NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074959

Metagenome / Metatranscriptome Family F074959

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074959
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 81 residues
Representative Sequence MVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHGQEVIPLPDGRVTFVPVLGEAR
Number of Associated Samples 75
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 34.21 %
% of genes near scaffold ends (potentially truncated) 24.37 %
% of genes from short scaffolds (< 2000 bps) 63.03 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (51.261 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(28.571 % of family members)
Environment Ontology (ENVO) Unclassified
(29.412 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(63.025 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 26.17%    Coil/Unstructured: 73.83%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF04392ABC_sub_bind 5.04
PF00072Response_reg 4.20
PF07589PEP-CTERM 4.20
PF00196GerE 3.36
PF00583Acetyltransf_1 3.36
PF13365Trypsin_2 3.36
PF13419HAD_2 2.52
PF13289SIR2_2 1.68
PF04468PSP1 1.68
PF11236DUF3037 1.68
PF02585PIG-L 0.84
PF00106adh_short 0.84
PF13426PAS_9 0.84
PF11893DUF3413 0.84
PF09278MerR-DNA-bind 0.84
PF00383dCMP_cyt_deam_1 0.84
PF14319Zn_Tnp_IS91 0.84
PF02371Transposase_20 0.84
PF13280WYL 0.84
PF02954HTH_8 0.84
PF00211Guanylate_cyc 0.84
PF03992ABM 0.84
PF00296Bac_luciferase 0.84
PF13683rve_3 0.84
PF01699Na_Ca_ex 0.84
PF07726AAA_3 0.84
PF01977UbiD 0.84
PF01725Ham1p_like 0.84
PF07690MFS_1 0.84
PF00165HTH_AraC 0.84
PF11185DUF2971 0.84
PF13557Phenol_MetA_deg 0.84
PF01068DNA_ligase_A_M 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 5.04
COG1774Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development)Signal transduction mechanisms [T] 1.68
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 0.84
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.84
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.84
COG2120N-acetylglucosaminyl deacetylase, LmbE familyCarbohydrate transport and metabolism [G] 0.84
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.84
COG3547TransposaseMobilome: prophages, transposons [X] 0.84
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 0.84
COG0127Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase familyNucleotide transport and metabolism [F] 0.84
COG0387Cation (Ca2+/Na+/K+)/H+ antiporter ChaAInorganic ion transport and metabolism [P] 0.84
COG0530Ca2+/Na+ antiporterInorganic ion transport and metabolism [P] 0.84
COG0789DNA-binding transcriptional regulator, MerR familyTranscription [K] 0.84


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms51.26 %
UnclassifiedrootN/A48.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_100194658All Organisms → cellular organisms → Bacteria → Proteobacteria2678Open in IMG/M
3300004157|Ga0062590_101589764Not Available660Open in IMG/M
3300004643|Ga0062591_102148052Not Available579Open in IMG/M
3300005331|Ga0070670_100583530Not Available999Open in IMG/M
3300005339|Ga0070660_100989595Not Available710Open in IMG/M
3300005440|Ga0070705_100235549All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1276Open in IMG/M
3300005445|Ga0070708_100142978All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2220Open in IMG/M
3300005445|Ga0070708_100161608All Organisms → cellular organisms → Bacteria2087Open in IMG/M
3300005445|Ga0070708_100479530All Organisms → cellular organisms → Bacteria → Proteobacteria1173Open in IMG/M
3300005445|Ga0070708_100885689All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300005467|Ga0070706_100009110All Organisms → cellular organisms → Bacteria9243Open in IMG/M
3300005467|Ga0070706_100080016All Organisms → cellular organisms → Bacteria3025Open in IMG/M
3300005467|Ga0070706_100255698All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-11635Open in IMG/M
3300005467|Ga0070706_100855247All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300005467|Ga0070706_101068353Not Available743Open in IMG/M
3300005467|Ga0070706_101201832All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300005467|Ga0070706_101985046Not Available527Open in IMG/M
3300005468|Ga0070707_100075947All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium3241Open in IMG/M
3300005468|Ga0070707_100121063All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2541Open in IMG/M
3300005468|Ga0070707_100133185Not Available2417Open in IMG/M
3300005518|Ga0070699_100031637All Organisms → cellular organisms → Bacteria4568Open in IMG/M
3300005536|Ga0070697_100134288All Organisms → cellular organisms → Bacteria2077Open in IMG/M
3300005536|Ga0070697_100140308All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2032Open in IMG/M
3300005536|Ga0070697_100491729Not Available1072Open in IMG/M
3300005536|Ga0070697_100745374All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300005549|Ga0070704_100088912All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2296Open in IMG/M
3300005618|Ga0068864_100180618Not Available1929Open in IMG/M
3300006047|Ga0075024_100815628Not Available523Open in IMG/M
3300006050|Ga0075028_100001954All Organisms → cellular organisms → Bacteria7559Open in IMG/M
3300006354|Ga0075021_10000923All Organisms → cellular organisms → Bacteria → Proteobacteria15074Open in IMG/M
3300006852|Ga0075433_10428474Not Available1166Open in IMG/M
3300006914|Ga0075436_100475286Not Available912Open in IMG/M
3300007255|Ga0099791_10001017All Organisms → cellular organisms → Bacteria10827Open in IMG/M
3300007255|Ga0099791_10011201All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3758Open in IMG/M
3300007255|Ga0099791_10044460All Organisms → cellular organisms → Bacteria1977Open in IMG/M
3300007255|Ga0099791_10679947All Organisms → cellular organisms → Bacteria → Proteobacteria506Open in IMG/M
3300007258|Ga0099793_10187993Not Available988Open in IMG/M
3300007265|Ga0099794_10093850Not Available1492Open in IMG/M
3300007265|Ga0099794_10112111All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1367Open in IMG/M
3300009088|Ga0099830_10026705All Organisms → cellular organisms → Bacteria3844Open in IMG/M
3300009143|Ga0099792_10061769All Organisms → cellular organisms → Bacteria1861Open in IMG/M
3300009156|Ga0111538_11847737Not Available760Open in IMG/M
3300011269|Ga0137392_10114637All Organisms → cellular organisms → Bacteria2142Open in IMG/M
3300011270|Ga0137391_10147150All Organisms → cellular organisms → Bacteria2051Open in IMG/M
3300012096|Ga0137389_10631905Not Available920Open in IMG/M
3300012189|Ga0137388_10201733All Organisms → cellular organisms → Bacteria1793Open in IMG/M
3300012202|Ga0137363_10033358All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-13576Open in IMG/M
3300012202|Ga0137363_11299166Not Available616Open in IMG/M
3300012205|Ga0137362_10372764Not Available1236Open in IMG/M
3300012211|Ga0137377_10035461Not Available4548Open in IMG/M
3300012361|Ga0137360_10158052Not Available1804Open in IMG/M
3300012362|Ga0137361_10833364Not Available838Open in IMG/M
3300012363|Ga0137390_10093560All Organisms → cellular organisms → Bacteria2967Open in IMG/M
3300012363|Ga0137390_11308086Not Available671Open in IMG/M
3300012918|Ga0137396_10191538Not Available1502Open in IMG/M
3300012922|Ga0137394_10169434All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1861Open in IMG/M
3300012927|Ga0137416_10181637All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300012927|Ga0137416_10351312All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1236Open in IMG/M
3300012927|Ga0137416_11874624Not Available548Open in IMG/M
3300012927|Ga0137416_11938666Not Available540Open in IMG/M
3300012929|Ga0137404_11959231Not Available546Open in IMG/M
3300012930|Ga0137407_10056090All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3223Open in IMG/M
3300012931|Ga0153915_10452210Not Available1462Open in IMG/M
3300012944|Ga0137410_11500292Not Available588Open in IMG/M
3300015264|Ga0137403_11353600Not Available559Open in IMG/M
3300017961|Ga0187778_10189364Not Available1308Open in IMG/M
3300017974|Ga0187777_10207893Not Available1321Open in IMG/M
3300017997|Ga0184610_1002654All Organisms → cellular organisms → Bacteria4062Open in IMG/M
3300018058|Ga0187766_10369341All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium943Open in IMG/M
3300018063|Ga0184637_10612211Not Available613Open in IMG/M
3300020581|Ga0210399_10262040Not Available1442Open in IMG/M
3300021088|Ga0210404_10008145All Organisms → cellular organisms → Bacteria4236Open in IMG/M
3300021178|Ga0210408_10817578Not Available729Open in IMG/M
3300021432|Ga0210384_10013280All Organisms → cellular organisms → Bacteria8218Open in IMG/M
3300021432|Ga0210384_10872406Not Available799Open in IMG/M
3300021432|Ga0210384_11574207Not Available563Open in IMG/M
3300025908|Ga0207643_10008807All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5415Open in IMG/M
3300025910|Ga0207684_10007953All Organisms → cellular organisms → Bacteria9477Open in IMG/M
3300025910|Ga0207684_10195985All Organisms → cellular organisms → Bacteria1742Open in IMG/M
3300025910|Ga0207684_10230981All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1596Open in IMG/M
3300025910|Ga0207684_11738106Not Available502Open in IMG/M
3300025922|Ga0207646_10028538All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria5077Open in IMG/M
3300025922|Ga0207646_10030305All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium4906Open in IMG/M
3300025922|Ga0207646_10048248All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3817Open in IMG/M
3300025922|Ga0207646_10381582Not Available1273Open in IMG/M
3300026285|Ga0209438_1077147All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300026340|Ga0257162_1012871All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300026358|Ga0257166_1000115All Organisms → cellular organisms → Bacteria4450Open in IMG/M
3300026371|Ga0257179_1040712Not Available589Open in IMG/M
3300026482|Ga0257172_1013238Not Available1390Open in IMG/M
3300026507|Ga0257165_1026684Not Available995Open in IMG/M
3300026514|Ga0257168_1000163All Organisms → cellular organisms → Bacteria → Proteobacteria5204Open in IMG/M
3300026515|Ga0257158_1017294All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300026551|Ga0209648_10034683All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4391Open in IMG/M
3300026551|Ga0209648_10089948All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2541Open in IMG/M
3300026551|Ga0209648_10167425Not Available1716Open in IMG/M
3300026551|Ga0209648_10317732Not Available1100Open in IMG/M
3300027603|Ga0209331_1120288Not Available634Open in IMG/M
3300027655|Ga0209388_1096182Not Available850Open in IMG/M
3300027671|Ga0209588_1016020All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2309Open in IMG/M
3300027915|Ga0209069_10345716All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium802Open in IMG/M
3300028047|Ga0209526_10224049Not Available1295Open in IMG/M
3300028047|Ga0209526_10246347All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1224Open in IMG/M
3300028536|Ga0137415_10029900All Organisms → cellular organisms → Bacteria5365Open in IMG/M
3300029636|Ga0222749_10847468Not Available500Open in IMG/M
3300031820|Ga0307473_10034116All Organisms → cellular organisms → Bacteria2253Open in IMG/M
3300031820|Ga0307473_10285510Not Available1031Open in IMG/M
3300032180|Ga0307471_100526268Not Available1334Open in IMG/M
3300032180|Ga0307471_100682186Not Available1191Open in IMG/M
3300032180|Ga0307471_103282077Not Available573Open in IMG/M
3300032782|Ga0335082_10005958All Organisms → cellular organisms → Bacteria13309Open in IMG/M
3300032782|Ga0335082_11710188Not Available503Open in IMG/M
3300032893|Ga0335069_10445400All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP11512Open in IMG/M
3300034820|Ga0373959_0015450Not Available1402Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil28.57%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere28.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.20%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.20%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.36%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.52%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.52%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.52%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.52%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.68%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.84%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026340Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-AEnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026371Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-BEnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026507Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-BEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10019465813300000956SoilMVPPRWPDEQGRPIPTYPCPRCGQEVASRFKNFHVEHLRHVGWRIFHATTYVNWCGHGQEVIPLPLPDGRVTFVPVIGEAR*
Ga0062590_10158976413300004157SoilPIATYPCPRCGREVASRFRGFRVEPLSHVGWSLFRASSYINWRGHAQEVIPVPMRHGRVSFVPVLGETR*
Ga0062591_10214805223300004643SoilMVPAWWPDERGKPIATYPCPRCGREVASRFRGFRVEPLSHVGWSLFRASSYINWCGHAQEVIPVPM
Ga0070670_10058353023300005331Switchgrass RhizosphereMVPAWWPDERGKPIATYPCPRCGREVASRFRGFRVEPLSHVGWSLFRASSYINWCGHAQEVIPVPMRHGRVSFVPVLGETR*
Ga0070660_10098959513300005339Corn RhizosphereMVPAWWPDERGKPIATYPCPRCGREVASRFRGFRVEPLSHVGWSLFRASSYINWCGHAQEVIPVPMRHGRV
Ga0070705_10023554923300005440Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRPLPTYPCPRCGRETPVWFKGFRVEHLKHVGWQLYRPETYVSWCGHGQEVIPAPLADGRVTFVPVLGEAR*
Ga0070708_10014297833300005445Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHGQEVIPLPDGRVTFVPVLGEAR*
Ga0070708_10016160823300005445Corn, Switchgrass And Miscanthus RhizosphereLPLLRYHPAMVPPRWPDEQGRPLPTYPCPRCGRETPVWFKGFRVEHLKHVGWQLYRPETYVSWCGHGQEVIPAPLADGRVTFVPVLGEAR*
Ga0070708_10047953033300005445Corn, Switchgrass And Miscanthus RhizosphereMVPPIWPDEQGRPLPTYPCPRPGCGREVAVRFSGFRVEHLKHVGWQLFRAQTYVNWCGHGQEVIPFPRPDGLVAFVPVLGEAK*
Ga0070708_10088568923300005445Corn, Switchgrass And Miscanthus RhizosphereMTTPAMIPGQWPRPAGHEHGRPIPTYPCPRCGLEVASRFRGFRVENLRHVWWQLFRAETYVNWCGHAQEVIPLPLADGRVTFVPVLGEAT*
Ga0070706_10000911023300005467Corn, Switchgrass And Miscanthus RhizosphereMVPPIWPDEHGRPLPTYPCPPPGCGREVAVRFRGFRVEHLKHVGWQLFRAETYVNWCGHGQEVIPVPRRDGLVALVPVLGESS*
Ga0070706_10008001623300005467Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPAEHGRALPTYPCPPCGREVAARFRDFRVEHLAYVGWQVYRVASYVNWCGHGQEIIPFPLSDGPVRFVPLVGEAW*
Ga0070706_10016262023300005467Corn, Switchgrass And Miscanthus RhizosphereMRASVAGVVFWSLSGRALSALRSFVMVPPRWPDEQGRPIPTYPCVRCGLEVASRFRGFRVENLEHVGWRLFQPTSYVNWCGHAQEIIPVPLADGRVTFVPVLGEAR*
Ga0070706_10025569813300005467Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRPISTYPCPRCGLEVASRFRGFRVDNLRHVGWQVFRAETYVNWRGHAQEIIPLPLPDGRVTFVPVLGEAR*
Ga0070706_10085524723300005467Corn, Switchgrass And Miscanthus RhizosphereMIPGQWPRPAGHEHGRPIPTYPCPRCGLEVASRFRGFRVENLRHVWWQLFRAETYVNWCGHAQEVIPLP
Ga0070706_10106835313300005467Corn, Switchgrass And Miscanthus RhizosphereMQRASLPLLRCDLAMVPPRWPDEHGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQPFRAETYVNWCGHGQEVIPLPLPDGRVTFVPVLGEAR*
Ga0070706_10120183213300005467Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRLIPTYPCPRCGREVASRFRGFRVENLKHLGWALFQPTSYVNWCGHAQEIIPLPLADGRVTSLLSRDPFRDLRD
Ga0070706_10198504623300005467Corn, Switchgrass And Miscanthus RhizosphereVTPPIWPDEQGRPLPTHHCPRCGREVAVRFRGFRVEHLRHVGWQAYRVETYINWCGHGQEIVPFPLPDGWVTFVPVLGEAT*
Ga0070707_10007594743300005468Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRLIPTYPCPRCGREVASRFRGFRVENLKGLGWGLFQPTSYVNWCGHAQEIIPMPLADGRVTFVPVLGEAR*
Ga0070707_10012106373300005468Corn, Switchgrass And Miscanthus RhizosphereMLRPSMAIWLDEQGRPLPTYPCPRPGCGREVPVRFRGFRVEHLRHVGWQAYRVESYVNWCGHAQEVIPFPRPDWPVEFVPVLGEAT*
Ga0070707_10013318563300005468Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRPISTYPCPRCGLEVASRFRGFRVDNLRHVGWQVFRAETYVNWCGHAQEIIPLPLPDGRVTFVPVLGEAR*
Ga0070707_10053523733300005468Corn, Switchgrass And Miscanthus RhizosphereWSLSGRALSALRSFVMVPPRWPDEQGRPIPTYPCVRCGLEVASRFRGFRVENLEHVGWRLFQPTSYVNWCGHAQEIIPVPLADGRVTFVPVLGEAR*
Ga0070699_10003163733300005518Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRPIPTYPCVRCGLEVASRFRGFRVENLEHVGWRLFQPTSYVNWCGHAQEIIPVPLADGRVTFVPVLGEAR*
Ga0070697_10002886113300005536Corn, Switchgrass And Miscanthus RhizosphereMRASVAGVVFWSLSGRPLSALRSFVMVPPRWPDEQGRPIPTYPCVRCGLEVASRFRGFRVENLEHVGWRLFQPTSYVNWCGHAQEIIPVPLADGRVTFVPVLGEAR*
Ga0070697_10013428833300005536Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHGQKIIPFPLRDGRVTFVPVLGEAH*
Ga0070697_10014030823300005536Corn, Switchgrass And Miscanthus RhizosphereVVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQLFRAETYINWCGHGQEIIPLPLADGRVTFVPVLGDAR*
Ga0070697_10031469123300005536Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRLIPTYPCPRCGREVASRFRGFRVENLKHLGWALFQPTSYVNWCGHAQEIIPLPLADGRVTSLLSRDPFRDLRDDLLLD
Ga0070697_10049172913300005536Corn, Switchgrass And Miscanthus RhizosphereHGRPIPTYPCPRCGLEVASRFRGFRVENLRHVWWQLFRAETYVNWCGHAQEVIPLPLADGRVTFVPVLGEAT*
Ga0070697_10074537423300005536Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWHLFMPATYVNWCGHGQEIIPFPLPDGRVTFVPVLGEAR*
Ga0070704_10008891223300005549Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEKGRPLPTYPCPRCGREVAVRFKGFRVEHLKHVGWQLFRAETYVNWCGHGQEVIPVPLPDGRVTFVPVLGEAR*
Ga0068864_10018061833300005618Switchgrass RhizosphereMVPAWWPDERGKPIATYPCPRCGREVASRFRGFRVEHLSHVGWSLFRASSYINWCGHAQEVIPVPMRHGRVSFVPVLGETR*
Ga0075024_10081562813300006047WatershedsMVPPRWPDEQGRPIPPYPCPRCGLEVASRFRGFRVESLRHVGWQFFMPATYVNWCGHGQEIIIPFPLPDNRVTFVPVLGEVR*
Ga0075028_10000195493300006050WatershedsMVPPRRWPDELGRPIPTYPCPRCGREVASWFRSFRVEHLRHVGWRLFRPATYVNWCGHAQEVIPMPLADGRVTFVPVLGEAH*
Ga0075021_10000923153300006354WatershedsPYPCPRCGLEVASRFRGFRVESLRHVGWQFFMPATYVNWCGHGQEIIIPFPLPDNRVTFVPVLGEVR*
Ga0075433_1042847423300006852Populus RhizosphereMVPAWWPDERGKPIATYPCPRCGREVASRFRGFRVEPLSHVGWSLFRASSYINWCGHAQEVIPVPMPHGRVSFVPVLGETR*
Ga0075436_10047528613300006914Populus RhizosphereMVPPWWPDERGKPIATYPCPRCGREVASRFRGFRVEPLSHVGWSLFRASSYINWCGHAQEVIPVPMRHGRVSFVPVLGETR*
Ga0099791_1000101723300007255Vadose Zone SoilMVPPRWPDEQGRPLPTYPCPRCGRETPVRFKGFRVEHLKHVGWQLYRPETYVSWCGHGQEVIPVPLADRRVTFVPVLGEAR*
Ga0099791_1001120123300007255Vadose Zone SoilMHCLPDEHGRPIPTYPCPRCGLEVASRFKDFRVENLKHVGRQLFRIETYVNGCGHEQAVSPLLLAYGRMAFVPVLGEAR*
Ga0099791_1004446033300007255Vadose Zone SoilMVPPRWPDEQGRPLPTYPCPRCGREVAVRFKGFRVEHLKHVGWQLFRAETYVNWCGHGQEVIPLPLPDGRVTFVPVLWEAR*
Ga0099791_1067994713300007255Vadose Zone SoilPIPTYPCPRCGRKVASRFRGFRVEHLRHVGWQLFMPATYVNWCGHGQEIIPFPLPDGRVTFVPVVGEAR*
Ga0099793_1018799333300007258Vadose Zone SoilMVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHAQEIIPLPLPDGRVTFVPVLVEAT*
Ga0099794_1009385013300007265Vadose Zone SoilMVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHAQEIIPLPLPDGRVTFVPVLVEAT
Ga0099794_1011211133300007265Vadose Zone SoilRAMVSPRWPDEQGRPIPTYPCPRCGLEVASRFKDFRVENLKHVGRQLFRIETYVNGCGHGQPLLLAYGRMAFVPVLGEAR*
Ga0099830_1002670543300009088Vadose Zone SoilMVPPRWPDEQGRPIPTYPCPRCGPEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHAQEIIPLPLPDGRVTFVPVLVEAT*
Ga0099792_1006176913300009143Vadose Zone SoilMIPPRWPDEQGRPIPTYARPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHAQEIIPLPLPDGRVTFVPVLVEAT*
Ga0111538_1184773723300009156Populus RhizosphereMVPPWWPDERGKPIATYPCPRCGREVASRFRGFRVEHLSHVGWSLFRASSYINWCGHAQEVIPVPMPHGRVSFVPVLGETR*
Ga0137392_1011463713300011269Vadose Zone SoilMVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQAYRVETYVNWCGHAQEVIPLPREDGLVAFVPVLGEAR*
Ga0137391_1014715053300011270Vadose Zone SoilMVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWPAYRVETYVNWCGHAQEVIPLPPEDGLVAFVPVLGEAR*
Ga0137389_1063190533300012096Vadose Zone SoilMIPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHAQEIIPLPLPDGRVTFVPVLVEAT*
Ga0137388_1020173313300012189Vadose Zone SoilMVAPTGPNKQGRPLPTYPCPRCVRETPVRCKGFRVEHLKHVGWQLYRPETYVSWCGHGQEVIPVPLADRRVTFVPVLGEAR*
Ga0137363_1003335853300012202Vadose Zone SoilMVPRWPDEQGRPLPTYPCPRCGLEVASRFRGFRVENVRHVGWQLFRVETYVNWCGHAQKVIPFPLPDGHVTFVLVLREAR*
Ga0137363_1129916613300012202Vadose Zone SoilMTPPIWPDEQGRPLPTYPCRRPGCGREVAVRFRGFRVEHLRHVGWQAYRVETYVNWCGHGQEVIPVPRADGLVALVPVLGEAT*
Ga0137362_1037276423300012205Vadose Zone SoilMVPPRWPDEQGRPLPTYPCPRCGREVAVRFKGFRVEHLKHVGWQLFRAETYVNWCGHGQEVIPLPLPD
Ga0137377_1003546133300012211Vadose Zone SoilLCLLRYHPAMVPPRWPDEQGRRIPTYPCPRCGLEVASRFRGFRVENLRHVGWQLFQAETYVNWCGHGQEIIPLPLPDGRVTFVPVLGEAR*
Ga0137360_1015805223300012361Vadose Zone SoilMVPPRWPDEQGRPLPTYPCPRCGRDVAARFKGFRAEHLKHVGWQLFRAETYVNWCGHGQEVIPLPLAAGRVTFVPVLGEAR*
Ga0137361_1083336413300012362Vadose Zone SoilMVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHAQEIIPLPLPDGRVTFVPVLV
Ga0137390_1009356033300012363Vadose Zone SoilMVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQAYRVPREDGLVAFVPVLGEAR*
Ga0137390_1130808623300012363Vadose Zone SoilMVPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLGHVGWQAYRVETYVNWCGHGQEVIPLPLADGRVTFVPVLGDAK*
Ga0137396_1019153833300012918Vadose Zone SoilMVPPRWPDEQGRRMPTYPCPRCGREVASRFSGFRVEHLRHVGWQLFRAETYVNWCEHGQEVIPEPLSDGRVTFVPVLGEAR*
Ga0137394_1016943433300012922Vadose Zone SoilMHCLPAEHGRPIPTYPCPRCGLEVASRFKDFRVENLKHVGRQLFRIETYVNGCGHGQPLLLAYGRMAFVPVLGEAR*
Ga0137416_1018163743300012927Vadose Zone SoilLRYDPAMVPPRWPDEQGRRMPTYPCPRCGREVASRFSGFRVEHLRHVGWQLFRAETYVNWCEHGQEVIPEPLSDGRVTFVPVLGEAR*
Ga0137416_1035131223300012927Vadose Zone SoilLDRLRLLMHCLPAEHGRPIPTYPCPRCGLEVASRFKDFRVENLKHVGRQLFRIETYVNGCGHGQPLLLAYGRMAFVPVLGEAR*
Ga0137416_1187462413300012927Vadose Zone SoilMVPPRWPDEHGRPLPTYPCPRCGREVASRFRGFRVENLRHLGWALFQPTSYVNWCGHAQEIIPLP
Ga0137416_1193866613300012927Vadose Zone SoilMHCLPDEHGRPIPTYPCPRCGLEVASRFKDFRVENLKHVGRQLFRAATYVNWCGHGQEVSPLRLAYGRMAFVPVL
Ga0137404_1195923113300012929Vadose Zone SoilMHCLPDEHGRPIPTYPCPRCGLEVASRFKDFRVENLKHVGRQLFRIETYVNGCGHGQPLLLAYGRMAFVPVLGEAR*
Ga0137407_1005609053300012930Vadose Zone SoilMTPTFWLDENGRRIPTRPCPRPGCGRAVPVRLKGFCAEHLRHVGWRAFHIENYVNWCGHAQEIIPVPQPDGGVLLIPVLGEAT*
Ga0153915_1045221013300012931Freshwater WetlandsVPTYPCPRCGREVAARFRSFRVETLRHVGWSLFRLATYVKWCGHGQEILPAPLPDGRVTFVPVLGEAT*
Ga0137410_1150029213300012944Vadose Zone SoilMHCLPAEHGRPIPTYPCPRCGLEVASRFKDFRVENLKHVGRQLFRAATYVNWCGHGQEVSPLRLAYGRMAFVPVLGEAR*
Ga0137403_1135360023300015264Vadose Zone SoilHPYYPCPRTGRSPRGSGASRVEHLRHVGWQLFRAETYVNWCGHGQEVIPVPRADGLVAFVPVLGDASRASPHFRSV*
Ga0187778_1018936413300017961Tropical PeatlandMAAPYALDEHGRRMPTYPCPRPGCGREVPVRFTGFRVEYLRHVGWELFRVESFVNWCGHHQEVIPWPRRDGLVAFVPVLGEAT
Ga0187777_1020789323300017974Tropical PeatlandMPGPYALDEQGRRMPTYPCPRPGCGREVPVRFTGFRVEYLRHVGWELFRVESFVNWCGHHQEVIPWPRRDGLVAFVPVLGEAT
Ga0184610_100265413300017997Groundwater SedimentMPTYPCPRCDPEVASRFKGFRVEHLRHVGWSLFQPATYVNWCGHGQDIIPMPLADGRVTFVPVLGEAR
Ga0187766_1036934123300018058Tropical PeatlandMPGPYALDEQGRRMPTYPCPRPGCGREVPVRFTGFRVQYLRHVGWELFRAESFVNWCGHTQEVIPVPRPDGMVGFIPVLGEVR
Ga0184637_1061221123300018063Groundwater SedimentMVPPRWPDEEGRPLPTYPCPRCGRGVAVRFSGFRVEHRHVGWQLFRAETYVNWCGHGQEVIPMPLTDGRVTFVPVLGEAS
Ga0210399_1026204013300020581SoilVPFLRYPPVVASPFSLDEQGQPKPTYPCPRPGCRREVPVRFKGFRVEHLKHVGWEAYRVESYVNWCGHKREVIPVPREDGL
Ga0210404_1000814533300021088SoilVPFLRYPPVVASPFSLDEQGQPKPTYPCPRPGCRREVPVRFKGFRVEHLKHVGWEAYRVESYVNWCGHKREVIPVPREDGLVAFVPALGEAR
Ga0210408_1081757823300021178SoilMAAPFSLDEQGQPMPTYPCPRPGCGREVPMRFKGFRVEHLKHVGWEAYRVESYVNWCGHKREVIPVPREDGLVAFVPALGEAR
Ga0210384_10013280143300021432SoilMPTYPCPRPGCGRQVPVRFKGFRVEHLQHVGWEAYRVESYVNWCGHTQEVIPWPRPDGLVAFVPVLGEAR
Ga0210384_1087240613300021432SoilPPRWPDEQGRPIPTYPCSRCGREVAVRFRGFRVENLKHVGWQAYRVETYVNWCGHGQEIIPFPLPDGRVTFVPVLGEAR
Ga0210384_1157420713300021432SoilSSPSGISRGPSCPYCVTIPDMVPPRWPDEQGRPLPTYPCSRCGRGVAVRFRGFRVENLKHVGWQAYRVETYVNWCGHGQEIIPFPLPDGRVTFVPVLGEAR
Ga0207643_1000880743300025908Miscanthus RhizosphereMVPAWWPDERGKPIATYPCPRCGREVASRFRGFRVEPLSHVGWSLFRASSYINWCGHAQEVIPVPMRHGRVSFVPVLGETR
Ga0207684_10007953113300025910Corn, Switchgrass And Miscanthus RhizosphereMVPPIWPDEHGRPLPTYPCPPPGCGREVAVRFRGFRVEHLKHVGWQLFRAETYVNWCGHGQEVIPVPRRDGLVALVPVLGESS
Ga0207684_1013468323300025910Corn, Switchgrass And Miscanthus RhizosphereMRASVAGVVFWSLSGRALSALRSFVMVPPRWPDEQGRPIPTYPCVRCGLEVASRFRGFRVENLEHVGWRLFQPTSYVNWCGHAQEIIPVPLADGRVTFVPVLGEAR
Ga0207684_1019598543300025910Corn, Switchgrass And Miscanthus RhizosphereVTLPLLRYPPAMVPPRWPNEQGRLIPTYPCPRCGREVASRFRGFRVEHLRHVGWQLFTSATYVNWCGHGQEIIPFPLPDGRVTFVPVLGEAH
Ga0207684_1023098123300025910Corn, Switchgrass And Miscanthus RhizosphereMQRASLPLLRCDLAMVPPRWPDEHGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQPFRAETYVNWCGHGQEVIPLPLPDGRVTFVPVLGEAR
Ga0207684_1173810613300025910Corn, Switchgrass And Miscanthus RhizosphereMTTPAMIPGQWPRPAGHEHGRPIPTYPCPRCGLEVASRFRGFRVENLRHVWWQLFRAETYVNWCGHAQEVIPLPLADGR
Ga0207646_1002853823300025922Corn, Switchgrass And Miscanthus RhizosphereMLRPSMAIWLDEQGRPLPTYPCPRPGCGREVPVRFRGFRVEHLRHVGWQAYRVESYVNWCGHAQEVIPFPRPDWPVEFVPVLGEAT
Ga0207646_1003030533300025922Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRLIPTYPCPRCGREVASRFRGFRVENLKGLGWGLFQPTSYVNWCGHAQEIIPMPLADGRVTFVPVLGEAR
Ga0207646_1004824823300025922Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPAEHGRALPTYPCPPCGREVAARFRDFRVEHLAYVGWQVYRVASYVNWCGHGQEIIPFPLSDGPVRFVPLVGEAW
Ga0207646_1038158223300025922Corn, Switchgrass And Miscanthus RhizosphereMVPPRWPDEQGRPISTYPCPRCGLEVASRFRGFRVDNLRHVGWQVFRAETYVNWCGHAQEIIPLPLPDGRVTFVPVLGEAR
Ga0209438_107714723300026285Grasslands SoilLPLLRYHPAMVPPRWPDEQGRPLPTYPCPRCGRETPVRFKGFRVEHLKHVGWQLYRPETYVSWCGHGQEVIPVPLADRRVTFVPVLGEAR
Ga0257162_101287113300026340SoilMVPPRWPDEQGRPLPTYPCPRCGREVAVRFKGFRVEHLKHVGWQLFRAETYVNWCGHGQEVIPLPLPDGRVTFVPVLWEAR
Ga0257166_100011553300026358SoilMVPPRWPDEQGRPLPTYPCPRCGRETPVRFKGFRVEHLKHVGWQLYRPETYVSWCGHGQEVIPVPLADRRVTFVPVLGEAR
Ga0257179_104071223300026371SoilMIPPRWPDEQGRPIPTYACPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHAQEIIPLPLPDGRVTFVPVLVEAT
Ga0257172_101323843300026482SoilMHCLPDEHGRPIPTYPCPRCGLEVASRFKDFRVENLKHVGRQLFRIETYVNGCGHGQPLLLAYGRMAFVPVLGEAR
Ga0257165_102668423300026507SoilMIPPRWPDEQGRPIPTYPCPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHAQEIIPLPLPDGRVTFVPVLVEAT
Ga0257168_100016323300026514SoilMPTYPCSRCGREVAARFRGFRVENLKHVGWQAYRVETYVNWCGHGQEIIPFPLPDGRVTFVPVLGEAR
Ga0257158_101729413300026515SoilMVPPRWPDEQGRSISTYPCPRSGLEVASRFRGFRVENLRHVGWQLFMPATYVNWCGHGQEIIPLPL
Ga0209648_1003468333300026551Grasslands SoilMVPPRWPDEQGRPIPTYPCPRCGRKVASRFRGFRVEHLRHVGWQLFMPATYVNWCGHGQEIIPFPLPDGRVTFVPVVGEAR
Ga0209648_1008994843300026551Grasslands SoilMVPPRWPDEQGRPIPTYPSPRCGLEVASRFRGFRVENLKHMGWQLFRAETYVNRCGHGQEVIPLPLADGRVTFVPVLGEAN
Ga0209648_1016742543300026551Grasslands SoilMTTPWVDAQGRPLPTYPCPRPGCGREVPVRFRGFRVEHLRHLGWQAYRVESYVNWCGHGQEVIPFPRADGLVELVPVLGEAT
Ga0209648_1031773213300026551Grasslands SoilRRSGPTSRGQPLPTYRCPRCGREVAVRFRGFRVEHLKHVGWKAYRVETYVNWCGHGQEVIPVPRADGLIAFVPVLGETR
Ga0209331_112028823300027603Forest SoilIVTPNNMRMFAQRAYEQGRPLPTYPCPRPGCGREVAVLFRGFRVEHLKHVGWQAYRVETYVNGCGHGQEVIPVPRPDGLVEFVPVLWAAT
Ga0209388_109618223300027655Vadose Zone SoilMHCLPDEHGRPIPTYPCPRCGLEVASRFKDFRVENLKHVGRQLFRIETYVNGCGHEQAVSPLLLAYGRMAFVPVLGEAR
Ga0209588_101602033300027671Vadose Zone SoilMVPPRWPDEQGRPIPTYPCPRCGRKVASRFRGFRVEHLRHVGWQLFMPATYVTWCGHGQEVIPVPLPDGRVTFVPVLGEAN
Ga0209069_1034571623300027915WatershedsMVPPRWPDEQGRPIPPYPCPRCGLEVASRFRGFRVESLRHVGWQFFMPATYVNWCGHGQEIIIPFPLPDNRVTFVPVLGEVR
Ga0209526_1022404923300028047Forest SoilMPSPMVPPRWPDEQGRQLPTYPCPRCDREVAARFRGFRVAHLRHVGWQAYRIERYVNWCGHAQGVIPFPLPDGRVTFVPVLGEAR
Ga0209526_1024634723300028047Forest SoilMVPSRWPDEQGRPIPTYACPRCGLEVASRFRGFRVENLRRVGWQAYRVETYVNWCGHAQEIIPFPLPDGRATSVPGGAVAWWAELA
Ga0137415_1002990063300028536Vadose Zone SoilMPTYPCPRCGREVASRFSGFRVEHLRHVGWQLFRAETYVNWCEHGQEVIPEPLSDGRVTFVPVLGEAR
Ga0222749_1084746813300029636SoilPVDGPPLSLDEQGQPMPTYPCPRPGCGRQVPVRFKGFRVEHLQHVGWEAYRVESYVNWCGHTQEVIPWPRPDGLVAFVPVLGEAR
Ga0307473_1003411623300031820Hardwood Forest SoilMVPPRWPNEQGRLIPTYPCPRCGREVASRFRGFRVEHLRHVGWQLFTSATYVNWCGHGQEIIPFPLPDGRVTFVPVLGEAH
Ga0307473_1028551013300031820Hardwood Forest SoilMVPPRWPDEQGRPLPTYPCPRCGRETPVWFKGFRVEHLKHVGWQLYRPETYVSWCGHGQEVIPVPLADGRVTFVPVLGEAR
Ga0307471_10052626813300032180Hardwood Forest SoilMVPPRWPGEQGRPIPTYPRPRCGLEVASRFRGFRVENLRHVGWQLFRAETYVNWCGHGQEVIPLPLPDGRVTFVPVLGEAK
Ga0307471_10068218633300032180Hardwood Forest SoilMPTYPCPRPGCGPEVPVRFEGFRVEHLKHVGWEAYRVESYVNGCGQAPEMILLPRPDGLVAFVPVLGEARYGQLN
Ga0307471_10328207713300032180Hardwood Forest SoilMVPPRWPDEQGRPIPTYHCPRCGLVVASRFRGFRVENLRHVGWQLFRAETYVNWCGHGQEIIPFPLRDG
Ga0335082_1000595843300032782SoilLPLLRYHSAMVLPYWPDEQGRPRPTYARPRRGREVPVRFRVEHLRHVGWRPFNAVSHVSWCGHGQEATPISLAAAGRVTFVPGLGEAR
Ga0335082_1171018813300032782SoilMVPPRWPDEQGRPLPTYPCPRCGREVAVRFRGFRVEHLRHVGWRLFSAATYVNWCGHGQEVIPVPLADGRVTFVPVLGEAI
Ga0335069_1044540023300032893SoilMVLPYWPDEQGRPRPTYARPRRGREVPVRFRVEHLRHVGWRPFNAVSHVSWCGHGQEATPISLAAAGRVTFVPGLGEAR
Ga0373959_0015450_1195_14013300034820Rhizosphere SoilIATYPCPRCGREVASRFRGFRVEPLSHVGWSLFRASSYINWCGHAQEVIPVPMRHGRVSFVPVLGETR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.