Metagenome / Metatranscriptome Family F075303

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075303
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	119 residues
Representative Sequence	KGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKFIVWAVSPDMKFIKLGEIINTGGRNEAEIKSEVALPDFGLIVTMEGAEGETPIGPAVGTIHIVP
Number of Associated Samples	99
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.82 %
% of genes near scaffold ends (potentially truncated)	86.55 %
% of genes from short scaffolds (< 2000 bps)	88.24 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.916 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.924 % of family members)
Environment Ontology (ENVO)	Unclassified (49.580 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.588 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.26% β-sheet: 46.10% Coil/Unstructured: 49.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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SCOP family	SCOP domain	Representative PDB	TM-score
b.1.8.1: Cu,Zn superoxide dismutase-like	d1pzsa_	1pzs	0.68
b.1.8.0: Cu,Zn superoxide dismutase-like	d2jlpa_	2jlp	0.68
b.1.8.1: Cu,Zn superoxide dismutase-like	d2aqma_	2aqm	0.65
b.1.18.11: E set domains	d3ugua1	3ugu	0.65
b.1.8.0: Cu,Zn superoxide dismutase-like	d1xtma_	1xtm	0.64

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13365	Trypsin_2	10.08
PF13414	TPR_11	7.56
PF05193	Peptidase_M16_C	1.68
PF02769	AIRS_C	0.84
PF12891	Glyco_hydro_44	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.92 %
Unclassified	root	N/A	10.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.92 %
Unclassified	root	N/A	10.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.92 %
Unclassified	root	N/A	10.08 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	82.35 %
Unclassified	root	N/A	10.08 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	53.78 %
Unclassified	root	N/A	10.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.40 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.72 %

Name	Rank	Taxonomy	Distribution
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	53.78 %
Unclassified	root	N/A	10.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.40 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.88 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	53.78 %
Unclassified	root	N/A	10.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.88 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	53.78 %
Unclassified	root	N/A	10.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.40 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	4.20 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.68 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	53.78 %
Unclassified	root	N/A	10.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.40 %
unclassified Terriglobus	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus	4.20 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1.68 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	53.78 %
Unclassified	root	N/A	10.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.40 %
Terriglobus sp. TAA 43	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus → Terriglobus sp. TAA 43	4.20 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105861778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	634	Open in IMG/M
3300000891\|JGI10214J12806_12586295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300001139\|JGI10220J13317_12032132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	526	Open in IMG/M
3300001431\|F14TB_104977595	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	507	Open in IMG/M
3300003324\|soilH2_10057512	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300004463\|Ga0063356_103844474	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	647	Open in IMG/M
3300004479\|Ga0062595_100956103	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300004480\|Ga0062592_102302241	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	538	Open in IMG/M
3300005093\|Ga0062594_100779504	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005331\|Ga0070670_100072302	All Organisms → cellular organisms → Bacteria	2962	Open in IMG/M
3300005335\|Ga0070666_10629359	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300005356\|Ga0070674_100948430	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	752	Open in IMG/M
3300005440\|Ga0070705_100507208	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005444\|Ga0070694_100861266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	746	Open in IMG/M
3300005543\|Ga0070672_100076302	All Organisms → cellular organisms → Bacteria	2677	Open in IMG/M
3300005545\|Ga0070695_100088708	All Organisms → cellular organisms → Bacteria	2060	Open in IMG/M
3300005545\|Ga0070695_101169586	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300005545\|Ga0070695_101263398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	609	Open in IMG/M
3300005564\|Ga0070664_100295487	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300005564\|Ga0070664_100398081	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005564\|Ga0070664_101489989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300005578\|Ga0068854_101411412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus → Terriglobus sp. TAA 43	630	Open in IMG/M
3300005578\|Ga0068854_102155299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	515	Open in IMG/M
3300005614\|Ga0068856_101118348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300005614\|Ga0068856_102428523	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus → Terriglobus sp. TAA 43	531	Open in IMG/M
3300005615\|Ga0070702_101021530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus → Terriglobus sp. TAA 43	656	Open in IMG/M
3300005618\|Ga0068864_101865484	Not Available	607	Open in IMG/M
3300005719\|Ga0068861_102062810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	570	Open in IMG/M
3300005875\|Ga0075293_1037214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus → Terriglobus sp. TAA 43	669	Open in IMG/M
3300006058\|Ga0075432_10460161	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300006058\|Ga0075432_10484994	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300006169\|Ga0082029_1427677	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300006175\|Ga0070712_100412867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1117	Open in IMG/M
3300006796\|Ga0066665_11547959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	519	Open in IMG/M
3300006806\|Ga0079220_10624621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300006854\|Ga0075425_102436974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	580	Open in IMG/M
3300006854\|Ga0075425_102748101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus → Terriglobus sp. TAA 43	542	Open in IMG/M
3300006854\|Ga0075425_103135089	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300006876\|Ga0079217_11713642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	506	Open in IMG/M
3300006904\|Ga0075424_101981225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	615	Open in IMG/M
3300007004\|Ga0079218_11114309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	807	Open in IMG/M
3300007076\|Ga0075435_100169953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1839	Open in IMG/M
3300009093\|Ga0105240_11943437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	612	Open in IMG/M
3300009098\|Ga0105245_10964799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	896	Open in IMG/M
3300009100\|Ga0075418_10301038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1709	Open in IMG/M
3300009147\|Ga0114129_11204272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	943	Open in IMG/M
3300009148\|Ga0105243_12194888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	589	Open in IMG/M
3300009156\|Ga0111538_13637477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300009157\|Ga0105092_10820917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300009162\|Ga0075423_12657170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	548	Open in IMG/M
3300009162\|Ga0075423_12754423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	538	Open in IMG/M
3300009545\|Ga0105237_12605692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	516	Open in IMG/M
3300009551\|Ga0105238_10521654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1191	Open in IMG/M
3300009551\|Ga0105238_10671111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1047	Open in IMG/M
3300009553\|Ga0105249_10632519	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1127	Open in IMG/M
3300009553\|Ga0105249_12425714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	597	Open in IMG/M
3300010047\|Ga0126382_12150899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300010110\|Ga0126316_1151070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	508	Open in IMG/M
3300010375\|Ga0105239_11855982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	699	Open in IMG/M
3300010396\|Ga0134126_12655618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	544	Open in IMG/M
3300010397\|Ga0134124_10574767	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1100	Open in IMG/M
3300010399\|Ga0134127_12831630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	564	Open in IMG/M
3300010399\|Ga0134127_13128936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	540	Open in IMG/M
3300010401\|Ga0134121_10855271	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300010403\|Ga0134123_12266364	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300011119\|Ga0105246_11598016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300012022\|Ga0120191_10127465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300012360\|Ga0137375_10903862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	701	Open in IMG/M
3300013100\|Ga0157373_10446911	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	930	Open in IMG/M
3300013102\|Ga0157371_11476191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	530	Open in IMG/M
3300013306\|Ga0163162_10283873	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1787	Open in IMG/M
3300014325\|Ga0163163_12782134	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300014326\|Ga0157380_12940756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300015372\|Ga0132256_102210167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	655	Open in IMG/M
3300015373\|Ga0132257_103174462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	598	Open in IMG/M
3300015374\|Ga0132255_104077401	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	620	Open in IMG/M
3300018429\|Ga0190272_12317456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	579	Open in IMG/M
3300018465\|Ga0190269_11569085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	547	Open in IMG/M
3300018476\|Ga0190274_10812477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	993	Open in IMG/M
3300018476\|Ga0190274_12478388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	616	Open in IMG/M
3300021445\|Ga0182009_10425959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	689	Open in IMG/M
3300024251\|Ga0247679_1015628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1298	Open in IMG/M
3300024287\|Ga0247690_1029444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	632	Open in IMG/M
3300024290\|Ga0247667_1081103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	597	Open in IMG/M
3300025911\|Ga0207654_10140444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1539	Open in IMG/M
3300025911\|Ga0207654_11282670	Not Available	534	Open in IMG/M
3300025916\|Ga0207663_11425964	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300025924\|Ga0207694_10388166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1160	Open in IMG/M
3300025927\|Ga0207687_10937889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	741	Open in IMG/M
3300025933\|Ga0207706_10149807	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300025934\|Ga0207686_11469591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	562	Open in IMG/M
3300025940\|Ga0207691_11540972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	542	Open in IMG/M
3300025941\|Ga0207711_10158340	All Organisms → cellular organisms → Bacteria → Acidobacteria	2048	Open in IMG/M
3300025942\|Ga0207689_10380691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1175	Open in IMG/M
3300025960\|Ga0207651_11099069	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300026088\|Ga0207641_10864266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	897	Open in IMG/M
3300026095\|Ga0207676_12363451	Not Available	529	Open in IMG/M
3300026116\|Ga0207674_10392513	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1341	Open in IMG/M
3300026116\|Ga0207674_10435915	All Organisms → cellular organisms → Bacteria → Acidobacteria	1267	Open in IMG/M
3300026116\|Ga0207674_10898092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	854	Open in IMG/M
3300026116\|Ga0207674_10975658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	816	Open in IMG/M
3300026300\|Ga0209027_1235243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	587	Open in IMG/M
3300027775\|Ga0209177_10250732	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	654	Open in IMG/M
3300027909\|Ga0209382_11392730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	705	Open in IMG/M
3300028146\|Ga0247682_1047432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	773	Open in IMG/M
3300028381\|Ga0268264_12410939	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300030960\|Ga0102745_1000975	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	560	Open in IMG/M
3300031547\|Ga0310887_10614993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	667	Open in IMG/M
3300031548\|Ga0307408_100301134	All Organisms → cellular organisms → Bacteria → Acidobacteria	1343	Open in IMG/M
3300031731\|Ga0307405_10195747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1463	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.82%
Environmental	Environmental	41.18%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.82%
Terrestrial	Environmental → Terrestrial	39.50%
Aquatic	Environmental → Aquatic	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.49%
Freshwater	Environmental → Aquatic → Freshwater	1.68%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.92%
Loam	Environmental → Terrestrial → Soil → Loam	10.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.84%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.84%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.84%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.84%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.84%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010110	Soil microbial communities from Illinois, USA to study soil gas exchange rates - BV-IL-AGR metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030960	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058617781	3300000364	Soil	MLNIPAYKKGDDTKIKVDFTGALTGARANVFITPRKDGPTEVNMRFHDLKAAPADQKFIVWAVSPDMKFVKLGEVVNTPGRNEAEIKSETTLPDFGLIVTMESAVGETPVGPSVATIHIVP*
JGI10214J12806_125862952	3300000891	Soil	TGARANVFVTPRKDGPTEVKIRFHELKEAPAGQKFIVWAVSADNQFTKLGEIVNTGGRNEAEIKSEVALPDFGLIVTMESAVGAMPVGPAVGTIHIVP*
JGI10220J13317_120321321	3300001139	Soil	AGTYTAPLLNIPAYKTGDDTKIKVDFTGAMTGARANVFITPHKDKPTEVRLRFHDLKEAPAGQKFIAWAVGPDGTYQKLGEIVNTGGKNEAEIKTETALADFGLLVTMESAIGAAPAGPAVATIHIVP*
F14TB_1049775951	3300001431	Soil	LGVPGFKKGDDTKIKVDFSGALAGARANVFIQPEKGGATKVNMRFHDLKEAPAGQKFIVWAVGADGVFQKLGEVVNTGGKNEAEIKSETALADFGLVVTMESAIGDRPVGPAVAHIHIVP
soilH2_100575122	3300003324	Sugarcane Root And Bulk Soil	TFKKGDDTKIAVDFAGPLTGARANVFVTPHKGGATEVRMRFHDLKEAPSGQSFIVWAVGADGSYQKLGQIVNTGGRNEVEFKSETALQDFGLVITQEGTVGVSPVGPAVATITITPVP*
Ga0063356_1038444742	3300004463	Arabidopsis Thaliana Rhizosphere	AATTAPAGSSVAAGTYTAPLLNIPAYKKGDDTKIKVDFTGALTGARANVFITPHKDGPTEVNMRFHDLKAAAEGQSFIVWAVGADGTYQKLGQIVNTGDKNEAEIKAETALADFGLLITMEGTVGASPAGPAVATIHIIP*
Ga0062595_1009561032	3300004479	Soil	PLTGARANVFVTPHKGGATEVRMRFHDLKEAPAGQSFIVWAVGADGSYQKLGQIVNTGNRNEVEFKSETALPDFGLVITQEGTVGVSPVGPAVATITITPVP*
Ga0062592_1023022411	3300004480	Soil	APVQVTTTYTAPMLGVPTFKKGDDTKIKVDFSGALAGARANVFLTPHKGGATEVNIRFHDLKEAPAGKKFIVWAMGPDNTFTKVGEVVNTKGKNEAEIKSDVNMPDFGLLVTMEDADVPSPVGPGIAHIHIVP*
Ga0062594_1007795042	3300005093	Soil	KGDDTKIKVDFSGALEGARANVFITPHKDKATEVNLRFHDLKEAPAGQKFIVWAVGADGSFQKLGEVISTGGKNEAEIKTETALQDFGLVVTMESAIGVKPVGPAVAHIHIVP*
Ga0070670_1000723021	3300005331	Switchgrass Rhizosphere	DDTKIKVDFSGALEGARANVFITPHKDKATEVNLRFHDLKEAPAGQKFIVWAVGADGSFQKLGEVISTGGKNEAEIKTETALQDFGLVVTMESAIGVKPVGPAVAHIHIVP*
Ga0066388_1052641302	3300005332	Tropical Forest Soil	SGARANIFITPQKDGPTKVEMKFHDLKEAPAGQKFIAWAVGSGGEYMKLGEIVNTGGRNEAEIKTETTLPDFGLLITMESAVGASPVGPGVAHIHIVP*
Ga0070677_107830021	3300005333	Miscanthus Rhizosphere	AMSGARANVFITPEKGAPTKVELKFHDLKEAPAGQKFVAWAVGANGEYMKLGEVVTTGNRNEAQIKTETIMPDFGLLITMESAIGASPVGPGVAHIHIVP*
Ga0070666_106293592	3300005335	Switchgrass Rhizosphere	VDFTGAMTGSRANVFITPRKDGPTEVRVKFHELKDSPADQKFILWAVSPDNQFVKLGQVINTPGRNEAEIKSETSFPDFGLLITMESAIGESPVGPTVGVIHLVP*
Ga0070674_1009484301	3300005356	Miscanthus Rhizosphere	TKIKVDFSGAMSGARANVFITPEKGAPTKVELKFHDLKEAPAGQKFVAWAVGANGEYMKLGEVVTTGNRNEAQIKTETIMPDFGLLITMESAIGASPVGPGVAHIHIVP*
Ga0070701_109495291	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	RANVFITPRKDGPTKVEMRFHDLKEAPAGQKFVVWAVGANGEYAKLGEVVATGGHNEAEIKTETTMPDFGLLITMENAVGASPVGPGVAHIHIVP*
Ga0070705_1005072081	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	TFKKGDDTKIKVDFTGPLTGARANVFVTPHKGGATEVRMRFHDLKEAPAGQSFIVWAVGADGSYQKLGQIVNTGNRNEVEFKSETALPDFGLVITQEGTVGVSPVGPAVATITITPVP*
Ga0070694_1008612662	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	KIKVDFTGALQGARANVFITPRKDGPTEINMRFHDLKEAPTGQSFILWAAAPDGTFTKLGQIVNVKGRNEAEIKSETTLPDFGLVITMESAVGALPVGPAVGTITIVP*
Ga0070662_1000483093	3300005457	Corn Rhizosphere	FSGAMSGARANVFITPEKGAPTKVELKFHDLKEAPAGQKFVAWAVGANGEYMKLGEVVTTGNRNEAQIKTETIMPDFGLLITMESAIGASPVGPGVAHIHIVP*
Ga0070672_1000763021	3300005543	Miscanthus Rhizosphere	KKGDDTKIKVDFTGAMTGSRANVFITPRKDGPTEVRVKFHELKDSPADQKFILWAVSPDNQFVKLGQVINTPGRNEAEIKSETSFPDFGLLITMESAIGESPVGPTVGVIHLVP*
Ga0070695_1000887082	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AVTAPAGAPVVVSTAQGTQVAATATYTAPLLGIPTFKKGDDTKIKVDFAGPLSGARANVFVTPHKGAATEVRMRFHDLKEAPAGQKFIVWAVGPDGSYQKLGEVLNTGGHNESEFKAETVLPDFGLLITQEGEIGVSPIGPAVGTIHIIP*
Ga0070695_1011695861	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	IPGFKKGDDTKIKVDFTGAMSGARANVFITPRKDGPTKVEMRFHDLKEAPTGQKFVAWAVGANGEYVKLGEVVATGGHNEAEIKTETTLPDFGLLITMENAIGASPVGPGVAHIHIVP*
Ga0070695_1012633981	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	NIPAYKKGDDTKIKVDFSGALTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKFILWAAGADGTFQKLGEIVNTGSRNEAEIKSETTLPDFGLLITLEDAAAMSPVGPAVGVIHIVP*
Ga0070664_1002954871	3300005564	Corn Rhizosphere	AYKKGDDTKIKVDFSGALQGARANVFITPHKGGTTEVNIRFHDLKEAPAGQSFIVWAVSPDNKFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAVGAIPVGPAVGTIMIVP*
Ga0070664_1003980812	3300005564	Corn Rhizosphere	MTTNPSGETVGAVTAPAGAQVAAGTYTAPMLNIPAYKKGDDTKIKVDFSGALTGARANVFITPHKNGATEVKMHFHDLKEAPAGQKYVVWAVGADGTYQKLGEVVNTGGHNEAEFTAETPLPDFGLLLTQEGTIGASPVGPAIGTIHIIP*
Ga0070664_1014899891	3300005564	Corn Rhizosphere	DFSGAMSGARANVFITPRKDGPTKVEMRFHDLKEAPTGQKFVAWAVGANGEYVKLGEVVATGGHNEAEIKTETTLPDFGLLITMENAIGASPVGPGVAHIHIVP*
Ga0068854_1014114121	3300005578	Corn Rhizosphere	TTYTAPLLNIPAYKKGDDTKIKVDFTGAMTGARANIFITPRKDGPTEVNMRFHDLKEAPAGQKFIVWAVSPDMKFIKLGEIINTGGRNEAEIKSEVALPDFGLIVTMEGAEGETPIGPAVGTIHIVP*
Ga0068854_1021552991	3300005578	Corn Rhizosphere	KGDDTKIKVDFSGALSGARANVFITPQKGGATKVEMRFHDLKEAPAGQKFVVWAVGSAGEYMKLGEVVATGNKNEAEIKSETTLADFGLLVTLESAIGAAPVGPGVAHIHIVP*
Ga0068856_1011183482	3300005614	Corn Rhizosphere	LTGSRANVFITPRKDGPTEVRMRFHELKDAPAGQQFILWAVGPDNKYVKLGQIVNVAGRNEAEIKSETTLPDFGLLVTMEAPDVATPAGPSVATIHIIP*
Ga0068856_1024285231	3300005614	Corn Rhizosphere	AQTTTTYTAPMLNIPAYKKGDDTKIKVDFSGALQGARANVFITPHKGGATEVNIRFHDLKEAPAGQSFIVWAVSPDNKFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAVGAIPVGPAVGTIMIVP*
Ga0070702_1010215301	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TTYTAPLLNIPAYKKGDDTKIKVDFSGALQGARANVFITPHKGGPTEVNIRFHDLKEAPAGQSFIVWAVGPDNTFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMENAVGAIPVGPAVGTIMIVP*
Ga0068864_1018654841	3300005618	Switchgrass Rhizosphere	RANVFLTPHKGGATEVNIRFHDLKEAPAGKKFIVWAMGPDNTFTKVGEVVNTKGKNEAEIKSDVNMPDFGLLVTMEDADVPSPVGPGVAHIHIVP*
Ga0068861_1020628101	3300005719	Switchgrass Rhizosphere	TTYTAPLLNIPAYKKGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKFIVWAVSPDMKFIKLGEIINTGGRNEAEIKSEVALPDFGLIVTMEGAEGETPIGPAVGTIHIVP*
Ga0068870_114267771	3300005840	Miscanthus Rhizosphere	AMSGARANVFITPRKDGPTKVEMRFHDLKEAPTGQKFVAWAVGANGEYVKLGEVVATGGHNEAEIQTETTLPDFGLLITMENAIGASPVGPGVAHIHIVP*
Ga0075293_10372141	3300005875	Rice Paddy Soil	TTYTAPLLNIPAYKKGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNLRFHDLKEAPAGQKYIVWAVSPDMKFTRLGEIVNTGGRNEAEIKSEVAMPDFGLIVTMEGAEGETPIGPAVGTIHIVP*
Ga0075432_104601612	3300006058	Populus Rhizosphere	ALQGTRANVFITPHKGGATEVNIRFHDLKEAPKGQSFIVWAVSPDNQFTKLGQIVNTKGRNEAEIKSEVALSDFGLVITMEGAEGAIPVGPAVGTITIIP*
Ga0075432_104849941	3300006058	Populus Rhizosphere	GALSGARANVFIEPHKGGPTEVRMRFHDLKEAPAGSSFIVWAVGPDNTFTKLGQIVNTKDRNEAEIRSEVALADFGLVITMENAVGASPVGPAVGTITIVP*
Ga0082029_14276772	3300006169	Termite Nest	GALSGARANVFITPQKGGATKVEMRFHDLKEAPAGQKFVVWAVGSAGEYMKLGEVVATGNKNEAEIKSETTLADFGLLVTMESAIGASPVGPGVAHIHIVP*
Ga0070712_1004128671	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KGDDTKIKVDFAGPLSGARANVFVTPHKGAATEVRMRFHDLKEAPAGQKFIVWAVGPDGSYQKLGEVLNTGGHNESEFKAETVLPDFGLLITQEGEIGVSPIGPAVGTIHIIP*
Ga0066665_115479592	3300006796	Soil	GEKVSATTATVSPADAYTVPMLNIPAFKKGDDTKIKVNFTGALTGARANVFITPHKGGATELRVRFHELKEAPAEQVFVLWAVAPDSKFVKLGQIVNTGGRNEAEIKAETTLPDFGLLVTSEDTTKIGISPVGPRLADFMIVR*
Ga0079220_106246211	3300006806	Agricultural Soil	KIKVDFTGALSGARANVFITPRKDGPTKVEMRFHDLKEAPAGQKFVVWAVGANGEYAKLGEVVATGGHNEAEIKTETTMPDFGLLITMENAVGASPVGPGVAHIHIVP*
Ga0075425_1024369741	3300006854	Populus Rhizosphere	KGDESKIKVNFTGPLSGARANVFITPHKGGPTEVRVRFHELKEAAAGQAFILWAAAPNSSFVKLGQIVNTGGRNEAEIKAETTLPDFGLLITAEDASKIGVRPIGTRIGDFVIVP*
Ga0075425_1027481011	3300006854	Populus Rhizosphere	SGNTTIVVPMKETQTTYTAPMLNIPAYKKGDDTKIKVEFTGALQGTRANVFITPHKGGATEVNIRFHDLKEAPKGQSFIVWAVSPDNQFTKLGQIVNTKGRNEAEIKSEVALSDFGLVITMEGAEGAIPVGPAVGTITIIP*
Ga0075425_1031350891	3300006854	Populus Rhizosphere	GARANVFVTPHRGGATEVRMRFHDLKEAPAGQSFIVWAVGADGSYQKLGQIVNTGNRNEVEFKSETALPDFGLVITQESAVGTSPVGPAVGTIHIVP*
Ga0079217_117136421	3300006876	Agricultural Soil	PTGTSTVTGATYTAPLLNIPAFKKGDETKIKVDFTGALTGARANVFIEPKKGGPTEVRMRFHDLKEAPAGQHFIVWAVGADGSYQKLGHLVNTGGKNEAEIKAETVLPDFGLLLTMEGSEVMKPVGPAVATITIVP*
Ga0075424_1019812251	3300006904	Populus Rhizosphere	FKKGDDTKIKVDFTGPLTGARANVFVTPHKGGATEVRMRFHDLKEAPAGQSFIVWAVGADGTYQKLGQIVNTGGRNEVEFKSETALPDFGLLITSESAVGVSPVGPAIATIHITPIP*
Ga0079218_111143091	3300007004	Agricultural Soil	TAPVAAAPAGVVASTYTAPLLGIPSFKKGDDTKIKVDFSGALSGARANVFITPAKDGPTKVELKFHDLKEAPAGKKFIAWAVGANGEYVKLGEVISTGGKNEAEIKSETALADFGLLITMEEAVGAAPVGPGVAHIHIVP*
Ga0075435_1001699532	3300007076	Populus Rhizosphere	LNIPAFKKGDESKIKVNFTGPLSGARANVFITPHKGGPTEVRVRFHELKEAAAGQAFILWAAAPNSSFVKLGQIVNTGGRNEAEIKAETTLPDFGLLITAEDASKIGVRPIGTRIGDFVIVP*
Ga0105240_119434371	3300009093	Corn Rhizosphere	MTETKTTYTAPLLNIPAYKKGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKFIVWAVSPDMKFIKLGEIINTGGRNEAEIKSEVALPDFGLIVTMEGAEGETPIGPAVGTIHIVP*
Ga0105245_109647991	3300009098	Miscanthus Rhizosphere	KGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKFIVWAVSPDMKFIKLGEIINTGGRNEAEIKSEVALPDFGLIVTMEGAEGETPIGPAVGTIHIVP*
Ga0075418_103010382	3300009100	Populus Rhizosphere	MLGIPTFKKGDDTKIKVDFSGALSGARANVFITPQKGGATKVEMRFHDLKEAPAGQKFVVWAVGSAGEYMKLGEVVATGNKNEAEIKTETTLADFGLLVTMESAIGASPVGPGVAHIHIVP*
Ga0114129_112042722	3300009147	Populus Rhizosphere	GTAATYTAPMLNIPNYKKGDDTKIKVDFTGALTGARANVFITPRKDGPTEVRMRFHDLKAAPADQKFIVWAVSPDGKYVKLGQIVNAPGRNEAEIKAETTLPDFGLLVTMEGAEGEMPVGPGVATIHIIP*
Ga0105243_121948881	3300009148	Miscanthus Rhizosphere	KKGDDTKIKVDFSGAMEGARANVFITPHKDKATEVNLRFHDLKQAPSGKRFVAWAVGANGEYVKLGEVASTGNNNEAEIKSETVLPDFGLLITMEDTVGASPIGPGVAHIHIIP*
Ga0111538_136374771	3300009156	Populus Rhizosphere	YDTKIKVDFTGAMTGARANIFITPRKDGPTEVNMRFHDLKEAPAGQKFIVWAVSPDMKFIKLGEIINTGGRNEAEIKSEVALPDFGLIVTMEGAEGETPIGPAVGTIHIVP*
Ga0105092_108209171	3300009157	Freshwater Sediment	PTNPTTVVTPSGAVATTYTAPLLGIPGFKKGDDTKIKVDFSGALAGARANVFITPKKDGPTEINMRFHDLKEAPAGQKYIVWALGADGSFQKIGEVVNTGGKNEAEIKSETTLPDFGLVVTMESAIGDRPVGPAVAHIHIIP*
Ga0075423_126571701	3300009162	Populus Rhizosphere	PTDTYKVPMLNIPAFKKGDDTKIKINFTGALTGSRANISITPRKDGPTEVKLRFHEWKDAPAGKVFVLWGVGPDGKFQKLGQIVNTGGRNEAEIKGETAMPDFGLLVTLEDATKVGEMPAGARIGDFIITP*
Ga0075423_127544231	3300009162	Populus Rhizosphere	DTKIKVDFSGAMSGARANVFITPEKGAPTKVELKFHDLKEAPAGQKFVVWAVGANGEYAKLGEVVATGGHNEAEIKTETTLPDFGLLITLENAVGASPVGPGVAHIHIVP*
Ga0105237_126056921	3300009545	Corn Rhizosphere	TTVVIPMTETKTTYTAPLLNIPAYKKGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNLRFHDLKEAPAGQKFIVWAVSPDMKFIKLGEIINTGGRNEAEIKSEVALPDFGLIVTMEGAEGETPIGPAVGTIHIVP*
Ga0105238_105216541	3300009551	Corn Rhizosphere	MTETKTTYTAPLLNIPAYKKGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKFIVWAVSPDMKFIKLGEILNTGSRNEAEIKSEVALPDFGLIVTMEGAEGDTPIGPAVGTIHIVP*
Ga0105238_106711112	3300009551	Corn Rhizosphere	GATTYSAPLLGIPTFKKGDDTKIAVDFAGPLTGARANVFVTPHRGGATEVRMRFHDLKEAPAGQSFIVWAVGADGSYQKLGQIVNTGNRNEVEFKSETALPDFGLVITQEGTVGVSPVGPAVATIHITP*
Ga0105249_106325192	3300009553	Switchgrass Rhizosphere	YKKGDDTKIKVDFTGAMTGSRANVFITPRKDGPTEVRVKFHELKDSPADQKFILWAVSPDNQFVKLGQVINTPGRNEAEIKSETSFPDFGLLITMESAIGESPVGPTVGVIHLVP*
Ga0105249_124257141	3300009553	Switchgrass Rhizosphere	MKETQTTYTAPMLNIPAYKKGDDTKIKVEFTGALQGTRANVFITPHKGGATEVNIRFHDLKEAPKGQSFIVWAVSPDNQFTKLGQIVNTKGRNEAEIKSEVALSDFGLVITMEGAEGAIPVGPAVGTITIIP*
Ga0126382_121508991	3300010047	Tropical Forest Soil	VDFSGALSGARANIFITPQKDGPTKVEMKFHDLKEAPAGQKFIAWAVGSGGEYMKLGEIVNTGGRNEAEIKTETTLPDFGLLITMESAVGASPVGPGVAHIHIVP*
Ga0126316_11510701	3300010110	Soil	TIVVPTAQTTTTYSAPMLNIPAYKKGDDTKIKVDFSGALQGARANVFITPHKGGATEVNIRFHDLKEAPAGQSFIVWAVSPDNKFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAVGAIPVGPAVGTIMIVP*
Ga0105239_118559821	3300010375	Corn Rhizosphere	NIPAYKKGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKYIVWAVSPDMKFTKLGEILNTGGRNEAEIKSEVAMPDFGLVVTMEGSEVETPIGPAVGTIHIVP*
Ga0134126_126556181	3300010396	Terrestrial Soil	MTETKTTYTAPLLNIPAYKKGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKFIVWAVSPEMKFTKLGEIVNTGGRNEAEIKSEVALPDFGLIVTMEGAEGETPVGPAVGTIHIVP*
Ga0134124_105747671	3300010397	Terrestrial Soil	MTETKTTYTAPLLNIPAYKKGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNLRFHDLKEAPAGQKFIVWAVSPDMKFTKLGEIVNTGGRNEAEIKSEVAMPDFGLIVTMEGAEGETPIGPAVGTIHIVP*
Ga0134127_128316301	3300010399	Terrestrial Soil	TTPTAVVTPSGAVATTYTAPLLGIPAFKKGDDTKIKVDFSGALAGARANVFITPDKSGTTEVNMRFHDLKEAPAGQKYIVWAVGADGSFQKIGEVVNTGGKNEAEIKSQTTLPDFGLVVTMESAIGDRPVGPAVAHIHIVP*
Ga0134127_131289361	3300010399	Terrestrial Soil	KVDFSGALQGARANVFITPHKGGATEVNIRFHDLKEAPAGQSFIVWAVSPDNTFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAVGAIPVGPAVGTIMIVP*
Ga0134121_108552712	3300010401	Terrestrial Soil	GARANVFITPHKGGATEVNIRFHDLKEAPAGQSFIVWAVSPDNKFTKLGQIVNTKDRNEAEIKSEVALADFGLIITMESAVGAIPVGPAVGTIMIVP*
Ga0134123_122663641	3300010403	Terrestrial Soil	DFSGALQGARANVFITPHKGGPTEVNIRFHDLKEAPAGQSFIVWAVGPDNTFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMEGTVGAIPVGPAVGTIMIVP*
Ga0105246_115980161	3300011119	Miscanthus Rhizosphere	KIKVDFTGAMTGARANVFLTPRKDGPTEVNLRFHDLKQAPAGQKFIVWAVSPDMKFTKLGEIVNTGGRNEAEIKSEVAMPDFGLIVTMEGAEGETPIGPAVGTIHIVP*
Ga0120191_101274651	3300012022	Terrestrial	NTPSGTTIVVPMTETKTTYSAPLLNIPSYKTGDDTKIKVNFSGALTGARANVFITPRKDGPTEIKMRFHDLKEAPAGQKYIVWAVGADGSFQKIGEVVNTGGKNEAEIMSQTTLPDFGLVVTMESAIGDKPVGPAVAHIHIVP*
Ga0137375_109038621	3300012360	Vadose Zone Soil	APVGEKVSASTTAGTTPASSYTVPMLNIPAYKKGDDTKIKVKFTGAMTAARANVFLTPRKDGPTEVRMRFHELKEAPSGQVYVLWAVSPDNKFVKLGQIVNAAGRNEAEIKAETALKDFGLLVTTEETAKMTGEVTTPFGPSVGIIEIIR*
Ga0157373_104469112	3300013100	Corn Rhizosphere	IPLRQNPSGEKVAAVAAPATTVAGTYTAPLLGVPNLKTGDDTKIKVDFTGALTGARANVFITPHKDKATEVKIAFHDLKEAPAGQKFIVWAVGADGAYQKLGEIVNTGGKNEAEFKTETALADFGLLLTMESAIGAAPAGPAVATIHIVP*
Ga0157371_114761911	3300013102	Corn Rhizosphere	TYSAPLLNIPSYKTGDDTKIKVDFTGALAGARANVFIKPRKDGPTEVNMRFHDLKEAPAGQSFILWAVYPDNKFIKLGQIVNTAGRNEAEIKSEVPLPDFGLVVTMESAVGEMPVGPAIGTIHIVP*
Ga0163162_102838732	3300013306	Switchgrass Rhizosphere	KIKVDFSGALEGARANVFITPHKDKATEVNLRFHDLKEAPAGQKFIVWAVGADGSFQKLGEVISTGGKNEAEIKTETALQDFGLVVTMESAIGVKPVGPAVAHIHIVP*
Ga0163163_127821341	3300014325	Switchgrass Rhizosphere	GDDTKIKVDFAGALSGARANVFIEPHKGGATEVRMRFHDLKEAPAGQSFIVWAVGADGSYQKLGQIVNTGNRNEVEFQSETALPDFGLVITQEGTVGVSPVGPAVGTIHIVP*
Ga0157380_129407561	3300014326	Switchgrass Rhizosphere	TKIKVDFTGALTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKYIVWAVSPDMKFTRLGEIVNTGGRNEAEIKSEVAMPDFGLIVTMESADGETPIGPAVGTIHIVP*
Ga0132256_1022101671	3300015372	Arabidopsis Rhizosphere	DDTKIKADFSGALQGARANVFITPHKGGPTEANIRFHDLKEAPAGQSFIVWAVGPDNTFTKIGQVVNTKDRNEAEIKSEVALADFGLVITMESALGAMPVGPAVGTITIVP*
Ga0132257_1031744621	3300015373	Arabidopsis Rhizosphere	TTAPAGTAVAVTTPEGTQVAAAGTYTAPLLNIPTFKKGDDTKIKVDFTGPLTGARANVFVTPHKGGATEVRMRFHDLKEAPAGQSFIVWAVGADGSYQKLGQIVNTGGRNEVEFKSETPLPDFGLLITSETAVGAAPVGPAIATISITPVP*
Ga0132255_1040774012	3300015374	Arabidopsis Rhizosphere	MLGIPTFKKGDDTKIKVDFSGALEGARANVFLTPHKGGATDVNIRFHDLKEAPAGKKFIVWAMGADNTFTKVGEIVNTGGKNEAEIKSQVAFADFGLLVTMEDADVAS
Ga0190272_123174561	3300018429	Soil	MLNIPGYKKGDDTKMKIKFGGAMTGARANVFITPRKDGPTEVKLRFHELKEAPAGQVLTVWAVSPDNTFVKPGQVVNTPGRNEAEVKSEVALGDFGLLVTMEDQKGTSATPLGPTIGVFEIVP
Ga0190269_115690851	3300018465	Soil	SAPGGAYTVPMINLPAYKKGDDTKMKIKFSGAMTGARANVFLTPRKDGPTEVKLRFHELTEAPSGKVYVLWAVSPDNKYVKLGQIVNTPGRNEAEIKSETTLTDFGLVVTMEGADADMPAGPSVAHIHIVP
Ga0190274_108124772	3300018476	Soil	PMTETKTTYSAPLLNIPNFKTGDDTKIKVDFTGALTGARANVFITPRKDGPTEIKMRFHDLKEAPAGQKFIVWAVSPDNQFTKIGEIVNTGGRNEAELRSEVTLPDFGLIVTMENAVGATPIGPAIGTIHIVP
Ga0190274_124783881	3300018476	Soil	TAPLLGVPAFKKGDDTKIKVDFTGALSGARANVFITPTKDGPTKVEMKFHDLKEGPTGKKFVAWAVGANGEYIKLGEVVNAGGRNEAELKSDVALADFGLLITMEDAIGASPVGPGVAHIHIVP
Ga0182009_104259591	3300021445	Soil	NIPAYKKGDDTKIKVDFSGTLTGARANVFITPHKNGATEVKMHFHDLKEAPAGQKYVVWAVGADGAYQKLGEVVNTGGHNEAEFTAETPLPDFGLLLTQEGTIGASPVGPAVATIHIIP
Ga0247679_10156281	3300024251	Soil	GALTGARANVFITPHKNAATEVRMRFHDLKDAPAGQKFIVWAVGSDGSYQKLGEVLNTGGHNEAEFKAETVLPDFGLLLTQEGTIGVSPVGPAVATIRIIP
Ga0247690_10294441	3300024287	Soil	DTKIKVDFTGALTGARANVFITPHKNAATEVRMRFHDLKDAPAGQKFIVWAVGSDGSYQKLGEVLNTGGHNEAEFKAETVLPDFGLLLTQEGTIGVSPVGPAVATIRIIP
Ga0247667_10811031	3300024290	Soil	QVADGTYTAPMLNIPAFKKGDDTKIKVDFTGALTGARANVFITPHKNAATEVRMRFHDLKDAPAGQKFIVWAVGSDGSYQKLGEVLNTGGHNEAEFKAETVLPDFGLLLTQEGTIGVSPVGPAVATIRIIP
Ga0207654_101404441	3300025911	Corn Rhizosphere	VDFTGALTGARANVFITPHKDKATEVKIAFHDLKEAPAGQKFIAWAVGPDGTYQKLGEIVNTGGKNEAEFKTETALADFGLLLTMESAIGAAPAGPAVATIHIVP
Ga0207654_112826701	3300025911	Corn Rhizosphere	EGARANVFITPHKDKATEVNLRFHDLKEAPAGQKFIVWAVGADGSFQKLGEVISTGGKNEAEIKTETALQDFGLVVTMESAIGVKPVGPAVAHIHIVP
Ga0207693_104495962	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VLFELPNVFVTPHKGAATEVRMRFHDLKEAPAGQKFIVWAVGPDGSYQKLGEVLNTGGHNESEFKAETVLPDFGLLITQEGEIGVSPIGPAVGTIHIIP
Ga0207663_114259642	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FAGPLSGARANVFVTPHKGAATEVRMRFHDLKEAPAGQKFIVWAVGPDGSYQKLGEVLNTGGHNESEFKAETVLPDFGLLITQEGEIGVSPIGPAVGTIHIIP
Ga0207694_103881661	3300025924	Corn Rhizosphere	VVVPMTETKTTYTAPLLNIPAYKKGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKFIVWAVSPDMKFIKLGEILNTGSRNEAEIKSEVALPDFGLIVTMEGAEGDTPIGPAVGTIHIVP
Ga0207687_109378892	3300025927	Miscanthus Rhizosphere	KGDDTKIKVDFTGAMTGARANVFITPRKDGPTEVNMRFHDLKEAPAGQKFIVWAVSPDMKFIKLGEIINTGGRNEAEIKSEVALPDFGLIVTMEGAEGETPIGPAVGTIHIVP
Ga0207706_101498071	3300025933	Corn Rhizosphere	GDDTKIKVDFSGAMSGARANVFITPEKGAPTKVELKFHDLKEAPAGQKFVAWAVGANGEYMKLGEVVTTGNRNEAQIKTETIMPDFGLLITMESAIGASPVGPGVAHIHIVP
Ga0207686_114695911	3300025934	Miscanthus Rhizosphere	MLNIPAYKKGDDTKIKVDFSGALQGARANVFITPHKGGATEVNIRFHDLKEAPAGQSFIVWAVSPDNTFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAVGAIPVGPAVGTIMIV
Ga0207691_115409721	3300025940	Miscanthus Rhizosphere	MLNIPAYKKGDDTKIKVDFSGALQGARANVFITPHKGGATEVNIRFHDLKEAPAGQSFIVWAVSPDNKFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAVGAIPVGPAV
Ga0207711_101583403	3300025941	Switchgrass Rhizosphere	TVVVPMTETQTTYTAPMLNIPAYKKGDDTKIKVDFSGALQGARANVFITPHKGGTTEVNIRFHDLKEAPAGQSFIVWAVSPDNKFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAVGAIPVGPAVGTIMIVP
Ga0207689_103806911	3300025942	Miscanthus Rhizosphere	VVTNPSGNTTIVVPMTETKTTYTAPMLNIPAFKKGDETKIKVDFSGALQGARANVFVEPHKGGPTAVTIRFHDLKEAPAGQSFIVWAVGPDNTFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAIGAMPVGPAVGTITIVP
Ga0207651_110990691	3300025960	Switchgrass Rhizosphere	DQSRFSGALQGARANGFITPHKGGATEVNIRFHDLKEAPAGQSFIVWAVSPDNTFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAVGAIPVGPAVGTIMIVP
Ga0207640_109623251	3300025981	Corn Rhizosphere	SGAMSGARANVFITPEKGAPTKVELKFHDLKEAPAGQKFVAWAVGANGEYMKLGEVVTTGNRNEAQIKTETIMPDFGLLITMESAIGASPVGPGVAHIHIVP
Ga0207640_118988901	3300025981	Corn Rhizosphere	ALSGARANVFITPQKGGATKVEMRFHDLKEAPAGQKFVVWAVGSAGEYMKLGEVVATGNKNEAEIKSETTLADFGLLVTLESAIGAAPVGPGVAHIHIVP
Ga0207641_108642661	3300026088	Switchgrass Rhizosphere	ATSPSGNTTIVVPTAQTTTTYTAPMLNIPAYKKGDDTKIKVDFSGALQGARANVFITPHKGGATEVNIRFHDLKEAPAGQSFIVWAVSPDNKFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAVGAIPVGPAVGTIMIVP
Ga0207676_109299911	3300026095	Switchgrass Rhizosphere	FITPRKDGPTEVRVRFHELKDSPADQKFVLWAVSPDNQFVKLGQVINTPGRNEAEIKSETSFPDFGLLITMESAIGESPLGPAVGVIHILP
Ga0207676_123634511	3300026095	Switchgrass Rhizosphere	ALAGTRANVFLTPHKGGATEVNIRFHDLKEAPAGKKFIVWAMGPDNTFTKVGEVVNTKGKNEAEIKSDVNMPDFGLLVTMEDADVPSPVGPGVAHIHIVP
Ga0207674_103925132	3300026116	Corn Rhizosphere	MLNIPAYKNGDDTKIKVDFSGALTGARANVFITPHKNGATEVKMHFHDLKEAPAGQKYVVWAVGADGTYQKLGEVVNTGGHNEAEFTAETPLPDFGLLLTQEGTIGASPVGPAIGTIHII
Ga0207674_104359152	3300026116	Corn Rhizosphere	VDFSGALQGARANVFITPHKGGPTEVNIRFHDLKEAPAGQSFIVWAVGPDNTFTKIGQVVNTKDRNEAEIKSEVALADFGLVITMESAIGAMPVGPAVGTITIVP
Ga0207674_108980921	3300026116	Corn Rhizosphere	LLNIPAYKKGDDTKIKVDFTGALQGARANVFITPHKGGPTEVNIRFHDLKEAPAGQSFIVWAVSPDNKFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMESAVGAMPVGPAVGTIMIV
Ga0207674_109756581	3300026116	Corn Rhizosphere	YKKGDDTKIKVDFSGALQGARANVFITPHKGGPTEVNIRFHDLKEAPAGQSFIVWAVGPDNTFTKLGQIVNTKDRNEAEIKSEVALADFGLVITMEGTVGAIPVGPAVGTIMIVP
Ga0209027_12352431	3300026300	Grasslands Soil	APMLNIPNFKKGDDTKIKVDFTGALTGARANVFITPHRGGPTEVRMRFHDLKEAPAGQKFIVWAVSPDNQYTKLGEIVNTGGRNEAEFKAETSLPDFGLLVTMEGAEGVSPVGPTVGTIHIIP
Ga0209177_102507321	3300027775	Agricultural Soil	ATTEPAGSQVTVTTPAGTQVAAGATTYSAPLLGIPTFKKGDDTKIAVDFAGPLAGARANVFVTPHRGGATEVRMRFHDLKEAPAGQSFIVWAVGADGSYQKLGQIVNTGNRNEVEFKSETALPDFGLVITQEGTIGTSPVGPAVGTIHIVP
Ga0209382_113927301	3300027909	Populus Rhizosphere	LLNIPAFKKGDDTKIKVDFTGALSGARANIFITPHKGGSTEVNMRFHDLKEAPAGSSFIVWAVGPDNTFTKIGQIVNTKDRNEAEIKSEVALADFGLVITMENAVGAIPVGPAVGTITIV
Ga0247682_10474321	3300028146	Soil	DGTYTAPMLNIPAFKKGDDTKIKVDFTGALTGARANVFITPHKNAATEVRMRFHDLKDAPAGQKFIVWAVGSDGSYQKLGEVLNTGGHNEAEFKAETVLPDFGLLLTQEGTIGVSPVGPAVATIRIIP
Ga0268264_124109391	3300028381	Switchgrass Rhizosphere	ALQGARANVFITPHKGGATEVNIRFHDLKEAPAGQSFIVWAVSPDNKFTKLGQIVNTKDRNEAEIKSEVALADFGLIITMESAVGAIPVGPAVGTIMIVP
Ga0102745_10009751	3300030960	Soil	MTETKTTYSAPLLNIPNFKTGDDTKIKVDFTGALTGARANVFITPRKDGPTEIKMRFHELKEAPAGQKFIVWAVSADNQFTKIGEIVNTGGRNEAEIRSEVTLADFGLIVTMENAVGAMPVGPAIGTIHIVP
Ga0310887_106149931	3300031547	Soil	GGVVATQYTAPLLGVPGFKKGDDTKIKVDFSGAMSGARANVFITPEKGAPTKVELKFHDLKEAPAGQKFVAWAVGANGEYMKLGEVVTTGNRNEAQIKTETIMPDFGLLITMESAIGASPVGPGVAHIHIVP
Ga0307408_1003011341	3300031548	Rhizosphere	KVDFTGALTGARANVFIEPKKGGPTEVTMRFHDLKEAPAGQHFIVWAVGADGSYQKLGELMNTGGKNEAEIKSQTVLPDFGLVITQEGSMVAKPVGPAVATITITP
Ga0307405_101957472	3300031731	Rhizosphere	YSAPLLNIPTFKKGDETKIKVDFTGALTGARANVFIEPKKGGPTEVTMRFHDLKEAPAGQHFIVWAVGADGSYQKLGELMNTGGKNEAEIKSQTVLPDFGLVITQEGSMVAKPVGPAVATITITP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075303

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences