NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F075444

Metagenome / Metatranscriptome Family F075444

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075444
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 78 residues
Representative Sequence LKRLAGCIDRGLEVAREALTQVGHYVQDLRAVDGLLRPSDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFEP
Number of Associated Samples 103
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.03 %
% of genes near scaffold ends (potentially truncated) 94.96 %
% of genes from short scaffolds (< 2000 bps) 99.16 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.319 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(15.126 % of family members)
Environment Ontology (ENVO) Unclassified
(23.529 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.538 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 60.38%    β-sheet: 0.00%    Coil/Unstructured: 39.62%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF10551MULE 6.72
PF13565HTH_32 0.84
PF05055DUF677 0.84
PF12759HTH_Tnp_IS1 0.84
PF00834Ribul_P_3_epim 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0036Pentose-5-phosphate-3-epimeraseCarbohydrate transport and metabolism [G] 0.84

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.32 %
UnclassifiedrootN/A1.68 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_118180723All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300000956|JGI10216J12902_119599884All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300001431|F14TB_100691638All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300004267|Ga0066396_10018893All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300004463|Ga0063356_106308051All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300004633|Ga0066395_10617859All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300005167|Ga0066672_10664433All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300005181|Ga0066678_11041686All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005332|Ga0066388_100636712All Organisms → cellular organisms → Bacteria1683Open in IMG/M
3300005445|Ga0070708_100765624All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300005445|Ga0070708_101520286All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300005450|Ga0066682_10693503All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300005545|Ga0070695_101200545All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300005552|Ga0066701_10179770All Organisms → cellular organisms → Bacteria1289Open in IMG/M
3300005552|Ga0066701_10377265All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300005556|Ga0066707_10739604All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300005558|Ga0066698_10838136All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300005559|Ga0066700_10299809All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300005561|Ga0066699_11132363All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005764|Ga0066903_104210173All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300006034|Ga0066656_10360979All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300006049|Ga0075417_10651185All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300006846|Ga0075430_101802448All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300006853|Ga0075420_100862187All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300006969|Ga0075419_10125787All Organisms → cellular organisms → Bacteria1663Open in IMG/M
3300007788|Ga0099795_10583503All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300009012|Ga0066710_102937251All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300009012|Ga0066710_103061555All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300009089|Ga0099828_10415315All Organisms → cellular organisms → Bacteria1213Open in IMG/M
3300009094|Ga0111539_12938094All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300009143|Ga0099792_10604850All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300009147|Ga0114129_10501090All Organisms → cellular organisms → Bacteria1586Open in IMG/M
3300009156|Ga0111538_11881822All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300009157|Ga0105092_10547389All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300009162|Ga0075423_11074195All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300009792|Ga0126374_10302550All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300009808|Ga0105071_1035266All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300009813|Ga0105057_1004527All Organisms → cellular organisms → Bacteria1781Open in IMG/M
3300010041|Ga0126312_11018072All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300010043|Ga0126380_10320325All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300010145|Ga0126321_1271851All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300010303|Ga0134082_10427837Not Available569Open in IMG/M
3300010360|Ga0126372_12017425All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300010362|Ga0126377_10294112All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis1599Open in IMG/M
3300010366|Ga0126379_10481334All Organisms → cellular organisms → Bacteria1309Open in IMG/M
3300010376|Ga0126381_101551437All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300010391|Ga0136847_10855336Not Available741Open in IMG/M
3300010398|Ga0126383_10853993All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300010398|Ga0126383_12838857All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300010398|Ga0126383_13327620All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300012207|Ga0137381_11120400All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300012209|Ga0137379_11393998All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300012209|Ga0137379_11617401All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300012349|Ga0137387_10616842All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300012349|Ga0137387_10801835All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300012349|Ga0137387_10888339All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300012350|Ga0137372_10175857All Organisms → cellular organisms → Bacteria1731Open in IMG/M
3300012356|Ga0137371_10997017All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300012359|Ga0137385_10499580All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300012361|Ga0137360_11697215All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300012363|Ga0137390_10906220All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp.836Open in IMG/M
3300012410|Ga0134060_1407953All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300012917|Ga0137395_10643301All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300012944|Ga0137410_10491891All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300012971|Ga0126369_10766099All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300012975|Ga0134110_10184845All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300012976|Ga0134076_10256178All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300017659|Ga0134083_10148535All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300017792|Ga0163161_10912303All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300018076|Ga0184609_10345626All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300018466|Ga0190268_11555905All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300018482|Ga0066669_11419414All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300019259|Ga0184646_1590120All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300019767|Ga0190267_10584322All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300019869|Ga0193705_1008908All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales2192Open in IMG/M
3300020010|Ga0193749_1016766All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP1871432Open in IMG/M
3300021080|Ga0210382_10209463All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300025910|Ga0207684_10241430All Organisms → cellular organisms → Bacteria1558Open in IMG/M
3300025910|Ga0207684_10478521All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300025961|Ga0207712_10768499All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300025972|Ga0207668_10412908All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300026327|Ga0209266_1305442All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300027169|Ga0209897_1047302All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300027273|Ga0209886_1084541All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300027384|Ga0209854_1015897All Organisms → cellular organisms → Bacteria1198Open in IMG/M
3300027654|Ga0209799_1016723All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300027654|Ga0209799_1029156All Organisms → cellular organisms → Bacteria1222Open in IMG/M
3300027873|Ga0209814_10467044All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300027874|Ga0209465_10102256All Organisms → cellular organisms → Bacteria1406Open in IMG/M
3300027874|Ga0209465_10104847All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300027874|Ga0209465_10104859All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300027874|Ga0209465_10432439All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300027874|Ga0209465_10456347All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300027880|Ga0209481_10104923All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300027882|Ga0209590_10469702All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300027903|Ga0209488_10180841All Organisms → cellular organisms → Bacteria1591Open in IMG/M
3300027909|Ga0209382_11370188All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300027947|Ga0209868_1039971All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300027957|Ga0209857_1088121All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300027961|Ga0209853_1042261All Organisms → cellular organisms → Bacteria1292Open in IMG/M
(restricted) 3300027995|Ga0233418_10240139All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300028673|Ga0257175_1007888All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP1871535Open in IMG/M
3300028705|Ga0307276_10010800All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP1871621Open in IMG/M
3300028710|Ga0307322_10047638All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300028710|Ga0307322_10184130All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300028792|Ga0307504_10244228All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300028793|Ga0307299_10034934All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300028875|Ga0307289_10075796All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300030902|Ga0308202_1004463All Organisms → cellular organisms → Bacteria1678Open in IMG/M
3300030990|Ga0308178_1146120All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300030993|Ga0308190_1069741All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300031096|Ga0308193_1016409All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300031547|Ga0310887_10548468All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300031890|Ga0306925_11953740All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300031995|Ga0307409_102158037All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300032017|Ga0310899_10439710All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300032174|Ga0307470_10878077All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300032782|Ga0335082_10434560All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300034644|Ga0370548_152295All Organisms → cellular organisms → Bacteria500Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil15.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil9.24%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.24%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.40%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand6.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.20%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.52%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.68%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.84%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.84%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.84%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.84%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.84%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.84%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.84%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.84%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009808Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50EnvironmentalOpen in IMG/M
3300009813Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300027169Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027273Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027384Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027947Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027957Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027995 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MGEnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031096Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_11818072313300000956SoilLKRLAGCIDRGMEGAREALTQVGHYVQDLRAVDGLLKPSNEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFE
JGI10216J12902_11959988413300000956SoilLKRLASCIDRGLEVAREALTQVGHYVQDLRAVDGLLRPSDEATGEEREAQFVSLWQEWEAGVDPMHQQFAKVMSSFE
F14TB_10069163813300001431SoilLKRLAACIDRGLAVAREALKHVGQYIPDLRAVDSTLRASDEATEEERKAQFVTLWQAWEASADPVQQQFAKVMSSFAPGLFVGGEAADFPE
Ga0066396_1001889313300004267Tropical Forest SoilLLKRLAGCIDRGMEGAREVLTQVGHYGQDLRAVDSLLKPSDEATGAERETQFVALWQEWEASVDPMHQ
Ga0063356_10630805123300004463Arabidopsis Thaliana RhizosphereLKRLAGCIDRGLEVAREALTHMGHYGQDLRAVDGLLRPSDEATGEEREAQCVSLWQEWKAGVDPMHQQFAKVMSSCEPGVFVGGEGADLPADNWDVER
Ga0066395_1061785913300004633Tropical Forest SoilLKRLAGCIDRGMEGAREVLTHVGHYVQELRAVDGLLKPSDEATGEAREAQFVSLWQGWEASVDPIHQQFAKVMSSFEPGLFVGGEEADFPADNVDLER
Ga0066672_1066443323300005167SoilLKRLAGCIDRGMEGAREALTQVGHYVQDLRAVDNLLKPNDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGEEADFPAD
Ga0066678_1104168623300005181SoilLKRLVGCIDRGLDVAREALKQVTQYVRDLQAVDRTLRPSEEATGEEREGQFVSLREAWQASADPVHQQFAQVMSSFQPGLFVGGETA
Ga0066388_10063671223300005332Tropical Forest SoilLKRLAGCMDRGMEGAREALTHVGHYVQDLRAVDGLLKPSDEATGEEREAQFVSLWQEWEASVDPIYQQFAKVMS
Ga0070708_10076562423300005445Corn, Switchgrass And Miscanthus RhizosphereLLLKRLAGCIDRGLDVVRAALRQVGHYVKDLQAVESTLRPSDEATEAEREGQFVLRREAWPASAAPMHQPFAPVLSSVQLGVFVEGEAADCPEDHVAVERWCKRPT
Ga0070708_10152028613300005445Corn, Switchgrass And Miscanthus RhizosphereLTRLAGCIDRGLEVVRVPLTHVRAYVQDLQAVDSTLRPSDEATGQEREAACIALQQAWWASADPV
Ga0066682_1069350313300005450SoilLKRLAGCIDRGMEGAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGE
Ga0070695_10120054513300005545Corn, Switchgrass And Miscanthus RhizosphereLTRLGGCIDRGLDAAREPLTQVRAYVRELQAVDSTLRPSDEVTGREREERFRVLQEAWQSSADP
Ga0066701_1017977023300005552SoilLKRLVGCIDRGLDVAREALKQVAQYVKALQAVEKTLRPSEKATREEREGQFVSLREAWQASADPVHQQFAQVMRSFQPGLF
Ga0066701_1037726523300005552SoilLKRLAGCIDRGLEGAREAVTPVAHYVQDLRTVEGILKPNDEATGKEREAQFVSLWQEWEASVDP
Ga0066707_1073960413300005556SoilLKRLAGCIDRGLEGAREALTQVAHYVQDLRTVEGILKPNDEATGKEREAQFVSLWQEWEASVDPIHQQFAKVMSSFEPGLFVGGE
Ga0066698_1083813623300005558SoilLKRLVGCIDRGLDGAREALKQVTQYIKDLQAVESTLRPSEEATGEEREGQFVSLREAWQASADPVHQQFAQVMSSFQPGLFVGGE
Ga0066700_1029980923300005559SoilLKRLVGCIDRGLDGAREALKQVTQYIKDLQAVESTLRPREEATGEEREGQFVSLREAWQ
Ga0066699_1113236323300005561SoilLKRLAGCIDRGLEITREALTQVGHYVLDLQTVEGILKPSDEATGEEREAQFVSLWQEWEASVDPMHQQFAK
Ga0066903_10421017313300005764Tropical Forest SoilMEGAREALTQVGHDVQELRAVDGLLKPSDKATGEAREAQFVSLWQEWEASVDPIHQQLAKVMSSFEPGLFVGGE
Ga0066656_1036097923300006034SoilLKRLAGCIDRGMEGAREALTQVGHYVQDLRAVDGLLRPSDEAKGEEREAQFVSLREAWQASIDPMHQQFANVMSSFEPGLFVGRGGRFSSRQ
Ga0075417_1065118523300006049Populus RhizosphereLKRLAGCIDRGMKVAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREGQFVSLRQEWEASVDPMHQQFAKVMSSFEP
Ga0075430_10180244813300006846Populus RhizosphereLKRLAGCIDRGLEVAREALTQVGHYVQDLRAVDGILKPSDEATGEEREAQFVALWQEWGASVDPIHQQFAKVMSSFEPG
Ga0075420_10086218723300006853Populus RhizosphereLKRLAACIDRGLAVAREALQQVRQYSQDLRAVDSTLRPSDEATEEERQAQFVTLWQAWEASTDPVQQQFAKVMSSF
Ga0075419_1012578743300006969Populus RhizosphereLTRLAGCIDRGLDVVRGVLGQVGRFVKDLQAVESTLRPSDEATEEEREGQFVLLREAWQSSAAPM
Ga0099795_1058350313300007788Vadose Zone SoilLKRLAGCIDRGLAVAREALTQVGAYVQDLRAVDGILKPSDEATGEERETPFVSRWQEWEASVDPMHQQFAKVMSS
Ga0066710_10293725113300009012Grasslands SoilLKRLAGCIDRGLEVAREALTQVGHYVQDLRAVDGLLRPSDEATGEEREAQFVSLREAWQASIDPMHQQFAKVMSSFEPG
Ga0066710_10306155513300009012Grasslands SoilLKRLVGCIDRGLDGAREALKQVTQSIKDLQAVESTLRPREEATGEEREGQFVSLREAWQASADPVHQQFAQVMRS
Ga0099828_1041531533300009089Vadose Zone SoilLKRLAGCIDRGLAVAREALTQVGAYVQDLRAVDGILKPSDEATGEERETPFVSLWQEWEASVDPMHQQFAKVMSSF
Ga0111539_1293809423300009094Populus RhizosphereLTRLSGCIDRGLDAAREPLTQVRAYVRELQAVDSTLRPSDEVTGREREERFRVRQEAWQS
Ga0099792_1060485023300009143Vadose Zone SoilLTRLAGCIDRGLDVAREPLTQVRAYVRDLQAVDSTLRPNNEVTGREREVRFRVLQEAWQSSADPVY
Ga0114129_1050109013300009147Populus RhizosphereLKRLAGCIDRGMKVAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREGQFVSLRQEWEASVDPMHQQFAKVMSSFE
Ga0111538_1188182213300009156Populus RhizosphereLGQVGRFVKDLQAVESTLRPSDEATEEEREGQFVLLREAWQSSADPMHQQFAQVMSSFQPGLFVGGEAAEFPEDNLDWERWC
Ga0105092_1054738913300009157Freshwater SedimentLKRLAGCIDRGMEVAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREGQFVSLRQEWEASVDPMHQQFAKVMSSFEPGLFVGGEGADFPADGLDHGIGHYAQ*
Ga0075423_1107419513300009162Populus RhizosphereMEGAREALTQVEHYVQDLRAVDGLLKPSNEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFEPGLFV
Ga0126374_1030255013300009792Tropical Forest SoilLKRLVGCIDRGLEVAREALKQVTQYVKDLQAVERTLRPSEEATGEEREGQFVSLREAWQASADPVHQQLAQVMRSFQPGVFVG
Ga0105071_103526623300009808Groundwater SandVKRLVGCIDRGLDVAREALKHVAQYVKDLQAVDRTLRPSEEATGEEREGQCVLLREAWQASAD
Ga0105057_100452723300009813Groundwater SandMDRGLEGAREALTQVGHYVQDLRAVEGILKPNDEATGEEREAQFVALWQEWEASGDPIYQQFAKVMSSFEPGLF
Ga0126312_1101807223300010041Serpentine SoilLKRLAGCIDRGLEVACEALTQVGHDGQDLRAVDGLRRPSDEAPGEEREAQFVSLWQEWEASVDLMH*
Ga0126380_1032032513300010043Tropical Forest SoilLKRLVGGIDRGLDVAREALKQVTQYVKDLQAVDRTLRPSEEATGEEREGQFVSLREAWQASADPVHQQFAQVMRSF
Ga0126321_127185123300010145SoilLKRLGGCIDRGLDVAREALKQGAPYVKDLQAVDRTLRPSEEATGEEREGQCVSLREAWQASA
Ga0134082_1042783713300010303Grasslands SoilKRGRAESLLKRLVGCIDRGLDVAREALKQVAQYVKDLQAVESTLRPREEATGEEREGQFVSLREAWQASADPVH*
Ga0126372_1201742513300010360Tropical Forest SoilVLVKRLAGCIDRGLEVAREALTQVGHYVQELRAVDGLLKPSDAATGEEREAQFVALWQEWAASVDPMHQQLAKVMSSFAPGLFVGGEGAEVPADNVDLER
Ga0126377_1029411213300010362Tropical Forest SoilMAGAREALTQVGHYVQDLRAVDDLLKPSDGAPGAEREAQCVLLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGEEADFP
Ga0126379_1048133413300010366Tropical Forest SoilMEGAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREAQFVLLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGEEA
Ga0126381_10155143713300010376Tropical Forest SoilLKQVAQYVKDLQAVDSTLKPSEKATREEREGQFVSLREAWQASADPVHQQFAQVMSSFQPGLFVGGETADFPEDNLD
Ga0136847_1085533613300010391Freshwater SedimentMDRGLDVVRAALRHVGQYVKDLQAVESILRPSDEATGEEREGQFVLLREAWQSSADPMHQQFAQVMSSFQPG
Ga0126383_1085399313300010398Tropical Forest SoilMEGAREALTQVGHYVQDLRAVDGLLKPSNEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGEEADFP
Ga0126383_1283885713300010398Tropical Forest SoilLLKRLAGCIDRGLEGAREALTHVGHYVQDLRAVDALLKPSDAATGAEREAQCVALGQEWEASVDPMHQQFAK
Ga0126383_1332762013300010398Tropical Forest SoilMEGAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREAQFVLLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGEEAD
Ga0137381_1112040023300012207Vadose Zone SoilLKRLAGCIDRGLDVVRAALRQVGQYVKDLQAVESTLRPSDEATEEEREGQFVLLREAWQASADPMHQQFAQVM
Ga0137379_1139399813300012209Vadose Zone SoilMKRLAGCIDRGMKVAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREGQFVSLRQEWEASVDPMHQQFAKVMSSFEPGLF
Ga0137379_1161740113300012209Vadose Zone SoilMQRLAGWIARGMKVAREALTQVGHDVQDLRAVDGLLKPSDEATGEEREGQCVSLWQEWEASVDPMHQQFAKVMSS
Ga0137387_1061684213300012349Vadose Zone SoilMEGAREALTHVGHYVQDLRAVDNLLKPNDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFEPGL
Ga0137387_1080183523300012349Vadose Zone SoilMKVAREALTQVGHYVQDLRAVDGLLKPSDEATGEECEGQFVSLRQEWEASVDPMHQQFAKVMS
Ga0137387_1088833913300012349Vadose Zone SoilMDRGLDVVRAALRQVSHYVKGLQAVESTLRPSDEGTEAERGGQFVLLREAWQASADPMHQQFAQVMS
Ga0137372_1017585713300012350Vadose Zone SoilMQRLAGWIARGMKVAREALTQVGHDVQDLRAVDGLLKPSDEATGEEREGQCVSLWQEWEASVDPMHQQCAKVMSRCEPGVFVGGEGADFPAD
Ga0137371_1099701713300012356Vadose Zone SoilMKRLAGCMDRGMKVAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREVQFVSLWQEWEASVGPMPQPCSKVMSRCAPGVFVGGEGADFPADTWDVERW
Ga0137385_1049958013300012359Vadose Zone SoilMDRGMKVAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREVQFVSLWQEWEASVDPMHQQFAKVMSRFEPGVFVGGEGADFPADHWDVERWFTGPTGHERRMHG
Ga0137360_1169721523300012361Vadose Zone SoilLKRLAGCIDRGLEVAREALTQVGHYVQDLRAVDGLLRPSDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFA
Ga0137390_1090622023300012363Vadose Zone SoilLKRLASCIDRGLDVVRAALRQVSHYGKGLQAVESTLRPSDEATEEEREGQFVLLREAWQASADPMHQQFA*
Ga0134060_140795313300012410Grasslands SoilMEGAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFG
Ga0137395_1064330113300012917Vadose Zone SoilLKRLAGCIDRGMKVAREALTQVGHYVQDLRAVDGLLQPSDEATGEEREGQFVSLRQEWEASVDPMHQQFAKVMSSFQPGLFVGGEVADFPADNLD*
Ga0137410_1049189123300012944Vadose Zone SoilLKRLAGCIDRGMKVAREALTQVGHYVQDLRAVDGLLQPSDEATGEEREGQFVSLRQQWEASVDPMHQQFARVMSRFEPGLVVGGEGADVP
Ga0126369_1076609913300012971Tropical Forest SoilMEGAREVLTHVGHYVQELRAVDGLLKPSDEATGEAREAQFVSLWQGWEASVDPIHQQFAKVMSSFEPGLFVGGEEADFPADNVDLER
Ga0134110_1018484533300012975Grasslands SoilLKRLAACIDRGLAVAREALKHVGQYIPDLRAVDSTLRARDEATEEERKAQFVTLWQAWEASADPVQQQFAKVMSSFAP
Ga0134076_1025617823300012976Grasslands SoilLKRLAGCIDRGLEVAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFEPGLFVG
Ga0134083_1014853513300017659Grasslands SoilLKRLAGCIDRGLEGAREALTQVAHYVQDLRTVEGILKPNDEATGKEREAQFVSLWQEWEASVDPIHQQFAKVMSSFEPGLFVG
Ga0163161_1091230323300017792Switchgrass RhizosphereLKRLAGCIDRGLEVAREALTHVGHYGQDLRAVDGLLRPSDEAAGEEREAQCVSLWQEWKAGVDPIHQQFAKVMSSFEPG
Ga0184609_1034562623300018076Groundwater SedimentLKRLAGGLDRGLEGAREALTPGGDSVQDLRAVEGRLTPNDEATREEREAQCVSRWQEWEARVDPMHQPFAKVMSRVEP
Ga0190268_1155590523300018466SoilLKRLAGCIDRGREVAREALTQVGHYVQDLRAVDGLLRPSDETTGEEREAQFISLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGE
Ga0066669_1141941413300018482Grasslands SoilLKRLVGCIDRGLDVAREALKQVAQYVKALQAVENTLRPSEKATREEREGQFVSLREAWQASADPVHQQFAQVMRSF
Ga0184646_159012013300019259Groundwater SedimentVKRLAGCIDRGLDVVRTALQQVGQYAKDLQAVESILKPSDEATGEEREEQFVVLREAWQSSADPMHQQFAQVMSSFQPGVFVGGE
Ga0190267_1058432213300019767SoilLLKRLAACIDRGLAVAREALQQVRQYSQDLRAVDSTLRPSDEATEEERQAQFVTLWQAWEASTDPVQQQFAKVMSSFAPGL
Ga0193705_100890853300019869SoilMGGPKRGRAESLLKRLAGCIARGLEVTREVWTHVGRYVQDLRAVHGLLKPSDEATEEEREAQFVSLWQEWKSSADPMQQQFAKVMSSFEAGLFVGG
Ga0193749_101676633300020010SoilLKRLAGCIDRGLDVVRAALRQVGHYVKDLQAVESTLRPSDEATEEEREGQFVMLREAWQASADPMHQ
Ga0210382_1020946313300021080Groundwater SedimentLTRLAGCIDRGLDVAREPLTQVRAYVRELQAVDSTLRPSDEVTGREREVRFRVLQEAWQSSADPVY
Ga0207684_1024143023300025910Corn, Switchgrass And Miscanthus RhizosphereLKRLAGCIDRGLEVAREALTQVGHYVQDLRAVDGLLRPSDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFEP
Ga0207684_1047852123300025910Corn, Switchgrass And Miscanthus RhizosphereLKRLAGCIDRGLEITREALTQVGHYVLDLQTVDGILKPSDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSN
Ga0207712_1076849933300025961Switchgrass RhizosphereLKRLAGCIDRGLEVAREALTHVGHYGQDLRAVDGLLRPSDEATGEEREAQCVSLWQEWKAGVDPIHQQFAKVMSSGEPGVFVGGEGAD
Ga0207668_1041290833300025972Switchgrass RhizosphereLTRLGGCIDRGLDAAREPLTQVRAYVRELQAVDSTLRPSDEVTGREREERFRVLQEAWQSSA
Ga0209266_130544213300026327SoilLKRLAGCIDRGMEGAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGEEADFPADNVDLE
Ga0209897_104730213300027169Groundwater SandLKRLVGCIDRGLDVAREALKQVAQYVKDLQAVDRTLRPSAEATGEERERQFVSLREAWQASADPVHQQFAQVMSSFQP
Ga0209886_108454113300027273Groundwater SandVKRLVGCIDRGLDVAREALKQVAQYVKDLQAVDRTLRPSEEATGEEREGQCVLLREAWQASADPVHQPLA
Ga0209854_101589713300027384Groundwater SandVKRLVGCIDRGLDVAREALKQVAQYVKDLQAVDRTLRPSEEATGEEREGQCVLLREAWQASADPVHQQCAQVMNSFQPGGFVGGET
Ga0209799_101672313300027654Tropical Forest SoilLKRLADCIDRGMEGAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREAQFVLLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGEEADFPAD
Ga0209799_102915613300027654Tropical Forest SoilMEGAREALTQVGHYVQELRAVDGLLKPSDKATGEAREAQFVSLWQEWEASVDPIHQQFAKVMSSFEPG
Ga0209814_1046704423300027873Populus RhizosphereLKRLAGCIDRGMKVAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREGQFVSLRQEWEASVDPMHQQFAKVMSSFEPGLFV
Ga0209465_1010225613300027874Tropical Forest SoilLKRLAGCIDRGLEVAREALTQVGHYVQDLRTVDGLLKPSDEATGEEREAQFVSLGQEWEASVDPIHQQFAKVMSSFEPGLFVGGEEADF
Ga0209465_1010484713300027874Tropical Forest SoilLKRLADCIDRGMEGAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREAQFVLLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGE
Ga0209465_1010485923300027874Tropical Forest SoilMEGAREALTQVGHYVQDLRAVDGLLKPSNEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFEPGLFVGGE
Ga0209465_1043243923300027874Tropical Forest SoilLLKRLAGCIDRGMEGAREALTHVGHYVQELRAVDGLLKPSDAATGEEREAQFVALWQEWEASVDPIHQQFAKVMSS
Ga0209465_1045634723300027874Tropical Forest SoilLKRLAGCIDRGMEGAREVLTHVGHYVQELRAVDGLLKPSDEATGEAREAQFVSLWQGWEASVDPIHQQFAKVMSSFEPGLFVGGEEADF
Ga0209481_1010492313300027880Populus RhizosphereLTRLAGCIDRGLDVVRGVLGQVGRFVKDLQAVESTLRPSDEATEEEREGQFVLLREAWQSSAAPMHQQFAQV
Ga0209590_1046970223300027882Vadose Zone SoilLTRLEGCIDRGLEVVRGVLGQVGHYVKDLQAVESTLMPSAAATGEEREGQFVLLREAWQASADPMHQQFA
Ga0209488_1018084123300027903Vadose Zone SoilLKRLAGCIDRGLDVVRAALRQVGQYVKDLQAVESTLRPSDEATEEEREGQFVLLREAWQASADPMHQQFAQVMSRVVFQKWR
Ga0209382_1137018813300027909Populus RhizosphereLKRLAGCIDRGMEGAREALTQVEHYVQDLRAVDGLLKPSNEATGEEREAQFVSLWQEWEASVDP
Ga0209868_103997113300027947Groundwater SandLKRLAGCSDRGMKVAREALTQVGHYVQDLRAVDGLLKPSAGATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSS
Ga0209857_108812113300027957Groundwater SandLTRLAGCIDRGLDVARESLTHVRAYVRDLQAVDSTLRPSDEVTGREREGRFRVLQEAWQSSADPVYQHCATM
Ga0209853_104226123300027961Groundwater SandLTRLAGCIDRGLDVARESLTQVRAYVRDLQAVDSTLRPSDEVTGREREGRFRLLQEAWQSSADPVYQHV
(restricted) Ga0233418_1024013913300027995SedimentLKRLAGCIDRGMEVAREALTQVGHYVQDLRAVDGLLKPSDAATGEERETAFISMWQEWEASVDPIHQ
Ga0257175_100788813300028673SoilLQRLAGCIDRGLDSAREALKQVGHYVKDLRAVDQTLRSSDEATGEEREAQFVSLREAWQSSADPME
Ga0307276_1001080013300028705SoilLKRLAGCIDRGMEVAREALTQVGHYVQDLRAVDGLLKPSDEATGEKREAQFVALWQEWEASVDPIHQQFAKVMSSFEPGLFVGR
Ga0307322_1004763823300028710SoilLKRLAGCIARGLEVTREVWTHVGRYVQDLRAVHGLLKPSDEATEEEREAQFVSLWQEWKSSADPMQQQFAKVMSSFEAGLFVGGE
Ga0307322_1018413013300028710SoilLTRLASCIDRGLDVAREPLTQVRAYVRELQAVDSTLRPSDAVTGREREGRFRLLQEAWQASADPV
Ga0307504_1024422813300028792SoilLTRLAGCIDRGLDVAREPLTQVRAYVRDLQAVDSTLRPNNEVTGREREVRFRLLQEAWQSSADPVY
Ga0307299_1003493413300028793SoilLTRLVGCLDRGLDVAREPLTQVRSYVQDLKVVDSTLRPNDEATGQEREALFMRLREAWYTSTDPVHQHFAK
Ga0307289_1007579613300028875SoilLKRLAGCIARGLEVTREVWTHVGRYVQDLRAVHGLLKPSDEATEEEREAQFVSLWQEWKSSADPMQQQFAKVMSSFEAGLF
Ga0308202_100446323300030902SoilLTRLVGCLDRGLDVAREPLTQVRSYVQDLKVVDSTLRPNDEATGQEREALFMRLREAWYTSTDPV
Ga0308178_114612023300030990SoilLKRLVGCIDRGLDVAREVLKQVAQYVKDLQAVDRTLRPSEEATGEEREGQFVLLREAWQASADPVHQQFAQVMNSFQPGLFVGG
Ga0308190_106974113300030993SoilLKRLAGCIDRGLEITREALTQVGHYVLDLQTVDGILKPSDEATGEEREAQFVSLWQEWEASVDPMHQQFAKVMSSFQPGLFVGGEVADF
Ga0308193_101640913300031096SoilLKRLAGCIARGLEVTWEVWTHVGRYVQDLRAVHGLLKPSDEATEEEREAQFVSLWQEWKSSADPMQQQFAKVMSSFE
Ga0310887_1054846823300031547SoilLKRLAGCIDRGLEVAREALTHVGHYVQDLRAVDGLLRPSDEATGEEREAQFVSLWQEWKAGVEPIHQQ
Ga0306925_1195374023300031890SoilLKRLAGCIDRGMEGAREALTQVGHYVQELRAVDGLLKPSDKATGEAREAQFVSLWQEWEASVDPIHQQFAKVMSSFEPGLFVGGEEAEFPADNVD
Ga0307409_10215803713300031995RhizosphereLKRLGGCIDRGLDVAREALKQVAHYVKDLQAVDRTLRPSEEATGEEREGQFVSLREAWQASADPVHQ
Ga0310899_1043971023300032017SoilLKRLAGCIDRGREVAREALTQVGHYVQDLRAVDGLLRPRDETTGEEREAQFISLWQEWEASVDPMHQQFAKVMSGFEPGL
Ga0307470_1087807713300032174Hardwood Forest SoilLKRLGGCIDRGLAVAREALKQVAQYVKDLQAVDSTLRPSEKATGEEREGQFVSLREAWQASAEPVHQQLAQVMSSF
Ga0335082_1043456013300032782SoilMEGAREALTQVGHYVQDLRAVDGLLKPSDEATGEEREAQFVALWQEWEAGVDPMHQQFAKVMSSFEPGLFVGGEEVDFPADNV
Ga0370548_152295_254_4993300034644SoilLKRLAGCIDRGMEVAREALTQVGHYVQDLRAVDGLLKPSDEATGEKREAQFVALWQEWEASVDPIHQQFAKVMSSFEPGLFV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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