NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F075129

Metagenome / Metatranscriptome Family F075129

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075129
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 61 residues
Representative Sequence MKHSAEYERFTALVDRVLAVPHSVIKQRVEEHRKRAALNPNRPGPKPKRKAVKPSASGRAAKS
Number of Associated Samples 101
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.86 %
% of genes near scaffold ends (potentially truncated) 18.49 %
% of genes from short scaffolds (< 2000 bps) 63.03 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (81.513 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(5.882 % of family members)
Environment Ontology (ENVO) Unclassified
(18.487 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.378 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.97%    β-sheet: 0.00%    Coil/Unstructured: 67.03%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF12762DDE_Tnp_IS1595 52.94
PF10592AIPR 5.88
PF01844HNH 5.88
PF03235DUF262 3.36
PF07510DUF1524 2.52
PF12686DUF3800 1.68
PF04237YjbR 1.68
PF01597GCV_H 0.84
PF02283CobU 0.84
PF14706Tnp_DNA_bind 0.84
PF07859Abhydrolase_3 0.84
PF04608PgpA 0.84
PF08545ACP_syn_III 0.84
PF13586DDE_Tnp_1_2 0.84
PF12728HTH_17 0.84
PF08327AHSA1 0.84
PF00669Flagellin_N 0.84
PF13541ChlI 0.84
PF01695IstB_IS21 0.84
PF13683rve_3 0.84
PF12704MacB_PCD 0.84
PF08241Methyltransf_11 0.84
PF14310Fn3-like 0.84
PF15902Sortilin-Vps10 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG1479DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domainsDefense mechanisms [V] 3.36
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 1.68
COG0509Glycine cleavage system protein H (lipoate-binding)Amino acid transport and metabolism [E] 0.84
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 0.84
COG1267Phosphatidylglycerophosphatase ALipid transport and metabolism [I] 0.84
COG1344Flagellin and related hook-associated protein FlgLCell motility [N] 0.84
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 0.84
COG2087Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferaseCoenzyme transport and metabolism [H] 0.84

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms82.35 %
UnclassifiedrootN/A17.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459010|GIO7OMY01CP01OAll Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13521Open in IMG/M
3300002104|C687J26621_10033236All Organisms → cellular organisms → Bacteria → Acidobacteria2013Open in IMG/M
3300004092|Ga0062389_100644672All Organisms → cellular organisms → Bacteria1227Open in IMG/M
3300004463|Ga0063356_104721050All Organisms → cellular organisms → Bacteria → Proteobacteria586Open in IMG/M
3300004635|Ga0062388_101197904All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300005180|Ga0066685_10484529All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300005332|Ga0066388_101643497All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300005335|Ga0070666_10231752Not Available1304Open in IMG/M
3300005438|Ga0070701_11003685All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300005440|Ga0070705_100704483All Organisms → cellular organisms → Bacteria → Acidobacteria793Open in IMG/M
3300005458|Ga0070681_10017487All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia7167Open in IMG/M
3300005458|Ga0070681_10035766All Organisms → cellular organisms → Bacteria → Acidobacteria4989Open in IMG/M
3300005518|Ga0070699_100151055All Organisms → cellular organisms → Bacteria2054Open in IMG/M
3300005524|Ga0070737_10031809All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA133261Open in IMG/M
3300005534|Ga0070735_10049738All Organisms → cellular organisms → Bacteria2780Open in IMG/M
3300005540|Ga0066697_10833984All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium500Open in IMG/M
3300005541|Ga0070733_10741796All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae659Open in IMG/M
3300005548|Ga0070665_100028066All Organisms → cellular organisms → Bacteria5669Open in IMG/M
3300005764|Ga0066903_108396852All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13527Open in IMG/M
3300005836|Ga0074470_11742032All Organisms → cellular organisms → Bacteria13421Open in IMG/M
3300005843|Ga0068860_100706296All Organisms → Viruses → Predicted Viral1018Open in IMG/M
3300006059|Ga0075017_100084219Not Available2193Open in IMG/M
3300006059|Ga0075017_100183884All Organisms → cellular organisms → Bacteria1504Open in IMG/M
3300006059|Ga0075017_100609915All Organisms → cellular organisms → Bacteria → Acidobacteria835Open in IMG/M
3300006162|Ga0075030_100561598All Organisms → cellular organisms → Bacteria → Acidobacteria906Open in IMG/M
3300006176|Ga0070765_100310087All Organisms → cellular organisms → Bacteria1460Open in IMG/M
3300006638|Ga0075522_10005714All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8740Open in IMG/M
3300006638|Ga0075522_10024197All Organisms → cellular organisms → Bacteria3772Open in IMG/M
3300006800|Ga0066660_11486523Not Available533Open in IMG/M
3300006893|Ga0073928_10122426All Organisms → cellular organisms → Bacteria → Acidobacteria2141Open in IMG/M
3300007628|Ga0102937_1313177Not Available619Open in IMG/M
3300009038|Ga0099829_11436350All Organisms → cellular organisms → Bacteria → Acidobacteria570Open in IMG/M
3300009098|Ga0105245_12333239All Organisms → cellular organisms → Bacteria → Proteobacteria589Open in IMG/M
3300009098|Ga0105245_12536536All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300009137|Ga0066709_102867492All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300009137|Ga0066709_103015613All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300009176|Ga0105242_10200192All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1774Open in IMG/M
3300009176|Ga0105242_10269245All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium1542Open in IMG/M
3300009400|Ga0116854_1115623All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300009510|Ga0116230_10439350All Organisms → cellular organisms → Bacteria → Acidobacteria1009Open in IMG/M
3300009545|Ga0105237_11660103All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300009551|Ga0105238_11505965Not Available701Open in IMG/M
3300009621|Ga0116116_1070568All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300009633|Ga0116129_1001091All Organisms → cellular organisms → Bacteria15488Open in IMG/M
3300009645|Ga0116106_1248235Not Available566Open in IMG/M
3300009700|Ga0116217_10165476Not Available1469Open in IMG/M
3300009701|Ga0116228_10049379All Organisms → cellular organisms → Bacteria3368Open in IMG/M
3300009787|Ga0116226_10314467All Organisms → cellular organisms → Bacteria → Acidobacteria1612Open in IMG/M
3300009868|Ga0130016_10050928All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia4336Open in IMG/M
3300010379|Ga0136449_100017246Not Available18850Open in IMG/M
3300010379|Ga0136449_101103833Not Available1262Open in IMG/M
3300010857|Ga0126354_1166598Not Available1491Open in IMG/M
3300010861|Ga0126349_1244405All Organisms → cellular organisms → Bacteria → Acidobacteria726Open in IMG/M
3300011003|Ga0138514_100042239All Organisms → cellular organisms → Bacteria → Acidobacteria900Open in IMG/M
3300012005|Ga0120161_1035915All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1624Open in IMG/M
3300012211|Ga0137377_11653691Not Available563Open in IMG/M
3300012680|Ga0136612_10410762All Organisms → cellular organisms → Bacteria → Acidobacteria686Open in IMG/M
3300013296|Ga0157374_11524767All Organisms → cellular organisms → Bacteria → Acidobacteria692Open in IMG/M
3300013307|Ga0157372_12084867All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria652Open in IMG/M
3300014155|Ga0181524_10119598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1425Open in IMG/M
3300014325|Ga0163163_10278522All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1724Open in IMG/M
3300014489|Ga0182018_10263569All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium945Open in IMG/M
3300014492|Ga0182013_10209357All Organisms → cellular organisms → Bacteria → Acidobacteria1164Open in IMG/M
3300014494|Ga0182017_10136344All Organisms → cellular organisms → Bacteria1593Open in IMG/M
3300014495|Ga0182015_10727313Not Available625Open in IMG/M
3300014499|Ga0182012_10658506All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans670Open in IMG/M
3300014501|Ga0182024_10010750All Organisms → cellular organisms → Bacteria18594Open in IMG/M
3300017941|Ga0187850_10001003All Organisms → cellular organisms → Bacteria → Acidobacteria33070Open in IMG/M
3300017946|Ga0187879_10025732All Organisms → cellular organisms → Bacteria3596Open in IMG/M
3300017970|Ga0187783_10157916All Organisms → cellular organisms → Bacteria1670Open in IMG/M
3300017988|Ga0181520_10017860All Organisms → cellular organisms → Bacteria → Acidobacteria8377Open in IMG/M
3300018037|Ga0187883_10048629All Organisms → cellular organisms → Bacteria → Acidobacteria2250Open in IMG/M
3300018038|Ga0187855_10850577All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium532Open in IMG/M
3300018062|Ga0187784_10534141All Organisms → cellular organisms → Bacteria → Acidobacteria944Open in IMG/M
3300020193|Ga0194131_10004096All Organisms → cellular organisms → Bacteria → Acidobacteria22293Open in IMG/M
3300020193|Ga0194131_10050846All Organisms → cellular organisms → Bacteria2800Open in IMG/M
3300020200|Ga0194121_10300092All Organisms → cellular organisms → Bacteria → Acidobacteria819Open in IMG/M
3300020221|Ga0194127_10416315All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300020583|Ga0210401_10000572All Organisms → cellular organisms → Bacteria → Acidobacteria44750Open in IMG/M
3300020603|Ga0194126_10659397All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300020603|Ga0194126_10740203Not Available568Open in IMG/M
3300021181|Ga0210388_10052999All Organisms → cellular organisms → Bacteria → Acidobacteria3386Open in IMG/M
3300021420|Ga0210394_11375473All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300024232|Ga0247664_1000086All Organisms → cellular organisms → Bacteria23176Open in IMG/M
3300025463|Ga0208193_1004256All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5224Open in IMG/M
3300025627|Ga0208220_1000059All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae39351Open in IMG/M
3300025862|Ga0209483_1008138All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6109Open in IMG/M
3300025862|Ga0209483_1014744All Organisms → cellular organisms → Bacteria4201Open in IMG/M
3300025912|Ga0207707_10028278All Organisms → cellular organisms → Bacteria → Acidobacteria4901Open in IMG/M
3300025912|Ga0207707_10035882All Organisms → cellular organisms → Bacteria4335Open in IMG/M
3300025949|Ga0207667_11626685Not Available614Open in IMG/M
3300027867|Ga0209167_10464584All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae692Open in IMG/M
3300027908|Ga0209006_10013840All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7311Open in IMG/M
3300027965|Ga0209062_1027023All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA133245Open in IMG/M
3300027986|Ga0209168_10052447All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2177Open in IMG/M
3300028906|Ga0308309_10442106Not Available1119Open in IMG/M
3300029910|Ga0311369_10390029All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300031057|Ga0170834_112498983All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300031241|Ga0265325_10531343Not Available509Open in IMG/M
3300031261|Ga0302140_10820358Not Available662Open in IMG/M
3300031670|Ga0307374_10055766All Organisms → cellular organisms → Bacteria3998Open in IMG/M
3300031708|Ga0310686_107081622All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4699Open in IMG/M
3300031708|Ga0310686_107177723All Organisms → cellular organisms → Bacteria → Acidobacteria10088Open in IMG/M
3300031708|Ga0310686_108792543All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300031708|Ga0310686_113865320All Organisms → cellular organisms → Bacteria → Acidobacteria3731Open in IMG/M
3300031708|Ga0310686_117655486All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300031708|Ga0310686_117851841Not Available1036Open in IMG/M
3300031788|Ga0302319_11171857Not Available713Open in IMG/M
3300032118|Ga0315277_10512601All Organisms → cellular organisms → Bacteria1199Open in IMG/M
3300032160|Ga0311301_10028597Not Available14689Open in IMG/M
3300032160|Ga0311301_10322757All Organisms → cellular organisms → Bacteria2447Open in IMG/M
3300032162|Ga0272424_1008123All Organisms → cellular organisms → Bacteria → Acidobacteria14798Open in IMG/M
3300032892|Ga0335081_10447572All Organisms → cellular organisms → Bacteria1644Open in IMG/M
3300032895|Ga0335074_10021316All Organisms → cellular organisms → Bacteria9140Open in IMG/M
3300033402|Ga0326728_10000037All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia533640Open in IMG/M
3300033407|Ga0214472_10829211All Organisms → cellular organisms → Bacteria → Acidobacteria830Open in IMG/M
3300033755|Ga0371489_0146870All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium1290Open in IMG/M
3300034091|Ga0326724_0652155All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13517Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.88%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake5.04%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil5.04%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.20%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil4.20%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.36%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.36%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.36%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.52%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.52%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.52%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated2.52%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.68%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.68%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.68%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.68%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.68%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.68%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.68%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.68%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.84%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.84%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.84%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.84%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.84%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.84%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.84%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.84%
Pond SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Pond Soil0.84%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.84%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.84%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.84%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.84%
RockEnvironmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock0.84%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.84%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.84%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
3300002104Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005524Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007628Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_B_D1_MGEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009400Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858EnvironmentalOpen in IMG/M
3300009510Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009621Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150EnvironmentalOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009701Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009787Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009868Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plantEngineeredOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010857Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300012005Permafrost microbial communities from Nunavut, Canada - A15_80cm_0MEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012680Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020193Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120mEnvironmentalOpen in IMG/M
3300020200Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50mEnvironmentalOpen in IMG/M
3300020221Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100mEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300020603Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150mEnvironmentalOpen in IMG/M
3300021067Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13CEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300025463Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025627Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025862Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027965Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031261Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1EnvironmentalOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032162Rock endolithic microbial communities from Victoria Land, Antarctica - Pudding Butte nordEnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033755Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fractionEnvironmentalOpen in IMG/M
3300034091Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00NEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_062827502170459010Grass SoilMLEVGMKYEPNEFDRFTSLVDRVLAVPHSVIKQRIEEHRKQAALNPNRRGPKPKQKAVKPSASD
C687J26621_1003323623300002104GroundwaterMAKAKRSHEYDAFTELVDRVLAVPNSVIKGRVEKHRKRAALNPNRPGPKKSGKPLKL*
Ga0062389_10064467223300004092Bog Forest SoilMDTKHPNEYDTFTSLVDRVLAVPHSVILQRVKEHRDQTALNPSKPGPKPKRKRRSTKPSA
Ga0063356_10472105023300004463Arabidopsis Thaliana RhizosphereMKDSAEYERFTDLVDRVLAVPHSVIKQRVEQDRQRIAANPNRPGPKTKQKATKPSASDHA
Ga0062388_10119790423300004635Bog Forest SoilMAHSEEYIRFTALVDRVIAVPHSVIKQRVEEHRKQAASNPNRRGPKVKPKGVKPSASAPEVTDQQR*
Ga0066685_1048452923300005180SoilMKHSDEYNRFTNLVDRVLAVPHSVIKERVKEHRRRAALNPSKPGPKPGTKPKRKAVKPFASGRETSR*
Ga0066388_10164349723300005332Tropical Forest SoilMKHSVEYERFTALVDRVLAVPHGVIKKRVEEHRKQAAANPNRRGPKPKQKALKPSASDPEATS*
Ga0070666_1023175213300005335Switchgrass RhizosphereVKHQTEFEAFTSLVDRVLAVPHSVIKQRVEVERERIAADPNRPGPKPKRKRKAVKPSA*
Ga0070701_1100368513300005438Corn, Switchgrass And Miscanthus RhizosphereMGVVMKYEPTEYDRFTSLVDRVLAVPHSVIKERVEKERKLAAANPNRPGPKPKRKVKTSVSGRASKY*
Ga0070705_10070448313300005440Corn, Switchgrass And Miscanthus RhizosphereMKHSSEYDAFTSLVDRVLAVPHSVIKERVEEHRKQAAVNPYRRGPKSNKKKQKAVRPSAS
Ga0070681_1001748763300005458Corn RhizosphereMKHSAEYERFTALVDRVIAVPHSVIKQRVEEHRKRAALNPNRPGPKPKRKAIKPSASDRAAKS*
Ga0070681_1003576673300005458Corn RhizosphereVKHSQEFDAFTSLVDRVLAVPHSVIKQRVEAERKRIAADPNRPGPKTKRKRKAVKSSA*
Ga0070699_10015105513300005518Corn, Switchgrass And Miscanthus RhizosphereMKIMKSEPQLSEYDAFTNIVDRVLSVPHDVIKRRVEAERKRIAANPNRPGPKPKRKKLKPSA*
Ga0070737_1003180933300005524Surface SoilMKHSVEYERFTALVDRVLAVPHSVIKHRVEEQRKRADQNPSKPGPKPKLKTKVNPSTSAHGASPGR*
Ga0070735_1004973823300005534Surface SoilMKHSAEYERFTALVNRVLAVPHSVIKQRVEEHRKQAALNPNRPGPKPKRKAVKPSASDPEASGH*
Ga0066697_1083398423300005540SoilWQAMKHSAEYERFTSLVDRVLAVPHRVIKERVEEHRKRTALNPSKPGPKPGTKRKRKAVKPSASAHETSR*
Ga0070733_1074179623300005541Surface SoilMKHSTEYNRFTSLVDRVLAVPHSIIKQRVEEHRRQAAKNPNRPGPKPKRKVKPSASAPGASR*
Ga0070665_10002806623300005548Switchgrass RhizosphereLPVKHQTEFEAFTSLVDRVLAVPHSVIKQRVEVERERIAADPNRPGPKPKRKRKAVKPSA
Ga0066903_10839685213300005764Tropical Forest SoilMKHSDEYERFTDLVDRVLAVPHSIIKERVEEHRRQAELNPSKPGPKRGWKPKRKV
Ga0074470_1174203283300005836Sediment (Intertidal)MKYEPTEYDKFTALVDRVLAVPHSVIKQRVEEHRKHAANNPNRPGPKPKAKVKPSASGHASKN*
Ga0068860_10070629623300005843Switchgrass RhizosphereLLVWRKLVSNKSSEYEAFTNVVDRVLSVPHDVLKRRIEEERKRIAANPNRPGPKPKRKKLKPSA*
Ga0075017_10008421943300006059WatershedsMKHSAEFERFTALVDRVLSVPHSTVKERIEQHRKQAAQNPNRRGPKPKQKVSTSASDHEAKS*
Ga0075017_10018388423300006059WatershedsMKYEPSEYDKFTSLVDRVLSVPHSVIKERVEEHRKQAALNPNRPGPKPKRKVKKPSA*
Ga0075017_10060991523300006059WatershedsIVKHSQEFDAFTSLVDRVLAVPHSVIKQRVDEHKKQAAMNPNRRGPKPKIKSSSDRAAKS
Ga0075030_10056159813300006162WatershedsYEPSEYDKFTSLVDRVLSVPHSVIKERVEEHRKQAALNPNRPGPKPKRKVKKPSA*
Ga0070765_10031008723300006176SoilMKHSEEFERFTALVDRVLAVPHDVIKQRVEEHRRKAAQNPNRPGPKPKRKATKPSA*
Ga0075522_1000571453300006638Arctic Peat SoilMGVKMKYEPSEFDNFTALVDRVLAVPHAVIKKRVEEHREQAASNPNRPGPKPKAKVKSSASGRVAKN*
Ga0075522_1002419743300006638Arctic Peat SoilMKHSVEYERFTDLVDRVLAVPHAVIKQRVEEHRKQAALNPNRPGPKPKRKRKAVKPSA*
Ga0066660_1148652323300006800SoilMKHSAEYERFTELVDRVLAVPHSVIKARIEEHRKQAALNPNRPGPKPKRKAVKSSASDPGANGH
Ga0073928_1012242623300006893Iron-Sulfur Acid SpringMKHSAEYDAFTNLVDRVLAVPHSVIKQRVEEHRKQADKNPSKPGPKPKLRRKTTKPSA*
Ga0102937_131317713300007628Pond SoilMNSTVPSEFANFDALVRKVLAVPAETIKARVEEHRERAARNPNRPGPKPKKVKPSASGRASRDQD*
Ga0099829_1143635023300009038Vadose Zone SoilMKHSAEYKRFTALVDRVLAVPHSVIKQRVEEHRKQAALNPNRPGPKPKRKAVKPSASDHGANR*
Ga0105245_1233323913300009098Miscanthus RhizosphereMKHSAEYERFTDLVDRVLAVPHAVIKQRVEEHRKQAALNPNRPGPKPKRKRKAVKP
Ga0105245_1253653623300009098Miscanthus RhizosphereMKHSAEYERFTALVDRVLAVPHSVIKQRVEEHRKRAALNPNRPGPKPKRKAVKPSASGRAAKS*
Ga0066709_10286749223300009137Grasslands SoilVKHSAEYKRFTRLVDQVLSVPHSVIKQRMEEYKKQVAQNPKRRGPKRKPTKPSASAREVNERH*
Ga0066709_10301561323300009137Grasslands SoilMKHSVEYERFTSLVDRVLSVPHSVIKERVEEHRNQAAQNPNRRGPKPGRKRIKPSASAHDATPKR*
Ga0105242_1020019223300009176Miscanthus RhizosphereMKPGPTEFAKFTTLVDRVLAVPHSIIQQRVEEHRKQAAQNPNRPGPKPKKKRKAVKPSVS
Ga0105242_1026924533300009176Miscanthus RhizosphereMKNSTEFDAFTSLVDRVLAVPHSVIKQRVDEHRKKAALNPNRPGPKPKTKRKAVKPSVS*
Ga0116854_111562323300009400SoilMTHSTEYERFTDLVDRVLSVPHSVIKQRIEEERKQSAQKPIRPGPKPKRKVK
Ga0116230_1043935023300009510Host-AssociatedMKHSKEYDRFTALVDRVIAVPHSVIKERVEEHRKQVANNPNRRGPKAKQPAVKPSALAPEATGQQH*
Ga0105237_1166010323300009545Corn RhizosphereEYDAFTNLVDRVLAVPHSVIKQRVEEHRRQAALNPNRPGPKPKQKRKAVKPSAS*
Ga0105238_1150596523300009551Corn RhizosphereMMKYEPTEYDAFTSLVDRVLAVPHSVIKQRVEEHRKQAALNPNRPGPKPKKKRKAVKPSVS*
Ga0116116_107056813300009621PeatlandMKHSVEYERFTALVDRVIAVPHSVIKQRVEEHRRRSAQNPNRPGPKRKAIKPSASDPEAGGH*
Ga0116129_100109193300009633PeatlandMKHSAEYQAFTNLVDRVLAVPHNVIQQRVEEHRRKAALNPNRPGPKPKKKAVKPSSSDRALRD*
Ga0116106_124823513300009645PeatlandLQMKHSAQYERFTALVDRVMSVPHSVIKQRVDEHRRQAALNPNRPGPKPKRKAIKPTASGL*
Ga0116217_1016547633300009700Peatlands SoilMVAMKRSTEFDAFTSLVDRVIAVPHEVIKQRVDEHRRQVANNPSKPGPKPKRKALKP
Ga0116228_1004937943300009701Host-AssociatedMAHSAEYERFTALVERVLAVPHSVIKQRVEERRKQTASNPNRRGPKPKQKAVKPSASAPEANDQQH*
Ga0116226_1031446723300009787Host-AssociatedMKHSEEYDRFTALVDRVIAVPHSVIKQRVEDHRKIAANNPNRPGPKPKQKAVKPSASVPGEDDQQR*
Ga0130016_1005092823300009868WastewaterVKHSAEYERFTDLVDRVLAVSHSVIKERVEEHRRRAAENPNRPGPKPKRKVKTSASDHGANGHG*
Ga0136449_10001724623300010379Peatlands SoilMVAMKRSTEFDAFTSLVDRVIAVPHEVIKQRVDEHRRQVANNPSKPGPKPKRKALKPSV*
Ga0136449_10110383323300010379Peatlands SoilMKYEPTEYDRFTSLVDRVLAVPHSLIKQRVEEHRKQAANNPNRPGPKPKGKLKTSASGRAAKN*
Ga0126354_116659823300010857Boreal Forest SoilMKHSTEFDAFTKLVDRVLAVPRSVIQERVEEHRKHVDANPNRRGPKRKAKPSASDHDSNGHS*
Ga0126349_124440523300010861Boreal Forest SoilMMKDPEREYDAFTKLVDKVLAVPHSVIKQRVEEHQRRAAKNPNKRGPKPKTSARASNDRD
Ga0138514_10004223923300011003SoilMKHKSEEFESFTKLVDRVLAVPRSVIKGRVEEHKKHAAKNPNKRGPKPKTSARASNDRD*
Ga0120161_103591513300012005PermafrostMKHSAEYKRFTALVDRVISVPHSVIRQRVEEHRKQAAKNPNRPGPKPKRKAVKPSASVPEATDHD*
Ga0137377_1165369113300012211Vadose Zone SoilAEYNRFTTLVDRVLAVPHSVIKERVEEHRKQAALNPSKPGPKPGTKPKRKAVKPSASAREPNR*
Ga0136612_1041076223300012680Polar Desert SandVKHSPEFEAFTNLVDRVLAVPHSVIKERIEEHRKQADKNPNKRGPKRKTTKSSADPAANGQR*
Ga0157374_1152476723300013296Miscanthus RhizosphereMRHSQEFDAFTALVDRVLAVPHAVIKARVEEHRKQAALNPNRPGPKPKRKIKSSSSDRAAKN*
Ga0157372_1208486723300013307Corn RhizosphereMKHSAEYERFTALVDRVIAVPHSVIKQRVEEHRRRAALNPNRPGPKPKRKAVKPSASDRAAES*
Ga0181524_1011959823300014155BogMGVKMKYEPSEYDKFTSLVDRVLSVPHSVIKQRVEEHRKQAANNPNRPGPKPKAKLKASASVRAAKS*
Ga0163163_1027852223300014325Switchgrass RhizosphereMSREYEAFTTLVDRVLAVPHSVIKQRVEEHRKQAAQNPNRPGPKPKKKRKAVKPSVS*
Ga0182018_1026356913300014489PalsaMKHSVEYDRFTNLVDRVLAVPHSVLQQRIEEDRKRIDANPSKPGPKRKAKLKKPSA*
Ga0182013_1020935733300014492BogMVSRVKHSQEYEAFTSLVDRVLAVPHSVIKQRVEEHRKQAANNPNRPGPKPKQKRKAVKPSA*
Ga0182017_1013634423300014494FenMKSSVEYERFTALVDRVIAVPHSIIKQRVEEHRKQAAQNPHRRGPKPKQKAIKPSASDPEASGLG*
Ga0182015_1072731323300014495PalsaMKHSAEYNRFANFVDRVLAVPHSVMKQRIEEDRRRIDANPSKPGPKRKAKLKKPSA*
Ga0182012_1065850613300014499BogMKHSEEYDRFTALVDRVIAVPHSVIKQRVAAHRKESANNPNRRGPKPKAIKPSASAHEEDDQQR*
Ga0182024_1001075023300014501PermafrostMKQSAEYERFTALVDRVLAVPHSVIKQRVEEHRKQAALNPNRPGPKPKRKIKPRASARD*
Ga0187850_10001003163300017941PeatlandMKHSVEYERFTALVDRVIAVPHSVIKQRVEEHRRRSAQNPNRPGPKRKAIKPSASDPEAGGH
Ga0187879_1002573233300017946PeatlandMKHSAEYERFTALVDCVLSVPHSVIKERVEEHRRKAAQNPNRRGPKPKRKVVTPTTSDPEANRQG
Ga0187783_1015791623300017970Tropical PeatlandMKHSAEYERFTALVDRVLAVPHSVIQQRVEEHRRQAALNPNRPGPKPKKKTAIKRPSSSGHAKPSAAN
Ga0181520_1001786063300017988BogMKHSAEYERFTALGDQVLSVPHSVIKERVEEHRRQAALNPNRRGPKPKRKATPPAASDHGANGL
Ga0187883_1004862913300018037PeatlandMKHSAEYERFTALVDCVLSVPHSVIKERVEEHRRKAAQNPNRRGPKPKRKVVTPTTSDSEANRQG
Ga0187855_1085057723300018038PeatlandMTMKHSAEYERFTSLVDSVLAVPHSVIKERVEEHRKQSALNPNRPGPKPKRKNVTASASDLAAKS
Ga0187784_1053414113300018062Tropical PeatlandRFTGLVDRVIAVPHNVIKQRVEEHRKQAAQNPHRRGPKPKRKDIKPSASDHAATS
Ga0194131_1000409653300020193Freshwater LakeMKHSAEYEHFTALVDRVLAVPHSVIKERVEEHRRQAAKNPNRPGPKPKRKVNPSASDHEASGH
Ga0194131_1005084633300020193Freshwater LakeMKHSVEYERFTALVDHVLAVPHGVIKERIEEHRRQAAKNPNRRGPKPKRNVKPSASDPGASDR
Ga0194121_1030009213300020200Freshwater LakeAEYEHFTALVDRVLAVPHSVIKERVEEHRRQAAKNPNRPGPKPKRKVNPSASDHEASGH
Ga0194127_1041631523300020221Freshwater LakeMKHSVEYERFTALVDHVLAVPHGVIKERIEEHRRQAAKNPNRRGPKPKRNVKPSASDPG
Ga0210401_10000572173300020583SoilMKSEPKEYEAFNSLVDRILAVPHNVIKQRIEEHRKQAALNPHKPGPKRKRRTTKPSVS
Ga0194126_1065939723300020603Freshwater LakeMKHSVEYERFTALVDHVLAVPHGVIKERIEEHRRQAAKNPNRRGPKPKRNV
Ga0194126_1074020323300020603Freshwater LakeMKHSAEYEHFTALVDRVLAVPHSVIKERVEEHRRQAAKNPNRPGPKPKRKVNPSASDHEA
Ga0196978_1000022143300021067SoilMSDAPKPPREFDAFTEMVDRVLAVPHSVIKQRIEEHREQADKNPRKRGPKPKTKKPSASGRGSSGRA
Ga0210388_1005299943300021181SoilMKHSVEYERFTNLVDRVLAVPHSALKQRTEEDRKRIDANPSKPGPKRKAKPTKPSV
Ga0210394_1137547313300021420SoilMKYSAEYERFTALVDRVIAVPHSVIKERVEEHRKQAALNPNRPGPKPKRKAVKPSASLPESTDRP
Ga0247664_1000086453300024232SoilMKHSSEYEAFTSLVDRVLAVPHSVIKERVEQHRKQAALNPNRRGPKPKQKTVKPSVSDPGASAPR
Ga0208193_100425633300025463PeatlandMKHSAEYQAFTNLVDRVLAVPHNVIQQRVEEHRRKAALNPNRPGPKPKKKAVKPSSSDRALRD
Ga0208220_1000059293300025627Arctic Peat SoilMKHSAEYERFTAIVDQVLSVPHSVIKQRIEEHRKQAALNPNRRGPKPKRKTVMPSASDPEVNGH
Ga0209483_100813853300025862Arctic Peat SoilMGVKMKYEPSEFDNFTALVDRVLAVPHAVIKKRVEEHREQAASNPNRPGPKPKAKVKSSASGRVAKN
Ga0209483_101474443300025862Arctic Peat SoilMKHSVEYERFTDLVDRVLAVPHAVIKQRVEEHRKQAALNPNRPGPKPKRKRKAVKPSA
Ga0207707_1002827873300025912Corn RhizosphereVKHSQEFDAFTSLVDRVLAVPHSVIKQRVEAERKRIAADPNRPGPKTKRKRKAVKSSA
Ga0207707_1003588253300025912Corn RhizosphereMKHSAEYERFTALVDRVIAVPHSVIKQRVEEHRKRAALNPNRPGPKPKRKAIKPSASDRAAKS
Ga0207667_1162668513300025949Corn RhizosphereMKPPTEYDTFTLLVDRVLAVPHSVIKQRVEEHRRQSALNPNRPGPKPKTKK
Ga0209167_1046458423300027867Surface SoilMKHSTEYNRFTSLVDRVLAVPHSIIKQRVEEHRRQAAKNPNRPGPKPKRKVKPSASAPGASR
Ga0209006_1001384023300027908Forest SoilMKHSAEYERFTNLVDSVLAVPHSVIKQRLEEHRKQAATNPSKPGPKRKAPRLKKPSA
Ga0209062_102702333300027965Surface SoilMKHSVEYERFTALVDRVLAVPHSVIKHRVEEQRKRADQNPSKPGPKPKLKTKVNPSTSAHGASPGR
Ga0209168_1005244723300027986Surface SoilMKHSAEYERFTALVNRVLAVPHSVIKQRVEEHRKQAALNPNRPGPKPKRKAVKPSASDPEASGH
Ga0308309_1044210623300028906SoilMKHSEEFERFTALVDRVLAVPHDVIKQRVEEHRRKAAQNPNRPGPKPKRKATKPSA
Ga0311369_1039002923300029910PalsaMRHSEEYERFTALVDRVIAIPHSVIKQRVEEHRRQVSSNPNRRGPKSKQKAVKPSASAPEATDQQR
Ga0170834_11249898323300031057Forest SoilMKHSAEYEAFTSLVDRVLAVPHSVIKERVEQHRKQAALNPNRRGPKPKTVKPSASDHAATDPR
Ga0265325_1053134323300031241RhizosphereMKHSVEYERFTDLVDRVLAVPHAVIKQRVEEHRKQAALNPNRPGPKPKRKRKAIKPSA
Ga0302140_1082035813300031261BogKGGKCDTIKEVKHSAEFQAFDELVGKVLAVPHSVIKQRIEEERKLRPNRPGPKPKRKVTPSASDPGESGR
Ga0307374_1005576633300031670SoilMKHSAEYERFTSLVDRILSVPHDIIKQRIEEHRKEAANNPHRRGPKSKRKTIKSSASGREAKS
Ga0310686_10708162223300031708SoilMKHYAEYERFTSLVDRVLAVPRGVLKERIEEDRKRIDANPSKPGPKRKPKIRSKP
Ga0310686_10717772363300031708SoilMKHSAEYERFTDVVDRVLAVPRDVMKQRIEEDRKRIDANPSKPGPKRKSKPTKPSA
Ga0310686_10879254323300031708SoilMKHSEEYERFTAYVDRVLAVPHSVIKQRVEEERKQSAMKPVRPGPKPKGKVKPSSSGRAAKS
Ga0310686_11386532053300031708SoilMKHSAEYDRFTALVDRILAVPHSVIKQRVEEHREQAALNPNRPGPKPKKRKPLKPPAS
Ga0310686_11765548613300031708SoilLWSATMEPMKIVSPSEFDAFTSLVDRVLAVPHSVIKQRVEEHREQSLKNPNRPGPKPKIKLSASDPASKS
Ga0310686_11785184123300031708SoilMKHSEEYERFTAYVDRVLAVPHSVIKQRVEEERKVSAMKTVRPGPKPKKKAVKPPSSVRDSRESN
Ga0302319_1117185723300031788BogVKHSAEFQAFDELVGKVLAVPHSVIKQRIEEERKLRPNRPGPKPKRKVTPSASDPGESGR
Ga0315277_1051260123300032118SedimentMKHSPQYERFTDLVDRVLAVPHSVIKRRVQEHRKQAAQNPNRRGPKAKTKPSALARGGIG
Ga0311301_10028597223300032160Peatlands SoilMVAMKRSTEFDAFTSLVDRVIAVPHEVIKQRVDEHRRQVANNPSKPGPKPKRKALKPSV
Ga0311301_1032275723300032160Peatlands SoilMKYEPTEYDRFTSLVDRVLAVPHSLIKQRVEEHRKQAANNPNRPGPKPKGKLKTSASGRAAKN
Ga0272424_1008123183300032162RockMKHSAEFEAFDNLVGRVLAVPSSVIKQRLEEHRKQAALNPNRPGPKPKQKAITPSASDPATNAH
Ga0335081_1044757213300032892SoilMILWGRMKHSAEYERFTALVDRVIAVPHSVIKERVEEHRKQAALNPNRPGPKPKRKVVK
Ga0335074_1002131633300032895SoilVKHSAEYERFTALVDRVLAVPHSVIKQRIEEHRRQAALNPNRRGPKPKRKVKPSASDPEANGDH
Ga0326728_100000371023300033402Peat SoilMNMVKQPTEYDAFTSLVDRVVAVPHAVIKQRVEEHRKQAANNPRKPGPKPKQKVRPSA
Ga0214472_1082921113300033407SoilVKHSAEYNAFTRLVDQVLAVPHAVIKQRVEEHREQADKNPKKRGPKPKVKPSSSGRASRATD
Ga0371489_0146870_37_2163300033755Peat SoilMMNMVKQPTEYDAFTSLVDRVVAVPHAVIKQRVEEHRKQAANNPRKPGPKPKQKVRPSA
Ga0326724_0652155_2_1573300034091Peat SoilMKHSSEFDRFTAFVDRVLAVPHSVIRERVEEHRRQAAQNPNRPGPKPKRKTI

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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