Metagenome / Metatranscriptome Family F074837

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074837
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	48 residues
Representative Sequence	MYENCTLPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRVDY
Number of Associated Samples	71
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.69 %
% of genes near scaffold ends (potentially truncated)	77.31 %
% of genes from short scaffolds (< 2000 bps)	89.08 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.479 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.092 % of family members)
Environment Ontology (ENVO)	Unclassified (52.101 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.983 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.95% β-sheet: 2.56% Coil/Unstructured: 79.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF14339	DUF4394	10.08
PF08241	Methyltransf_11	1.68
PF01757	Acyl_transf_3	1.68
PF01739	CheR	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.68
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	89.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.04 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	89.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.36 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	89.92 %
Unclassified	root	N/A	2.52 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	89.92 %
Unclassified	root	N/A	2.52 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	89.92 %
Unclassified	root	N/A	2.52 %
Bradyrhizobium sp. 139	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005180\|Ga0066685_10517781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300005332\|Ga0066388_101001942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1399	Open in IMG/M
3300005332\|Ga0066388_101416791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1208	Open in IMG/M
3300005332\|Ga0066388_105005302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300005363\|Ga0008090_10002543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300005363\|Ga0008090_10263758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	861	Open in IMG/M
3300005467\|Ga0070706_100711095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	931	Open in IMG/M
3300005713\|Ga0066905_100899562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300005713\|Ga0066905_101523364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300005764\|Ga0066903_100232727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2813	Open in IMG/M
3300005764\|Ga0066903_101429238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1301	Open in IMG/M
3300005764\|Ga0066903_102721794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	959	Open in IMG/M
3300005764\|Ga0066903_104478851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300005764\|Ga0066903_106713775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300005764\|Ga0066903_108026986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300005764\|Ga0066903_108073658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300005764\|Ga0066903_108340684	Not Available	529	Open in IMG/M
3300005764\|Ga0066903_108887884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300005764\|Ga0066903_109152785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300006028\|Ga0070717_10215201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1687	Open in IMG/M
3300006603\|Ga0074064_11663897	Not Available	512	Open in IMG/M
3300006852\|Ga0075433_11229135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300009792\|Ga0126374_10241216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1173	Open in IMG/M
3300010046\|Ga0126384_10177017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1668	Open in IMG/M
3300010358\|Ga0126370_10539904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	994	Open in IMG/M
3300010358\|Ga0126370_10753475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300010360\|Ga0126372_10102846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2154	Open in IMG/M
3300010360\|Ga0126372_11130342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300010361\|Ga0126378_10454955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1394	Open in IMG/M
3300010361\|Ga0126378_13102053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300010362\|Ga0126377_12790045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300010366\|Ga0126379_10581822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1203	Open in IMG/M
3300010366\|Ga0126379_11155728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	880	Open in IMG/M
3300010376\|Ga0126381_100829555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1328	Open in IMG/M
3300010376\|Ga0126381_100889517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1282	Open in IMG/M
3300010376\|Ga0126381_101689556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300010376\|Ga0126381_104959474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300010398\|Ga0126383_10441367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1349	Open in IMG/M
3300010398\|Ga0126383_10831362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1008	Open in IMG/M
3300010868\|Ga0124844_1286647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300011271\|Ga0137393_10044619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3438	Open in IMG/M
3300011271\|Ga0137393_10689617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300012189\|Ga0137388_10144791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2097	Open in IMG/M
3300012206\|Ga0137380_10047972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3917	Open in IMG/M
3300012354\|Ga0137366_10274105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1246	Open in IMG/M
3300012362\|Ga0137361_11692483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300012582\|Ga0137358_10684655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300012923\|Ga0137359_11474999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300012948\|Ga0126375_10729453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300016270\|Ga0182036_10532079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300016294\|Ga0182041_10307204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1317	Open in IMG/M
3300016294\|Ga0182041_11298498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300016319\|Ga0182033_10339943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1252	Open in IMG/M
3300016319\|Ga0182033_11115171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300016319\|Ga0182033_11400465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300016341\|Ga0182035_10341488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1241	Open in IMG/M
3300016341\|Ga0182035_10728958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300016341\|Ga0182035_11493074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300016404\|Ga0182037_10838701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300016404\|Ga0182037_11367314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300018433\|Ga0066667_10655573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300021560\|Ga0126371_10353394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1605	Open in IMG/M
3300021560\|Ga0126371_11150026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	914	Open in IMG/M
3300021560\|Ga0126371_11317798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855	Open in IMG/M
3300025915\|Ga0207693_10136310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1930	Open in IMG/M
3300025928\|Ga0207700_11290886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300027576\|Ga0209003_1101581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300028047\|Ga0209526_10037468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3415	Open in IMG/M
3300031546\|Ga0318538_10015080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3321	Open in IMG/M
3300031549\|Ga0318571_10274059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300031573\|Ga0310915_10264082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1212	Open in IMG/M
3300031573\|Ga0310915_10330790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1079	Open in IMG/M
3300031573\|Ga0310915_11275373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300031640\|Ga0318555_10050035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2116	Open in IMG/M
3300031680\|Ga0318574_10094380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1650	Open in IMG/M
3300031719\|Ga0306917_10935870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300031719\|Ga0306917_11506856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300031744\|Ga0306918_10261145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1324	Open in IMG/M
3300031744\|Ga0306918_10535479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	917	Open in IMG/M
3300031748\|Ga0318492_10381331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300031764\|Ga0318535_10300170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300031764\|Ga0318535_10396857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300031770\|Ga0318521_10250461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1033	Open in IMG/M
3300031770\|Ga0318521_10986462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300031792\|Ga0318529_10173175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	998	Open in IMG/M
3300031793\|Ga0318548_10007490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4121	Open in IMG/M
3300031796\|Ga0318576_10570592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300031797\|Ga0318550_10017290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2916	Open in IMG/M
3300031797\|Ga0318550_10635293	Not Available	512	Open in IMG/M
3300031819\|Ga0318568_10403804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	851	Open in IMG/M
3300031821\|Ga0318567_10271496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	954	Open in IMG/M
3300031833\|Ga0310917_10902919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300031859\|Ga0318527_10041030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1770	Open in IMG/M
3300031879\|Ga0306919_10941249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300031890\|Ga0306925_10419072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1433	Open in IMG/M
3300031890\|Ga0306925_11397530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300031893\|Ga0318536_10399084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300031893\|Ga0318536_10510743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300031894\|Ga0318522_10144586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	895	Open in IMG/M
3300031896\|Ga0318551_10914341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300031910\|Ga0306923_10021763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6795	Open in IMG/M
3300031910\|Ga0306923_10295988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1849	Open in IMG/M
3300031910\|Ga0306923_10336487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1722	Open in IMG/M
3300031910\|Ga0306923_11460869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300031941\|Ga0310912_10240466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1391	Open in IMG/M
3300031941\|Ga0310912_10742951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	759	Open in IMG/M
3300031941\|Ga0310912_10744839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300031942\|Ga0310916_10012764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5680	Open in IMG/M
3300031942\|Ga0310916_10306503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1345	Open in IMG/M
3300031942\|Ga0310916_11159939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300031946\|Ga0310910_11531358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300031981\|Ga0318531_10102925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1259	Open in IMG/M
3300032051\|Ga0318532_10353927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300032060\|Ga0318505_10632066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300032063\|Ga0318504_10490706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300032090\|Ga0318518_10700602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300032261\|Ga0306920_100041171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6679	Open in IMG/M
3300032261\|Ga0306920_101661574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	906	Open in IMG/M
3300032261\|Ga0306920_101715217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.16%
Plants	Host-Associated → Plants	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.67%
Loam	Environmental → Terrestrial → Soil → Loam	18.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.68%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.68%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066685_105177812	3300005180	Soil	CTIPTFELCVQEVIAGNRGFCIPNPRWQAPAPAPRQPRGQRKRVDY*
Ga0066388_1010019421	3300005332	Tropical Forest Soil	GVMHENCSVRTFEMCVQEVIAGNRGFCIPNPRWQGPRSGGRVTGARRKRVNY*
Ga0066388_1014167913	3300005332	Tropical Forest Soil	TLPTFELCVQEVIAGNRGFCIPNPRWQAPGPAARGPRGQRKRVDY*
Ga0066388_1050053021	3300005332	Tropical Forest Soil	GVMHENCSVRTFEMCVQEVIAGNRGFCNPNPHWQGPRPGGRETAARRKRVDY*
Ga0008090_100025431	3300005363	Tropical Rainforest Soil	KIPTFELCVQEVIAGNRGFCIPNPRWQARRPTARQPGRQRKRVDY*
Ga0008090_102637581	3300005363	Tropical Rainforest Soil	MYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRGDY*
Ga0070706_1007110953	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	TFELCVQEVIAGNRGFCIPNPRWQAPRPAARQPRGQRKRVDY*
Ga0066905_1008995622	3300005713	Tropical Forest Soil	MYENCTLPTFEMCVREVIAGNRGFCIPNPRWQGPTPSARQPGGRRKRVDY*
Ga0066905_1015233642	3300005713	Tropical Forest Soil	RPLARAGGHRRRGVMHENCSVRTFEMCVQEVIAGNRGFCIPNPRWQGPRSGGRETGARRKRVNY*
Ga0066903_1002327272	3300005764	Tropical Forest Soil	MRENCSMRTLEMCVQEVIAGNRGFCIPNPRWQGPAREVRQPGGRRKRVDY*
Ga0066903_1014292382	3300005764	Tropical Forest Soil	MCVQEVIAGNRGFCIPNPRWQAPGPAARQPRGQRRRADY*
Ga0066903_1027217943	3300005764	Tropical Forest Soil	EIGGNAMYENCSIPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY*
Ga0066903_1044788511	3300005764	Tropical Forest Soil	IGGNAMYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRSKARQLGGQRKRGDY*
Ga0066903_1067137751	3300005764	Tropical Forest Soil	MHENCSVRTFEMCVQEVIAGNRGFCNPNPHWQGPRPGGRETGPRRKRANY*
Ga0066903_1080269861	3300005764	Tropical Forest Soil	IGGGVMHENCTIPTFEMCVQEVIAGNRGFCIPNPRWQGPRPGGRETGARRKRANY*
Ga0066903_1080736581	3300005764	Tropical Forest Soil	YENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPSGQRKRGEY*
Ga0066903_1083406841	3300005764	Tropical Forest Soil	CVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY*
Ga0066903_1088878841	3300005764	Tropical Forest Soil	EIGGNAMYENCSIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGRRKRVDY*
Ga0066903_1091527851	3300005764	Tropical Forest Soil	MYENCKIPTFELCVQEVIAGNRGFCIPNPRWQAPRPPARQPGGGRKRVDY*
Ga0070717_102152011	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MHENCTLPTFELCVQEVIAGNRGFCIPNPRWQAPSPAARQPRGQRKRVDY*
Ga0074064_116638972	3300006603	Soil	VQEVIAGNRGFCIPNPRWQVPAPAPRQPRGRRRRVDY*
Ga0075433_112291351	3300006852	Populus Rhizosphere	MYENCTIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAPRQPRGQRKRVDY*
Ga0126374_102412163	3300009792	Tropical Forest Soil	PTFELCVQEVIAGNRGFCIPNPRWQAPKPKDRQPGGRRKRVDN*
Ga0126384_101770172	3300010046	Tropical Forest Soil	MYENCTLPTFEMCVQEVIAGNRGFCIPNPRWQGPTPSARQPGGRRKRVDY*
Ga0126370_105399041	3300010358	Tropical Forest Soil	MYENCTLPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRVDY*
Ga0126370_107534751	3300010358	Tropical Forest Soil	MYENCTLPTFELCVQEVIAGNRGFCIPNPRWQAPGPAARQPRGQRRRADY*
Ga0126372_101028463	3300010360	Tropical Forest Soil	IPTFELCVQEVIAGNRGFCIPNPRWQAPAPAARQPRGQRKRVDY*
Ga0126372_111303422	3300010360	Tropical Forest Soil	MCVQEVIAGNRGFCIPNPRWQAPAPAPRQPRGQRKRVDY*
Ga0126378_104549551	3300010361	Tropical Forest Soil	IAGGAMYENCTLPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRVDY*
Ga0126378_131020532	3300010361	Tropical Forest Soil	CVQEVIAGNRGFCIPNPRWQAPGPAARQPRGQRKRVDY*
Ga0126377_127900451	3300010362	Tropical Forest Soil	YENCTLPTFEMCVQEVIAGNRGFCIPNPRWQGPTPSARQPGGRRKRVDY*
Ga0126379_105818221	3300010366	Tropical Forest Soil	MHENCTIPTFEMCVQEVIAGNRGFCIPNPRWQGPRPGGRETGARRKRANY
Ga0126379_111557281	3300010366	Tropical Forest Soil	LCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY*
Ga0126381_1008295551	3300010376	Tropical Forest Soil	VQEVIAGNRGFCIPNPRWQGPTPSARQPGGRRKRVDY*
Ga0126381_1008895173	3300010376	Tropical Forest Soil	MHENCTLPTFELCVQEVIAGNRGFCIPNPRWQAPGPAARQPRGQRKRVDY*
Ga0126381_1016895561	3300010376	Tropical Forest Soil	MYENCKIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRVDY*
Ga0126381_1049594741	3300010376	Tropical Forest Soil	AMYENCKIPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRVDY*
Ga0126383_104413672	3300010398	Tropical Forest Soil	MHENCTLPTFEMCVQEVIAGNRGFCIPNPRWQAPGPAARQPRGQRKRVDY*
Ga0126383_108313622	3300010398	Tropical Forest Soil	GGVMHENCTIPTFEMCVQEVIAGNRGFCIPNPRWQGPRSGGRETGARRKRVNY*
Ga0124844_12866472	3300010868	Tropical Forest Soil	IPTFEMCVQEVIAGNRGFCIPNPRWQDPGPAARQPRGQRKRVDY*
Ga0137393_100446191	3300011271	Vadose Zone Soil	LTEIAGGAMYENCTIPTFAMCVQEVIAGNRGFCIPNPRWQVPGPAPRQPRGQRKRGDY*
Ga0137393_106896172	3300011271	Vadose Zone Soil	LTEIAGGAMYENCTIPTFAMCVQEVIAGNRGFCIPNPRWQAPGPAPRQPRGQRKRVDY*
Ga0137388_101447913	3300012189	Vadose Zone Soil	CVQEVIAGNRGFCIPNPRWQVPAPAPRQPRGQRKRVDY*
Ga0137380_100479721	3300012206	Vadose Zone Soil	FEMCVQEVIAGNRGFCIPNPRWQGPRLGGRETGARRKRVDY*
Ga0137366_102741051	3300012354	Vadose Zone Soil	IGGGVMHENCTIPTFEMCVQEVIAGNRGFCIPNPRWQGPRPGGRETGARRKRVDY*
Ga0137361_116924832	3300012362	Vadose Zone Soil	PTFELCVQEVIAGNRGFCIPNPRWQAPRPAARQPRGQRKRVDY*
Ga0137358_106846551	3300012582	Vadose Zone Soil	MHENCTLPTFELCVQEVIAGNRGFCIPNPRWQVPGPAPRQPRGQRKRVDY*
Ga0137359_114749991	3300012923	Vadose Zone Soil	GGAMYENCTIPTFELCVQEVIAGNRGFCIPNPRWQAPRPAARQPRGQRKRVDY*
Ga0126375_107294532	3300012948	Tropical Forest Soil	YENCSIPTFELCVQEVIAGNRGFCIPNPRWQAPAPAARQPRGQRKRVDY*
Ga0182036_105320792	3300016270	Soil	PTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0182041_103072041	3300016294	Soil	MYENCALPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKR
Ga0182041_112984982	3300016294	Soil	GNAMYENCNIPTFELCVQEVIAGNRGFCIPKPRWQAPRPTARQPGGQRKRVDY
Ga0182033_103399433	3300016319	Soil	ALTEIGGGAMYENCTLPTFEMCVREVIAGNRGFCIPNPRWQGPTPSARHPGGRRKRVDY
Ga0182033_111151712	3300016319	Soil	VQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0182033_114004652	3300016319	Soil	FELCVQEVIAGNRGFCIPNPRWQAPRPSARQPGGRRKRVDN
Ga0182035_103414881	3300016341	Soil	AMYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRVDY
Ga0182035_107289582	3300016341	Soil	EVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRVDY
Ga0182035_114930742	3300016341	Soil	QEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0182037_108387012	3300016404	Soil	PTFELCVQEVIAGNRGFCIPNPRWQAPGPAVRQPRGQRRRIDY
Ga0182037_113673142	3300016404	Soil	QEVIAGNRGFCIPNPRWQAPGPAARQPRGQRKRIDY
Ga0066667_106555731	3300018433	Grasslands Soil	MHENCTLPTFELCVQEVIAGNRGFCIPNPRWQVPAPAPRQPRGQRKRVDY
Ga0126371_103533944	3300021560	Tropical Forest Soil	MYENCTLPTFEMCVQEVIAGNRGFCIPNPRWQGPTPSARQPGGRRKRVDY
Ga0126371_111500262	3300021560	Tropical Forest Soil	MHENCTIPTFEMCVQEVIAGNRGFCIPNPRWQGPRSGGRETGARRKRVNY
Ga0126371_113177981	3300021560	Tropical Forest Soil	MYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGEY
Ga0207693_101363101	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MHENCTLPTFELCVQEVIAGNRGFCIPNPRWQAPGPAARQPRGQRKRVDY
Ga0207700_112908861	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MHENCTLPTFEMCVQEVIAGNRGFCIPNPRWQAPGPAPRQPRGQRK
Ga0209003_11015811	3300027576	Forest Soil	GGAMYENCTIPTFELCVQEVIAGNRGFCIPNPRWQPPRPAARQPRGQRKRVDY
Ga0209526_100374682	3300028047	Forest Soil	MYENCTIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAARQPRGQRRRVDY
Ga0318538_100150801	3300031546	Soil	EVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0318571_102740592	3300031549	Soil	NCKIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAVRQPRGQRRRIDY
Ga0310915_102640821	3300031573	Soil	MHENCSVRTFEMCVQEVIAGNRGLLQSEPALAGAPPGGRETGPRRKRVDY
Ga0310915_103307902	3300031573	Soil	MYENCTLPTFEMCVQEVIAGNRGFCNPNPRWQDPSPAVRQTGARRKRVDY
Ga0310915_112753731	3300031573	Soil	TFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPRGQRKRVDN
Ga0318555_100500353	3300031640	Soil	YENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0318574_100943801	3300031680	Soil	LSEIGGNAMYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0306917_109358702	3300031719	Soil	SEIGGNAMYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0306917_115068562	3300031719	Soil	TEIAGGAMYENCKIPTFELCVQEVIAGNRGFCIPNPRWQAPRPPARQPGGGRKRVDY
Ga0306918_102611453	3300031744	Soil	EIGGNAMYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRVDY
Ga0306918_105354792	3300031744	Soil	ELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRVDY
Ga0318492_103813312	3300031748	Soil	MYENCALPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRVDY
Ga0318535_103001701	3300031764	Soil	ENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRVDY
Ga0318535_103968572	3300031764	Soil	YENCTLPTFEMCVREVIAGNRGFCIPNPRWQGPTPSARQPGRRRKRVDY
Ga0318521_102504611	3300031770	Soil	NAMYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRVDY
Ga0318521_109864621	3300031770	Soil	YENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPRGQRKRVDN
Ga0318529_101731751	3300031792	Soil	IGGGVMHENCTLPTFEMCVQEVIAGNRGFCIPNPRWQAPGPAVRQPRGQRRRIDY
Ga0318548_100074908	3300031793	Soil	MHENCTIPTFEMCVREVIAGNRGFCNPNPRWQGPRPGGRETAARRKRVAY
Ga0318576_105705921	3300031796	Soil	ENCTIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAPRQPRGQRKRVDY
Ga0318550_100172901	3300031797	Soil	CVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0318550_106352931	3300031797	Soil	CVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRVDY
Ga0318568_104038042	3300031819	Soil	NCTLPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0318567_102714963	3300031821	Soil	LTEIGGGAMYENCKIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAVRQPRGQRRRIDY
Ga0310917_109029191	3300031833	Soil	NCNIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAPRQPRGQRKRVDY
Ga0318527_100410301	3300031859	Soil	SAEGSENCTIPTFEMCVREVIAGNRGFCNPNPRWQGPRPGGRETAARRKRVAY
Ga0306919_109412491	3300031879	Soil	LPTFEMCVQEVIAGNRGFCIPNPRWQAPGPAARQPRGQRRRADY
Ga0306925_104190723	3300031890	Soil	MYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRVDY
Ga0306925_113975301	3300031890	Soil	MYENCTLPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPRGQRKRVDN
Ga0318536_103990841	3300031893	Soil	MCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRVDY
Ga0318536_105107431	3300031893	Soil	NCTIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAPRQPRGQRKRVDY
Ga0318522_101445861	3300031894	Soil	ENCSIPTFELCVQEVIAGNRGFCIPNPRWQAPRPSARQPGGRRKRVDN
Ga0318551_109143412	3300031896	Soil	LTEIGGGAMYENYKIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAVRQPRGQRRRIDY
Ga0306923_100217631	3300031910	Soil	MYENCTLPTFEMCVREVIAGNRGFCIPNPRWQGPTPSARQPGGRRKRVDY
Ga0306923_102959883	3300031910	Soil	ELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0306923_103364873	3300031910	Soil	YENCTLPTFELCVQEVIAGNRGFCIPNPRWQAPRPKARQPRGQRKRVDN
Ga0306923_114608691	3300031910	Soil	LCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGRRKRVDY
Ga0310912_102404663	3300031941	Soil	GGNAMYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRVDY
Ga0310912_107429512	3300031941	Soil	TFEMCVREVIAGNRGFCIPNPRWQGPTPSARHPGGRRKRVDY
Ga0310912_107448391	3300031941	Soil	EIAGGAMYENCTIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAPRQPRGQRKRVDY
Ga0310916_100127641	3300031942	Soil	GAMYENCTLPTFEMCVREVIAGNRGFCIPNPRWQGPTPSARHPGGRRKRVDY
Ga0310916_103065033	3300031942	Soil	FELCVQEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRGDY
Ga0310916_111599392	3300031942	Soil	QGVIAGNRGFCIPNPRWQAPRPPARQPGGGRKRVDY
Ga0310910_115313581	3300031946	Soil	GAMYENCTLPTFEMCVREVIAGNRGFCIPNPRWQGPTPSARQPGGRRKRVDY
Ga0318531_101029251	3300031981	Soil	QEVIAGNRGFCIPNPRWQAPRPKARQPGGQRKRVDY
Ga0318532_103539272	3300032051	Soil	TEIGGGAMYENYKIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAVRQPRGQRRRIDY
Ga0318505_106320661	3300032060	Soil	NIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRVDY
Ga0318504_104907062	3300032063	Soil	CVQEVIAGNRGFCIPNPRWQAPGPAVRQPRGQRRRIDY
Ga0318518_107006021	3300032090	Soil	CTIPTFELCVQEVIAGNRGFCIPNPRWQAPGPAARQPRGQRKRIDY
Ga0306920_1000411711	3300032261	Soil	DIGGGVMHENCTLPTFEMCVQEVIAGNRGFCIPNPRWQAPGPAARQPRGQRRRADY
Ga0306920_1016615741	3300032261	Soil	CNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGRQRKRVEY
Ga0306920_1017152171	3300032261	Soil	LSEIGGNAMYENCNIPTFELCVQEVIAGNRGFCIPNPRWQAPRPTARQPGGQRKRVDY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074837

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences