTAVQTLLKQEPFLAYVYETEAFYQVRSGRELLINIPKNRTF
Ga0055469_100049791	3300003999	Natural And Restored Wetlands	MQNNLQTEVSQLLEGVENFARQGRRQKAYELSLRATSLAPNEPRAWYLRSLNAPSREEQLMCLSHAYSLDPNHLEAKKDLRAAVHTLLKQEPFLAYVYETEQFYQVRSGRDLLINIPKDRAFETSYL
Ga0062593_1004159713	3300004114	Soil	MEKKFQPEVSQLLDEVGQFIRQGKREQAYQSSLRATSLVPDEPLAWYLRSQVAPSPEEQLMCLSRAYSLDTAHPETQQELRTAVQALLKQEPFLGYVHETPE
Ga0062593_1020047212	3300004114	Soil	MQKKLQPEVSQLLDEVGQFIRQGKREQAYQSSLRATSLVPDEPLAWYMRSQVAPSPEEQLMCLSRAYSLDTAHPETQQELRTAVQALLKQEPFLGYVHETPE
Ga0062593_1027679181	3300004114	Soil	MKQILQTEISQLLDEVGKLAQQGEREKAYQSSLKATAVAPDAALAWHLRAQNALSTEERLMCLSRAYSLDPDYPETKEDLRTAVQTLLKQESFLAYVYETEEFYQVRSGREMLINIPKNRAFELPYLKKKPGPAQPAFRW
Ga0062590_1006947902	3300004157	Soil	MEKKFQPEVSQLLDEVGQFIRQGKREQAYQSSLRATSLVPDEPLAWYLRSQVAPSSEEQLMCLSRAYSLDTAHPETQQELRTAVQALLKQEPFLGYVHETPEFYQVRSGRDLLINIPKNRVFE
Ga0062590_1021783811	3300004157	Soil	MQNELETKVSQLLEEVELAVRRGEREKAYQVSLEATGLAPDEPMAWYVRSQHAASQEEKLMCLSRAYSLDTTRPEAKKELRTAIQELLRQEPFLAYVYETPELYQVRSGRELLINIPKNRVYETPYLHRKPSPLSPAFRWLNMALLGLLLGGLGAIVLAPIAVFQVL
Ga0062592_1007633002	3300004480	Soil	MQKNLQIEVSQLLEEAEQFARKGEREKAYLSSLRATSAAPDEPLAWYLRSQNAASVEEQVMCLSRAYSLDTAYPDAKKELRIAVQALLKQEPFLAFVHETQEFYQVRSGRDLLINIPKDR
Ga0062591_1017218891	3300004643	Soil	MQKNLQIEVSQLLEEAEQFARKGEREKAYLSSLRATSAAPDEPLAWYLRSQNAASVEEQVMCLSRAYSLDTAYPDAKKELRIAVQALLKQEPFLAFVHETQEFYQVRSGRDLLINIPKDRNFEI
Ga0062591_1017946201	3300004643	Soil	MKQILQTEISQLLDEVGKLARQGEREKAYQSSLKATAVAPDAALAWHLRAQNALSTEERLMCLSRAYSLDPDYPETKEDLRTAVQTLLKQESFLAYVYETEEFYQVRSGREMLINIPKNRAFELPYLKKKPGPAQPAFRWLS
Ga0065705_100328991	3300005294	Switchgrass Rhizosphere	MQKKLQPEVSQLLDEVGQFIRQGKREQAYQSSLRATSLVPDEPLAWYLRSQVAPSPEEQLMCLSRAYSLDTAHPETQQELRTAVQALLKQEPFLGYVHETPEFYQVRSGRDLLINIPKNRVFEKPYLQEPPGLARPAFLWVTIALLGLMLGGV
Ga0065705_109580831	3300005294	Switchgrass Rhizosphere	MDNKQKTDVSRLLDVAGHLARQGEREKAYQCSLEATSVAPDEPLAWYLRSQTAASNEERLMCLSRAYSLDPNYPETQEALRTAVHTLLKQEPFLAYVYETEEFYQVRSGRELLINIPKNRTYEIPYLKKKPGLAQPAFRWLAWSLLALFLGGVGAV
Ga0065707_101158951	3300005295	Switchgrass Rhizosphere	MQKNLQTEVSQLLEEAGQFARQGKREKAYQSCLKATTVAPDESLAWYARSRNAPSREEQLMCLSRAYSLDPNDPETKKELHSAVHTLLKQEPFLAYVYETEQFYQVRSGRDLLVNIPKNRTFETPYLKKRPGLAQPAFRWLTF
Ga0065707_107738081	3300005295	Switchgrass Rhizosphere	MQKKLQIEVSQLLEEAGQFAQQGEREKAYLSSLRATSAAPDEPLAWYLRSQNAASVEEQVMCLSRAYSLDTAYPDAKKELRIAVQALLKQEPFLAFVHETEEFYQVRSGRDLLINIPKNRNFE
Ga0065707_109052451	3300005295	Switchgrass Rhizosphere	MQKKLQPEVSQLLDEVGQFIQQGKREQAYQSSLRATSLVPDEPLAWYMRSQVAPSSEEQLMCLSRAYSLDTAHSETQKELRTAVQALLKQEPFLGYVH
Ga0070703_102765691	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPKNFQSDVSQLLEEVEQLTRQGELDKAHQTSLQATSLAPDDPRAWYLRSQAARSTEEKLMCLSRAVSLDPNYPELQSKLRSSIQALLKQEPFLAYVHENPEFYQVRSGRDLLINVPKNRMFETPYLKKKPGLTQP
Ga0070685_110682571	3300005466	Switchgrass Rhizosphere	MQKKLQNEVSQLLEEVGQLTRQGEREKAYQTSLQATSLAPDEPRAWYLRAQAASSTEEKLMCLSRAVSLDPNYPELQSELRSSIQALLKQEPFLAYVHENEEFYQVRSGRDLLINVPKNRTFETPYLKKKPELTQPAFRWLNYSVLALLLGGVGAVLLAP
Ga0070706_1000445771	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MQKRLQTEVSQLLEEVGQLAQQGEREKAYQSSLKATSMAPDEPLAWYLRSQAAPSPEERLMCLSRAYSLDTAFPDAKKELRTAVQTLLKQEPFLAYVHETEEFYQVRSGRDLLVNIPKNRAFEKLYLQKTPEFSRPAFRWLSISLLALFLGGV
Ga0070704_1016323401	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MQKKLQTEVSQLLEEVGQLAQQGEREKAYQSSLRATSLAPDVPLAWYLRSRAAASSEEQLMCLSRAYSLDPNFPDVKKELRTAVQTLLKQEPFLAYVHETEEFYQVRSGRDLLINIPKNRTFEIPYLKKAPGLARPAFCWLAFSVLALILGGVGAVF
Ga0070704_1017352431	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MQKMLPTEIAQLLEEAGQFAQQGKRELAYQSSLKATRLSPNEPQAWYLRSQTSASAEEQLMCLSRAYSLDPKYSDAKNDLRIAVQGLLKQEPFLAYVHETDEFYQVRSGRELLVNIPKNRTFEIPYLKKKPGLA
Ga0068859_1015194202	3300005617	Switchgrass Rhizosphere	MQKKLQNEVSQLLEEVGQLTRQGEREKAYQTSLQATSLAPDEPRAWYLRAQAASSTEEKLMCLSRAVSLDPNYPELQSELRSSIQALLKQEPFLAYVHENEEFYQVRSGRDLLINVPKNRTFETPYLKKK
Ga0068862_1015235013	3300005844	Switchgrass Rhizosphere	MQESLPVEVSRLLADAEESARQGKRETAYLSSLKATSLAPQEPLAWYLRSQSAPSSEEQLICLSRAYSLNPDFMDAKKELRAAVQGLLKQEPFLAYVHET
Ga0075292_10675021	3300005887	Rice Paddy Soil	MQKKLQTEVSQLLEEVGRLTQQGEREKAYQSSLKATSLAPDEARAWYLRSQTAPSTEEQLMCLSRAYSLDTAFPDVKKELRTALRGILKQEPFLAYVYETEEFYQVRSGR
Ga0075417_100460504	3300006049	Populus Rhizosphere	MQKRLQTEVSQLLEEVGQLAQQGEREKAYQSSLKATSMAPDEPLAWYLRSQAAPSPEERLMCLSRAYSLDTAFPDAKKELRTAVQTLLKQEPFLAYVHETEEFYQVRSGRDLLVNIPKNRAFEKPYLQKTPEFSRPAFRWLSISLLALFLGGVGASCWLPLRRFRRCDYKRPPPPAEIECGCGLSSFFL*
Ga0075417_102848411	3300006049	Populus Rhizosphere	MQKSLQTEVSQLLEEAGKFAQQGEREKAYQSSLKATSVAPNEPLAWYLRSRSAPSTEEQLMCLSRAYSLDPNLPDTKKELRTAVQTLLKQEPFLAYVYETQEFYQVRSGRELLINIPKNMTFEIPYLKKSPGLAQPAFRWLSLSLLALFLGGVGA
Ga0079222_103118972	3300006755	Agricultural Soil	MQKKLQTEVSQLLEEVGQLAQHGDREKSYQSSLKATSLAPDEPLAWYLRSQAAASSEEQLMCLSRVYSLDPNFPGVKTELRTAVQTLLKQEPFLAYVHE
Ga0075428_1011885842	3300006844	Populus Rhizosphere	MQKQLPAEVAQLLEEVGQLVQQGEREQAYRHSLRATSAAPDEPLAWYLRSQAAPSPEEQLMCLSRAYSLDPAFPPVQQDLHSAIHGLLKQEPFLAYVYETQEFYQVRSGRDLLVNIPKNR
Ga0075421_1002508542	3300006845	Populus Rhizosphere	MQKSLQTEVSQLLEEAGKFAQQGEREKAYQSSLKATSVAPNEPLAWYLRSRSAPSTEEQLMCLSRAYSLNPNLPDTKKELRTAVRTLLKQEPFLAYVYET
Ga0075421_1015037272	3300006845	Populus Rhizosphere	MQPKIKPEVTPLLEEVQRLVQRGEREKAYQSSLRATSLAPDEPLAWYLRAQAAPSTEEQLMCLSRAYSLDSTAADTKKELRTAIHGLLKQEPFLAYVHETEELYQVRSGRDLLINIPKNRVFERPYL
Ga0075421_1017101562	3300006845	Populus Rhizosphere	MQKQLQTEISQLLEEAETFARQGKREKAYQASLKATTIAPDEPLAWYLRSRSAPSREEQLMCLSHAYSLAPDHLETRQELHSAVHGLLKQEPFLAYVYETEQYYQVRSGRDLLINIPKNRTFE
Ga0075421_1017952241	3300006845	Populus Rhizosphere	MRKKLQTEVSQLLEEVGQLVQRGEREKAYQSSLRATSVAPDVPLAWYLRSQAAPSLEEQLMCLSRAYSLDPGFPDAKKELRTAVHGLLKQEPFLAYVHETEELYQVRSGRDLLINIPKNRVFETPYLQKAPGLARPAFRWLSLSLLA
Ga0075430_1005733381	3300006846	Populus Rhizosphere	MQKQLQSEISQLLEETGQLIQRGKREKAYQSSLRATSLAPDEPLAWYLRSQAAPSTEEKLMCLSRAYSLDSADPETKKELRTAIRALLKQEPFLAYVHETEAFYQVRSGRDLLINIPKNRIFETPYLRKVPG
Ga0075431_1003297963	3300006847	Populus Rhizosphere	MQRKLQANVSQLLEEAGRLAQQGERHKAYQSSLKATSLAPDEPLAWYSRSQNALSTEEQLLCLSRAYSLDPSDWDTRKELHAAVHTLVQQEPFLAYVYETEEFYQVRSGRDLLINIPKNRTFETPYLKKKPGLAQPAF
Ga0075431_1006375912	3300006847	Populus Rhizosphere	MQKQLQTEISQLLEEAETFARQGKREKAYQASLKATTIAPDEPLAWYLRSRSAPSREEQLMCLSHAYSLAPDHLATRQELHSAVHGLLKQEPFLAYVYETDQYYQVRSGRDLLINIPK
Ga0075431_1011782921	3300006847	Populus Rhizosphere	MQKKLPTEVEQLLEEAGRFAQQGEHEKAYRSSLKATSVAPNEPLAWYLRSQSAPSTEERLMCLSRAYSLDPNYSDTKKELHTAVQTLLRQEPFLAYVYETEEFYQVRSGRDLLINIPKNRTFETPYLKKVP
Ga0079217_105534912	3300006876	Agricultural Soil	MQKQLQAEVSQLLEEARTLVQQGKREKAYQSSLKATSVAPEEPLAWYLRAQSAASTEEQLMCLSRAYSLDPNYPDVKQELHTAIHTLLKQEPFLAYVYETEGFYQVRSGRDLLIN
Ga0075429_1002794291	3300006880	Populus Rhizosphere	MQKQLQTEISQLLEEAETFARQGKREKAYQASLKATTIAPDEPLAWYLRSRSAPSREEQLMCLSHAYSLAPDHLETRQELHSAVHGLLKQEPFLAYVYETEQYYQVRSGRDLLINIPKNRTFETPYLKKKPGIAQPAFRWLSLA
Ga0075429_1008080362	3300006880	Populus Rhizosphere	MQKKLQPEVSQLLDEVGQFIRQGKREQAYQSSLRATSLVPDEPLAWYMRSQVAPSSEEQLMCLSRAYSLDTAHSETQKELRTAVQALLKQEPFLGYVHETPEFYQVRSGRDLLINIPK
Ga0075429_1008165923	3300006880	Populus Rhizosphere	MQKQLQSEISQLLEETGQLIQRGKREKAYQSSLRATSLAPDEPLAWYLRSQAAPSTEEKLMCLSRAYSLDSADPETKKELRTAIRALLKQEPFLAYVHETEAFYQVRSGRDLLINIPKNRIFETPY
Ga0075429_1009981101	3300006880	Populus Rhizosphere	MQKKLPTEVEQLLEEAGRFAQQGEHEKAYRSSLKATSVAPNEPLAWYLRSQSAPSTEERLMCLSRAYSLDPNYSDTKKELHTAVQTLLRQEPFLAYVYETEEFYQVRSGRDLLINIPKNR
Ga0075429_1019793011	3300006880	Populus Rhizosphere	MQKSLQTEVSQLLEEAGKFAQQGEREKAYQSSLKATSVAPNEPLAWYLRSRSAPSTEEQLMCLSRAYSLNPNLPDTKKELRTAVQTLLKQEPFLAYVYETQEFYQVRSGRELLINIPKNRTFEIPYLKRSPGLAQPAFRWLSLSLLALFLGGVGAVILAP
Ga0075424_1016841601	3300006904	Populus Rhizosphere	MQKKLQTEVSQLLEEVGQLVQQGEREKAYQSSLKATNVAPDEPLAWYLRSQAAASSEEQLMCLSRAYSLDPTFPDVKKELRMAVQTLLKQEPFLAYVYETEKFYQVRSGRDLLINIPKNRNFEIPYLKKAPGLAKPAFRWLSFSMLALILGGVGAVFLAPIAAFQA
Ga0079216_103462252	3300006918	Agricultural Soil	MENKLQAEVSQLLEEAGRFAQQGKREKAYQTSLRATTIAPDEPLAWYIRSQNAPSREEQLMCLSHAYSLAPDHTETKQELRTAVHNLLKQEPFLAYVYETEQFYQVRSGRDLLINIPKDRTFETPYLKKKPGLAQPAFRWLSIALLALFLGGVGAVLF
Ga0075419_108200111	3300006969	Populus Rhizosphere	MQKQLQTEISQLLEEAETFARQGKREKAYQASLKATTIAPDEPLAWYLRSRSAPSREEQLMCLSHAYSLAPDHLETRQELHSAVHGLLKQEPFLAYVYETEQYYQVRSGRDLLINIPKNRTFETPYLKKKPGIAQPAFRWLSLALLALFL
Ga0079218_114999761	3300007004	Agricultural Soil	MQKMLQTEIAQLLEEAVQLAQQGKRQKAYQSSLKATSLAPNEALAWYLRSQTSASTEEQLMCLSRAYSLDPNFSDAKKDLRIAVQGLLKQEPFLAYVHETAEFYQVRSGSEMLVNIPKDRTFEI
Ga0079218_127917511	3300007004	Agricultural Soil	MQKMLQTEIAQLLEEAEQLARQGKREKAYQMSLKATSIAPNEPRGWYLRSQTSASSEEQLMCLSRTYSLDTKFSDAKEDLRIAVQGLLKQEPFLAYVHE
Ga0105095_100834461	3300009053	Freshwater Sediment	MKGVWEFSGHLMQKELQTDISRLLDEARQFARQGKREKAYQSSLKATSVAPDVPLAWYLRAQTAPSPEEQLMCLSRAYSLNPAFPEAKNELRTAVQALLKQEPFLAYVHETEEFYQVRSGLDLLINIPKNRTFEKPYLQRAPGPAKPAFRWLSISLLALFLGGVGAIVLAP
Ga0111539_121248071	3300009094	Populus Rhizosphere	MQKQLQTDISQLLEEAGTLARQGKREKAYQVTLKATTIAPDEPLAWYLRSRSAPSREEQLMCLSHAYSLAPDHLETRQELHSAVHGLLKQEPFLAYVYETEQYYQVRSGRDLLINIPKDRTFETPYLKKKPGIAQPAFRWL
Ga0075418_113210322	3300009100	Populus Rhizosphere	MQESLPVEVSRLLADAEESARQGKRETAYQSSLKATSLAPQEPLAWYLRSQSAPSSEEQLICLSRAYSLNPDFLDAKRELRAAVQGLLKQEPFLAYVHETEVLYQ
Ga0105091_104453991	3300009146	Freshwater Sediment	MQKKPQTEVSQLLEEVRQLAQQGKREKAYQSSLRATSVAPDESLAWYFRAQNAPSTEERLMCLSRAYSLDPKYLGTKDDLRTAVQALLKQEPFLAYVYETEEFYQVRSGRDLLINIPKNRTFETPYLKKAPGLAQPAFRWLSLSILALFFGGVGAVLFAPIAAFQ
Ga0114129_101275681	3300009147	Populus Rhizosphere	MQKSLQTEVSQLLEEAGKFAQQGEREKAYQSSLKATSVAPNEPLAWYLRSRSAPSTEEQLMCLSRAYSLDPNLPDTKKELRTAVRTLLKQEPFLAYVYETREFYQVRSGRELLINIPKNRTFEIPYLKKSPGLAQPAFRWLSLSLLALFLGGVGAVILAPVAAFQA
Ga0114129_108753911	3300009147	Populus Rhizosphere	MQKQLQTEISQLLEEAETFARQGKREKAYQASLKATTIAPDEPLAWYLRSRSAPSREEQLMCLSHAYSLAPDHLETRQELHSAVHGLLKQEPFLAYVYETEQYYQVRSGRDLLINIPKNRTFETPYLKKKPGIAQPAFRWLSL
Ga0114129_125357361	3300009147	Populus Rhizosphere	MQKKLQTEVFQLLEEVGQLTRQGEREKAYQSSLRATSLAPDEPRAWYMRSQVAPSTEEKLMCLSRAVSLDPNYPEIQNELRTAIQALLRQEPFLAYVHENPEFYQVRSGRDLLINVPKNRTFETPYLKKKPGLAQPAFRWLNYSV
Ga0114129_129068351	3300009147	Populus Rhizosphere	MQKQLQSEISQLLEETGQLIQRGKREKAYQSSLRATSLAPDEPLAWYLRSQAAPSTEEKLMCLSRAYSLDSADPETKKELRTAIRALLKQEPFLAYVHETEAFYQVRSGRDLLINIPKNRIFETPYLRKAPGPAEPAFRWLSLSLLFLFLGGVGAVLLAPI
Ga0114129_130786441	3300009147	Populus Rhizosphere	MPKQLRPEVSQLLEETGQFVQQGKREKAYQSSLRATSIAPDEPLAWYLRSQTAPSSEEQLMCLSRAYSLDTTYPDAKKELRTAVQSLLKQEPFLAYVHETQEFYQVRSGRDLLINIPKNR
Ga0111538_129657101	3300009156	Populus Rhizosphere	MQNQLQTEVSQLLEEAGTLARQGKREKAYQASLKATTIAPDEPLAWYLRSRSAPSREEQLMCLSHAYSLAPDHLETRQELHSAVHGLLKQEPFLAYVYETEQYYQVRSGRDLLINIPKDR
Ga0105092_100892101	3300009157	Freshwater Sediment	MQNELESQVFHLLEEAERSAEQGKRAKAYQSSLRATTIAPDAPRAWYLRAQSAPSTEEQLMCLSRAYSLDPNYPEIKKELHLAVHTLLKQEPFLAYVHETEE
Ga0075423_104278831	3300009162	Populus Rhizosphere	MQKMRPDDVSRLLEEAGQLAQQGKREKAYQFSLKATSLAPDEPLAWYLRSQNAPSTEEQLMCLSRAYSLDPKYPDAKKELRSAVHTLLKQEPFLAYVYETEEFYQVRSGRDLLFNIPTNRLFEKPYLQKAPEVTQVAFRW
Ga0075423_112898352	3300009162	Populus Rhizosphere	MQNKLETKVSQLLEEVELAVRRGEREKAYQVSLEATGLAPDDPMAWYLRSQNAPSQEEKLMCLSRAYSLDTTRSEAKKELRTAIQELLRQEPFLAYVYETRELYQVRSGRELLINIPKNQVYETPYLYRKPSPVS
Ga0105100_108483951	3300009166	Freshwater Sediment	MQKKLQSEVSQLLEEAGIFAQQGKREKAYQSSLRATTSAPDEPLAWYLRSQNAPSREEQLMCLSHAYSLAPNHLETTTELRAAVHTLLKQEPFLAYVYETEQFYQVRSGRDLLINIPKNRTFETPYLKKKPGLAQPAFR
Ga0105249_121534921	3300009553	Switchgrass Rhizosphere	MQKKLQTEVAQLLEEVGQLAQQGEREKAYQSSLRATSLAPDEPLAWYLRSRAAASSEEQLMCLSRAYSLDPNFPDVKKELRISVQTLLKQEPFLAYVHETEAFYQVRSGRDLLINIPKNRTFEVPYLKKAPGLATAAYR
Ga0105252_103026851	3300009678	Soil	MPEKLPVEVSQLLEDAEQSIQQDKREIAYQSSLKATSLAPHEPLAWYLRSQSAPSSEEQLICLSRAYSLDPDFQDAKKKLRAAVQGLLKQEPFLAYVYETEVLYQVRSNLGFLINIPKNRVFEKPYLQKDPGPLQPAYGWLYLSLLALVLGGVGALVLVLRGGLVGQRVRRPDLPVRVWVRAAHQL
Ga0126315_109119572	3300010038	Serpentine Soil	MQKNLQTSVSQLLEEAGQFARQGKREKAYQSSLRATTLAPDEPLAWYARSRNASSTEEQLMCLSRAYSLAPNDPETKRELHSAVHTLLKQEPFLAYVYETEEFYQ
Ga0126312_110058562	3300010041	Serpentine Soil	MQKKLQTNVSHLLEEAGRFAQQGEREKAYQSSLKATSVAPEQPLAWYLRSQNAASIEEQLMCLSRAYSLDPVSPDTKKELRMAVQTLLKQEPFLAYVYETEEF
Ga0126312_111316842	3300010041	Serpentine Soil	MQKKRQSEVSQLLEEAGRLAQQGERHKAYQSSLKATSLAPDEPLAWYSRSQNAPSTEEQLLCLSRAYSLDPSDWDTRKELHAAVHTLVQQEPFLAYVYETEEFYQVRSGRDLLINIPKNRTFETPYLKKKPGLAQPAFRWLALSLLALFLGGV
Ga0126314_113135751	3300010042	Serpentine Soil	MQKEFQTKVPELLKQAEQAAQRGEREKAYQFGLQATSLSPEEPLAWYLRSRVAPSPEEQLMCLSRAYSLDPAFPDGKEELRVAVWALLKQEPFLAYVHETEALYQVRSGRDMLINIPKNRVYEKPYLQRRPGIASPAFRWLSLSFL
Ga0126311_114361661	3300010045	Serpentine Soil	MEKKLQNEVSPLLDEASQFAQQGKREQAYQSSLKATTAAPNEPLAWYLRARNASSTEEQLMCLSRAYSLAPNFPDIKKELRLSVHTLLKQEPFLAYVYETEEFYQVRSGRELLVNVPK
Ga0126382_120300682	3300010047	Tropical Forest Soil	MQKKLPTEAAQLLEEAGMFTQQGEREKAYRSSLRATSIAPDEPLAWYLRSKTALSTEEQLMCLSRAYSLDPNYSDTKKELRTAVQTLLRQEPFLAYVYE
Ga0126306_108800431	3300010166	Serpentine Soil	MQENPPIEVSQLLEHAEQSVQQGKREMAYESSLKATNLAPQEPLAWYLRSQSAASREEQLICLSRAYSLDPTFPDAKRELRAAVQGLLKQEPFLAYVHETEVLYQVRSNLGFLINIPKNRVFEKPYLQKDP
Ga0126306_113459822	3300010166	Serpentine Soil	MQKMLQTEISQLLGEAGQLALQGEREKAYQMSLKATSIAPNEPRGWYLRSQTSASSEEQLMCLSRAYSLDTKFSDAKEDLRIAVQGLLKQEPFLAYVHETEEFYQVR
Ga0134128_114191032	3300010373	Terrestrial Soil	MQKKLQTEVAQLLEEVGQLAQQGEREKAYQSSLRATSLAPDEPLAWYLRSRAAASSEEQLMCLSRAYSLDPNFPDVKKELRISVQTLLKQEPFLAYVHETEAFYQVRSGRDLLINIPKNRTFEVPYLKKAPGLATA
Ga0134124_106643681	3300010397	Terrestrial Soil	MQKKLQTEVAQLLEEVGQLAQQGEREKAYQSSLRATSLAPDEPLAWYLRSRAAASSEEQLMCLSRAYSLDPNFPEVKKELRIAVQTLLKQEPFLAYVHETEAFYQVRSGRDLLINIPKNR
Ga0105246_109358601	3300011119	Miscanthus Rhizosphere	MQKELQIEVSHLLEEAGQFARQGKREKAYQSSLKATGLAPDEPRAWYARSQSAPSTEEQLMCLSRAYSLDPNYLDTQKELRAAVHTLLKQEPFLAYVHETEAFYQVRSGRDLLINIPKNRTFETPYLQRAPGLARPAFRWLSLSLLALLLGGVGAVVL
Ga0137437_11349061	3300011442	Soil	MSEKLSVEVSQLLEDAERSIQQGKREIAHQSSLKATSLAPQEPLAWYLRSQSAPSSEEQLICLSRAYSLDPDFQDAKIELRAAVQGLLKQEPFLAYVYETEVLYQVRSNLGFLINIPKNRVFEKPFLQKDPGPLQS
Ga0137437_11764202	3300011442	Soil	MQEMPSVELSRLLEDAEQSVQQGQRELAYQSSLKATSLAPHEPLAWYLRSQSAPSSEEQLICLSRAYSLNPAFLDAKKELRAAVQGLLKQEPFLAYVHETEELYQVRSSLGFLINIPKNRVFEKPYLQKDPGPLKPIFGWLGVSLLALI
Ga0137353_10527512	3300012157	Soil	MSVQLSDEVSQLLEDAEKSVQQGQRETAYQASLKATGLAPQEPRAWYLRSQSAASSEEQLICLSRAYSLDPSFPDAKRELRAAVQGLLKQEPFLAYVHETEVLYQVRSNLGFLINIPKNRVFEKPYLQKDPGPLRPAYSWLYLSLL
Ga0137338_11290271	3300012174	Soil	MPAQLSVEVSQLLEDAEKSIQQGQRETAHQASLKATSLAPQAPLAWYLRSRSAPSSEEQLICLSRAYSLDPSFPDAKRELRAAVQGLLKQEPFLAYVHETEVLYQVRSNLGFLVNIPKNRVFEKPYLQKEPGPLRPIFGWLYLSLFGLMLGGVGALVLAPITAF
Ga0137374_105356851	3300012204	Vadose Zone Soil	MQKKLQPEVSQLLEEVGHFAQQGEREKAYQSSLKATRIAPDEPRAWYLRSQAASSPEEQLMCLSRAYSLDTAYPDAKKELRTAVQALLKQEPFLAYVHETEEFYQVRSGLDLLINIPKNRTFETPYLQKAPGL
Ga0137386_110363361	3300012351	Vadose Zone Soil	MQEKLSVEISQLLEDAQKSIQQEQRGSAYQSSLKATSLAPNEPLAWYLRSQSAPSFEEQLICLSRAYSLDPAFADAKKELRIAVQGLLKQEPFLAYVHETEVLYQVRSSLGFLINIPKNR
Ga0137367_106228962	3300012353	Vadose Zone Soil	MQKILQTEVSQLLEEAAQFAQQGKREKAYQSSLKATSVAPNEPLAWYLRSQTALSGEEQLMCLSRAYSLNPEFPDAKKELRAAVQALLKQEPFLAYVYETEEFYQVRSGRDMLVNIPKNRSFEQPYLQKAPGLARSAFRWLSLSLLALFLGGVGA
Ga0137368_101938921	3300012358	Vadose Zone Soil	MQKMLQTEVSQLLEEVGQLAQQGEREKAYQSSLRATSIAPDESLAWYLRSQTAPSPEEQLMCLSRAYSLDTTFPDAKKELRTAVQTLLKQEPFLAYVHETEEFYQVRSGRDLLVNIPKNRAFDTPYLQKAPGLAKPAFRWL
Ga0137375_110839951	3300012360	Vadose Zone Soil	MEKKPRGEFSQLLEEAGKFAQQGKREKAYQSSLKATHVAPNEPLAWYLRSQTAASPEEQLLCLSRAYSLDSKHLDTKKELRVAVQALLKQEPFLAYVHETEEFYQVRSGRDLLINIPKNRTFETPYLQKAPGLTKPAFRWLSLALLTLFLGGVGAVVCAPIAAFQ
Ga0137375_114445141	3300012360	Vadose Zone Soil	MKQILQTEISQLLEEVGQLAQQGEREKAYQSSLKATAVAPNAALAWYLRAQNSLSTEERLMCLSRAYSLDPNYPETKEDLRTAVQTLLKQESFLAYVYETEEFYQVRSGREMLINIPK
Ga0137360_107010651	3300012361	Vadose Zone Soil	MQEKLPVEVSQLLEDAQQSVHQGNREIAYQSSLQATSLAPNEPLAWYLRSQTAPSSEEQLICLSRAYLLDPTFSDAKKELRTAVQGLLKQEPFLAYVHETEVLYQVRSSLGFLINIPKNRVFEKPYLQKDPGPIEPVFSWLYVSLFALML
Ga0137341_10457921	3300012676	Soil	MSVQLSDEVSQLLEDAEQSVQQGQRETAYQASLKATSLAPQEPRAWYLRSQSAPSSEEQLICLSSAYSLDPSFPDAKRELRAAVQGLLKQEPFLAYVHETEVLYQVRSNLGFLINIPKNRAFEKPYLQKEPGPLKPIFGWLYLSLFGLMVGGVGALVFAPI
Ga0164300_106348112	3300012951	Soil	MQKKLQTEVSQLLEEVGQLAQQGEREKAYQSSLRATSLAPDVPLAWYLRYRAAASSEEQLMCLSRAYSLDPNFPDVKKELRTAVQTLLKQEPFLAYVHETEEFYQV*
Ga0164302_113830091	3300012961	Soil	MQKKLQTEVSQLLEEVGQLAQQGEREKAYQSSLRATSLAPDVPLAWYLRSRAAASSEEQLMCLSRAYSLDPNFPDVKKELRTAVQTLLKQEPFLAYVHETEEFYQVRSGRDLLINIPKNRTFEIPYLKKAPGLARPAFRWLAFSVLALILGGVGA
Ga0163163_133183421	3300014325	Switchgrass Rhizosphere	MQKQPQTEVSHLLEEAGQFARQGKREKAYQSSLKATGLAPDEPRAWYARSQNAQSTEEQLMCLSRAYSLDPNYLDTQKALRAAVHSLLKQEPVLAYVHETEAFYQVRSGRDLLINIPKNRSFETPYLQREPGLARPA
Ga0134085_105908181	3300015359	Grasslands Soil	MQKELQTKVSQLLEAAEKASQHGEREKAYQVSLEATGLAPNEPMAWYLRSQVAASREEKLMCLSRAYSLYTTRPEAKKELRTAIQDLLKQEPFLAYVYETQE
Ga0184610_10219512	3300017997	Groundwater Sediment	MQKKFQSEVSQLLEEAGQFAQQGEREKAYQSSLRATSVAPEQPLAWYLRSQNAASVEEQLMCLSRAYSLDPALPDTRKELRVAVQALLKQEPFLAYVHETEELYQVRSGRDLLINIPK
Ga0184626_104495272	3300018053	Groundwater Sediment	MQNELQSKVSRLLEDAEQSVQQGKREKAYRSSLKATSLAPNEPLAWYLRSQTSPSAEEQLMCLSRAYSLDPTFSDAKKDLRAAVQGLLKQEPFLAYVHETEAL
Ga0184623_105233291	3300018056	Groundwater Sediment	MQSKLQSQVSQLLIEAEQSAQQGKREKAYRSSLKATSLAPNEPRAWYLRSQTSASAEEQLMCLSRAYSLDPKFSDAKEDLRIAVQGLLKQEPFLAYVHETEELYQVRSGRGLLINIPKNRTFEIPYLKKKPALAQPAFRWLSWSILGLLLGGVGA
Ga0184609_104325232	3300018076	Groundwater Sediment	MQKMLQTEIAQLLEEAGQFAHQGKREKAYQSSLKATSLAPNEPLAWYLRSQTSASAEEQLMCLSRAYSLDPKFSEAKKDLRIAVQGLLKQEPFLAYVYETAEFYQVRSGREMLINI
Ga0193739_10206642	3300020003	Soil	MQNKLQTEVSQLLEEAGNFARQGKREKAYQSSLKATKLAPDEARAWYVRSQNAPSTEEQLMCLSRAYSLAPDHAETNKELRTAVHGLLKQEPFLAYVYETEQFYQVRSGRDLLINIPKDRAFETPYLKKKPGLAQPAFRWLSFALLALFLGGVGAGSRHPRRLKQREFVY
Ga0209108_100817003	3300025165	Soil	MQKKLQTNISQLLEKGGQFAQQGKREKAYQISLRATSVAPDEPLAWYLRSQAAPSPEEQLMCLSRAYSLDPAFTDAKKELRTAVQALLKQEPFLAYVHETEEFYQVRSGLDLLINIPKNRIFETPYLKKAPGLARPAFRWLSL
Ga0209431_106319962	3300025313	Soil	MQKKLPTKVSQLLEEAEQSAKQGERGIAYQSSLEATSLAPDEPLAWYIRSQTALSPEEQLMCLSRAYSLDPAFADAKKELRTAVQGLLAQEPFLAYVHETEVLYQVRSG
Ga0209431_109477761	3300025313	Soil	MQEELPTNVSRLLEAAERSVQEGKREEAYRASLKATNLAPQEPLAWYSRAQTAASPEEQLMCLSRAYSLDPAFPDAKKELRAAVQALLKQEPFLAYVHETEEFYQVRSGLDLLIN
Ga0210114_10628911	3300025795	Natural And Restored Wetlands	MQNNLQTEVSQLLEGVENFARQGRRQKAYELSLRATSLAPNEPRAWYLRSLNAPSREEQLMCLSHAYSLDPNHLEAKKDLRAAVHTLLKQEPFLAYVYETEQFYQVRSGRDLLINIPK
Ga0207712_115986822	3300025961	Switchgrass Rhizosphere	MQKKLQTEVAQLLEEVGQLAQQGEREKAYQSSLRATSLAPDEPLAWYLRSRAAASSEEQLMCLSRAYSLDPNFPDVKKELRISVQTLLKQEPFLAYVHETEAFYQVRSGRDLLINIPKNRTFEVPYLKKAPGLATAAYRWLAFSVLALILGGVGA
Ga0207712_121453441	3300025961	Switchgrass Rhizosphere	MPKKFQSDVSQLLEEVEQLTRQGELDKAHQTSLQATSLAPDDPRAWYLRSQAARSTEEKLMCLSRAVSLDPNYPELQSKLRSSIQALLKQEPFLAYVHENPEFYQVRSGRDLLINVPKNRMFE
Ga0207676_113905821	3300026095	Switchgrass Rhizosphere	MPKNFQSDVSQLLEEVEQLTRQGELEKAHQTSLQATSLAPDDPRAWYLRSQAARSTEEKLMCLSRAVSLDPNYPELQSKLRSSIQALLKQEPFLAYVHENPEFYQVRSGRDLLINVPKNRMFETPYLKKKPGLTQPAFRLLNYSVVALLLG
Ga0207674_115382961	3300026116	Corn Rhizosphere	MQKRLQTEVSQLLEEVGQLAQQGEREKAYQSSLRATSMAPDEPLAWYLRSQNAASVEEQVMCLSRAYSLDTAYPDAKKELRIAVQALLKQEPFLAFVHETQ
Ga0209592_11659871	3300027731	Freshwater Sediment	MKGVWEFSGHLMQKELQTDISRLLDEARQFARQGKREKAYQSSLKATSVAPDVPLAWYLRAQTAPSPEEQLMCLSRAYSLNPAFPEAKNELRTAVQALLKQEPFLAYVHETEEFYQVRSGLDLLINIPKNRTFEKPYLQRAPGPAKPAFRWLSISLLALFLGGVGAVLLAPFTA
Ga0209593_102725632	3300027743	Freshwater Sediment	MQNEFLSDVSRLLEEAKQSAQRGEREKAYQTSLRATTVAPQEPLAWYVRSQNAPSTEEQLMCLSRAYSLDPKFPDTKIQLRTAVQNLLKQEPFLAYVHETEEFYQVRSGRELLINIPKNRTFEIPYLQKKPGLAQPAF
Ga0209814_100317822	3300027873	Populus Rhizosphere	MQKRLQTEVSQLLEEVGQLAQQGEREKAYQSSLKATSMAPDEPLAWYLRSQAAPSPEERLMCLSRAYSLDTAFPDAKKESRTAVQTLLKQEPFLAYVHETEEFYQVRSGRDLLVNIPKNRAFEKPYLQKTPEFSRPAFRWLSISLLALFLGGVGASCWLPLRRFRRCDYKRPPPPAEIECGCGLSSFFL
Ga0209481_102753811	3300027880	Populus Rhizosphere	MQKPLKTEVSQLLEEAGTFAGQGQREKAYQASLRATTIAPDEPLAWYLRSQNAPSPEEQLMCLSHAYSLAPDHPETRKELHSAVHGLLKQEPFLAYVYETEQFYQVRSGRDLLINIPKNRVFETPYLKKKPGIAQPAFRWLSLALLALFLGGVGAVLFAPVAAFQ
Ga0209382_106722982	3300027909	Populus Rhizosphere	MQRKLQANVSQLLEEAGRLAQQGERHKAYQSSLKATSLAPDEPLAWYSRSQNALSTEEQLLCLSRAYSLDPSDWDTRKELHAAVHTLVQQEPFLAYVYETEEFYQVRSGRDLLINIPKNRTFETPYLKKKPGLAQ
Ga0209382_107845532	3300027909	Populus Rhizosphere	MQPKIKPEVTPLLEEVQRLVQRGEREKAYQSSLRATSLAPDEPLAWYLRAQAAPSTEEQLMCLSRAYSLDSTAADTKKELRTAIHGLLKQEPFLAYVHETEELYQVRSGRDLLINIPKN
Ga0307410_113725521	3300031852	Rhizosphere	MEEKLQSEVSQLLEEAGIFARQGKREQAYQSSLRATMIAPKEPLGWYLRSQNAPSREEQLMCLSHAYTLAPDHQETRNDLHTAVHHLLKQEPFLAYVYETEKFYQVRSGRDLLINVPKNRSYEIPYLKKKPGLAQP
Ga0307406_113524151	3300031901	Rhizosphere	MQKQLQTEVSQLLEEAGQFARQGKREKAYQASLRATTIAPDEPRAWYLRSQNAPSREEQLMCLSHAYSLAPDQPETRKELHAAVHGLIKQEPFLAYVHETEQFYQVR
Ga0307407_106478271	3300031903	Rhizosphere	MDNNLQTEVSQLLEEAGVLATQGKREKAYQSSLKATALAPNEHRAWYLRSQTAPSREEQLMCLSHAYSLAPEHTETKKELRAAVHALVKQEPFLAYVYETEKYYQVRSGRDLLLNVPKDRTFETPYLKKPPGLAKPAFRWLSLAVFALILGGVGA
Ga0307416_1033672591	3300032002	Rhizosphere	MDNNLQTEVSQLLEEAGVLATQGKREKAYQSSLKATALAPNEHRAWYLRSQNAPSREEQLMCLSHAYSLAPEHTETKKELRAAVHALVKQEPFLAYVYETEKYYQVRSGRDLLINVPKDRTFETPYLKKPPGLAKPAFRWLSLAVFALILGGVGA
Ga0307415_1014402181	3300032126	Rhizosphere	MQKMLQTEIAQLLEEAEQLARQGKREKAYQMSLKATSIAPNEPRGWYLRSQTSASSEEQLMCLSRTYSLDTKFSDAKEDLRIAVQGLLKQEPFLAYVHETDELYQVRSGREMLINIPKNRTVEIPYLKKKPGLAQPAFRWLS
Ga0370490_0163255_1_390	3300034128	Untreated Peat Soil	METKLQAEVSQLLEEAGTFAQQGKREKAYRSSLRATTLAPDEPLAWYIRSRNAPSREEQLMCLSHAYSLAPDDSETKKELRSAVHTLLKQEPFLAYVYETEQFYQVRSGRDLLINIPKDRTFETPYLKRK
Ga0373950_0077972_2_391	3300034818	Rhizosphere Soil	MQKMLQNEVSQLLEEVGQLAQQGEREKAYQSSLRATSLAPDEPLAWYLRSQSAPSTEEQLMCLSRAYSLDPKAPDAKKELRTAVHRLLKQEPFLAYVHETEEFYQVRSGRDLLINVPKNRTFETPYLQKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074724

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences