Metagenome / Metatranscriptome Family F074806

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074806
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	85 residues
Representative Sequence	MLTTMIAIWVVVTVILVALSIHRSIFVMREEDTIFLSKGERSTAEEYTTIFQRLKRLEFVLKIFSFSSGGLLVLIAALWLYQRLYG
Number of Associated Samples	72
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.47 %
% of genes near scaffold ends (potentially truncated)	29.41 %
% of genes from short scaffolds (< 2000 bps)	80.67 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.101 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (23.529 % of family members)
Environment Ontology (ENVO)	Unclassified (56.303 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.05% β-sheet: 0.00% Coil/Unstructured: 28.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13360	PQQ_2	7.56
PF13442	Cytochrome_CBB3	5.04
PF04945	YHS	4.20
PF04226	Transgly_assoc	2.52
PF11154	DUF2934	2.52
PF00034	Cytochrom_C	1.68
PF13470	PIN_3	0.84
PF00582	Usp	0.84
PF13519	VWA_2	0.84
PF04055	Radical_SAM	0.84
PF12680	SnoaL_2	0.84
PF00571	CBS	0.84
PF10703	MoaF	0.84
PF13689	DUF4154	0.84
PF13298	LigD_N	0.84
PF06983	3-dmu-9_3-mt	0.84
PF13620	CarboxypepD_reg	0.84
PF03544	TonB_C	0.84
PF13429	TPR_15	0.84
PF13090	PP_kinase_C	0.84
PF01842	ACT	0.84
PF00378	ECH_1	0.84
PF06348	DUF1059	0.84
PF00109	ketoacyl-synt	0.84
PF06897	DUF1269	0.84
PF13883	Pyrid_oxidase_2	0.84
PF14534	DUF4440	0.84
PF13632	Glyco_trans_2_3	0.84
PF00487	FA_desaturase	0.84
PF02702	KdpD	0.84
PF04545	Sigma70_r4	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	2.52
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.84
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.84
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.84
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.84
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.84
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.10 %
Unclassified	root	N/A	47.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.10 %
Unclassified	root	N/A	47.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.10 %
Unclassified	root	N/A	47.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.36 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.36 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.36 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.68 %
Hydrogenophaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga	0.84 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.68 %
unclassified Hydrogenophaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga	0.84 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.68 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.84 %
Hydrogenophaga sp. T4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004618\|Ga0068963_1397255	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	711	Open in IMG/M
3300004619\|Ga0068953_1355464	Not Available	528	Open in IMG/M
3300004620\|Ga0068957_1409487	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	576	Open in IMG/M
3300005542\|Ga0070732_10226051	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300006059\|Ga0075017_100183375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1506	Open in IMG/M
3300006638\|Ga0075522_10466255	Not Available	589	Open in IMG/M
3300009643\|Ga0116110_1206024	Not Available	637	Open in IMG/M
3300010048\|Ga0126373_12148082	Not Available	620	Open in IMG/M
3300010358\|Ga0126370_10082808	Not Available	2163	Open in IMG/M
3300010361\|Ga0126378_12158316	Not Available	635	Open in IMG/M
3300010366\|Ga0126379_12749246	Not Available	588	Open in IMG/M
3300010376\|Ga0126381_100160338	All Organisms → cellular organisms → Bacteria → Acidobacteria	2965	Open in IMG/M
3300010379\|Ga0136449_101269019	Not Available	1152	Open in IMG/M
3300010379\|Ga0136449_101545844	Not Available	1012	Open in IMG/M
3300010379\|Ga0136449_103375305	Not Available	612	Open in IMG/M
3300011058\|Ga0138541_1032626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300011086\|Ga0138564_1117054	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300011090\|Ga0138579_1218630	Not Available	879	Open in IMG/M
3300011090\|Ga0138579_1324640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300011110\|Ga0138578_1092490	Not Available	596	Open in IMG/M
3300012931\|Ga0153915_10093653	All Organisms → cellular organisms → Bacteria → Proteobacteria	3174	Open in IMG/M
3300012931\|Ga0153915_10286473	Not Available	1835	Open in IMG/M
3300012931\|Ga0153915_10849304	Not Available	1060	Open in IMG/M
3300012931\|Ga0153915_11659737	Not Available	748	Open in IMG/M
3300012931\|Ga0153915_11754059	Not Available	726	Open in IMG/M
3300012964\|Ga0153916_10544595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300012971\|Ga0126369_13356799	Not Available	524	Open in IMG/M
3300014156\|Ga0181518_10206758	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300014158\|Ga0181521_10130816	All Organisms → cellular organisms → Bacteria → Acidobacteria	1477	Open in IMG/M
3300014159\|Ga0181530_10048059	All Organisms → cellular organisms → Bacteria	2820	Open in IMG/M
3300014162\|Ga0181538_10228473	Not Available	1033	Open in IMG/M
3300014164\|Ga0181532_10432147	Not Available	728	Open in IMG/M
3300014169\|Ga0181531_10446346	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300014200\|Ga0181526_10893992	Not Available	559	Open in IMG/M
3300014489\|Ga0182018_10487513	Not Available	653	Open in IMG/M
3300014495\|Ga0182015_10561813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300014495\|Ga0182015_10609604	Not Available	692	Open in IMG/M
3300014501\|Ga0182024_10081163	All Organisms → cellular organisms → Bacteria → Acidobacteria	4833	Open in IMG/M
3300014501\|Ga0182024_10165759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3077	Open in IMG/M
3300014501\|Ga0182024_10414361	Not Available	1738	Open in IMG/M
3300014501\|Ga0182024_10859421	Not Available	1098	Open in IMG/M
3300014501\|Ga0182024_10896525	Not Available	1069	Open in IMG/M
3300014501\|Ga0182024_11572323	Not Available	747	Open in IMG/M
3300014501\|Ga0182024_11857714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300016702\|Ga0181511_1426018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300016705\|Ga0181507_1363608	Not Available	694	Open in IMG/M
3300016705\|Ga0181507_1386404	Not Available	667	Open in IMG/M
3300016728\|Ga0181500_1067688	Not Available	577	Open in IMG/M
3300016750\|Ga0181505_10284453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300016750\|Ga0181505_10386779	Not Available	877	Open in IMG/M
3300016750\|Ga0181505_10655660	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300017822\|Ga0187802_10032165	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300017823\|Ga0187818_10045896	All Organisms → cellular organisms → Bacteria	1876	Open in IMG/M
3300017924\|Ga0187820_1033103	Not Available	1347	Open in IMG/M
3300017930\|Ga0187825_10395071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300017943\|Ga0187819_10594276	Not Available	627	Open in IMG/M
3300017946\|Ga0187879_10393865	Not Available	767	Open in IMG/M
3300017955\|Ga0187817_10769294	Not Available	615	Open in IMG/M
3300017959\|Ga0187779_10000149	All Organisms → cellular organisms → Bacteria	52557	Open in IMG/M
3300017959\|Ga0187779_10004978	All Organisms → cellular organisms → Bacteria → Acidobacteria	7863	Open in IMG/M
3300017959\|Ga0187779_11165293	Not Available	541	Open in IMG/M
3300017961\|Ga0187778_10003868	All Organisms → cellular organisms → Bacteria	9990	Open in IMG/M
3300017961\|Ga0187778_10127839	Not Available	1593	Open in IMG/M
3300017961\|Ga0187778_10153682	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300017961\|Ga0187778_10943305	Not Available	595	Open in IMG/M
3300017970\|Ga0187783_10002128	All Organisms → cellular organisms → Bacteria	14738	Open in IMG/M
3300017970\|Ga0187783_10046490	All Organisms → cellular organisms → Bacteria	3208	Open in IMG/M
3300017970\|Ga0187783_10171468	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300017970\|Ga0187783_10172953	All Organisms → cellular organisms → Bacteria → Acidobacteria	1589	Open in IMG/M
3300017972\|Ga0187781_10045747	Not Available	3012	Open in IMG/M
3300017972\|Ga0187781_10379585	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300017972\|Ga0187781_10411400	Not Available	966	Open in IMG/M
3300017972\|Ga0187781_10702809	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300017973\|Ga0187780_10010754	All Organisms → cellular organisms → Bacteria	6747	Open in IMG/M
3300017973\|Ga0187780_10022343	All Organisms → cellular organisms → Bacteria	4529	Open in IMG/M
3300017973\|Ga0187780_10029633	All Organisms → cellular organisms → Bacteria → Proteobacteria	3866	Open in IMG/M
3300017973\|Ga0187780_10199361	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300017973\|Ga0187780_10784775	Not Available	689	Open in IMG/M
3300018006\|Ga0187804_10204376	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300018035\|Ga0187875_10386567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300018040\|Ga0187862_10527419	Not Available	707	Open in IMG/M
3300018047\|Ga0187859_10818131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300018058\|Ga0187766_10013877	All Organisms → cellular organisms → Bacteria	4597	Open in IMG/M
3300018060\|Ga0187765_10005841	All Organisms → cellular organisms → Bacteria → Acidobacteria	5270	Open in IMG/M
3300018062\|Ga0187784_10373967	All Organisms → cellular organisms → Bacteria → Acidobacteria	1153	Open in IMG/M
3300018086\|Ga0187769_10000071	All Organisms → cellular organisms → Bacteria	48975	Open in IMG/M
3300018086\|Ga0187769_10249887	All Organisms → cellular organisms → Bacteria → Acidobacteria	1319	Open in IMG/M
3300018088\|Ga0187771_10062545	All Organisms → cellular organisms → Bacteria → Proteobacteria	2925	Open in IMG/M
3300018088\|Ga0187771_10219354	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300018090\|Ga0187770_10555841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	910	Open in IMG/M
3300019256\|Ga0181508_1302923	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300019256\|Ga0181508_1463759	Not Available	601	Open in IMG/M
3300019256\|Ga0181508_1633152	Not Available	698	Open in IMG/M
3300019275\|Ga0187798_1158688	Not Available	529	Open in IMG/M
3300019278\|Ga0187800_1231443	Not Available	697	Open in IMG/M
3300019278\|Ga0187800_1355576	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300019278\|Ga0187800_1359105	Not Available	517	Open in IMG/M
3300019278\|Ga0187800_1638191	Not Available	662	Open in IMG/M
3300019284\|Ga0187797_1122480	Not Available	627	Open in IMG/M
3300019284\|Ga0187797_1633825	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300021560\|Ga0126371_12797374	Not Available	592	Open in IMG/M
3300021860\|Ga0213851_1362068	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300021861\|Ga0213853_11509483	Not Available	557	Open in IMG/M
3300021861\|Ga0213853_11597198	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300027826\|Ga0209060_10554314	Not Available	521	Open in IMG/M
3300031241\|Ga0265325_10171731	Not Available	1014	Open in IMG/M
3300031525\|Ga0302326_12273206	Not Available	689	Open in IMG/M
3300032160\|Ga0311301_10915498	Not Available	1178	Open in IMG/M
3300032160\|Ga0311301_12697338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300032783\|Ga0335079_10901532	Not Available	908	Open in IMG/M
3300032783\|Ga0335079_10955774	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300032805\|Ga0335078_10029111	All Organisms → cellular organisms → Bacteria → Acidobacteria	8203	Open in IMG/M
3300032805\|Ga0335078_10338614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4	2003	Open in IMG/M
3300032805\|Ga0335078_10374889	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300032828\|Ga0335080_10046581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4786	Open in IMG/M
3300032828\|Ga0335080_10369883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1543	Open in IMG/M
3300032828\|Ga0335080_10766032	Not Available	1000	Open in IMG/M
3300032895\|Ga0335074_10896724	Not Available	805	Open in IMG/M
3300033158\|Ga0335077_10179712	All Organisms → cellular organisms → Bacteria → Acidobacteria	2398	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.39%
Aquatic	Environmental → Aquatic	32.77%
Plants	Host-Associated → Plants	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.55%
Freshwater	Environmental → Aquatic → Freshwater	31.93%
Sediment	Environmental → Aquatic → Sediment	0.84%
Peat	Environmental → Terrestrial → Peat	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	46.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	29.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	37.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.40%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	23.53%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.88%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	5.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	5.88%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	5.04%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	2.52%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.84%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004618	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 55 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004619	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 45 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004620	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011058	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 22 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011086	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011110	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068963_13972552	3300004618	Peatlands Soil	MLMNLVIAWSVVTVILVALSIHRSILVMREEDTIFLSDAERTEASQYAEVIQRLKRLEVVLKSFSFASGGLMLVIAVVWVYQGLYK*
Ga0068953_13554642	3300004619	Peatlands Soil	MLTTMIAIWVVVTVILIALSIHRSIFVMREQDTIFLSKGERSTSNEYADIFRRLKRLELVLKIFSFTAGGLMLLIAALWLYQRLYG*
Ga0068957_14094871	3300004620	Peatlands Soil	MLMNLVIAWSVVTVILVALSIHRSILVMREEDTIFLSEAERSEASQYATVLQRLRRLEVVLKSFSFASGGLMLLIAAVWVY
Ga0070732_102260512	3300005542	Surface Soil	MLPTTITVWAVVAVVLIALSIHRSIFVTREQDTIFVSEGERSTKNEYARVVTRLKRLEFVLKIFSYASGALTILVAAMWVYERLYG*
Ga0075017_1001833753	3300006059	Watersheds	TVILVALSIHRSIFVMREEDTIFLTKGERSTAEEYATIFQRVKRLEFILKIFSFSSGALVLLIAVLWLYQRLYG*
Ga0075522_104662551	3300006638	Arctic Peat Soil	MIAIWVVVTVILVALSIHRSIFVMREQDTIFLSKGERSTSDEYSKIFQQLKRLEIVLKIFSFSSGGLALLVAVLWLYQRLSHGIS*
Ga0116110_12060242	3300009643	Peatland	MLTTMIAIWVVITVILVALSIHRSIFVMREEDTIFLTKGERSAAEEYATIFQRLKRLEFVLKMVSFSSGALVLLIAVLW
Ga0126373_121480821	3300010048	Tropical Forest Soil	MLTTMIGIWTVVTVILIALSIHRSIFVMREEDTIFLSRGERSTKAEYETIFRKLRRLEGVLKVVSFSSGALMFLIAAVWVYQRLYG*
Ga0126370_100828082	3300010358	Tropical Forest Soil	MLTTMIGIWTVVTVILIALSIHRSIFVMREEDTIFLSRGERSTKAEYETIFRKLRRLEGVLKVVSFSSGALMFLIAVVWVYQRLYG*
Ga0126378_121583162	3300010361	Tropical Forest Soil	MLPTIIGIWAVVTVILIALSVHRSIFVMREEDTIFVSAGEHGKNSEYEMTIQRLKRLESVLKTFSFASGTLALLIAVLWIYERLYG*
Ga0126379_127492462	3300010366	Tropical Forest Soil	MLTTMIGIWTVVTVILIALSIHRSIFVMREEDTIFLSRGERSTKAEYETIFRKLKRLEGVLKVVSFSSGALMFLIAAVWVYQRLYG*
Ga0126381_1001603384	3300010376	Tropical Forest Soil	MLPTMIGFWVVISVILTALSIHRSIFITREEDTIFVSPAERGTKNQYERIVQRLRRLESVLKIFSFASGALALLIAVIWVYQRLYG*
Ga0136449_1012690191	3300010379	Peatlands Soil	MLTTMIAIWVVVTVILIALSIHRSIFVMREQDTIFLSKGERSTSDEYSKIFQQLKRLEFVLKIFSFSSGGLALLIAVLWLYQRLSHGIS*
Ga0136449_1015458441	3300010379	Peatlands Soil	MLTTMIAIWVVVTVILVALSIHRSIFVMHEEDTIFLSKGERSTAEEYTTIFQRLKRLEFVLKIFSFSSGGLLVLIAALWLYQRLYG*
Ga0136449_1033753051	3300010379	Peatlands Soil	MLTTMIAIWVVITVILFALSIHRSIFVMREEDTIFLTKGERSTADEYATIFERLKRLEFILKIFSFSSGGLM
Ga0138541_10326261	3300011058	Peatlands Soil	LMLTTMIAIWVVITVILVALSIHRSIFVMREEDTIFLTKGERSTAEEYATIFQRLKRLEFVLKIFSFSSGALVLLIAVLWLYQRLYG*
Ga0138564_11170542	3300011086	Peatlands Soil	LGRFISNLLRRFDMLMNLVIAWSVVTVILVALSIHRSILVMREEDTIFLSDAERTEASQYAEVIQRLKRLEVVLKSFSFASGGLMLVIAVVWVYQGLYK*
Ga0138579_12186302	3300011090	Peatlands Soil	MLTTMIAIWVVVTVILIALSIHRSIFVMREEDTIFLTKGERSTSEEYSKIFQQLKRLEFVLKIFSFSSGGLALLIAVLWLYQRLSHGIS*
Ga0138579_13246401	3300011090	Peatlands Soil	RLMLTTMIAIWVVITVILVELSIHRSIFVMREEDTIFLTKGERSTAEEYATIFQRLKRLEFVLKIFSFSSGALVLLIAVLWLYQRLYG*
Ga0138578_10924901	3300011110	Peatlands Soil	MLTTMIAIWVVVTVILIALSIHRSIFVMREEDTIFLSKGERSTSDEYSKIFQQLKRLEFVLKIFSFSSGGLALLIAVLWLYQRLSHGIS*
Ga0153915_100936532	3300012931	Freshwater Wetlands	MLPTIIAVWAVVTVILIALSIHRSIFIMREEDTIFVSAGERSTKNEYATTIQRLKRLESVLKVFSFTSGALTLLVAVMWLYERLYR*
Ga0153915_102864732	3300012931	Freshwater Wetlands	MLPTIIAIWAVVTVTLIALSIHRFIFIMREEDTIFVSAGERSTKSEYGTIIQRLKRLESVLKVLSFASGALTLLVAVM*
Ga0153915_108493041	3300012931	Freshwater Wetlands	MLPTIIAIWAVVTVILIALSIHRSIFIMREEDTIFVSAGERSTKSEYETTIQRLKRLESVLKVFSFASGALTLLVAVMWLYERLY
Ga0153915_116597372	3300012931	Freshwater Wetlands	MLPAIIAIWAVVTVILVALSIHRSIFIMREEDTLFLSPGERSTKMDYAATVQRLKRLESVLKVFSFASGALTLLVAAVWVYGRLYH*
Ga0153915_117540591	3300012931	Freshwater Wetlands	MLPTVIAIWAVVTVILIALSIHRSIFVMREEDTIFVAAGERSTKSEYATTIQRLKRLEFVLKVFSFASGALTLLVAAMWLYERLYR*
Ga0153916_105445951	3300012964	Freshwater Wetlands	MLPTIIAIWAVVTVILIALSIHRSIFIMREEDTIFVSAGERSTKSEYATTIQRLKRLESVLKVFSFASGALTLLVAVMWLYERLYR*
Ga0126369_133567991	3300012971	Tropical Forest Soil	MLTTMIGIWTVVTVILIALSIHRSIFVMREEDTIFLSRGERSTKTEYETIFRKLRRLEGVLKVVSFSSGALMFLIAVVWVYQRLYG*
Ga0181518_102067581	3300014156	Bog	MLTTMIAIWVVITVILVALSIHRSIFVMREEDTIFLSKGERSTADEYTTIFQRLKRLEFVLKIFSFSSGGLL
Ga0181521_101308162	3300014158	Bog	MLTTMIAIWVVVTVILVALSIHRSIFVMREEDTIFLSKGERSTAEEYTTIFQRLKRLEFVLKIFSFSSGGLLVLIAALWLYQRLYG*
Ga0181530_100480594	3300014159	Bog	MLTTMIAIWVVITVILVALSIHRSIFVMREEDTIFLTKGERSAAEEYATIFQRLKRLEFVLKMVSFSSGALVLLIAVLWLYQRLYG*
Ga0181538_102284732	3300014162	Bog	MLTTMIAIWVVVTVILVALSIHRSIFVMREEDTIFLSKGERSTAEEYTTIFQRLKQLEFVLKIFSFSSGGLLVLIAALWLYQRLYG*
Ga0181532_104321471	3300014164	Bog	MLTTMIAIWVVITVILVALSIHRSIFVMREEDTIFLSKGERSTAEEYTTIFQRLKRLEFVLKIFSFSSGGLLVLIAALWLYQRLYG*
Ga0181531_104463461	3300014169	Bog	MLTTMIAIWVVVTIILVALSIHRSIFVMREQDTIFLAKGERSTSDEYSKVFQQLKRLEFVLKTFSFSSGGLALLIAVLWLYQRLSHGIS*
Ga0181526_108939921	3300014200	Bog	MLTTMIAIWVVVTVILIALSIHRSIFVMREEDTIFLSKGERSTSDEYSKIFQQLKRLEFVLKIFSFSSGGLALLIALLWLYQ
Ga0182018_104875131	3300014489	Palsa	MWLEVDFPPRARGIHTAMLTTMIAIWVVITVILVALSIHRSIFVMREEDTIFLTKGERSTADGYATIFQRLKRLEFVLKIFSFSSGGLMLLIALLWLYQRLYG*
Ga0182015_105618132	3300014495	Palsa	MLTTMIAIWVVITVILVALSIHRSIFVMREEDTIFLTKGERSTADGYATIFQRLKRLEFVLKIFSFSSGGLMLLIALLWLYQRLYG*
Ga0182015_106096041	3300014495	Palsa	MLTTMIAIWVVVTVILIALSIHRSIFVMREQDIIFVSKGERSTSDEYAKIFKRLKRLEVVLKTFSFSSGGLALLIAALWLYQRLSHGIS*
Ga0182024_100811636	3300014501	Permafrost	MLTTMIAIWVVVTVILVGLSIHRSIFIMREDDTIFLSKGDRSKSNEYANISQQLNRLEFVLKIFPFSSGGLMLLIAALWLYQRFYG*
Ga0182024_101657591	3300014501	Permafrost	MLTTMIAIWVVVTVILVALSIHRSIFVMREQDTIFLSKGERSTSDEYSKIFQQLKRLEFVLKIFSFSSGGLALLIAVLWLYQRLSHGIS*
Ga0182024_104143613	3300014501	Permafrost	MLTTMIAIWVVVTVILVALSIHRSIFVMREEDTIFLSKGERSTSDEYAKIFQRLKRLEFVLKIFSFSSGGLALLIAVLWLYQRLSHGIS*
Ga0182024_108594212	3300014501	Permafrost	MIAIWIVVTVILVALSIHRSIFVMREEDTIFLSKGERSTSDEYAKIFQQLKRLEFVLKIFSFTSGGLAVLIAALWVYQKLYG*
Ga0182024_108965251	3300014501	Permafrost	MLTTMIAAWMVVTVILVALSIRRSIFVMREEDTIFLSKIERSRSGEYATVFQQLKRLEFVLKIFSSSSGGLMLLIAALWVY*
Ga0182024_115723231	3300014501	Permafrost	MVIAVWAVVTVILVALSIHRSIFVMREQDTIFLSKAERSTSDEYAGVFKRLKRLETVLKVFSFSSGFLTLLIAAFWLHQRLYG*
Ga0182024_118577141	3300014501	Permafrost	VILVALSIHRSIFVMREQDTIFLSKGERSTSDEYAKIFQQLKRLEFVLKIFSFSSGGLALLIAVLWLYQRLSHGIS*
Ga0181511_14260181	3300016702	Peatland	MLTTMIAIWVVITVILVALSIHRSIFVMREEDTIFLTKGERSAAEEYATIFQRLKRLEFVLKMVSFSSGALVLLIAVLWPYQRLYG
Ga0181507_13636081	3300016705	Peatland	TMLTTMVAIWVGITVILVALSIHRSIFVMREEDTIFLSEGQRSTSEKYADIFRRLKRLELVLKVFSFSSGALMLVIAALWVHQKLYG
Ga0181507_13864041	3300016705	Peatland	MIAIWVVVTIILVALSIHRSIFVMREQDTIFLSKGERSTSDEYSKVFQQLKRLEFVLKTFSFSSGGLALLIAVLWLYQRLSHGIS
Ga0181500_10676881	3300016728	Peatland	TMLTTMVAIWVGITVILVALSIHRSIFVMREEDTIFLSEGQRSTSEKYADIFRRLKRLELVLKVFSFSSGALMLVIAALWVHQRLYG
Ga0181505_102844531	3300016750	Peatland	TMIAIWVVITVILVALSIHRSIFVMREEDTIFLTKGERSTAEEYATIFQRLKRLEFVLKIFSFSSGALALLIAVLWLYQRLYG
Ga0181505_103867792	3300016750	Peatland	MLTTMMAIWIVVTVTLVALSIHRSIFVMREQDTIFLSKGERSTSDEYSKVFQQLKRLEFVLKTFSFSSGGLALLIAVLWLYQRLSHGIS
Ga0181505_106556601	3300016750	Peatland	MLTTMIAIWVVVTVILVALSIHRSIFVMREEDTIFLSKGERSTSDEYGRIFQRLKRLEFVLKIFSFSSGGLMLLIAVLWVYQRLYS
Ga0187802_100321652	3300017822	Freshwater Sediment	MLPILVAIWAVVTVILIALSIHRSIFVTREEDTIFVSEGDRSTKDEYATIMKRLKRLETVLKIFSFASGALTLLVAAVWLYEKLYH
Ga0187818_100458962	3300017823	Freshwater Sediment	MLPTIVAIWAVVTVILIALSIHRSIFILREEDTIFVSAGERSAKSEYAETIQRLKRLESVLKIFSFASGALTLLVAGMWLYERLYR
Ga0187820_10331032	3300017924	Freshwater Sediment	MLPILVAIWAVVTVILIALSIHRSIFVTREEDTIFVSEGDRSTKDEYATIMKRLKRLETVLKIFSFASGALTLLVAAVWLYE
Ga0187825_103950712	3300017930	Freshwater Sediment	MLTTMIAIWVVVTVILVALSIHRSIFVMREEDTIFLSKGERSTSDEYSKIFQELKRLEFVLKTFSFSSGGLA
Ga0187819_105942761	3300017943	Freshwater Sediment	TMIVIWVVVTVILVALSIHRSIFIMREEDTIFLSRGERSTADEYATIFQRLKRLEFVLKIFSFSSGALMLLIAALWLYQRLYG
Ga0187879_103938652	3300017946	Peatland	MLTTMIAIWVVITVILVALSIHRSIFVMREEDTIFLTKGERSAAEEYATIFQRLKRLEFVLKMVSFSSGALVLLIAVLWLYQRLYG
Ga0187817_107692941	3300017955	Freshwater Sediment	MLTTMIAIWVVVTVILVALSIHRSIFVMREEDTIFLSKGERLTADEYATIFQRLKRLEFVLKIFSFSSGG
Ga0187779_1000014941	3300017959	Tropical Peatland	MLSIMIAIWAVVTLVLIALSIHRSIFVMREEDTIFVSPAEGATKEHYATTMQRLKRLETVLKIFSFASGILTVLIAALWLYQKLYG
Ga0187779_100049783	3300017959	Tropical Peatland	MLPTTIAIWAVVTIILIALSIHRSIFIMREEDTIFVAEGERSTKNEYATIMQRLKRLEFVLKIFSFASGALTLLMAVMWVYERLYG
Ga0187779_111652931	3300017959	Tropical Peatland	MLSTTIAIWAVVTIILIALSIHRSIFIMREQDTIFVSEGERSTKNEYATIMQRLRRLEFILKILSFASGALTLLMAGMWLYERLYG
Ga0187778_100038682	3300017961	Tropical Peatland	MLPTMVAIWAVVTLVLIALSIHRSIFVMREQDTIFVSPSEAATKEEYATTMQRLKRLETVLKIFSFASGILTVLIAAMWLYQKLYH
Ga0187778_101278391	3300017961	Tropical Peatland	MLPTMVAIWAVVTVILIALSIHRSIFVTREQDTIFASEAERSTKEEYDKVIHQLKRLEVVLKIFSYAAGILTVLVAGLWFYERLYH
Ga0187778_101536821	3300017961	Tropical Peatland	MLSTTIAIWAVVTIILIALSIHRSIFIMREQDTIFVSEGERSTKNEYATIMQRLRRLEFILKIFSFTSGALTLLMAGMWLYERLYG
Ga0187778_109433051	3300017961	Tropical Peatland	SENSMLPTTIAIWAVVTIILIALSIHRSIFIMREQDTIFVSQGERSTKNEYATIMQRLRRLEFILKIFSFASGALTLLMAVMWLYERLYG
Ga0187783_100021282	3300017970	Tropical Peatland	MLPTTIAIWAVVTIVLIALSIHRSIFIMREEDTIFVSEGERSTKNEYATIMQRLKRLEFVLKIFSFASGALTLLMGGMWLYERLYGS
Ga0187783_100464905	3300017970	Tropical Peatland	MLPVTIAIWAVVTIVLIALSIHRSIFIMREEDTIFVSEGERSTKNEYATIMQRLKRLEFVLKIFSFASGALTLLMALMWLYERLYG
Ga0187783_101714683	3300017970	Tropical Peatland	MLPTMIGMWAVVTLILVALSIHRSIFVMREEDIIFVSGAERATKEGYSTIIQRLKRLETVLKVFSFASGALAVLVAAVWLYEKLYS
Ga0187783_101729533	3300017970	Tropical Peatland	MLPTMIGMWAVVTLILIALSIHRSIFVMREEDTIFVSGAERATKEGYSTIIQRLKRLETILKIFSFASGALAVLVAAVWLYEKLYS
Ga0187781_100457474	3300017972	Tropical Peatland	MLPAMIAVWAVVTVILIALSIHRSIFVMREEDIIFVSEAERATKAEYATTMQRLKRLEVVLKVFSFASGAMTLLVAAVWLYEKLYG
Ga0187781_103795852	3300017972	Tropical Peatland	MLPILIAIWAVVTVILIALSIHRSIFVIREEDTIFVSPAEAATKDEYASTMQRLKRLETVLKIFSFASGILTVLIAALWLYEKLYG
Ga0187781_104114001	3300017972	Tropical Peatland	MLPTIVAIWAVVTVFLIALSIHRSIFIMREEDTIFVAEGERSTKAEYATIIQRLKRLEFLLKIVSFASGALTLLIAVIWLYERLYR
Ga0187781_107028092	3300017972	Tropical Peatland	MGPTSPQNRVADRIDDPKGGKSMLPVTIAIWAVVTIVLIALSIHRSIFIMREEDPIFVSEGERSTKNEYATIMQRLKRLEFVLKIFSFASGALTLLMALMWLYERLYG
Ga0187780_100107545	3300017973	Tropical Peatland	MLSTTIAIWAVVTIILIALSIHRSIFIMREQDTIFVSEGERSTKNEYATIMQRLRRLEFILKIFSFASGALTLLMAGMWLYERLYG
Ga0187780_100223432	3300017973	Tropical Peatland	MLATVIAIWAVVTVILIALSIHRSIFVIREVDTIFASEGERSTKEEYATVVQRLKRLETVLKVFSFAAGALTLLVAATWLYERLYH
Ga0187780_100296333	3300017973	Tropical Peatland	MLPTLVAIWAVVTVILIALSIHRSIFVTREQDTIFASAGERATKEEYDKVIQQLRRLETVLKIFSYAAGILTVLVAGLWFYEKLYH
Ga0187780_101993612	3300017973	Tropical Peatland	MLLTMVTVWAVVTVALIALSIHRSIFIMREQDTLFVSEAERGTKAEYATTVERLRRLEGVLKIFSFTAGILSVIVAALWVYGKLYH
Ga0187780_107847751	3300017973	Tropical Peatland	MLLTLIAIWTVVTLILIALSIHRSIFVMREQDTLFVSPAERATTSEYATIVQRLKRLETVLKIFSFASGALTLLVAATWLYLKLYR
Ga0187804_102043761	3300018006	Freshwater Sediment	PMLPTIVAIWAVVTVILIALSIHRSIFILREEDTIFVSAGERSAKSEYAETIQRLKRLESVLKIFSFASGALTLLVAGMWLYERLYR
Ga0187875_103865672	3300018035	Peatland	MLTTMIAIWVVVTVILVALSIHRSIFVMREEDTIFLSKGERSTAEEYTTIFQRLKRLEFVLKIFSFSSGGLLVLIAALWLYQRLYG
Ga0187862_105274191	3300018040	Peatland	MLTTMIAIWVVVTVILVALSIHRSIFVMREEDTIFLTKGERSAAEEYATIFQRLKRLEFVLKMVSFSSGALVLLIAVLWLYQRLYG
Ga0187859_108181311	3300018047	Peatland	MLTTMIAIWVVLTVILVALSIHRSIFVMREEDTIFLTKGERSTAEEYATIFQRLKRLEFVLKIFSFSSGALVLLIAVLWLYQRLYG
Ga0187766_100138772	3300018058	Tropical Peatland	MLSTTIAIWAVVTIILIALSIHRSIFIMREQDTIFVSEGERSTKNEYATIMQRLRRLEFILKIFSFASGALTLLMAGVWLYERLYG
Ga0187765_100058413	3300018060	Tropical Peatland	MLPTTIAIWAVVTIVLIALSIHRSIFIMREEDTIFVSEGERSTKNEYATIMQRLKRLEFVLKIFSFASGALTLLMGVMWLYERLYG
Ga0187784_103739672	3300018062	Tropical Peatland	MGPTSPQNRVADRIDDPKGGKSMLPVTIAIWAVVTIVLIALSIHRSIFIMREEDTIFVSEGERSTKNEYATIMQRLKRLEFVLKIFSFASGALTLLMALMWLYERLYG
Ga0187769_1000007139	3300018086	Tropical Peatland	MLPTTIAIWAVVTIILIALSIHRSIFIMREQDTIFVSQGERSTKNEYATIMQRLRRLEFILKIFSFASGALTLLMAVMWLYERLYG
Ga0187769_102498872	3300018086	Tropical Peatland	VALIALSIHRSIFIMREQDTLFVSEAERGTKAVYATTVERLRRLEGVLKIFSFAAGILSVVVAALWLYGKLYH
Ga0187771_100625454	3300018088	Tropical Peatland	MLPTLVAIWAVVTVILIALSIHRSIFVTREQDTIFASAGERATKEEYDKVIQQLKRLEVVLKIFSYAAGILTVLVAGLWFYEKLYH
Ga0187771_102193542	3300018088	Tropical Peatland	MLLTMVTVWAVVTVALIALSIHRSIFIMREQDTLFVSEAERGTKAEYATTVERLRRLEGVLKIFSFAAGILSVIVAALWLYGKLYH
Ga0187770_105558412	3300018090	Tropical Peatland	MLPTTVAIWAVVTVVLVALSIHRSIFIMREEDTIFVSEGERSTKNEYATIMQRLRRLEFVLKIFSFASGALTLVMAVMWLYERLYG
Ga0181508_13029231	3300019256	Peatland	SMLTTMIAIWVVVTIILVALSIHRSIFVMREQDTIFLAKGERSTSDEYSKVFQQLKRLEFVLKTFSFSSGGLALLIAVLWLYQRLSHGIS
Ga0181508_14637591	3300019256	Peatland	RTMLTTMVAIWVGITVILVALSIHRSIFVMREEDTIFLSEGQRSTSEKYADIFRRLKRLELVLKVFSFSSGALMLVIAALWVHQRLYG
Ga0181508_16331522	3300019256	Peatland	ILVALSIHRSIFVMREEDTIFLSKTERSTSEEYTKVFEQLKRLEFVLKIFSFASGGLTLLTGALWLYQRLYG
Ga0187798_11586881	3300019275	Peatland	ENSMLPTTIAIWAVVTIILIALSIHRSIFIMREQDTIFVSQGERSTKNEYATIMQRLRRLEFILNIFSFASGALTLLMAVMWLYERLYG
Ga0187800_12314431	3300019278	Peatland	PMLPTIIGIWAVVTVTLIALSVHRSIFVMREEDTLFVSPAEAATKSEYATVVQRMKHLETILKVFSFASGALTLLVAAMWLYEKLYR
Ga0187800_13555761	3300019278	Peatland	RPMLPILIAIWAVVTVILIALSIHRSIFVIREEDTIFVSPAEAATKDEYASTMQRLKRLETVLKIFSFASGILTVLIAALWLYEKLYG
Ga0187800_13591052	3300019278	Peatland	PMLPTMIAIWAVVTVALIALSVHRSIFVMREEDTLFVSPAERGTNADYAAIIRRIKNVETILKIFSFASGGLTLLIAVMWLYEKLYR
Ga0187800_16381911	3300019278	Peatland	RAMLIGLIAIWVVVTVVLVALSIHRSIFVMREEDTIFVSQTEAATKADYATVIERLKRLEKVLKVFTFTSGVLMIVIAVMWLYQRLYG
Ga0187797_11224802	3300019284	Peatland	PMLPILIAIWAVVTVILIALSIHRSIFVIREEDTIFVSPAEAATKDEYASTMQRLKRLETVLKIFSFASGILTVLIAALWLYEKLYG
Ga0187797_16338252	3300019284	Peatland	LPTTIAIWAVVTIILIALSIHRSIFIMREQDTIFVSQGERSTKNEYATIMQRLRRLEFILKIFSFASGALTLLMAVMWLYERLYG
Ga0126371_127973742	3300021560	Tropical Forest Soil	MLTTMIGIWTVVTVILIALSIHRSIFVMREEDTIFLSRGERSTKAEYETIFRKLRRLEGVLKVVSFSSGALMFLIAVVWVYQRLYG
Ga0213851_13620682	3300021860	Watersheds	MLMNLVITWSVVTVILVALSIHRSILVMREEDTIFLSDAERSEADQYATVIQRLKRLETVLKGFSFTSGGLMLLIAAVWVYKGLYS
Ga0213853_115094832	3300021861	Watersheds	MLTTLIAIWVVVTVILVALSIHRSIFVMREEDTIFLSKGERSTSDAYAKIFQQLKRLEFVLKIFSFSSGGLMLLIAALWLYQRLYG
Ga0213853_115971982	3300021861	Watersheds	MLMNLVITWSVVTVILVALSIHRSILVMREEDTIFLSDAERSEADQYATVIQRLKRLETVLKGFSFTSGGLMLLIAAVWV
Ga0209060_105543142	3300027826	Surface Soil	MLTTIIGIWAVFAVILIALSIHRSIFVMREQDIIFISPQERTSSAEYSKVFEQLKRLEVVLKVFS
Ga0265325_101717311	3300031241	Rhizosphere	VALSIHRSIFVMREQDTIFLSKGERSTSDEYSKIFQQLKRLEFVLKIFSFSSGGLALLIAVLWLYQRLSHGIS
Ga0302326_122732061	3300031525	Palsa	MLTTMIAIWAVVTLILVALSIHRSIFVMREEDTIFLSKTERSTSEEYTKVFEQLKRLEFVLKIFSFASGGLTLLTGALWLYQRLYG
Ga0311301_109154982	3300032160	Peatlands Soil	MLTALIAIWVLVTVGLIALSIHRSILVMREEDTLFLSDAERSSADKYGIIVQRLRRLEFLLKILSFSSGGLALLVAAVWVYQHLYG
Ga0311301_126973382	3300032160	Peatlands Soil	MLTTMIAIWVVVTVILVALSIHRSIFVMHEEDTIFLSKGERSTAEEYTTIFQRLKRLEFVLKIFSFSSGGLLVLIAALWLYQRLYG
Ga0335079_109015322	3300032783	Soil	MLLTMATVWAVVTVALIALSIHRSIFIMREEDTLFVSEAERATKAEYATTVERLRRLEGVLKIFSFAAGILSVVVAALWLYGKLYH
Ga0335079_109557742	3300032783	Soil	MLLTMAAVWAVVTVALIALSIHRSIFIMREEDTLFVSEGERGTKAEYATTVERLRRLEGVLKIFSFAAGILSVVVAALWLYGKLYH
Ga0335078_100291111	3300032805	Soil	MLPTVIAIWAVVTVTLIVLSVHRSIFVMREEDTLFVSPAEAGTKSNYAAIVQRMKHLESVLKVFSFASGAFSMLVAAMWLYEKLYR
Ga0335078_103386141	3300032805	Soil	MLPILVAIWAVVTVILIALSIHRSIFVIREEDTIFVSEGDRSTKDEYATIMKRLKRLETVLKIFSFASGALTLLVAAVWLYEKLYH
Ga0335078_103748892	3300032805	Soil	MLPILVAIWAVVTVILIALSIHRSIFVTREEDTIFVSEGDRSTKDEYATIMKRLKRLETVLKIFSFASGSLTLLVAAVWLYEKLYH
Ga0335080_100465813	3300032828	Soil	MLPAMLGVWAMVTVALIALSIHRSIFIMREQDTLFVSKGEHEKKTEYATIVQQLKRLESVLKIFSFASGALTLLVAAVWLYEKLYR
Ga0335080_103698832	3300032828	Soil	MLLTMAAVWAVVTVALIALSIHRSIFIMREEDTLFVSEGERGTKAEYATTVERLRRLEGVLKIFSFAAGILSVVVAALWLYSKLYH
Ga0335080_107660321	3300032828	Soil	MLLTMAAVWAVVTVALIALSIHRSIFIMREEDTLFVSEGERGTKADYATTVERLKRLEGVLKIFSFAAGILSVVVAALWLYGKLYH
Ga0335074_108967241	3300032895	Soil	IALSIHRSIFVIREEDTIFVSRAESSTSGEYARVFQELKRLELLLKIFSFSSGGLMLLTAALWLYQRLYG
Ga0335077_101797123	3300033158	Soil	MLPTLVAIWAVVTVILIALSIHRSIFVTREEDTIFVSEGDRSTKDEYATIMKRLKRLETVLKVFSFASGSLTLLVAAVWLYEKLYH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074806

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences