NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F074925

Metagenome / Metatranscriptome Family F074925

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F074925
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 65 residues
Representative Sequence MPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Number of Associated Samples 104
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 22.03 %
% of genes near scaffold ends (potentially truncated) 44.54 %
% of genes from short scaffolds (< 2000 bps) 94.12 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.118 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.445 % of family members)
Environment Ontology (ENVO) Unclassified
(24.370 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(39.496 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 79.37%    β-sheet: 0.00%    Coil/Unstructured: 20.63%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF00076RRM_1 20.17
PF03551PadR 10.08
PF01476LysM 4.20
PF09098Dehyd-heme_bind 3.36
PF00005ABC_tran 2.52
PF04972BON 1.68
PF01590GAF 0.84
PF12796Ank_2 0.84
PF13620CarboxypepD_reg 0.84
PF12860PAS_7 0.84
PF00872Transposase_mut 0.84
PF02897Peptidase_S9_N 0.84
PF04024PspC 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 10.08
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 10.08
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 10.08
COG1505Prolyl endopeptidase PreP, S9A serine peptidase familyAmino acid transport and metabolism [E] 0.84
COG1770Protease IIAmino acid transport and metabolism [E] 0.84
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.84

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.12 %
UnclassifiedrootN/A5.88 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886006|SwRhRL3b_contig_3550165All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium972Open in IMG/M
2162886012|MBSR1b_contig_8817604All Organisms → cellular organisms → Bacteria → Acidobacteria946Open in IMG/M
3300000956|JGI10216J12902_103194699All Organisms → cellular organisms → Bacteria2015Open in IMG/M
3300000956|JGI10216J12902_108154151All Organisms → cellular organisms → Bacteria1157Open in IMG/M
3300001686|C688J18823_11051749All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300002568|C688J35102_118569978All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium573Open in IMG/M
3300003310|D1draft_1007848All Organisms → cellular organisms → Bacteria4695Open in IMG/M
3300004114|Ga0062593_101073932All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium833Open in IMG/M
3300004114|Ga0062593_101287462All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300004156|Ga0062589_100121190All Organisms → cellular organisms → Bacteria1723Open in IMG/M
3300004156|Ga0062589_100464028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1054Open in IMG/M
3300004156|Ga0062589_101411924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium679Open in IMG/M
3300004463|Ga0063356_101562540All Organisms → cellular organisms → Bacteria980Open in IMG/M
3300004480|Ga0062592_100194679All Organisms → cellular organisms → Bacteria1421Open in IMG/M
3300004480|Ga0062592_100387717All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300004782|Ga0062382_10139265All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1015Open in IMG/M
3300004782|Ga0062382_10494914All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300005172|Ga0066683_10189418All Organisms → cellular organisms → Bacteria → Proteobacteria1269Open in IMG/M
3300005176|Ga0066679_10984391All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300005179|Ga0066684_10087032All Organisms → cellular organisms → Bacteria → Proteobacteria1886Open in IMG/M
3300005294|Ga0065705_10421713All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium857Open in IMG/M
3300005332|Ga0066388_104037225All Organisms → cellular organisms → Bacteria → Proteobacteria748Open in IMG/M
3300005333|Ga0070677_10234085All Organisms → cellular organisms → Bacteria → Acidobacteria904Open in IMG/M
3300005355|Ga0070671_101199787All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300005366|Ga0070659_101022166All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300005455|Ga0070663_101050563All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M
3300005468|Ga0070707_101640675All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300005468|Ga0070707_102068221All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300005471|Ga0070698_100580521All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300005518|Ga0070699_101650667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300005543|Ga0070672_100644625All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales925Open in IMG/M
3300005598|Ga0066706_11242307Not Available565Open in IMG/M
3300005615|Ga0070702_101267676All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300005844|Ga0068862_101328079All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300006041|Ga0075023_100478764All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300006358|Ga0068871_101712525All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300006876|Ga0079217_10087044All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300006876|Ga0079217_11480882All Organisms → cellular organisms → Bacteria → Proteobacteria535Open in IMG/M
3300006918|Ga0079216_10560372All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300006969|Ga0075419_11045212All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300009038|Ga0099829_11463763All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300009089|Ga0099828_11126539All Organisms → cellular organisms → Bacteria → Acidobacteria697Open in IMG/M
3300009094|Ga0111539_13026635All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300009098|Ga0105245_13112275All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300009137|Ga0066709_101338388All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300009148|Ga0105243_12758402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300009156|Ga0111538_11993242All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300009157|Ga0105092_10035728All Organisms → cellular organisms → Bacteria2645Open in IMG/M
3300009610|Ga0105340_1015996All Organisms → cellular organisms → Bacteria2945Open in IMG/M
3300009792|Ga0126374_11152229Not Available618Open in IMG/M
3300010337|Ga0134062_10377850All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium688Open in IMG/M
3300012038|Ga0137431_1053509All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1105Open in IMG/M
3300012200|Ga0137382_10637684All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium762Open in IMG/M
3300012212|Ga0150985_100403684All Organisms → cellular organisms → Bacteria → Proteobacteria846Open in IMG/M
3300012212|Ga0150985_111657083All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300012212|Ga0150985_114060027All Organisms → cellular organisms → Bacteria → Proteobacteria1488Open in IMG/M
3300012469|Ga0150984_115089962All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300012469|Ga0150984_122031707All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium552Open in IMG/M
3300012896|Ga0157303_10209014All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300012897|Ga0157285_10020655All Organisms → cellular organisms → Bacteria1399Open in IMG/M
3300012901|Ga0157288_10145161Not Available701Open in IMG/M
3300012912|Ga0157306_10099312All Organisms → cellular organisms → Bacteria → Proteobacteria840Open in IMG/M
3300012922|Ga0137394_10947716All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium717Open in IMG/M
3300012929|Ga0137404_12240485All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300012958|Ga0164299_11134610All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300013308|Ga0157375_13016763All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium562Open in IMG/M
3300014969|Ga0157376_11913809All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium630Open in IMG/M
3300015200|Ga0173480_10310798All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium884Open in IMG/M
3300015371|Ga0132258_11675291All Organisms → cellular organisms → Bacteria1604Open in IMG/M
3300015374|Ga0132255_102497020All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300017965|Ga0190266_10688078All Organisms → cellular organisms → Bacteria → Proteobacteria636Open in IMG/M
3300018027|Ga0184605_10439760All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300018031|Ga0184634_10096811All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea1284Open in IMG/M
3300018055|Ga0184616_10195364All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300018072|Ga0184635_10081172All Organisms → cellular organisms → Bacteria1272Open in IMG/M
3300018073|Ga0184624_10481997All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300018083|Ga0184628_10311802Not Available827Open in IMG/M
3300018422|Ga0190265_12970352All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium566Open in IMG/M
3300018429|Ga0190272_11552082All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300018465|Ga0190269_10870673All Organisms → cellular organisms → Bacteria → Proteobacteria660Open in IMG/M
3300018468|Ga0066662_12511760All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300018482|Ga0066669_10463981All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1090Open in IMG/M
3300018482|Ga0066669_11374840All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300019767|Ga0190267_11609250Not Available508Open in IMG/M
3300019888|Ga0193751_1012208All Organisms → cellular organisms → Bacteria4482Open in IMG/M
3300020057|Ga0163151_10375563All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium734Open in IMG/M
3300020186|Ga0163153_10101364All Organisms → cellular organisms → Bacteria1712Open in IMG/M
3300020213|Ga0163152_10162132All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300021078|Ga0210381_10288077All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300021510|Ga0222621_1079730All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium692Open in IMG/M
3300025885|Ga0207653_10276131All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300025893|Ga0207682_10051992All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1697Open in IMG/M
3300025926|Ga0207659_10479638All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300025937|Ga0207669_11596764Not Available557Open in IMG/M
3300025938|Ga0207704_11285160All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium625Open in IMG/M
3300025972|Ga0207668_11872362All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300026319|Ga0209647_1241188All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium606Open in IMG/M
3300026320|Ga0209131_1123749All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1338Open in IMG/M
3300026548|Ga0209161_10383200All Organisms → cellular organisms → Bacteria → Acidobacteria620Open in IMG/M
3300027533|Ga0208185_1130323All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium584Open in IMG/M
3300027691|Ga0209485_1237291All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300027840|Ga0209683_10163946All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1018Open in IMG/M
3300027961|Ga0209853_1139252All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium594Open in IMG/M
3300028718|Ga0307307_10298809All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300028784|Ga0307282_10239294All Organisms → cellular organisms → Bacteria → Acidobacteria871Open in IMG/M
3300031538|Ga0310888_10486732All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium736Open in IMG/M
3300031538|Ga0310888_10877112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300031740|Ga0307468_100749196All Organisms → cellular organisms → Bacteria → Acidobacteria825Open in IMG/M
3300031740|Ga0307468_101387534All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium645Open in IMG/M
3300031908|Ga0310900_10037756All Organisms → cellular organisms → Bacteria → Proteobacteria2734Open in IMG/M
3300031965|Ga0326597_10919467All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300031995|Ga0307409_101561006All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium688Open in IMG/M
3300032075|Ga0310890_10584624All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium862Open in IMG/M
3300033811|Ga0364924_007965All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1918Open in IMG/M
3300034257|Ga0370495_0041359All Organisms → cellular organisms → Bacteria → Proteobacteria1389Open in IMG/M
3300034257|Ga0370495_0055344All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1201Open in IMG/M
3300034281|Ga0370481_0084123All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1051Open in IMG/M
3300034644|Ga0370548_088465All Organisms → cellular organisms → Bacteria → Acidobacteria611Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.88%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.04%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.04%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.04%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.20%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.20%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.36%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat2.52%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment2.52%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.52%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil2.52%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.52%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.52%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.68%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.84%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.84%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.84%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.84%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.84%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.84%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.84%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.84%
Down-Flow Hanging Sponge ReactorEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886006Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003310Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - L1-648F-DHSEngineeredOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004782Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2FreshEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300012038Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020057Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2EnvironmentalOpen in IMG/M
3300020186Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1EnvironmentalOpen in IMG/M
3300020213Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300033811Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17EnvironmentalOpen in IMG/M
3300034257Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17EnvironmentalOpen in IMG/M
3300034281Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwRhRL3b_0145.000020802162886006Switchgrass RhizosphereMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKANET
MBSR1b_0109.000079102162886012Miscanthus RhizosphereMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
JGI10216J12902_10319469913300000956SoilKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
JGI10216J12902_10815415113300000956SoilMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASES*
C688J18823_1105174913300001686SoilLSHQGFRMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP*
C688J35102_11856997823300002568SoilMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP*
D1draft_100784853300003310Down-Flow Hanging Sponge ReactorMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKSSEG*
Ga0062593_10107393223300004114SoilMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0062593_10128746213300004114SoilMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFETRKRNRKANEG*
Ga0062589_10012119023300004156SoilMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKANET*
Ga0062589_10046402813300004156SoilMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRK
Ga0062589_10141192423300004156SoilMPAPVRKSPSELQSQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFEGRKRNRKASET*
Ga0063356_10156254013300004463Arabidopsis Thaliana RhizosphereAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKANEP*
Ga0062592_10019467943300004480SoilMPAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0062592_10038771743300004480SoilFCYSYAMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0062382_1013926513300004782Wetland SedimentMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASEA*
Ga0062382_1049491423300004782Wetland SedimentRMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0066683_1018941823300005172SoilMIKLGMPAPVKKTPTELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASESS*
Ga0066679_1098439113300005176SoilRPLAPFLWAF*MIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASESS*
Ga0066684_1008703233300005179SoilMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASESS*
Ga0065705_1042171323300005294Switchgrass RhizosphereMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKANEA*
Ga0066388_10403722533300005332Tropical Forest SoilMPAPVKKTPSELQTQENDVYKALRTWYMIPGIQRELRHKENEAVQTVLETLETRKRNRKASENP*
Ga0070677_1023408543300005333Miscanthus RhizosphereMPAPVRKSPSELQSQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0070671_10119978723300005355Switchgrass RhizosphereMIECGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSDNP*
Ga0070659_10102216623300005366Corn RhizosphereMPAPVQKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0070663_10105056313300005455Corn RhizospherePSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP*
Ga0070685_1123593623300005466Switchgrass RhizosphereQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP*
Ga0070707_10164067513300005468Corn, Switchgrass And Miscanthus RhizosphereSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0070707_10206822123300005468Corn, Switchgrass And Miscanthus RhizosphereHWPGGKLPGLFLLGVRMIKLGMPAPVKKTPSELQTQENDVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASENP*
Ga0070698_10058052113300005471Corn, Switchgrass And Miscanthus RhizosphereRMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0070699_10165066723300005518Corn, Switchgrass And Miscanthus RhizosphereVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0070672_10064462513300005543Miscanthus RhizosphereVRKSPSELQSQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0066706_1124230723300005598SoilMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIHGIQRELRHKENEAVQTVLETLESRKRNRKASESS*
Ga0070702_10126767613300005615Corn, Switchgrass And Miscanthus RhizosphereMIKLGMPAPVKKTPSELQTQENDVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRSRKASETS*
Ga0068862_10132807913300005844Switchgrass RhizosphereCYSYAMPAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0075023_10047876413300006041WatershedsMAPQPLPLTPFSQSVRMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASESS*
Ga0068871_10171252513300006358Miscanthus RhizospherePLPLVLYSCYSYAMPAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0079217_1008704443300006876Agricultural SoilMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0079217_1148088223300006876Agricultural SoilMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASEP*
Ga0079216_1056037233300006918Agricultural SoilSPLFFGKVTPMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0075419_1104521213300006969Populus RhizosphereSYAMPAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0099829_1146376323300009038Vadose Zone SoilMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASESS*
Ga0099828_1112653913300009089Vadose Zone SoilTELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASESS*
Ga0111539_1302663523300009094Populus RhizosphereMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLES
Ga0105245_1311227523300009098Miscanthus RhizosphereMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRNKENEAVQTVLETLESRKRNRKSSENP*
Ga0066709_10133838813300009137Grasslands SoilELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASESS*
Ga0105243_1275840223300009148Miscanthus RhizosphereMPAPVKKTPSELQTQENDVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRSRKASETS*
Ga0111538_1199324233300009156Populus RhizosphereMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFETRKRNRKASET*
Ga0105092_1003572833300009157Freshwater SedimentMPPPAKKTASELQTQENEVYKTLRAWYMIPGIQRELRNKENEAVQTVLETLDRRRRTRMANEG*
Ga0105340_101599613300009610SoilPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0126374_1115222913300009792Tropical Forest SoilKDPAELQAQENEIHKMLRAWYLIPGMQRELRNKENEAVQMVLEIFEKRKKAAKAASSGQ*
Ga0134062_1037785023300010337Grasslands SoilMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENETVQTVLETLESRKRNRKASESS*
Ga0137431_105350933300012038SoilMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASEG*
Ga0137382_1063768423300012200Vadose Zone SoilMPAPVKKTPTELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0150985_10040368433300012212Avena Fatua RhizosphereMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKSTET*
Ga0150985_11165708323300012212Avena Fatua RhizosphereMPAPVKKTPSELQTQENDVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP*
Ga0150985_11406002733300012212Avena Fatua RhizosphereVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0150984_11508996213300012469Avena Fatua RhizospherePVKKTPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKSTET
Ga0150984_12203170713300012469Avena Fatua RhizosphereMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASENS*
Ga0157303_1020901423300012896SoilMPAPVKKSPSELQNHENEVYKPLRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKANET*
Ga0157285_1002065543300012897SoilSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0157288_1014516113300012901SoilMPAPVKKSPSELQNQENEVYKALRARYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKANET*
Ga0157306_1009931213300012912SoilVALYFRYTYAMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0137394_1094771633300012922Vadose Zone SoilMPAPVKKSPSELQTQENDVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASENP*
Ga0137404_1224048513300012929Vadose Zone SoilQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRSRKASETS*
Ga0164299_1113461013300012958SoilMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFETRKRNRKASET*
Ga0157375_1301676323300013308Miscanthus RhizosphereMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP*
Ga0157376_1191380923300014969Miscanthus RhizosphereMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSDNP*
Ga0173480_1031079833300015200SoilMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSE
Ga0132258_1167529123300015371Arabidopsis RhizosphereMPAPVKKSPSELQSQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0132255_10249702013300015374Arabidopsis RhizospherePLPLVLYSCYSYAMHAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET*
Ga0190266_1068807823300017965SoilMPAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0184605_1043976023300018027Groundwater SedimentMRVRLTLTLQLSPLSSQGFRMIKLGMPAPVKKTPSELQTQENEVDKALRTWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASDT
Ga0184634_1009681123300018031Groundwater SedimentMPPPLRKSPSELQAMENEVHKALRAWYMIPGIQRELRNKENEAVQMVLETLARRRRAQAASER
Ga0184616_1019536433300018055Groundwater SedimentWWKSSSSSTRRLPLPLVLYFCYSYAMPAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0184635_1008117213300018072Groundwater SedimentMPAPVKKSPSELQNQENDVYKALRALYMIPGIQPEIRHKENEAVQTVLEVFESRKRNRKASET
Ga0184624_1048199713300018073Groundwater SedimentMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFETRKRNRKASET
Ga0184628_1031180213300018083Groundwater SedimentAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASE
Ga0190265_1297035213300018422SoilPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASDG
Ga0190272_1155208223300018429SoilSLSSLVLLELAMPAPVKKSPSELQNQENEVYKPLRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0190269_1087067323300018465SoilMPAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASEP
Ga0066662_1251176013300018468Grasslands SoilMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASE
Ga0066669_1046398123300018482Grasslands SoilMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASESS
Ga0066669_1137484023300018482Grasslands SoilGVRGAGLSPLSYQGFRMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP
Ga0190267_1160925013300019767SoilMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASEP
Ga0193751_101220823300019888SoilMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKASENG
Ga0163151_1037556323300020057Freshwater Microbial MatLRGNGLLTLTPLPLFFDKVTRMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0163153_1010136413300020186Freshwater Microbial MatGRGLRGNGLLTLTPLPLFFDKVTRMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0163152_1016213213300020213Freshwater Microbial MatLTLTPLPLFFDKVTRMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0210381_1028807723300021078Groundwater SedimentKLGMPAPVKKTPSELQTQENEVYKTLRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP
Ga0222621_107973023300021510Groundwater SedimentMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP
Ga0207653_1027613113300025885Corn, Switchgrass And Miscanthus RhizosphereMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKR
Ga0207682_1005199223300025893Miscanthus RhizosphereMPAPVRKSPSELQSQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0207659_1047963823300025926Miscanthus RhizosphereMPAPVRKSPSELQSQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFEGRKRNRKASET
Ga0207669_1159676413300025937Miscanthus RhizosphereMPAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRK
Ga0207704_1128516023300025938Miscanthus RhizosphereMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFENGLH
Ga0207668_1187236223300025972Switchgrass RhizosphereSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKANET
Ga0209647_124118813300026319Grasslands SoilMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSDNP
Ga0209131_112374913300026320Grasslands SoilMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESPKRNRKSSDNP
Ga0209161_1038320023300026548SoilMPAPVKKTPSELQTQENEVYKALRTWYMIHGIQRELRHKENEAVQTVLETLESRKRNRKASESS
Ga0208185_113032323300027533SoilMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASEG
Ga0209485_123729123300027691Agricultural SoilSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0209683_1016394623300027840Wetland SedimentMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASEA
Ga0209853_113925213300027961Groundwater SandSYAMPAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASEG
Ga0307307_1029880913300028718SoilMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASDT
Ga0307282_1023929423300028784SoilMIKLGMPAPVKKTPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASDT
Ga0310888_1048673233300031538SoilLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP
Ga0310888_1087711223300031538SoilYAMPAPVKKSPSELQNQENDVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0307468_10074919613300031740Hardwood Forest SoilMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASEA
Ga0307468_10138753423300031740Hardwood Forest SoilMIKLGMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETFESRKRNRKSSDNP
Ga0310900_1003775633300031908SoilVDLVRYFCYSYAMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0326597_1091946723300031965SoilMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASDT
Ga0307409_10156100613300031995RhizosphereKWGWWKSESRLALPLVLYFCYTYAMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0310890_1058462433300032075SoilMPAPVRKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASET
Ga0364924_007965_994_11853300033811SedimentMPPPAKKSASELQVQENEVYKMLRAWYMIPGIQRELRNKENEAVQMVLETLDRRRRTRMASEG
Ga0370495_0041359_3_1703300034257Untreated Peat SoilMPAPVKKSPSELQNQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKR
Ga0370495_0055344_600_7913300034257Untreated Peat SoilMPAPVKKSPSELQTQENEVYKALRAWYMIPGIQRELRHKENEAVQTVLEVFESRKRNRKASES
Ga0370481_0084123_873_10493300034281Untreated Peat SoilMPAPVKKTPSELQTQENEVYKALRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRK
Ga0370548_088465_174_3683300034644SoilMPAPVKKTPSELQTQENEVYKTLRTWYMIPGIQRELRHKENEAVQTVLETLESRKRNRKSSENP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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