Metagenome Family F075385

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075385
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	85 residues
Representative Sequence	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDY
Number of Associated Samples	93
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.03 %
% of genes near scaffold ends (potentially truncated)	51.26 %
% of genes from short scaffolds (< 2000 bps)	89.08 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.025 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.370 % of family members)
Environment Ontology (ENVO)	Unclassified (35.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.622 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 82.72% β-sheet: 0.00% Coil/Unstructured: 17.28%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00196	GerE	2.52
PF01527	HTH_Tnp_1	1.68
PF04542	Sigma70_r2	1.68
PF05063	MT-A70	0.84
PF05199	GMC_oxred_C	0.84
PF01844	HNH	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.68
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.68
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.68
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	1.68
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.68
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.03 %
All Organisms	root	All Organisms	36.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.03 %
cellular organisms	root	All Organisms → cellular organisms	36.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.37 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	10.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.03 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	12.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.03 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.08 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	4.20 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.03 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.08 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	4.20 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16472783	Not Available	1312	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101653655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	854	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101655790	Not Available	737	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101657013	Not Available	562	Open in IMG/M
3300004479\|Ga0062595_100180101	Not Available	1278	Open in IMG/M
3300004479\|Ga0062595_100847693	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300004633\|Ga0066395_10112887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1328	Open in IMG/M
3300004643\|Ga0062591_102580673	Not Available	535	Open in IMG/M
3300005168\|Ga0066809_10187734	Not Available	553	Open in IMG/M
3300005174\|Ga0066680_10329464	Not Available	974	Open in IMG/M
3300005184\|Ga0066671_10004853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4858	Open in IMG/M
3300005184\|Ga0066671_11050247	Not Available	511	Open in IMG/M
3300005332\|Ga0066388_100650048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1669	Open in IMG/M
3300005332\|Ga0066388_102672849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300005332\|Ga0066388_104342401	Not Available	722	Open in IMG/M
3300005332\|Ga0066388_107547990	Not Available	545	Open in IMG/M
3300005332\|Ga0066388_108284366	Not Available	518	Open in IMG/M
3300005332\|Ga0066388_108787106	Not Available	501	Open in IMG/M
3300005434\|Ga0070709_10083031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2095	Open in IMG/M
3300005435\|Ga0070714_100680586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300005436\|Ga0070713_100254674	Not Available	1602	Open in IMG/M
3300005439\|Ga0070711_100119396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1948	Open in IMG/M
3300005471\|Ga0070698_101303035	Not Available	676	Open in IMG/M
3300005552\|Ga0066701_10477415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300005554\|Ga0066661_10596588	Not Available	656	Open in IMG/M
3300005559\|Ga0066700_10598636	Not Available	769	Open in IMG/M
3300005560\|Ga0066670_10053902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2097	Open in IMG/M
3300005560\|Ga0066670_10134122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1430	Open in IMG/M
3300005561\|Ga0066699_10384594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1004	Open in IMG/M
3300005587\|Ga0066654_10421795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300005764\|Ga0066903_100953106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1561	Open in IMG/M
3300005764\|Ga0066903_101942856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300005764\|Ga0066903_103108348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300005764\|Ga0066903_106626708	Not Available	603	Open in IMG/M
3300006028\|Ga0070717_11788175	Not Available	555	Open in IMG/M
3300006028\|Ga0070717_12152741	Not Available	501	Open in IMG/M
3300006046\|Ga0066652_100274490	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300006163\|Ga0070715_10079398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1485	Open in IMG/M
3300006175\|Ga0070712_101129787	Not Available	680	Open in IMG/M
3300006178\|Ga0075367_10550108	Not Available	733	Open in IMG/M
3300006854\|Ga0075425_101610116	Not Available	732	Open in IMG/M
3300006871\|Ga0075434_100190482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2071	Open in IMG/M
3300006904\|Ga0075424_102396078	Not Available	554	Open in IMG/M
3300009094\|Ga0111539_12849687	Not Available	560	Open in IMG/M
3300009162\|Ga0075423_11300902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300009792\|Ga0126374_10610607	Not Available	806	Open in IMG/M
3300010043\|Ga0126380_10269432	Not Available	1191	Open in IMG/M
3300010047\|Ga0126382_12540652	Not Available	500	Open in IMG/M
3300010335\|Ga0134063_10613370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300010358\|Ga0126370_11497328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300010360\|Ga0126372_11316282	Not Available	752	Open in IMG/M
3300010361\|Ga0126378_11679154	Not Available	722	Open in IMG/M
3300010361\|Ga0126378_11976965	Not Available	664	Open in IMG/M
3300010361\|Ga0126378_12546917	Not Available	584	Open in IMG/M
3300010366\|Ga0126379_11091495	Not Available	904	Open in IMG/M
3300010376\|Ga0126381_103727127	Not Available	596	Open in IMG/M
3300010398\|Ga0126383_11305332	Not Available	816	Open in IMG/M
3300010868\|Ga0124844_1070556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1285	Open in IMG/M
3300012200\|Ga0137382_10893312	Not Available	640	Open in IMG/M
3300012206\|Ga0137380_11743117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012929\|Ga0137404_10985192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300012948\|Ga0126375_11589942	Not Available	562	Open in IMG/M
3300012948\|Ga0126375_11994101	Not Available	513	Open in IMG/M
3300012971\|Ga0126369_11257058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	830	Open in IMG/M
3300013306\|Ga0163162_12396117	Not Available	607	Open in IMG/M
3300016270\|Ga0182036_10032992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3101	Open in IMG/M
3300016270\|Ga0182036_10425116	Not Available	1040	Open in IMG/M
3300016270\|Ga0182036_11383337	Not Available	589	Open in IMG/M
3300016294\|Ga0182041_10785122	Not Available	850	Open in IMG/M
3300016319\|Ga0182033_10016066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4409	Open in IMG/M
3300016319\|Ga0182033_10736814	Not Available	865	Open in IMG/M
3300016341\|Ga0182035_10827849	Not Available	813	Open in IMG/M
3300016371\|Ga0182034_11163606	Not Available	670	Open in IMG/M
3300016387\|Ga0182040_11704741	Not Available	538	Open in IMG/M
3300016445\|Ga0182038_11729806	Not Available	564	Open in IMG/M
3300018433\|Ga0066667_10967303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300018482\|Ga0066669_10335099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1248	Open in IMG/M
3300021560\|Ga0126371_10890327	Not Available	1034	Open in IMG/M
3300025885\|Ga0207653_10032212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1695	Open in IMG/M
3300025905\|Ga0207685_10197433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	943	Open in IMG/M
3300025906\|Ga0207699_10067308	All Organisms → cellular organisms → Bacteria → Proteobacteria	2177	Open in IMG/M
3300025915\|Ga0207693_10106565	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300025929\|Ga0207664_11013416	Not Available	744	Open in IMG/M
3300025961\|Ga0207712_11762500	Not Available	555	Open in IMG/M
3300026309\|Ga0209055_1258979	Not Available	539	Open in IMG/M
3300026550\|Ga0209474_10071465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2409	Open in IMG/M
3300027874\|Ga0209465_10638023	Not Available	525	Open in IMG/M
3300031543\|Ga0318516_10633857	Not Available	609	Open in IMG/M
3300031545\|Ga0318541_10004426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5786	Open in IMG/M
3300031545\|Ga0318541_10304627	Not Available	888	Open in IMG/M
3300031546\|Ga0318538_10048297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2069	Open in IMG/M
3300031561\|Ga0318528_10100572	Not Available	1517	Open in IMG/M
3300031573\|Ga0310915_10278355	Not Available	1180	Open in IMG/M
3300031573\|Ga0310915_10478029	Not Available	885	Open in IMG/M
3300031723\|Ga0318493_10116242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1357	Open in IMG/M
3300031736\|Ga0318501_10466771	Not Available	686	Open in IMG/M
3300031747\|Ga0318502_10292878	Not Available	956	Open in IMG/M
3300031764\|Ga0318535_10353656	Not Available	657	Open in IMG/M
3300031765\|Ga0318554_10417690	Not Available	761	Open in IMG/M
3300031779\|Ga0318566_10312653	Not Available	777	Open in IMG/M
3300031780\|Ga0318508_1036735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1261	Open in IMG/M
3300031796\|Ga0318576_10534874	Not Available	552	Open in IMG/M
3300031797\|Ga0318550_10037663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2117	Open in IMG/M
3300031799\|Ga0318565_10286330	Not Available	801	Open in IMG/M
3300031835\|Ga0318517_10298947	Not Available	727	Open in IMG/M
3300031897\|Ga0318520_10217390	Not Available	1132	Open in IMG/M
3300031897\|Ga0318520_10800306	Not Available	591	Open in IMG/M
3300031942\|Ga0310916_10500913	Not Available	1034	Open in IMG/M
3300031947\|Ga0310909_11187391	Not Available	617	Open in IMG/M
3300032025\|Ga0318507_10126937	Not Available	1079	Open in IMG/M
3300032025\|Ga0318507_10374250	Not Available	620	Open in IMG/M
3300032042\|Ga0318545_10062067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1277	Open in IMG/M
3300032060\|Ga0318505_10238375	Not Available	855	Open in IMG/M
3300032060\|Ga0318505_10476832	Not Available	589	Open in IMG/M
3300032063\|Ga0318504_10370300	Not Available	681	Open in IMG/M
3300032068\|Ga0318553_10180622	Not Available	1098	Open in IMG/M
3300032076\|Ga0306924_11813172	Not Available	635	Open in IMG/M
3300032261\|Ga0306920_100093688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4440	Open in IMG/M
3300032261\|Ga0306920_100936687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1264	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.28%
Host-Associated	Host-Associated	6.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.28%
Plants	Host-Associated → Plants	6.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.59%
Loam	Environmental → Terrestrial → Soil → Loam	22.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00169610	2088090014	Soil	MGAHGGFTKRRFLLMVSSCVLVGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVSDYEWIHKNLILQRARGYCPYDSPRTSMSAGE
INPhiseqgaiiFebDRAFT_1016536552	3300000364	Soil	MRSYGGLTKRRFLLWLSSCALIGTTQYEPTLADYIRESERVEAIRRLKLSRPTNEAKRLFVADYEWIEKNLILQRARGYCPYD*
INPhiseqgaiiFebDRAFT_1016557901	3300000364	Soil	MRSYGGLTKRRFLLMMSSCVLVGPTQYEPTLADYIRENERIEAIRRLKLSRLTNEAKRLFISDYEWIEKNLVLQRARGYCPYD*
INPhiseqgaiiFebDRAFT_1016570131	3300000364	Soil	MGRSQPLAHTRKARMRFYGGLTKRRFLLLLSSCALIGPTQYEPTLADYIRENERIEAIRRLKLSQPTNEAKRLFVSDYEWIAKNLTLQRARGYCPYDQPRTSMSAGE*
Ga0062595_1001801013	3300004479	Soil	MRFYGGLTKRRFLLLLSSCALIGPTQYEPTLADYIRENERIEAIRRLKLSQPTNEAKRLFVSDYEWIAKNLTLQRARGYCPYDQPRTSMSAGE*
Ga0062595_1008476932	3300004479	Soil	MGAHGGFTKRRFLLMVSSCVLVGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVSDYEWIHKNLILQRARGYCPYDSPRTSMSAGE*
Ga0066395_101128872	3300004633	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAVRRLKLSRPTDEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0062591_1025806731	3300004643	Soil	MGAHGGFTKRRFLLMVSSCVLVGPTQYEPTLADYIRENERIEAIRRLKLSRSTNEAKRLFVSDYEWIHKNLILQRARGYCPYDSPRTSMSAGE*
Ga0066809_101877341	3300005168	Soil	MAGLTKRRLLLLLSSRALIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0066680_103294641	3300005174	Soil	MAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHRE*
Ga0066671_100048534	3300005184	Soil	MRSHEGLTKRRFLLVMSSRVLIGPTQYEPTLTDYIRENERIEAIRRLKLSRPTKEAKRLFVSDYEWIAKNLILQRARGYCPYD*
Ga0066671_110502471	3300005184	Soil	MRSYGGLTKRRFLLLLSSCALIGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVSDYEWIAKNLTLQRARGYCPYDLPRTSMSADE*
Ga0066388_1006500482	3300005332	Tropical Forest Soil	MRSYGRLTKRRFLLMMSSCVLVGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVADYEWIRKNLVRQRARGYCPYDWPDTAKFEDHW*
Ga0066388_1026728492	3300005332	Tropical Forest Soil	MRSYRGLTKRRFLLLLSSCALIGPTQYEPTLADYIRESERIESLRRLKLSRPTNEAKRLFVDDYEWIRKNLILQRARGYCPYD*
Ga0066388_1043424012	3300005332	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAVRRLKLSRPTDEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNH
Ga0066388_1075479902	3300005332	Tropical Forest Soil	LLTRRARNCPYGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDARIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNH
Ga0066388_1082843661	3300005332	Tropical Forest Soil	MRSYGGLTKRRFLLMMSSCVLIGPAQYEPTLADYIRENERIEAIRRLKLSRPTNEAKKLFVSDYEWIAKNLTLQRARGYCPYDQPRTSMSAGE*
Ga0066388_1087871061	3300005332	Tropical Forest Soil	TKRRFLLLLSSCALIGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVSDYEWIAKNLTLQRARGYCPYDQPRTSMSAGE*
Ga0070709_100830311	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRSYGGLTKRRFLLMMSSCAVIGPTQYEPTLADYIRENERVEAIRRLKLSRPTNEAKGLFVSDYEWIRKNLVLQRARGYCPYDSPRTSMSAGE*
Ga0070714_1006805862	3300005435	Agricultural Soil	MRSYGGLTKRRFLLMMSSCAVIGPTQYEPTLADYIRENERVEAIRRLKLSRPTNEAKRLFVSDYEWIRKNLVLQRARGYCPYD*
Ga0070713_1002546743	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRSYGGLTKRRFLLMMSSWVLVGPTQYEPTLADYIRENERIETIRRLKLSRPTNEAKRLFVSDYEWIEKNLILQRARGYCPYDSPRTSMSAGE*
Ga0070711_1001193963	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MMSSCAVIGPTQYEPTLADYIRENERVEAIRRLKLSRPTNEAKRLFVSDYEWIRKNLVLQRARGYCPYD*
Ga0070698_1013030351	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	PNNLLLTRRARNCPMAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHRE*
Ga0066701_104774151	3300005552	Soil	MAGLTKRRLLLLLSSCAFIGAAEHDLTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHRE*
Ga0066661_105965882	3300005554	Soil	PNNLLLTRRARNCPMAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0066700_105986362	3300005559	Soil	MAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0066670_100539021	3300005560	Soil	MRSYGGLTKRRFLLMMSSCVLIGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVSDYDWIRVCTRIIY*
Ga0066670_101341223	3300005560	Soil	MRSYEGLTKRRFLLVMSSCVLIGPTQYEPTLTDYIRENERIEAIRRLKLSRPTKEAKRLFVSDYEWIAKNLILQRARGYCPYD*
Ga0066699_103845941	3300005561	Soil	TTCGEDTARVKSSPNNLLLTRRARNCPMAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0066654_104217952	3300005587	Soil	TKRRFLLVMSSCVLIGPTQYEPTLADYIRENERIEAIRRLKLSRPTKEAKRLFVSDYEWIAKNLILQRARAYCPYD*
Ga0066903_1009531062	3300005764	Tropical Forest Soil	VRSSGGLTKRRFLLLLSSCALIGPTQYEPTLADYIREDERIEAIRRLKLSRPTNEAKKLFVSDYEWIAKNLTLQRARGYCPYDQPRTSMSAGE*
Ga0066903_1019428561	3300005764	Tropical Forest Soil	RRRLLLLLSSCTLIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGYCPYDHAAPG*
Ga0066903_1031083483	3300005764	Tropical Forest Soil	MRSYVGLTKRRFLLLLSSCALIGPTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVSDYEWIRKNLVLQRARGYCPYD*
Ga0066903_1066267082	3300005764	Tropical Forest Soil	MRSYGRLTKRRFLLMMSSCVLVGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVADYEWIRKNLILQRARGYCPYD*
Ga0070717_117881751	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	SCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHRE*
Ga0070717_121527411	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	SCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDSAADTGPGNHR*
Ga0066652_1002744905	3300006046	Soil	MRSHEGLTKRRFLLVMSSRVLIGPTQYEPTLTDYIRENERIEAIRRLKLSRPTKEAKRLFVSDYEW
Ga0070715_100793981	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRSYGGLTKRRFLLMMSSWVLVGPTQYEPTLADYIRENERIETIRRLKLSRPTNEAKRLFVSDYEWIEKNLILQRA
Ga0070712_1011297871	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHRE*
Ga0075367_105501082	3300006178	Populus Endosphere	MRSYGGLTKRHFLLMMSSCVLVGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVSDYEWIEKNLILQRARGYCPYDKPRTSMSAGE*
Ga0075425_1016101162	3300006854	Populus Rhizosphere	MRSYGGLTKRRFLLMMSSCVLVGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVSDYEWIRKNLVLQRARGYCPYD*
Ga0075434_1001904823	3300006871	Populus Rhizosphere	MRSYGGLTKRRFLLMMSSCVLVGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVSDYEWIEKNLILQRARGYCPYDKPRTSMSAGE*
Ga0075424_1023960781	3300006904	Populus Rhizosphere	MRSFEGLTKRRFLLLLSSCALIGPTQYEPTLADYIRENERVEAIRRLKLSRLTNEARRLFVSDYEWIRKNLVLQRARGYCPYD*
Ga0111539_128496872	3300009094	Populus Rhizosphere	LTKRRFLLMMSSWVLVGPTQYEPTLADYIRENERIETIRRLKLSRPTNEAKRLFVSDYEWIEKNLIL*
Ga0075423_113009021	3300009162	Populus Rhizosphere	RMRSFEGLTKRRFLLLLSSCALIGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVSDYEWIEKNLILQRARGYCPYDKPRTSMSAGE*
Ga0126374_106106072	3300009792	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDARIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0126380_102694322	3300010043	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0126382_125406521	3300010047	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDY
Ga0134063_106133701	3300010335	Grasslands Soil	RFLLVMSSRVLIGPTQYEPTLTDYIRENERIEAIRRLKLSRPTKEAKRLFVSDYEWIAKNLILQRARGYCPYD*
Ga0126370_114973281	3300010358	Tropical Forest Soil	MRSYGGLTKRRFLLLLSSCALIGPTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVSDYEWIRKNLVLQRARGYCPYD*
Ga0126372_113162821	3300010360	Tropical Forest Soil	MRSYGGLTKRRFLLLLSSCALIGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0126378_116791541	3300010361	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAVRRLKLSRPTDEAKRLFVADYDWIAKNLILQRPRGHCPYDCAADTGPGNHR*
Ga0126378_119769651	3300010361	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLQLSRPTNEAKRLFVTDYDWIAKNLTLQRARGHCPYDYAADTGPGDYR*
Ga0126378_125469171	3300010361	Tropical Forest Soil	MRSYGGLTKRRFLLLLSSCALIGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVSDYEWIAKNLTLQRARGYCPYD
Ga0126379_110914951	3300010366	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRPNNEAKRLFVADYDWIAKNLILQRARGHCP
Ga0126381_1037271271	3300010376	Tropical Forest Soil	MRSYGGLTKRRFLLLLSSCALIGPTQYEPTLADYIRERERIEAIRRLKLSRPTNEAKKLFVADYDWIAKNLTLQRARGYCPYDQPRTSMSVGE*
Ga0126383_113053322	3300010398	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRPNNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0124844_10705561	3300010868	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIDAIRRLKLSRSTSEAKRLFVADYDWIAKNLILQRARGHCPYD*
Ga0137382_108933121	3300012200	Vadose Zone Soil	MAGLTKRRLLLLLSSCAFIGAAEHDLTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0137380_117431171	3300012206	Vadose Zone Soil	MAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRA
Ga0137404_109851922	3300012929	Vadose Zone Soil	MAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQR
Ga0126375_115899421	3300012948	Tropical Forest Soil	MRSYGGLTKRRFLLLLSSCALIGPTQYEPTLADYIRENERIEAIRRLKLSRPTNEAKRLFVADYEWIAKNLILQRARGYLSLPLARHGEV*
Ga0126375_119941011	3300012948	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVTDYDWIAKNLILQRARGHCPYDYAADTGPGNHR*
Ga0126369_112570581	3300012971	Tropical Forest Soil	MRSYVGLTKRRFLLLLSSCALIGPTQYEPTLADYIRENERIEAIRRLKLSRPTNESKRLFVADYEWIRKNLVLQRARGYCPYD*
Ga0163162_123961171	3300013306	Switchgrass Rhizosphere	VRMRSYGGLTKRRFLLMMSSWVLVGPTQYEPTLADYIRENERIETIRRLKLSRPTNEAKRLFVSDYEWIEKNLILQRARGYCPYDSPRTSMSAGE*
Ga0182036_100329926	3300016270	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQ
Ga0182036_104251161	3300016270	Soil	TRKARMRSYGGLTKRRFLLLLSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYDYAADAGPGNIE
Ga0182036_113833372	3300016270	Soil	MGGLTRRRLLLLLSSCTLIGAAEHELTLADYIREDERIEAIRRLKLSLPTNEAKRLFVADYDWIAKNLILQRA
Ga0182041_107851221	3300016294	Soil	MAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQ
Ga0182033_100160661	3300016319	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRA
Ga0182033_107368143	3300016319	Soil	MRSYGGLTKRRFLLLLSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCP
Ga0182035_108278491	3300016341	Soil	LLLLSSCTLIGAAEHELTLADYIREDERIEAIRRLKLSLPTNEAKRLFVADYDWIAKNL
Ga0182034_111636061	3300016371	Soil	MAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGH
Ga0182040_117047411	3300016387	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDY
Ga0182038_117298062	3300016445	Soil	MGGLTRRRLLLLLSSCTLIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGH
Ga0066667_109673032	3300018433	Grasslands Soil	MAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHRE
Ga0066669_103350992	3300018482	Grasslands Soil	MRSHEGLTKRRFLLVMSSRVLIGPTQYEPTLTDYIRENERIEAIRRLKLSRPTKEAKRLFVSDYEWMQKI
Ga0126371_108903272	3300021560	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAVRRLKLSRPTDEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR
Ga0207653_100322125	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MAGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHRE
Ga0207685_101974331	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRSYGGLTKRRFLLMMSSWVLVGPTQYEPTLADYIRENERIETIRRLKLSRPTNEAKRLFVSDYEWIEKNLILQRARGYCP
Ga0207699_100673082	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRSYGGLTKRRFLLMMSSCAVIGPTQYEPTLADYIRENERVEAIRRLKLSRPTNEAKGLFVSDYEWIRKNLVLQRARGYCPYD
Ga0207693_101065653	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDSAADTGPGNHR
Ga0207664_110134161	3300025929	Agricultural Soil	LRFLLMMSSWVLVGPTQYEPTLADYIRENERIETIRRLKLSRPTNEAKRLFVSDYEWIEKNLILQRARGYCPYDSPRTSMSAGE
Ga0207712_117625001	3300025961	Switchgrass Rhizosphere	MRSYGGLTKRRFLLMMSSWVLVGPTQYEPTLADYIRENERIETIRRLKLSRPTNEAKRLFVSDYEWIRKNLVLQRARGYCPYD
Ga0209055_12589791	3300026309	Soil	MAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYAADTGPGNHR
Ga0209474_100714655	3300026550	Soil	MRSHEGLTKRRFLLVMSSRVLIGPTQYEPTLTDYIRENERIEAIRRLKLSRPTKEAKRRFVSDYEWIAKNLILQRARGYCPYD
Ga0209465_106380232	3300027874	Tropical Forest Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAVRRLKLSRPTDEAKRLFVADYDWIAKNLIRQRALGHLPYDYAADTGPGN
Ga0318516_106338571	3300031543	Soil	MGGLTRRRLLLLLSSCTLIGAAEHELTLADYIREDERIEAIRRLKLSLPTNEAKRLFVADYDWIAKNLILQRAGGHCPYD
Ga0318541_100044261	3300031545	Soil	LSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYDYAADAGPGNIE
Ga0318541_103046272	3300031545	Soil	MGGLTRRRLLLLLSSCTLIGAAEHELTLADYIRENERIEAIRRLKLSQPTNEAKRLFVTDYDWIAKNLILQRARGHCPYDNAAPG
Ga0318538_100482972	3300031546	Soil	MRSYGGLTKRRFLLLLSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYDYAADAGPGNIE
Ga0318528_101005721	3300031561	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVADYDWI
Ga0310915_102783553	3300031573	Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRLTNEAKRLFVADYDWIAKNLILQRAGGHCPYD
Ga0310915_104780291	3300031573	Soil	MGGLTRRRLLLLLSSCTLIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKSLFVADYDWIAKNLILQRARGHCPYD
Ga0318493_101162421	3300031723	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLIL
Ga0318501_104667712	3300031736	Soil	MGGLTRRRLLLLLSSCTLIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEARSLFVADYDWIAKNLILQRARGHCPYD
Ga0318502_102928781	3300031747	Soil	SYGGLTKRRFLLLLSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYDYAADAGPGNIE
Ga0318535_103536563	3300031764	Soil	MRSYGGLTKRRFLLLLSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARG
Ga0318554_104176901	3300031765	Soil	MGGLTRRRLLLLLSSCTLIGAAEHELTLADYIRENERIEAIRRLKLSQPTNEAKRLFVTDYDWIAKNLILQRARGHCPY
Ga0318566_103126532	3300031779	Soil	SPFAYTRKARMRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYDYAADAGPGNIE
Ga0318508_10367354	3300031780	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYTAD
Ga0318576_105348741	3300031796	Soil	MGGLTRRRLLLLLSSCTLIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKSLFVADYDWIAKNLILQ
Ga0318550_100376634	3300031797	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYDYAADAGPGNIE
Ga0318565_102863301	3300031799	Soil	PFAHTRKARMRSYGGLTKRRFLLLLSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYDYAADAGPGNIE
Ga0318517_102989473	3300031835	Soil	MRSYGGLTKRRFLLLLSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYD
Ga0318520_102173901	3300031897	Soil	FAHTRKARMRSYGGLTKRRFLLLLSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYDYAADAGPGNIE
Ga0318520_108003061	3300031897	Soil	MGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAVRRLKLSRPTDEAKRLFVADYDWIAKNLILQRARGHCPYD
Ga0310916_105009134	3300031942	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNL
Ga0310909_111873911	3300031947	Soil	MAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRAR
Ga0318507_101269374	3300032025	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHCPYDYTA
Ga0318507_103742501	3300032025	Soil	LQGRGRTRSASPFAHTRKARMRSYGGLTKRRFLLLLSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYDYAADAGPGNIE
Ga0318545_100620671	3300032042	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGH
Ga0318505_102383751	3300032060	Soil	MGGLTRRRLLLLLSSCTLIGAAEHELTLADYIREDERIEAIRRLKLSLPTNEAKRLFVADYDWIAKNL
Ga0318505_104768322	3300032060	Soil	RFLLLLSSCVLIKSTQYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWIAKNLILQRARGYCPYDYAADAGPGNIE
Ga0318504_103703003	3300032063	Soil	LEIALMGGLTKRRLLLLLSSCALIGAAEHELTLADYIREDERIEAIRRLKLSRLTNEAKRLFVADYDWIAKNLILQRAGGHCPYD
Ga0318553_101806221	3300032068	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLLVADYDWI
Ga0306924_118131722	3300032076	Soil	GGLTRRRLLLLLSSCTLIGAAEHELTLADYIRENERIEAIRRLKLSQPTNEAKRLFVTDYDWIAKNLILQRARGHCPYDNAAPG
Ga0306920_1000936881	3300032261	Soil	MAGLTKRRLLLLLSSCAFIGAAEHELTLADYIREDERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHC
Ga0306920_1009366871	3300032261	Soil	MRSYGGLTKRRFLLLLSSCVLIRSTRYEPTLADYIRESERIEAIRRLKLSRPTNEAKRLFVADYDWIAKNLILQRARGHC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075385

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences