Metagenome / Metatranscriptome Family F075248

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075248
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	69 residues
Representative Sequence	VQSQQLPTESQVLEDEVLPGTENADQPTEEMSKRHDHGKNCSGKVRIELFAKSFILQVYDVLARH
Number of Associated Samples	101
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.03 %
% of genes near scaffold ends (potentially truncated)	66.39 %
% of genes from short scaffolds (< 2000 bps)	80.67 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.277 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.96% β-sheet: 0.00% Coil/Unstructured: 72.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13683	rve_3	6.72
PF02371	Transposase_20	3.36
PF00440	TetR_N	2.52
PF02780	Transketolase_C	2.52
PF01548	DEDD_Tnp_IS110	2.52
PF08281	Sigma70_r4_2	1.68
PF13545	HTH_Crp_2	1.68
PF16697	Yop-YscD_cpl	0.84
PF04255	DUF433	0.84
PF01804	Penicil_amidase	0.84
PF05368	NmrA	0.84
PF07635	PSCyt1	0.84
PF05226	CHASE2	0.84
PF00903	Glyoxalase	0.84
PF01593	Amino_oxidase	0.84
PF06296	RelE	0.84
PF00665	rve	0.84
PF14903	WG_beta_rep	0.84
PF00801	PKD	0.84
PF00005	ABC_tran	0.84
PF13031	DUF3892	0.84
PF05988	DUF899	0.84
PF12700	HlyD_2	0.84
PF13460	NAD_binding_10	0.84
PF01381	HTH_3	0.84
PF07676	PD40	0.84
PF13533	Biotin_lipoyl_2	0.84
PF14534	DUF4440	0.84
PF01058	Oxidored_q6	0.84
PF07638	Sigma70_ECF	0.84
PF02687	FtsX	0.84
PF00881	Nitroreductase	0.84
PF02353	CMAS	0.84
PF10263	SprT-like	0.84
PF01432	Peptidase_M3	0.84
PF01274	Malate_synthase	0.84
PF00743	FMO-like	0.84
PF00689	Cation_ATPase_C	0.84
PF08447	PAS_3	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	5.88
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.84
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.84
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.84
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.84
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.84
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.84
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.84
COG2225	Malate synthase	Energy production and conversion [C]	0.84
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.84
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.84
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.84
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.84
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.84
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.84
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.84
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.84
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	0.84
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.84
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.84
COG4737	Uncharacterized conserved protein	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.28 %
Unclassified	root	N/A	6.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.28 %
Unclassified	root	N/A	6.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.28 %
Unclassified	root	N/A	6.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	67.23 %
Unclassified	root	N/A	6.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	47.06 %
Unclassified	root	N/A	6.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.04 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.22 %
Unclassified	root	N/A	6.72 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.36 %
Acidobacteria bacterium 13_2_20CM_2_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	0.84 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.84 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.22 %
Unclassified	root	N/A	6.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.36 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.84 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.84 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.84 %
Acidobacteria bacterium 13_2_20CM_2_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.22 %
Unclassified	root	N/A	6.72 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.84 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.84 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.84 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.84 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.84 %
Acidobacteria bacterium 13_2_20CM_2_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.22 %
Unclassified	root	N/A	6.72 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.84 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.84 %
Cupriavidus necator	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus necator	0.84 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.84 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.84 %
Acidobacteria bacterium 13_2_20CM_2_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.22 %
Unclassified	root	N/A	6.72 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.84 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.84 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.84 %
Cupriavidus necator	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus necator	0.84 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.84 %
Acidobacteria bacterium 13_2_20CM_2_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459012\|GOYVCMS02IJUAC	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
2209111022\|2221196188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300002562\|JGI25382J37095_10141413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300002914\|JGI25617J43924_10108617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300004080\|Ga0062385_10142024	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300004092\|Ga0062389_100404457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1485	Open in IMG/M
3300004092\|Ga0062389_103145348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300004152\|Ga0062386_100909798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300005175\|Ga0066673_10745837	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300005175\|Ga0066673_10783986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300005435\|Ga0070714_100240814	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300005439\|Ga0070711_100719761	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300005445\|Ga0070708_101228476	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300005450\|Ga0066682_10015374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4191	Open in IMG/M
3300005451\|Ga0066681_10245575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	1084	Open in IMG/M
3300005554\|Ga0066661_10789677	Not Available	555	Open in IMG/M
3300005555\|Ga0066692_10293216	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300006032\|Ga0066696_11007694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300006173\|Ga0070716_100239974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1228	Open in IMG/M
3300006176\|Ga0070765_100307462	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300006797\|Ga0066659_11143419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300006800\|Ga0066660_10000882	All Organisms → cellular organisms → Bacteria	11766	Open in IMG/M
3300006854\|Ga0075425_100700125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1163	Open in IMG/M
3300006893\|Ga0073928_10420263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300006953\|Ga0074063_11636233	Not Available	584	Open in IMG/M
3300007255\|Ga0099791_10303717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300007258\|Ga0099793_10015340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3058	Open in IMG/M
3300007258\|Ga0099793_10064737	All Organisms → cellular organisms → Bacteria → Proteobacteria	1641	Open in IMG/M
3300009624\|Ga0116105_1123266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300010048\|Ga0126373_12604505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300010339\|Ga0074046_10157233	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300010341\|Ga0074045_10178222	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300010366\|Ga0126379_13746229	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300012198\|Ga0137364_10070991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2382	Open in IMG/M
3300012198\|Ga0137364_11472519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012200\|Ga0137382_10001702	All Organisms → cellular organisms → Bacteria	9843	Open in IMG/M
3300012200\|Ga0137382_10931012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300012202\|Ga0137363_10373560	All Organisms → cellular organisms → Bacteria → Acidobacteria	1184	Open in IMG/M
3300012202\|Ga0137363_11688367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300012203\|Ga0137399_10094194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2302	Open in IMG/M
3300012203\|Ga0137399_10576497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300012205\|Ga0137362_10880060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300012205\|Ga0137362_11554403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012207\|Ga0137381_10218075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1655	Open in IMG/M
3300012210\|Ga0137378_10816838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300012349\|Ga0137387_10193889	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300012357\|Ga0137384_10837725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300012359\|Ga0137385_10893277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300012363\|Ga0137390_10991608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300012582\|Ga0137358_10249086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300012683\|Ga0137398_10021673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3501	Open in IMG/M
3300012683\|Ga0137398_10872354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	628	Open in IMG/M
3300012922\|Ga0137394_10446156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1101	Open in IMG/M
3300012923\|Ga0137359_10348658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1316	Open in IMG/M
3300012923\|Ga0137359_11706063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300012925\|Ga0137419_10147596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1694	Open in IMG/M
3300012927\|Ga0137416_12012356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300012929\|Ga0137404_10162010	Not Available	1869	Open in IMG/M
3300014165\|Ga0181523_10369186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus necator	802	Open in IMG/M
3300015053\|Ga0137405_1250250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300015054\|Ga0137420_1341555	All Organisms → cellular organisms → Bacteria → Acidobacteria	5319	Open in IMG/M
3300015241\|Ga0137418_10058910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3519	Open in IMG/M
3300015371\|Ga0132258_11034893	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300015372\|Ga0132256_102275857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300016445\|Ga0182038_10846395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300017822\|Ga0187802_10055909	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300017823\|Ga0187818_10420592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300017933\|Ga0187801_10080027	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300017935\|Ga0187848_10073132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1602	Open in IMG/M
3300017946\|Ga0187879_10368379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300017955\|Ga0187817_10453991	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300017955\|Ga0187817_10966319	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300017995\|Ga0187816_10482950	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300020199\|Ga0179592_10001722	All Organisms → cellular organisms → Bacteria → Acidobacteria	8915	Open in IMG/M
3300020580\|Ga0210403_10019864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	5367	Open in IMG/M
3300020581\|Ga0210399_10502622	Not Available	1008	Open in IMG/M
3300020581\|Ga0210399_10795927	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300020583\|Ga0210401_10262975	All Organisms → cellular organisms → Bacteria → Acidobacteria	1585	Open in IMG/M
3300020583\|Ga0210401_10582467	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300021088\|Ga0210404_10152189	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300021168\|Ga0210406_10117516	All Organisms → cellular organisms → Bacteria → Acidobacteria	2250	Open in IMG/M
3300021171\|Ga0210405_10610010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300021178\|Ga0210408_10274750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1343	Open in IMG/M
3300021180\|Ga0210396_10266717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1520	Open in IMG/M
3300021402\|Ga0210385_10213878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1406	Open in IMG/M
3300021403\|Ga0210397_10290512	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300021405\|Ga0210387_10655331	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300021432\|Ga0210384_10006724	All Organisms → cellular organisms → Bacteria	12209	Open in IMG/M
3300021432\|Ga0210384_10016837	All Organisms → cellular organisms → Bacteria	7161	Open in IMG/M
3300021432\|Ga0210384_11286755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300021475\|Ga0210392_10025672	All Organisms → cellular organisms → Bacteria → Proteobacteria	3401	Open in IMG/M
3300021478\|Ga0210402_10559816	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300021559\|Ga0210409_10070394	All Organisms → cellular organisms → Bacteria → Acidobacteria	3255	Open in IMG/M
3300021559\|Ga0210409_10298510	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300025916\|Ga0207663_10702394	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300026320\|Ga0209131_1184223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1001	Open in IMG/M
3300026334\|Ga0209377_1248096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300026335\|Ga0209804_1014706	All Organisms → cellular organisms → Bacteria	4161	Open in IMG/M
3300026532\|Ga0209160_1159624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300026551\|Ga0209648_10139485	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300027069\|Ga0208859_1002999	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300027460\|Ga0207506_1005896	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300027587\|Ga0209220_1050519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1110	Open in IMG/M
3300027698\|Ga0209446_1192024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300027812\|Ga0209656_10017854	All Organisms → cellular organisms → Bacteria	4374	Open in IMG/M
3300027905\|Ga0209415_10939004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300027910\|Ga0209583_10565416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300028379\|Ga0268266_10473188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1194	Open in IMG/M
3300028536\|Ga0137415_10054181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3879	Open in IMG/M
3300030851\|Ga0075380_11549149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300031057\|Ga0170834_100495689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1456	Open in IMG/M
3300031231\|Ga0170824_113517454	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300031474\|Ga0170818_103222563	All Organisms → cellular organisms → Bacteria → Acidobacteria	1483	Open in IMG/M
3300031753\|Ga0307477_11076234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300031754\|Ga0307475_11251208	Not Available	576	Open in IMG/M
3300032205\|Ga0307472_101158955	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.64%
Host-Associated	Host-Associated	3.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.51%
Aquatic	Environmental → Aquatic	15.13%
Plants	Host-Associated → Plants	3.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.51%
Freshwater	Environmental → Aquatic → Freshwater	13.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.84%
Sediment	Environmental → Aquatic → Sediment	0.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.45%
Loam	Environmental → Terrestrial → Soil → Loam	9.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.68%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.84%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.68%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.84%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.84%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030851	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N56_04388290	2170459012	Grass Soil	LPVESQVFKDEVLVGTESADNPIEKKSERNDHGENLIGTIRIQPFAKSFILQVYDAL
2222017892	2209111022	Grass Soil	VQSQQLPTESQVLEDEVLPGTENADQPTEEMSKRHDHGKNFSGKSESSFAKSFILQVYDVLARHR
JGI25382J37095_101414132	3300002562	Grasslands Soil	VQCQQLPTESHVFEDEVRPATEPTDQPAEEMPERHDHGKNFSGKDRIKLYSKSLI
JGI25617J43924_101086172	3300002914	Grasslands Soil	VHSQQLPTESQVLEDEVLPGTENADQATEEMSERHDDSRNYIGKVRIELCAKSFILQVYDVLARQCDQKR*
Ga0062385_101420243	3300004080	Bog Forest Soil	SQQLLTQSQVFEDEVLPGTESADHPPEEMPERHDHGKNLIGTVRIELFAKSHILTGYEVLARHTVSGQLLLVGYR*
Ga0062389_1004044574	3300004092	Bog Forest Soil	QQLLTESQVFEDEVLPGTESADHPAEEMSERHDHGKNLSGKVQIQLCAKSFILQVYDVLARLILSMG*
Ga0062389_1031453481	3300004092	Bog Forest Soil	VQGSQLTARSLRVQSQQLPTKSQVFEDEVLPGTERTDQPAEEMSERHDHGMNLIGKVRIEFCPKSFILRVYNVLARHSGR
Ga0062386_1009097982	3300004152	Bog Forest Soil	MRVQSQQLPTESQVFEDEILPGAESTDCPTEEMSERHDHGMNLIGKVRIEFCPKSFILRVYNVLARHSGRLATTSPR
Ga0066673_107458371	3300005175	Soil	LPTESQVFEDEVLARTASAEHPTEEMSERHDHSKNLIGTIRIQLFAKSFISQVYDVLARHTLILDARKR*
Ga0066673_107839861	3300005175	Soil	VQSQQLPTESHVFEDEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKLYAKSLISQVYDLLARH
Ga0066388_1057416972	3300005332	Tropical Forest Soil	MESQVLKDEVLTGAETAEQPAEQMSDRSEHSWNHIGKVRIKLCAKSFILQVY
Ga0070714_1002408144	3300005435	Agricultural Soil	VQSQQLPTESQVLEDEVLTGTENADQPTEEMSKRHDHGKNCSGKIRIELCAKSFILQVYDVLARHSLTVIEY*
Ga0070711_1007197611	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SQQLPTESQVLEDEVLPGTENADQPTEEMSERHDHGRNYVGKVRIELCAKSFILQVYAVLARLAHGFVKF*
Ga0070708_1012284761	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VQSQQLPTESQVLEDEVLPGTENADQPAEEMSERYDHGKNFTGKIRIQLFAKSFILQVYDVLARHSF*
Ga0066682_100153741	3300005450	Soil	VFEDEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKLYAKSLI*
Ga0066681_102455753	3300005451	Soil	VRPATERTDQPAEEMPERHDHGKNFSGKDRIKLYAKSLILQVYDLLARHTAA*
Ga0066661_107896772	3300005554	Soil	LVQTSQSMARPLRMQSQQLPTESQVFEDEVLAGTASAGHSKNLIGTIRIQLFSRSFILPVYDVLARHGP*
Ga0066692_102932161	3300005555	Soil	QQLPTESHVFEDEVRPATERTDQPAEEMPERHDHDKNFSGKDRIELCAKSLISLVYDLLARHNQ*
Ga0066696_110076941	3300006032	Soil	VQSQQLPTENQVFEDEVRPATERTDQPAEEMSERRDHSKNLTGTVQIQRCAKSFILQVYDVLARHR
Ga0070716_1002399743	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VQSQQLPTESQVLEDEVLPGTESADQPTEEMSKRHDHGKNCSGKIRIELCAKSFILQVYDVLARHSLTVIEY*
Ga0070765_1003074621	3300006176	Soil	VQSQQLPTKSQVFEDEVAGTESAGYPTEEMSERHDHGKNFSGKDRIKLCAKSFIS*
Ga0066659_111434192	3300006797	Soil	LPTESQVFEDEVRPATERTDQPAEEMSERHDRGKNFSGKDRIKPCAKSFISQVYDLLAR
Ga0066660_1000088217	3300006800	Soil	MQSQQLPTESQVFEDEVLAGTASAGHSKNLIGTIRIQLFSRSFILPVYDVLARHGP*
Ga0075425_1007001251	3300006854	Populus Rhizosphere	VQSQQLPTESQVLEDEVLPGTENADQPAEEMSERYDHGKNFTGKIRIELRAKSFILQVYDVLARHAVKLYGMAEKEKLKC*
Ga0073928_104202632	3300006893	Iron-Sulfur Acid Spring	TESQVFEDEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKLCAKSLISQVYDLLARHRVEGKPPLP*
Ga0074063_116362332	3300006953	Soil	QILEDEALTGAKSADHPTEEMSERRDHSRNQIGKVRIELCGKPFILQV*
Ga0099791_103037171	3300007255	Vadose Zone Soil	VQSQQLPTESQVFEDEVLPGTESAHQPAEEMSERHNHGKNCSGKIRIQSFTKSFILQVYD
Ga0099793_100153401	3300007258	Vadose Zone Soil	ESQVFEDEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKRYAKSLILQVYDLLARQCLANDS*
Ga0099793_100647372	3300007258	Vadose Zone Soil	VQSQQLPTESQVFEDEVLPGTESAHQPAEEMSERHDHGKDSSGKIRIQSFAKSFILQVYDVLAKHRGVRRASER*
Ga0116105_11232662	3300009624	Peatland	MAGSLRVQSQQLLTETQVFEDEILPRTESADHPTEEMSERHDHGKNLIGTVRIELLAKSWILRVYDVLARHSLTLY
Ga0126373_126045051	3300010048	Tropical Forest Soil	LRVQSQQLLMESQVLEDEVLAGAESAEQPAEQMSERRDHNRNHIEKVRIELCAKSFILQVYDGLARHSRKNAE*
Ga0074046_101572331	3300010339	Bog Forest Soil	RVQSQQLLMKSQVFEDEVLAGAETADHPPDEMPERQDHGKNIIGKVRINPGAKSFILCVYDVLARYTTTYFTVLNQY*
Ga0074045_101782222	3300010341	Bog Forest Soil	VQSQQLPTESQVLDDEVLPGTESADQPAEEMSERHDHDKNFSGKIRIQSFTKSFILQVYDVLERLTGS*
Ga0126379_137462291	3300010366	Tropical Forest Soil	MQSQQLPTESQVLEDEVLPGTESADQPAEEMSKRHNHGKNYSGKNLNPVFRKSFILRVY
Ga0137364_100709912	3300012198	Vadose Zone Soil	MARSLRVQSQQLSTESQVFEDEVLARTASAEHPSEEMSERHDHSKNLIGTIQIQLFAKSFILRVYDVLARHRITGPVFRRRRHTEAFENSS*
Ga0137364_114725191	3300012198	Vadose Zone Soil	MARSLRVQSQQLSTESQVFEDEVLARTASAEHPTEEMSERHDHSKNLIGTIRIQLFAKSFILQVYDVLARHRVRGMADSN
Ga0137382_100017022	3300012200	Vadose Zone Soil	VQSQQLPTESQVFEDEVGPATERTDQPAEEMSERHDDGKNFSGNDRIKLCAKSFISQVYDLLARHRWVYVIGRPGSQNGNPG*
Ga0137382_109310121	3300012200	Vadose Zone Soil	MARSLRVQSQQLPTESQVFEDEVLAGTASAEHPTEEMSERHDHSKNLIGTIRIQLFAKSFILQ
Ga0137363_103735604	3300012202	Vadose Zone Soil	MGQSTARSLRVQSQQLPMESQVFEDEVRPATERTDQPAEEMSERHDHGKNFSGKDRIKPCAKSFISQVY
Ga0137363_116883671	3300012202	Vadose Zone Soil	MARSLRVQSQQLSTESQVFEDEVLARTASAEHPTEEMSERHDHSKNLIGSIRIQLFAKSFIL
Ga0137399_100941942	3300012203	Vadose Zone Soil	VQSQQLPTESQVFEDEVLPGTESAHQPVEEMSERHDHGKDSSGKIRIQPFAKSFILQVYDVLAKHRSNFSNSFSFN*
Ga0137399_105764972	3300012203	Vadose Zone Soil	VQGSQSTARSLRVQCQQLPTESHVFEDEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKLYAKSLISQVYD
Ga0137362_108800601	3300012205	Vadose Zone Soil	LRVQCQQLPTESHVFEGEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKLYAKSLILQVYDRLARHSIPITGSGMMAITIPG*
Ga0137362_115544031	3300012205	Vadose Zone Soil	VQGSQSTARSLRVQSQQLPTESHVFEDEVRPATERTDQPAEEMSERHDHGKNFSGKDRIKPCAKSFISQVYDLLARH
Ga0137381_102180752	3300012207	Vadose Zone Soil	LRVQSQQLPTESHVFEDEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKLYSKSLISQVYDLLARHSDSV*
Ga0137378_108168382	3300012210	Vadose Zone Soil	LRVQCQQLPTESHVFEDEVRPATERTDQPAEEMPERHDHGKNFGGKDRIKLYAKSLISQVYDLLARIKSRAVPVPVTTT
Ga0137387_101938891	3300012349	Vadose Zone Soil	RSLRVQSQQLPTESQVFEGEVHPATERTDQPAEEMSERHDHGKNFSGKDRIKPCAKSFISQVYDLLARHNPLINER*
Ga0137384_108377252	3300012357	Vadose Zone Soil	LRVQCQQLPTERHVFEDEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKLYAKSLISQVYDLLARQNVV*
Ga0137385_108932772	3300012359	Vadose Zone Soil	VQSQQLSTESQVFEDEVLARTASAEHPTEEMSERHDHSKNLIGTIRIQLFAKSFILQVYDVLARHSTKNWLRCAGVGC
Ga0137390_109916081	3300012363	Vadose Zone Soil	MQSQQLPTESQVFEDEVLAGTASAGHPAEEMSERHDHSKNLIGTIRIQLFSRSFILPVYDVLARHGP*
Ga0137358_102490863	3300012582	Vadose Zone Soil	VFEDEVRPATERTDQPAEEMSERHDHGKNFSGKDRIKPCAKSFISQVYDLLARHTRRYL*
Ga0137358_109440861	3300012582	Vadose Zone Soil	VQGSQSTARSLLVQSQQLPTESQVFEDEVRPATERTDQPAEEMSERHDHGKNFSGKDRIKPCAK
Ga0137398_100216735	3300012683	Vadose Zone Soil	VQGQQLPTKSQVFEDEVLARTASAEHPTEEMSERHDHSKNLIGTIRIQLFAKSFILQVYDVLARHTICWKR*
Ga0137398_108723541	3300012683	Vadose Zone Soil	VQSQQLPTKSQVFGDEVLAGPESAGYPAEEMSEGHDHCKNVSGKDRIKLCAKSFISQVYD
Ga0137394_100457941	3300012922	Vadose Zone Soil	MARSLRVQSQQLPTESQVFEDEVLAGAASAEHPTEEMSERHDHSKNLIGTIRIQHFAKSFIVKMYDVLARHSTPLALFTA*
Ga0137394_104461562	3300012922	Vadose Zone Soil	MARSLRVQSQQLPTESQILEDEVLARTASAEHPTEEMSERHAHIKNLIETIRIQLFAKSFILQVYDVLARHNLPSVLLACSARITFL*
Ga0137359_103486581	3300012923	Vadose Zone Soil	VQGSQSTARSLRVQSQQLPTESQVFEDEVLPATESADHPPEEMSERRDHSKNFSGKARIELCAKSFILWVYEV
Ga0137359_117060632	3300012923	Vadose Zone Soil	LRVQCQQLPTESHVFEGEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKLYAKSLILQVYDRLARHS
Ga0137419_101475961	3300012925	Vadose Zone Soil	LRVQRQQLPTESQVFEDEVRPATERTDQPAEELSERHDHGKNFSGKDRIKPCAKSFISQVYDFLAA*
Ga0137416_120123561	3300012927	Vadose Zone Soil	LRVQCQQLPTESHVFEDEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKLYAKSLISQVYDL
Ga0137404_101620102	3300012929	Vadose Zone Soil	VFEDEVRPATERTDQPAEEMSERHDHGKHFSGKDRIKPCAKSFISQVDDLLAS*
Ga0181523_103691862	3300014165	Bog	QSQQLPTESQVFEDEVLPGPESADHPPKEVPERHDHGKNLIGKVRIELCAKSFILRVYDVLARHNARPDLESGLHS*
Ga0137405_12502502	3300015053	Vadose Zone Soil	VFEDEVRPATERTDQPAEEMPERHDHGKNFSGKDRIELCAKSLISLVYDLLARHSTH*
Ga0137420_13415558	3300015054	Vadose Zone Soil	VQGSQSTARSLRVQSQQLPMESQVFEDEVRPATERTDQPAEEMSERHDHGKNFSGKDRIKPCAKSFISQVCDLLAA*
Ga0137418_100589101	3300015241	Vadose Zone Soil	DEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKRYAKSLILQVYDLLARQCLANDS*
Ga0132258_110348932	3300015371	Arabidopsis Rhizosphere	VQSQQLPTESQVLEDEVLPGTENADQPAEEMSERYDHGKNFSGKIRIQPFAKSFILQVYDAL*
Ga0132256_1022758572	3300015372	Arabidopsis Rhizosphere	LLRVQSQQLPTESQVLEDEVLPGMESADQPAEEMSKRHNHGKNFIGKVRIQFCAKSLILWVYDVL
Ga0182038_108463951	3300016445	Soil	VAHVTTEESTARLLRVQSQQLPTESQVLEDEVLPGTENADQATEEMSERHDHRRNYIGKVRIELCAKSFILRVYDDAL
Ga0187802_100559092	3300017822	Freshwater Sediment	MQSQQLPTESQVLEDEVLPGMESADQPTEEMSERRDHTNNLTETVQTRLCAKSFILQVYDAL
Ga0187818_104205921	3300017823	Freshwater Sediment	VQSQQLPTERQVFEDEVLPGTEGADHPAEKMSERRDHRKNLTGTVQIQLCANSFRLQVYDVLARHSRLW
Ga0187801_100800271	3300017933	Freshwater Sediment	ESQVLEDEVLPGTENADQPTEEMSERHDHSRNYIGKVRIELSAKSFILQVYVLAKQCDQK
Ga0187848_100731321	3300017935	Peatland	MAGSLRVQSQQLLTETQVFEDEILPRTESADHPTEEMSERHDHGKNLIGTVRIELLAKSWILRVYDVLARH
Ga0187879_103683792	3300017946	Peatland	MAGSLRVQSQQLLTETQVFQDEVLPRTESADHPPEEMPKRQDHGKNLIGTVRIELLAKSCILRVYDVLARHTPLVQPGQGRGV
Ga0187817_104539911	3300017955	Freshwater Sediment	MQRQQLPTESQVLEDEVLPGTENADQPTEEMSERHDHSRNYIGKVRIELCAKSFILQVYDDAL
Ga0187817_109663192	3300017955	Freshwater Sediment	LRVQSQQLPTESQVFEDEVLAGTESADHPAEEMSKRGDHAKNLTGTVEIQLYAKSFILQVYDVLASHT
Ga0187816_104829502	3300017995	Freshwater Sediment	SQPLLAESQVLEDEFLPGTESADQPAEEMSERRDHSRNHIGKVRIELCAKSFILQVYDDA
Ga0179592_100017221	3300020199	Vadose Zone Soil	MGQSTARSLRVQSQQLPMESQVFEDEVRPATERTDQPAEEMSERHDHGKNFSGEDRIKPCAKSF
Ga0210403_100198644	3300020580	Soil	VQSQQLPTESQVFEDEVLPGTDSAHQPAEEMSERHDHVKDSSGKIRIQSLAKSFILQVYDVLARRSHLLSH
Ga0210399_105026221	3300020581	Soil	LVESQILEDEVLAGAKSADHPTEEMSERRDYSRNQIGKVRIELCGKPFILQV
Ga0210399_107959272	3300020581	Soil	VQSQQLLTQRQVFEEEALPGPQSADHPPEEMPEPHDHGKNLIGTVGIELFTKSYILRGYDVLARHRYATASGALVLVNSRIAD
Ga0210401_102629751	3300020583	Soil	QQLPTESQVFENEVLPGTESAHQPAEEMSERHDHGKDSSGKIRIQSLAKSFILQVYDVLARHTASQRPEVLPSSCWNP
Ga0210401_105824671	3300020583	Soil	VQSQRLLVESQILEDEVLAGAKSADHPTEEMSERRDHSRNQIGKVRIELCGKPFILQVYERCTGVRSDSATK
Ga0210404_101521891	3300021088	Soil	VQSQRLLVESQILEDEVLAGAKSADHPTEEMSERRDHSRNQIGKVRIELCGKPFILQVYERCTTPVLA
Ga0210406_101175161	3300021168	Soil	RLLRVQRQQLPTESQVLEDEVLPGTENADQPTEKMSERHDHSRNYIGKVRIELCAKSFILQVYDVLTRHRFAGTHPQC
Ga0210405_106100101	3300021171	Soil	MKSQVFKDEVLTGTESTDQPAEEMSERRDDSRNHIGKVRIELCAKSFILQVYDVLARHRFKACVKI
Ga0210408_102747501	3300021178	Soil	VQSHQLPTESQVFKDKVLAGTESADQPAEEISERHDHGNNLIGKFRIKAFAKSFILQLYDVLGEILRIN
Ga0210396_102667171	3300021180	Soil	SQQLPTESQVLEDEVLPGTENADQPTEEMSKRHDHGKNFSGKIRIQLFAKSLILQVYDVLGRHNQSQGARGSILSMI
Ga0210385_102138784	3300021402	Soil	VQSQQLPTESQVLEDEVLPGTENVEQPAEEMSKRHDHGKNFSGKIRIELCAKSFILQVYDVLAKHNLS
Ga0210397_102905123	3300021403	Soil	VQSQRLLVESQILEDEVLAGAKSADHPTEEMSERRDHSRNQIGKVRIELCGKPFILQVYERCTTPV
Ga0210387_106553312	3300021405	Soil	VQRQQLPTKSQVFEDEVAGTESAGYPTEEMSERHDHGKNFSGKDRIKLCAKSFISEVYDLLARYRYVTIVAYESYTYDSSYR
Ga0210384_100067249	3300021432	Soil	VRVQSQQLPTESQVLEDELCPAVETTDQPAEEMPERHDHGKNFSGKDRIKPCAKSFIL
Ga0210384_100168371	3300021432	Soil	RSLRAQSQQLPAESQVFKDEVLAGTESADYPAEEMSERRDHGKNFGGKARIQLLAKSLIL
Ga0210384_112867552	3300021432	Soil	RVQSQQLPTESQVFEDEVLAGTESADYPAEGMSERHDHGKNFSRKDRIKLCAKSFISQVYDLLARHSGSVRTWAGPIQEVNI
Ga0210392_100256727	3300021475	Soil	VQSQQLLTQRQVFEKEALPGPQSADHPPEEMPEPHDHGKNLIGTVGIELFTKSYILRGYDVLARHRYATASGALVLVNSRIAD
Ga0210402_105598161	3300021478	Soil	TARLLRVQRQQLPTESQVLEDEVLPGTENADQPTEKMSERHDHSRNYIGKVRIELCAKSFILQVYDVLTRHRFAGTHPQC
Ga0210409_100703944	3300021559	Soil	LRVQSQQLPTESQVLEDEVLPGTENADQPTEEMSKRHDHGKNFSGKIRIQLFAKSLILQVYDVLGRHNQSQGARGSILSMI
Ga0210409_102985102	3300021559	Soil	FVQGSQSTARSLRVQSQQLPTERHVFEDEILPGMESADQPAEEMSERHDHGKNFSGKIRIQPFAKSFILQVYDAL
Ga0207663_107023941	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RVQSQQLPTESQVLEDEVLPGTENADQPTEEMSERHDHGRNYVGKVRIELCAKSFILQVYAVLARLAHGFVKF
Ga0209131_11842233	3300026320	Grasslands Soil	ESHVFEDEVRPATERTDQPAEEMPERHDHGKNFSGKDRIELCAKSLISLVYDLLARHSTH
Ga0209377_12480962	3300026334	Soil	LRVQSQQLPTESHVFEDEVRPATERTDQPAEEMPERHDHDKNFSGKDRIELCAKSLISLVYDLLARHNQ
Ga0209804_10147062	3300026335	Soil	MQSQQLPTESQVFEDEVLAGTASAGHSKNLIGTIRIQLFSRSFILPVYDVLARHGP
Ga0209160_11596241	3300026532	Soil	VQCQQLPTESHVFEGEVRPATERTDQPAEEMPERHDHGKNFSGKDRIKLYAKSLISLVYDLLAR
Ga0209648_101394852	3300026551	Grasslands Soil	ARLLRVQSQQLPTESQVLEDEVLPGMESADQPAEEMSERHNHGKNCSGKIRIQSFTKSFILQVYDAL
Ga0208859_10029992	3300027069	Forest Soil	VQSQQLPTESQVLEDEVLPGTENADQPTEEMSERHDHSRNSIGKVRIELCAKSFILQVYDVLAREWL
Ga0207506_10058961	3300027460	Soil	RLLRVQSQQLPTESQVLEDEVLTGTENADQPTEEMSKRHDHGKNCSGKIRIELCAKSFILQVYDVLARHSLTVIEY
Ga0209220_10505191	3300027587	Forest Soil	VQSQQLPTESQVFEDEVRPATERTDQPAEEMSERHDHGKNFSGKDRIQLCAKSFISQVYDLLARHRT
Ga0209446_11920241	3300027698	Bog Forest Soil	SSARSLRVQSHQLPTESQIFEDEVLAGAKSADHPAEEMSERRDHRKNVIGIIRIQLFAKSFILQVYGVLARHRRRKI
Ga0209656_100178542	3300027812	Bog Forest Soil	VQSQQLPTESQVLDDEVLPGTESADQPAEEMSERHDHDKNFSGKIRIQSFTKSFILQVYDVLERLTGS
Ga0209415_109390041	3300027905	Peatlands Soil	MRVQSQQLPTESQVFEDEVLPGTESADHPAEKMSERHDHGLNLIGTLQVQRLAEPFILQVYDVLARHKGHSAM
Ga0209583_105654162	3300027910	Watersheds	VQSQQLPTESQVLEDEVLPGTETADQATEEMSERHDHSRNYIGKVGIELCAKSFILQVYDVLARHSLTGISSRHYAIVLAPDLRR
Ga0268266_104731882	3300028379	Switchgrass Rhizosphere	MQGSSSTARLLRVQSQQLPTESQVLEDEVLPETENADQPAEEMSERYNHSRNYIGKVRIELCAKSFILRVYDILA
Ga0137415_100541811	3300028536	Vadose Zone Soil	SQQLPTESQVFEDEVLPGTESAHQPAEEMSERHDHGKDSSGKIRIQSFAKSFILQVYDVLAKHSARRDSNSRPPA
Ga0075380_115491492	3300030851	Soil	VQSQQLPTESQVLEDEVLPGTENADQPTEEMSKRHDHGKNCSGKVRIELFAKSFILQVYDVLARH
Ga0170834_1004956891	3300031057	Forest Soil	RVQSQQLPTESQVLEDEVLPGTENADQPTEEMSKRHDPSRNYIGKVRIELCAKSFILQVYDVWRGTPLNGIFA
Ga0170824_1135174542	3300031231	Forest Soil	QQLPTESQVLEDEVLPGTENADQPAEEMSERYDHGKNFSAKIRIELCAKSFILQVYDVLARQCVQER
Ga0170818_1032225634	3300031474	Forest Soil	RLLRVQSQQLPTESQVLEDEVLPGTENAGQPTEEMSERHDHRPNYIGKVRIELFAKSFILQVYEVLARHRWVLSRDERKAN
Ga0307477_110762341	3300031753	Hardwood Forest Soil	VQSHQLPTESQVFKDKVLAGTESADQPAEEISERHDHGNNLIGKFRIKAFAKSFILQLYDVLARHCA
Ga0307475_112512082	3300031754	Hardwood Forest Soil	RQQLPTESQVLEDEVLPGTENADQPTEEMSERKDHSWNYIGKVGIELCAKSFILQVYDVLARQVEVN
Ga0307472_1011589551	3300032205	Hardwood Forest Soil	VQSQQLPTESQVLEDEVLPGTETADQPTEEMSERHDQSRNYIGKARIELCAKSFILQVYDAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075248

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences