Metagenome / Metatranscriptome Family F075239

Basic Information
Family ID	F075239
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	69 residues
Representative Sequence	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Number of Associated Samples	103
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	36.13 %
% of genes near scaffold ends (potentially truncated)	30.25 %
% of genes from short scaffolds (< 2000 bps)	92.44 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (72.269 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (27.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.345 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.69% β-sheet: 0.00% Coil/Unstructured: 18.31%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF04679	DNA_ligase_A_C	5.88
PF02776	TPP_enzyme_N	1.68
PF09209	CecR_C	1.68
PF12680	SnoaL_2	1.68
PF02775	TPP_enzyme_C	1.68
PF02798	GST_N	0.84
PF01144	CoA_trans	0.84
PF13641	Glyco_tranf_2_3	0.84
PF09954	DUF2188	0.84
PF07859	Abhydrolase_3	0.84
PF00440	TetR_N	0.84
PF11014	DUF2852	0.84
PF02518	HATPase_c	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	5.88
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.84
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.84
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.84
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.27 %
All Organisms	root	All Organisms	27.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.27 %
cellular organisms	root	All Organisms → cellular organisms	27.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.61 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.27 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.56 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.27 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.36 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.52 %
Dictyobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.52 %
Dictyobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.52 %
Dictyobacter vulcani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter → Dictyobacter vulcani	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002JCQ0S	Not Available	515	Open in IMG/M
2189573002\|GZIGXIF02G3JWO	Not Available	503	Open in IMG/M
2189573002\|GZIGXIF02IV6X1	Not Available	504	Open in IMG/M
3300002245\|JGIcombinedJ26739_100123326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2440	Open in IMG/M
3300003505\|JGIcombinedJ51221_10002129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5335	Open in IMG/M
3300003505\|JGIcombinedJ51221_10033752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1878	Open in IMG/M
3300005332\|Ga0066388_100740022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1585	Open in IMG/M
3300005332\|Ga0066388_105236116	Not Available	658	Open in IMG/M
3300005332\|Ga0066388_107205584	Not Available	559	Open in IMG/M
3300005363\|Ga0008090_15451089	All Organisms → cellular organisms → Bacteria	2352	Open in IMG/M
3300005435\|Ga0070714_102066978	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005436\|Ga0070713_100728807	Not Available	947	Open in IMG/M
3300005437\|Ga0070710_10185787	Not Available	1304	Open in IMG/M
3300005457\|Ga0070662_100357893	Not Available	1197	Open in IMG/M
3300005602\|Ga0070762_10847765	Not Available	620	Open in IMG/M
3300005602\|Ga0070762_11284834	Not Available	508	Open in IMG/M
3300005610\|Ga0070763_10629891	Not Available	624	Open in IMG/M
3300005764\|Ga0066903_104519533	Not Available	742	Open in IMG/M
3300005921\|Ga0070766_11317801	Not Available	500	Open in IMG/M
3300006028\|Ga0070717_10252116	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300006059\|Ga0075017_100471437	Not Available	949	Open in IMG/M
3300006086\|Ga0075019_10843019	Not Available	586	Open in IMG/M
3300006173\|Ga0070716_100423130	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300006176\|Ga0070765_100369447	Not Available	1335	Open in IMG/M
3300006176\|Ga0070765_100387318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1303	Open in IMG/M
3300006354\|Ga0075021_10287642	Not Available	1017	Open in IMG/M
3300006603\|Ga0074064_11466150	Not Available	541	Open in IMG/M
3300009553\|Ga0105249_10713332	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300009683\|Ga0116224_10150486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1121	Open in IMG/M
3300010046\|Ga0126384_10951511	Not Available	779	Open in IMG/M
3300010358\|Ga0126370_11095384	Not Available	734	Open in IMG/M
3300010376\|Ga0126381_102550649	Not Available	732	Open in IMG/M
3300010379\|Ga0136449_100808425	Not Available	1547	Open in IMG/M
3300010379\|Ga0136449_101137719	Not Available	1237	Open in IMG/M
3300010379\|Ga0136449_101152338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1227	Open in IMG/M
3300010379\|Ga0136449_102469985	Not Available	746	Open in IMG/M
3300010396\|Ga0134126_11030262	Not Available	921	Open in IMG/M
3300010398\|Ga0126383_10214060	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300011418\|Ga0153954_1110193	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300012951\|Ga0164300_10088678	Not Available	1330	Open in IMG/M
3300012951\|Ga0164300_10585224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	655	Open in IMG/M
3300012955\|Ga0164298_10129516	Not Available	1385	Open in IMG/M
3300012958\|Ga0164299_11345901	Not Available	549	Open in IMG/M
3300012960\|Ga0164301_10051608	Not Available	2122	Open in IMG/M
3300012961\|Ga0164302_11438556	Not Available	565	Open in IMG/M
3300012971\|Ga0126369_12984845	Not Available	554	Open in IMG/M
3300012984\|Ga0164309_11233761	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300012985\|Ga0164308_10464382	Not Available	1051	Open in IMG/M
3300012986\|Ga0164304_10156785	Not Available	1441	Open in IMG/M
3300012986\|Ga0164304_11888456	Not Available	500	Open in IMG/M
3300012987\|Ga0164307_11315105	Not Available	605	Open in IMG/M
3300012989\|Ga0164305_11963711	Not Available	533	Open in IMG/M
3300015371\|Ga0132258_11160830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1952	Open in IMG/M
3300015373\|Ga0132257_102431789	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300016371\|Ga0182034_11564074	Not Available	578	Open in IMG/M
3300016387\|Ga0182040_10650454	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300016404\|Ga0182037_10499586	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300017955\|Ga0187817_10532304	Not Available	750	Open in IMG/M
3300017995\|Ga0187816_10493005	Not Available	551	Open in IMG/M
3300020069\|Ga0197907_10848337	Not Available	1014	Open in IMG/M
3300020070\|Ga0206356_10587754	Not Available	584	Open in IMG/M
3300020077\|Ga0206351_10922592	Not Available	676	Open in IMG/M
3300020078\|Ga0206352_11314914	Not Available	554	Open in IMG/M
3300020080\|Ga0206350_10059808	Not Available	786	Open in IMG/M
3300020581\|Ga0210399_10785093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300020582\|Ga0210395_10278733	Not Available	1257	Open in IMG/M
3300020582\|Ga0210395_11223464	Not Available	551	Open in IMG/M
3300020583\|Ga0210401_10299848	Not Available	1468	Open in IMG/M
3300021088\|Ga0210404_10291506	Not Available	896	Open in IMG/M
3300021171\|Ga0210405_10761068	Not Available	744	Open in IMG/M
3300021180\|Ga0210396_10170897	Not Available	1948	Open in IMG/M
3300021180\|Ga0210396_11162667	Not Available	647	Open in IMG/M
3300021401\|Ga0210393_11554639	Not Available	525	Open in IMG/M
3300021420\|Ga0210394_10893170	Not Available	773	Open in IMG/M
3300021475\|Ga0210392_10816039	Not Available	697	Open in IMG/M
3300021479\|Ga0210410_10176457	All Organisms → cellular organisms → Bacteria → Proteobacteria	1910	Open in IMG/M
3300021560\|Ga0126371_10441894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1446	Open in IMG/M
3300022467\|Ga0224712_10242558	Not Available	830	Open in IMG/M
3300022504\|Ga0242642_1058594	Not Available	613	Open in IMG/M
3300022557\|Ga0212123_10804753	Not Available	565	Open in IMG/M
3300025906\|Ga0207699_10720271	Not Available	731	Open in IMG/M
3300025915\|Ga0207693_10257648	Not Available	1368	Open in IMG/M
3300025928\|Ga0207700_10636340	Not Available	951	Open in IMG/M
3300025933\|Ga0207706_10287361	Not Available	1434	Open in IMG/M
3300025939\|Ga0207665_11134646	Not Available	623	Open in IMG/M
3300026118\|Ga0207675_101866940	Not Available	620	Open in IMG/M
3300026998\|Ga0208369_1030198	Not Available	536	Open in IMG/M
3300027047\|Ga0208730_1029767	Not Available	631	Open in IMG/M
3300027069\|Ga0208859_1000888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2748	Open in IMG/M
3300027076\|Ga0208860_1022396	Not Available	642	Open in IMG/M
3300027109\|Ga0208603_1006425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1949	Open in IMG/M
3300027575\|Ga0209525_1043715	Not Available	1097	Open in IMG/M
3300027894\|Ga0209068_10290189	Not Available	917	Open in IMG/M
3300027898\|Ga0209067_10306108	Not Available	874	Open in IMG/M
3300028906\|Ga0308309_10549807	Not Available	1000	Open in IMG/M
3300029701\|Ga0222748_1033188	Not Available	819	Open in IMG/M
3300031231\|Ga0170824_111802708	Not Available	563	Open in IMG/M
3300031474\|Ga0170818_107409243	Not Available	551	Open in IMG/M
3300031719\|Ga0306917_10913739	Not Available	687	Open in IMG/M
3300031719\|Ga0306917_11172607	Not Available	597	Open in IMG/M
3300031744\|Ga0306918_11111205	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300031754\|Ga0307475_11552956	Not Available	507	Open in IMG/M
3300031770\|Ga0318521_11031270	Not Available	505	Open in IMG/M
3300031782\|Ga0318552_10734462	Not Available	504	Open in IMG/M
3300031833\|Ga0310917_10746857	Not Available	662	Open in IMG/M
3300031846\|Ga0318512_10545216	Not Available	590	Open in IMG/M
3300031890\|Ga0306925_10169698	Not Available	2351	Open in IMG/M
3300031910\|Ga0306923_10996200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter → Dictyobacter vulcani	911	Open in IMG/M
3300031942\|Ga0310916_10122418	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300031946\|Ga0310910_10807242	Not Available	739	Open in IMG/M
3300031962\|Ga0307479_11718038	Not Available	581	Open in IMG/M
3300031962\|Ga0307479_12104675	Not Available	512	Open in IMG/M
3300032160\|Ga0311301_10052509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9256	Open in IMG/M
3300032160\|Ga0311301_12637108	Not Available	556	Open in IMG/M
3300032828\|Ga0335080_11365867	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300032893\|Ga0335069_11626837	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300032896\|Ga0335075_10997223	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300032898\|Ga0335072_10048887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5712	Open in IMG/M
3300033289\|Ga0310914_11423451	Not Available	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.12%
Host-Associated	Host-Associated	5.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.39%
Aquatic	Environmental → Aquatic	6.72%
Plants	Host-Associated → Plants	5.04%
Fungi	Host-Associated → Fungi	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.39%
Sediment	Environmental → Aquatic → Sediment	4.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.52%
Freshwater	Environmental → Aquatic → Freshwater	1.68%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.84%
Mycelium	Host-Associated → Fungi → Mycelium	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.66%
Loam	Environmental → Terrestrial → Soil → Loam	24.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.68%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.84%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.68%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.84%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	5.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.20%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.68%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.84%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_06789500	2170459003	Grass Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
FE1_06836370	2189573002	Grass Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKAFNVRSEMITRCKLNIQEYRETIAALEEQAGK
FE1_06609650	2189573002	Grass Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLDIQKYRETIAALEEQAGK
JGIcombinedJ26739_1001233265	3300002245	Forest Soil	MTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQXGK*
JGIcombinedJ51221_100021291	3300003505	Forest Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKAFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
JGIcombinedJ51221_100337524	3300003505	Forest Soil	MPDIQAMTKQLSDQLKRESESLELWNSFEPVTVTDERRKTFNVRSEMITRCKLNIQKYRETIAALEEQA
Ga0066388_1007400222	3300005332	Tropical Forest Soil	MPDIQAMTEQLKDQLEQESQSLALWKSFEPISVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQMSA*
Ga0066388_1052361162	3300005332	Tropical Forest Soil	MPDTQAMTKQLKDQLDRESQSLALWNSFEPIDVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQTSN*
Ga0066388_1072055842	3300005332	Tropical Forest Soil	MPDIQAMTKQLNDQLKRESESLNLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEDKAGK*
Ga0008090_154510892	3300005363	Tropical Rainforest Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEDKAGK*
Ga0070714_1020669782	3300005435	Agricultural Soil	MPDIQAMTKQLKDQLDRESQSLALWNSFGPINVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQTGN*
Ga0070713_1007288071	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTKQLNDQLKRESESLDLWNSFEPITVTDQRGKTFNVRSEMITRCKLNIQKYRETIAALEGQAGK*
Ga0070710_101857872	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKAFNVRSEMITRCKLNIQKYRETIAALEGQAGK*
Ga0070662_1003578931	3300005457	Corn Rhizosphere	QPMPDIQAMTKQLSDQLKRESESLKLWNSFEPITVTDQRRKSFNVRSEMITRCKLNIQKYRETIAALEEKADK*
Ga0070762_108477652	3300005602	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAG
Ga0070762_112848342	3300005602	Soil	MPDIQAMTKQLNDQLQRENECLKLWNTFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYREAIAALEEKTSK*
Ga0070763_106298912	3300005610	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
Ga0066903_1045195331	3300005764	Tropical Forest Soil	MPDIQAMTKQLNDQLKRESESLKLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEDKAGK*
Ga0070766_113178011	3300005921	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRE
Ga0070717_102521163	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIQAMTKHLKDQLDRESQSLALWNSFGPINVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQTGN*
Ga0075017_1004714372	3300006059	Watersheds	MPDIQAMTKQLNDQLKRESESLELWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
Ga0075019_108430192	3300006086	Watersheds	AMTKQLNDQLKRESESLELWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
Ga0070716_1004231302	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIEAMTKQLNDQLKRESESLELWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEERAGN*
Ga0070765_1003694471	3300006176	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIVALEEQAGK*
Ga0070765_1003873181	3300006176	Soil	MPDIEAMTKQLNDQLKRESESLELLNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRE
Ga0075021_102876421	3300006354	Watersheds	MPDIQAMTKLLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
Ga0074064_114661502	3300006603	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
Ga0105249_107133322	3300009553	Switchgrass Rhizosphere	MPDIQAMTKQLSDQLKRESESLKLWNSFEPITVTDQRRKSFNVRSEMITRCKLNIQKYRETIAALEEKADK*
Ga0116224_101504863	3300009683	Peatlands Soil	MPDIQAMTKQLNDQLKRESDSLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
Ga0126384_109515111	3300010046	Tropical Forest Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNQRYRETIAALEEKAHK*
Ga0126370_110953841	3300010358	Tropical Forest Soil	MPDTQAMTKQLKDQLDRESQSLALWKSFEPVSVTDQRRKTFNVRSEMITRCKLNIQKYR
Ga0126381_1025506491	3300010376	Tropical Forest Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQRYRETIAALEEKAHK*
Ga0136449_1008084253	3300010379	Peatlands Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRE
Ga0136449_1011377191	3300010379	Peatlands Soil	MPDIQAMTKLLNDQLKRESVSLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0136449_1011523383	3300010379	Peatlands Soil	MPDIQAMTKQLNDQLKRESDSLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRE
Ga0136449_1024699852	3300010379	Peatlands Soil	MPDIQAMTKQLNDQLKRESDSLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
Ga0134126_110302622	3300010396	Terrestrial Soil	MTKQLSDQLKRESESLKLWNSFEPITVTDQRRKSFNVRSEMITRCKLNIQKYRETIAALEEKADK*
Ga0126383_102140602	3300010398	Tropical Forest Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEKADK*
Ga0153954_11101932	3300011418	Attine Ant Fungus Gardens	MPNIQAMTKQLNEQLHRESECLKLWADFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYR
Ga0164300_100886782	3300012951	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEGQAGK*
Ga0164300_105852241	3300012951	Soil	MPNIQAMTKQLNDQLKRESESLELWNSFESVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIVALEERAGN*
Ga0164298_101295161	3300012955	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRGKTFNVRSEMITRCKLNIQKYRETIAALEGQAGK*
Ga0164299_113459011	3300012958	Soil	MPDVQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEGQAGK*
Ga0164301_100516081	3300012960	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRGKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
Ga0164302_114385562	3300012961	Soil	MPDIEAMTKQLNDQLKRESESLELWNSFEPVTVKDQRRKTFNVRSEMITRCKLNIQKYRE
Ga0126369_129848452	3300012971	Tropical Forest Soil	MPEIQAMTKQLNDQLKRESESLKLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEDKAGK*
Ga0164309_112337611	3300012984	Soil	MPDIQAITKQLNDQLKRESESLELWNSFESVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEERAGN*
Ga0164308_104643821	3300012985	Soil	MPDIQAMTKQLSDQLKRESESLELWNSFEPVTVTDERRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
Ga0164304_101567852	3300012986	Soil	MPDIEAMTKQLNDQLKRESESLELWNSFEPVTVKDQRRKTFNVRSEMITRCKLNIQKYREMIAALEEQAGK*
Ga0164304_118884561	3300012986	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPVTVSDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK*
Ga0164307_113151051	3300012987	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEGQAGK*
Ga0164305_119637111	3300012989	Soil	MPDIQAMTKQLNDQLKRESESLELWNSFEPVTVKDQRRKTFNVRSEMITRCKLNIQKYREMIAALEEQAGK*
Ga0132258_111608303	3300015371	Arabidopsis Rhizosphere	DIQAMTKQLKDQLDRESQSLALWNSLEPVNVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQTSN*
Ga0132257_1024317892	3300015373	Arabidopsis Rhizosphere	QAMPDIQAMTKQLKDQLDRESQSLALWNSFEPISVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQTGN*
Ga0182034_115640741	3300016371	Soil	PMPDIQAMTKQLNDQLKRESESLDLFNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETVAALEDKAGK
Ga0182040_106504542	3300016387	Soil	MPDIQAMTEQLKDQLEQESQSLALWKSFEPISVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQMSA
Ga0182037_104995862	3300016404	Soil	MPDIQAMTEQLKDQLEQESQSLALWKSFEPISVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQTSG
Ga0187817_105323042	3300017955	Freshwater Sediment	MPNIQAMTKQLNDQLKRESESLELWNSFKPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0187816_104930052	3300017995	Freshwater Sediment	MPDIQAMTKQLNDQLKRESEFLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0197907_108483372	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIQAMTKHLKDQLDRESQSLALWNSLEPINVTDQRRKTFNVRPEMITRCKLNIQKYRETIAALEEQTSN
Ga0206356_105877542	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIQAMTKQLQDQLDRESRSLALWNSFEPISVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQ
Ga0206351_109225922	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MTKHLKDQLDRESRSLALWNSFEPISVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEERTSQ
Ga0206352_113149142	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIQAMTKHLKDQLDRESQSLALWNSFGPINVTDQRRKTFNVRSEMITRCKLNIQKYR
Ga0206350_100598081	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MTKHLKDQLDRESQSLALWNSFGPINVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQTSN
Ga0210399_107850931	3300020581	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAG
Ga0210395_102787331	3300020582	Soil	MTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMIARCKLNIQKYRETIAALEEQAGK
Ga0210395_112234641	3300020582	Soil	MPDIQAMTKQLNDQLQRENECLKLWNTFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYREAIAALEEKTSK
Ga0210401_102998481	3300020583	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKAFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0210404_102915063	3300021088	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRATIAALEEQAGK
Ga0210405_107610681	3300021171	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0210396_101708972	3300021180	Soil	MTKQLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0210396_111626671	3300021180	Soil	MYEIQAMTKHLNDQLKRENESLELWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEERAGK
Ga0210393_115546391	3300021401	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIA
Ga0210394_108931702	3300021420	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETICW
Ga0210392_108160392	3300021475	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRRKLNIQKYRETIAALEEQAGK
Ga0210410_101764574	3300021479	Soil	MPDIQAMTKQLSDQLKRESESLELWNSFEPVTVTDERRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0126371_104418942	3300021560	Tropical Forest Soil	MPDIQAMTEQLKDQLEKESQSLALWKSFEPISVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQMSA
Ga0224712_102425582	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIQAMTKQLQDQLDRESRSLALWNSFEPISVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEERTSQ
Ga0242642_10585941	3300022504	Soil	MPDIQAMTKQLNDQLKRESESLYLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0212123_108047531	3300022557	Iron-Sulfur Acid Spring	MPDIQAMTKLLNDQLKRENESLELWNSFEPVTVTDQRRKTFNVRSEMVTRCKLNIQKYRETIAALEEQAGK
Ga0207699_107202713	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIQAMTKHLKDQLDRESQSLALWNSFGPINVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQTSN
Ga0207693_102576482	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIEAMTKQLNDQLKRESESLELWNSFEPVTVTDERRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0207700_106363401	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRGKTFNVRSEMITRCKLNIQKYRETIAALEGQAGK
Ga0207706_102873612	3300025933	Corn Rhizosphere	QPMPDIQAMTKQLSDQLKRESESLKLWNSFEPITVTDQRRKSFNVRSEMITRCKLNIQKYRETIAALEEKADK
Ga0207665_111346461	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIEAMTKQLNDQLKRESESLELWNSFQPVTVKDQRRKTFNVRSEMITRCKLNIQKYRETIDALEEQAGK
Ga0207675_1018669401	3300026118	Switchgrass Rhizosphere	TERKRGQPMPDIQAMTKQLSDQLKRESESLKLWNSFEPITVTDQRRKSFNVRSEMITRCKLNIQKYRETIAALEEKADK
Ga0208369_10301982	3300026998	Forest Soil	MTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNVQKYRETIAGLEEQAGK
Ga0208730_10297671	3300027047	Forest Soil	MGSKEFQLNDQLKRESESLELWNFFEPVTVTDERRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0208859_10008884	3300027069	Forest Soil	MPDIQAMTNQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAGLEEQAGK
Ga0208860_10223961	3300027076	Forest Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRATIAALEEQAGK
Ga0208603_10064251	3300027109	Forest Soil	MTKQLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAGLEEQAGK
Ga0209525_10437153	3300027575	Forest Soil	MTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0209068_102901891	3300027894	Watersheds	MPDIQAMTKLLNDQLKRESESLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0209067_103061082	3300027898	Watersheds	MPDIQAMTKQLNDQLKRESESLELWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0308309_105498071	3300028906	Soil	PDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKAFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0222748_10331882	3300029701	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAGLEGQAGK
Ga0170824_1118027081	3300031231	Forest Soil	TKQLNDQLKRESESLELWNSFEPVTVTDQRRKTFNVRSEMITRCKLKIQKYRETIAGL
Ga0170818_1074092432	3300031474	Forest Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCELNIQKYRETIAALEEQAGK
Ga0306917_109137391	3300031719	Soil	QAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETVAALEDKAGK
Ga0306917_111726072	3300031719	Soil	QAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEDKAGK
Ga0306918_111112052	3300031744	Soil	MPDIQAMTKQLNDQLKRESESLELWNSFDPITVTDQRRKTFNVRSEMITRCKLNIQKYRETVAALEDKAGK
Ga0307475_115529561	3300031754	Hardwood Forest Soil	MPDIEAMTKQLNDQLKRESESLELWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0318521_110312701	3300031770	Soil	MPDIQAMTKQLNDQLKRESESLELWNSFDPITVTDQRRKTFNVRSEMITRCKLNIQKYGR
Ga0318552_107344621	3300031782	Soil	MPDIQAMTKQLNDQLKRESESLELWNSFDPITVTDQRRKTFNVRSEMITRCKLNTQKYRETIAALEDKAGK
Ga0310917_107468572	3300031833	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTHQRRKTFNVRSEMITRCKLNIQKYRETIAALEDKAGK
Ga0318512_105452162	3300031846	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTHQRRKTFNVRSEMITRCKLNIQKYRETKAALEDKAGK
Ga0306925_101696982	3300031890	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEDKAGK
Ga0306923_109962002	3300031910	Soil	MPDIQAMTKQLNDQLKRESESLELWNSFDPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEDKAGK
Ga0310916_101224182	3300031942	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPIIVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEDKAGK
Ga0310910_108072422	3300031946	Soil	MPDIQAMTKQLNDQLKRESESLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETVAALEDKAGK
Ga0307479_117180381	3300031962	Hardwood Forest Soil	MPDIEGMTKQLNDQLKRESESLELWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0307479_121046751	3300031962	Hardwood Forest Soil	MHEIQAMTKHLNDQLKRENESLELWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEERAG
Ga0311301_100525091	3300032160	Peatlands Soil	MPDIQAMTKQLNDQLKRESDSLDLWNSFEPITVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAG
Ga0311301_126371082	3300032160	Peatlands Soil	MPDIQAMTKQLNDQLKRESDSLDLWNSFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQAGK
Ga0335080_113658672	3300032828	Soil	AMTKQLKDQLDRESQSLALWNSFEPISVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQTSQ
Ga0335069_116268372	3300032893	Soil	MADIQAMTKQLKDQLERESQSLTRWNSFEPVHVTDQRRKTFNVRSEMITRCKLNIQKYRETIAALEEQSSK
Ga0335075_109972231	3300032896	Soil	MPDIQAMTKQLNDQLQRENECLKMWNTFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYREAIAAL
Ga0335072_100488877	3300032898	Soil	MPDIQAMTKQLNDQLQRENECLKMWNTFEPVTVTDQRRKTFNVRSEMITRCKLNIQKYREAIAALEEKTSK
Ga0310914_114234512	3300033289	Soil	MPDIQAMTKQLNDQLKRESESLELWNSFDPITVTDQRRKTFNVRSEMITRCKLNIQK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075239

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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