NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F074816

Metagenome Family F074816

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F074816
Family Type Metagenome
Number of Sequences 119
Average Sequence Length 61 residues
Representative Sequence VSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVDQ
Number of Associated Samples 58
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 39.50 %
% of genes near scaffold ends (potentially truncated) 42.86 %
% of genes from short scaffolds (< 2000 bps) 92.44 %
Associated GOLD sequencing projects 37
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (83.193 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(74.790 % of family members)
Environment Ontology (ENVO) Unclassified
(78.151 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.193 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 72.13%    β-sheet: 0.00%    Coil/Unstructured: 27.87%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF00085Thioredoxin 2.52
PF05136Phage_portal_2 1.68
PF05876GpA_ATPase 0.84
PF05866RusA 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG5511Phage capsid proteinMobilome: prophages, transposons [X] 1.68
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 0.84
COG5525Phage terminase, large subunit GpAMobilome: prophages, transposons [X] 0.84


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A83.19 %
All OrganismsrootAll Organisms16.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10197185Not Available622Open in IMG/M
3300001934|GOS2267_104363All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae1912Open in IMG/M
3300006025|Ga0075474_10004860All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae5461Open in IMG/M
3300006025|Ga0075474_10032650All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp.1823Open in IMG/M
3300006026|Ga0075478_10058373All Organisms → Viruses → Predicted Viral1259Open in IMG/M
3300006026|Ga0075478_10189267Not Available631Open in IMG/M
3300006027|Ga0075462_10105391All Organisms → cellular organisms → Bacteria → Proteobacteria874Open in IMG/M
3300006027|Ga0075462_10163474Not Available677Open in IMG/M
3300006027|Ga0075462_10251556Not Available523Open in IMG/M
3300006637|Ga0075461_10121712Not Available811Open in IMG/M
3300006637|Ga0075461_10159059Not Available689Open in IMG/M
3300006802|Ga0070749_10005291All Organisms → cellular organisms → Bacteria8534Open in IMG/M
3300006802|Ga0070749_10172442All Organisms → cellular organisms → Bacteria → Proteobacteria1249Open in IMG/M
3300006802|Ga0070749_10395930Not Available762Open in IMG/M
3300006802|Ga0070749_10407583Not Available749Open in IMG/M
3300006802|Ga0070749_10494378Not Available667Open in IMG/M
3300006802|Ga0070749_10510423Not Available654Open in IMG/M
3300006802|Ga0070749_10523586Not Available644Open in IMG/M
3300006802|Ga0070749_10523648Not Available644Open in IMG/M
3300006802|Ga0070749_10549942Not Available626Open in IMG/M
3300006802|Ga0070749_10616315Not Available584Open in IMG/M
3300006802|Ga0070749_10725674Not Available530Open in IMG/M
3300006810|Ga0070754_10114453All Organisms → Viruses → Predicted Viral1319Open in IMG/M
3300006810|Ga0070754_10406515Not Available595Open in IMG/M
3300006810|Ga0070754_10422160Not Available581Open in IMG/M
3300006867|Ga0075476_10202914Not Available721Open in IMG/M
3300006867|Ga0075476_10231906Not Available663Open in IMG/M
3300006867|Ga0075476_10339999Not Available520Open in IMG/M
3300006869|Ga0075477_10272585Not Available677Open in IMG/M
3300006870|Ga0075479_10129689Not Available1036Open in IMG/M
3300006874|Ga0075475_10018602All Organisms → Viruses → Predicted Viral3434Open in IMG/M
3300006916|Ga0070750_10025415All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp.2975Open in IMG/M
3300006916|Ga0070750_10267380Not Available738Open in IMG/M
3300006916|Ga0070750_10420225Not Available556Open in IMG/M
3300006916|Ga0070750_10497176Not Available500Open in IMG/M
3300006919|Ga0070746_10069079All Organisms → Viruses → Predicted Viral1806Open in IMG/M
3300006919|Ga0070746_10119582Not Available1302Open in IMG/M
3300006919|Ga0070746_10197511Not Available959Open in IMG/M
3300006919|Ga0070746_10424468Not Available593Open in IMG/M
3300006919|Ga0070746_10482395Not Available547Open in IMG/M
3300007234|Ga0075460_10249847Not Available591Open in IMG/M
3300007234|Ga0075460_10278394Not Available552Open in IMG/M
3300007236|Ga0075463_10189112Not Available663Open in IMG/M
3300007344|Ga0070745_1260872Not Available625Open in IMG/M
3300007345|Ga0070752_1161550Not Available914Open in IMG/M
3300007345|Ga0070752_1166298Not Available897Open in IMG/M
3300007345|Ga0070752_1309749Not Available600Open in IMG/M
3300007346|Ga0070753_1136554Not Available936Open in IMG/M
3300007539|Ga0099849_1235298Not Available678Open in IMG/M
3300007640|Ga0070751_1362743Not Available528Open in IMG/M
3300009124|Ga0118687_10237745Not Available672Open in IMG/M
3300009124|Ga0118687_10257075Not Available649Open in IMG/M
3300009124|Ga0118687_10328806Not Available580Open in IMG/M
3300009124|Ga0118687_10355085Not Available560Open in IMG/M
3300010297|Ga0129345_1183011Not Available748Open in IMG/M
3300010299|Ga0129342_1045918All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp.1726Open in IMG/M
3300010318|Ga0136656_1281358Not Available543Open in IMG/M
3300010389|Ga0136549_10077413All Organisms → Viruses → Predicted Viral1623Open in IMG/M
3300017951|Ga0181577_10472060Not Available788Open in IMG/M
3300017951|Ga0181577_10759233Not Available586Open in IMG/M
3300017951|Ga0181577_10848903Not Available548Open in IMG/M
3300017951|Ga0181577_10875725Not Available537Open in IMG/M
3300017951|Ga0181577_10909601Not Available524Open in IMG/M
3300017967|Ga0181590_10370257Not Available1024Open in IMG/M
3300018421|Ga0181592_10850902Not Available597Open in IMG/M
3300018424|Ga0181591_10452228Not Available946Open in IMG/M
3300019703|Ga0194021_1046155Not Available524Open in IMG/M
3300019708|Ga0194016_1057750Not Available505Open in IMG/M
3300019751|Ga0194029_1020771Not Available1002Open in IMG/M
3300019751|Ga0194029_1090766Not Available531Open in IMG/M
3300021356|Ga0213858_10000122All Organisms → cellular organisms → Bacteria34156Open in IMG/M
3300021379|Ga0213864_10525775Not Available590Open in IMG/M
3300021958|Ga0222718_10393328Not Available694Open in IMG/M
3300021958|Ga0222718_10404420Not Available681Open in IMG/M
3300021964|Ga0222719_10239053Not Available1214Open in IMG/M
3300022050|Ga0196883_1015474Not Available911Open in IMG/M
3300022050|Ga0196883_1046088Not Available528Open in IMG/M
3300022065|Ga0212024_1041855Not Available795Open in IMG/M
3300022065|Ga0212024_1064498Not Available648Open in IMG/M
3300022065|Ga0212024_1065074Not Available645Open in IMG/M
3300022065|Ga0212024_1068416Not Available629Open in IMG/M
3300022068|Ga0212021_1121495Not Available535Open in IMG/M
3300022158|Ga0196897_1047541Not Available509Open in IMG/M
3300022183|Ga0196891_1062124Not Available670Open in IMG/M
3300022183|Ga0196891_1071597Not Available618Open in IMG/M
3300022183|Ga0196891_1074662Not Available603Open in IMG/M
3300022187|Ga0196899_1004230All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes6284Open in IMG/M
3300022187|Ga0196899_1051478Not Available1348Open in IMG/M
3300022187|Ga0196899_1116121Not Available776Open in IMG/M
3300022187|Ga0196899_1122627Not Available747Open in IMG/M
3300022934|Ga0255781_10061300All Organisms → Viruses → Predicted Viral2182Open in IMG/M
3300022934|Ga0255781_10340367Not Available661Open in IMG/M
3300025610|Ga0208149_1036914All Organisms → Viruses → Predicted Viral1314Open in IMG/M
3300025610|Ga0208149_1051877Not Available1059Open in IMG/M
3300025630|Ga0208004_1039384All Organisms → Viruses → Predicted Viral1330Open in IMG/M
3300025671|Ga0208898_1052139Not Available1477Open in IMG/M
3300025751|Ga0208150_1054425Not Available1359Open in IMG/M
3300025759|Ga0208899_1242392Not Available541Open in IMG/M
3300025759|Ga0208899_1266057Not Available500Open in IMG/M
3300025769|Ga0208767_1117674Not Available1026Open in IMG/M
3300025769|Ga0208767_1251696Not Available551Open in IMG/M
3300025771|Ga0208427_1153787Not Available758Open in IMG/M
3300025815|Ga0208785_1024167All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp.1941Open in IMG/M
3300025818|Ga0208542_1097640Not Available849Open in IMG/M
3300025853|Ga0208645_1122405Not Available1035Open in IMG/M
3300025853|Ga0208645_1152678Not Available876Open in IMG/M
3300025889|Ga0208644_1303847Not Available632Open in IMG/M
3300034374|Ga0348335_021451All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp.3091Open in IMG/M
3300034374|Ga0348335_140278Not Available679Open in IMG/M
3300034374|Ga0348335_171892Not Available562Open in IMG/M
3300034375|Ga0348336_074278Not Available1259Open in IMG/M
3300034375|Ga0348336_104108Not Available953Open in IMG/M
3300034375|Ga0348336_155902Not Available671Open in IMG/M
3300034375|Ga0348336_158752Not Available660Open in IMG/M
3300034375|Ga0348336_159502Not Available657Open in IMG/M
3300034375|Ga0348336_163082Not Available644Open in IMG/M
3300034418|Ga0348337_123098Not Available790Open in IMG/M
3300034418|Ga0348337_141418Not Available697Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous74.79%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh8.40%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.36%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment3.36%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.52%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.68%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.68%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.68%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.84%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.84%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001934Estuary microbial communities from Chesapeake Bay, Maryland, USA - MOVE858EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019703Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_7-8_MGEnvironmentalOpen in IMG/M
3300019708Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MGEnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021379Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022934Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaGEnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025815Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1019718513300000117MarineVTTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
GOS2267_10436313300001934MarineMSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0075474_1000486093300006025AqueousQKDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0075474_1003265043300006025AqueousVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0075478_1005837333300006026AqueousKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0075478_1018926733300006026AqueousDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0075462_1010539133300006027AqueousDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0075462_1016347413300006027AqueousVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0075462_1025155623300006027AqueousVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0075461_1012171233300006637AqueousFMSGGSEVSTKQKDIILSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVEQ*
Ga0075461_1015905913300006637AqueousMSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0070749_10005291123300006802AqueousMGTKQRDIILSIIRHGLTLGAGALIASGKIDEAGGNELVAALMAIIGIAWGIKDKVERVDQ*
Ga0070749_1017244213300006802AqueousMSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0070749_1039593033300006802AqueousVNTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGISDKVKRVDQ*
Ga0070749_1040758333300006802AqueousVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVDQ*
Ga0070749_1049437813300006802AqueousIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGISDKVKRVDQ*
Ga0070749_1051042313300006802AqueousGAEVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0070749_1052358623300006802AqueousVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRGDQ*
Ga0070749_1052364813300006802AqueousSAKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0070749_1054994223300006802AqueousVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVDQ*
Ga0070749_1061631513300006802AqueousRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVDQ*
Ga0070749_1072567413300006802AqueousVYFFMSGGSEVSTKQKDIILSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVEQ*
Ga0070754_1011445333300006810AqueousVSTKQKDIVLSIIRHLLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGIYDKVKRAGQ*
Ga0070754_1040651523300006810AqueousSIIRHGLTLGAGALIASGKLDEAGANELVAALMAIIGIAWGINDKVKRVDQ*
Ga0070754_1042216013300006810AqueousVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0075476_1020291413300006867AqueousVSTKQKDIVLSIIRHLLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRAGQ*
Ga0075476_1023190613300006867AqueousSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0075476_1033999923300006867AqueousVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAIIGIAWGINDKVKRVDQ*
Ga0075477_1027258533300006869AqueousRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0075479_1012968913300006870AqueousVEGAEVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVDQ*
Ga0075475_1001860263300006874AqueousTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0070750_1002541513300006916AqueousVNTKQRDIILSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGIKDKVERVDQ*
Ga0070750_1026738013300006916AqueousVSTKQRDIVLSIIRHGLTLGAGAMIASGKLDEAGANELVAALMAVIGIAWGISDKVKRVDQ*
Ga0070750_1042022523300006916AqueousLLFVTKFVDLSQEESEVSTKQRDIVLSIIRHGLTLGAGALIASGRLDEAGGNELVAAIMAIIGIAWGIKDKVERVDQ*
Ga0070750_1049717613300006916AqueousGGSEVSTKQKDIILSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVEQ*
Ga0070746_1006907913300006919AqueousVEEAQMSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0070746_1011958213300006919AqueousMSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAAVMAIIGIAWGISDKVKRVDQ*
Ga0070746_1019751133300006919AqueousSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0070746_1042446813300006919AqueousVEGAEVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0070746_1048239523300006919AqueousAVFCRKVYFFMSGGSEVSTKQKDIILSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVEQ*
Ga0075460_1024984723300007234AqueousIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0075460_1027839413300007234AqueousQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAIIGIAWGINDKVKRVDQ*
Ga0075463_1018911233300007236AqueousSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGISDKVKRVDQ
Ga0070745_126087213300007344AqueousLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0070752_116155033300007345AqueousMSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRAGQ*
Ga0070752_116629813300007345AqueousVEGAEVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVDQ*
Ga0070752_130974913300007345AqueousSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVDQ
Ga0070753_113655433300007346AqueousVEGAEVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVDQ*
Ga0099849_123529813300007539AqueousMSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVDQ*
Ga0070751_136274313300007640AqueousVEGAAVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGISDKVKRVDQ*
Ga0118687_1023774513300009124SedimentVSAKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0118687_1025707523300009124SedimentVSAKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVEQ*
Ga0118687_1032880613300009124SedimentVEGAEVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ*
Ga0118687_1035508523300009124SedimentTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVDQ*
Ga0129345_118301113300010297Freshwater To Marine Saline GradientVEGAEVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0129342_104591843300010299Freshwater To Marine Saline GradientVEGAEVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVDQ*
Ga0136656_128135813300010318Freshwater To Marine Saline GradientSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ*
Ga0136549_1007741343300010389Marine Methane Seep SedimentVIAKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVDQ*
Ga0181577_1047206013300017951Salt MarshVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGISDKVKRVD
Ga0181577_1075923323300017951Salt MarshMSTKQRDIVLSIIRHGLTLGAGALIASGRLDEAGANELVAALMAVIGIAWGINDKVKRVD
Ga0181577_1084890323300017951Salt MarshVSTKQKDIVLSIIRHLLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRAG
Ga0181577_1087572523300017951Salt MarshVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAAVMAIIGIAWGISDKVKRVD
Ga0181577_1090960123300017951Salt MarshTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGISDKVKRVDQ
Ga0181590_1037025713300017967Salt MarshVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVD
Ga0181592_1085090213300018421Salt MarshSIIRHGLTLGAGALIASGKLDEAGANELVAALMAIIGIAWGINDKVKRVDQ
Ga0181591_1045222813300018424Salt MarshKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAIIGIAWGINDKVKRVDQ
Ga0194021_104615523300019703SedimentVSTKQKDIILSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVD
Ga0194016_105775023300019708SedimentVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAAVMAIIGIAWGISDKVKRVD
Ga0194029_102077133300019751FreshwaterVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVD
Ga0194029_109076623300019751FreshwaterVTTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVD
Ga0213858_10000122513300021356SeawaterMSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVD
Ga0213864_1052577523300021379SeawaterVSTKQKDIILSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVE
Ga0222718_1039332813300021958Estuarine WaterVSAKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVE
Ga0222718_1040442033300021958Estuarine WaterVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAAVMAIIGIAWGINDKVKRVD
Ga0222719_1023905333300021964Estuarine WaterVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVD
Ga0222719_1056924233300021964Estuarine WaterRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0196883_101547413300022050AqueousDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0196883_104608823300022050AqueousQKDIVLSIIRHLLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRAGQ
Ga0212024_104185513300022065AqueousMGTKQRDIILSIIRHGLTLGAGALIASGKIDEAGGNELVAALMAIIGIAWGIKDKVERVD
Ga0212024_106449823300022065AqueousMSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGISDKVKRVD
Ga0212024_106507423300022065AqueousVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVD
Ga0212024_106841623300022065AqueousMSTKQRDIILSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVD
Ga0212021_112149523300022068AqueousMSAKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVD
Ga0196897_104754113300022158AqueousSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0196891_106212433300022183AqueousIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0196891_107159713300022183AqueousAEVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVDQ
Ga0196891_107466223300022183AqueousQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ
Ga0196899_100423013300022187AqueousVEEAQMSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0196899_105147833300022187AqueousLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGISDKVKRVDQ
Ga0196899_111612113300022187AqueousVEGAEVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAIIGIAWGINDKVKRVDQ
Ga0196899_112262733300022187AqueousGAQMSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ
Ga0255781_1006130013300022934Salt MarshVEGAEVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0255781_1034036713300022934Salt MarshMSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAAVMAIIGIAWGISDKVKRVD
Ga0208149_103691413300025610AqueousMSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVD
Ga0208149_105187713300025610AqueousVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAIIGIAWGINDKVKRVD
Ga0208004_103938413300025630AqueousAQMSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0208898_105213913300025671AqueousVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVD
Ga0208150_105442533300025751AqueousVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVD
Ga0208899_124239213300025759AqueousLLFVTKFVDLSQEESEVSTKQRDIVLSIIRHGLTLGAGALIASGRLDEAGGNELVAAIMAIIGIAWGIKDKVERVDQ
Ga0208899_126605723300025759AqueousGGSEVSTKQKDIILSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVEQ
Ga0208767_111767413300025769AqueousVEGAEVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ
Ga0208767_125169613300025769AqueousAVFCRKVYFFMSGGSEVSTKQKDIILSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVEQ
Ga0208427_115378713300025771AqueousVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVD
Ga0208785_102416743300025815AqueousLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0208542_109764013300025818AqueousMSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVD
Ga0208645_112240513300025853AqueousVEGAEVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAVIGIAWGINDKVKRVDQ
Ga0208645_115267833300025853AqueousIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ
Ga0208644_130384723300025889AqueousVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAAVMAIIGVAWGISDKVKRVD
Ga0348335_021451_2867_30673300034374AqueousVEGAEVSTKQKDIVLSIIRHLLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRAGQ
Ga0348335_140278_41_2263300034374AqueousMSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVD
Ga0348335_171892_1_1833300034374AqueousSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAIIGIAWGINDKVKRVDQ
Ga0348336_074278_25_2253300034375AqueousVEGAEVNTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ
Ga0348336_104108_779_9523300034375AqueousQRDIILSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0348336_155902_447_6473300034375AqueousVEGAEVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGINDKVKRVDQ
Ga0348336_158752_25_2253300034375AqueousVEGAEVSTKQKDIVLSIIRHGLTLGAGALIASGKLDEAGGNELVAALMAIIGIAWGISDKVKRVDQ
Ga0348336_159502_25_2253300034375AqueousVEGAEVSTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGISDKVKRVDQ
Ga0348336_163082_420_6203300034375AqueousVEGAEVTTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0348337_123098_611_7903300034418AqueousTKQRDIVLSIIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ
Ga0348337_141418_3_1523300034418AqueousIRHGLTLGAGALIASGKLDEAGANELVAALMAVIGIAWGINDKVKRVDQ


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