Metagenome Family F075585

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F075585
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	89 residues
Representative Sequence	HVRDTFAINDKAFFVMAGFSIEGEIVAGMLVRMPFNATVMVTAEIDHIQQVERPDGSVVCLCIRCTNPEEATLWEALKIKDRTIEIIKAA
Number of Associated Samples	64
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	47.86 %
% of genes near scaffold ends (potentially truncated)	37.29 %
% of genes from short scaffolds (< 2000 bps)	77.12 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (50.847 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (36.441 % of family members)
Environment Ontology (ENVO)	Unclassified (45.763 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.610 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.41% β-sheet: 27.97% Coil/Unstructured: 57.63%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
b.43.2.0: FucI/AraA C-terminal domain-like	d3a9sa2	3a9s	0.63
b.43.3.0: Translation proteins	d4rd4a2	4rd4	0.63
b.43.4.1: Riboflavin synthase domain-like	d1f20a1	1f20	0.61
b.46.1.2: FMT C-terminal domain-like	d3ubya1	3uby	0.61
b.43.4.0: Riboflavin synthase domain-like	d5gxub1	5gxu	0.61

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00528	BPD_transp_1	24.58
PF00072	Response_reg	13.56
PF02518	HATPase_c	5.93
PF00005	ABC_tran	4.24
PF01259	SAICAR_synt	2.54
PF05227	CHASE3	1.69
PF12911	OppC_N	1.69
PF13489	Methyltransf_23	0.85
PF00578	AhpC-TSA	0.85
PF13579	Glyco_trans_4_4	0.85
PF00535	Glycos_transf_2	0.85
PF00152	tRNA-synt_2	0.85
PF04577	Glyco_transf_61	0.85
PF03352	Adenine_glyco	0.85
PF13533	Biotin_lipoyl_2	0.85
PF08352	oligo_HPY	0.85
PF00667	FAD_binding_1	0.85
PF08447	PAS_3	0.85
PF03009	GDPD	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	2.54
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.85
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.85
COG0369	Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases	Nucleotide transport and metabolism [F]	0.85
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.85
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.85
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.85
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
All Organisms	root	All Organisms	49.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
cellular organisms	root	All Organisms → cellular organisms	49.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.17 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.08 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	4.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2.54 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	1.69 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.85 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.85 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2.54 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	1.69 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.85 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.85 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2.54 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	1.69 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	0.85 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.85 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2.54 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	1.69 %
unclassified Opitutus	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus	0.85 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.85 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.85 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2.54 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	1.69 %
Opitutus sp. GAS368	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. GAS368	0.85 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.85 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003320\|rootH2_10002001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5183	Open in IMG/M
3300004092\|Ga0062389_100200992	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300004092\|Ga0062389_102667895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	665	Open in IMG/M
3300004635\|Ga0062388_100423198	Not Available	1165	Open in IMG/M
3300004635\|Ga0062388_102774777	Not Available	516	Open in IMG/M
3300009500\|Ga0116229_10002453	All Organisms → cellular organisms → Bacteria	30009	Open in IMG/M
3300009500\|Ga0116229_10007157	All Organisms → cellular organisms → Bacteria	17769	Open in IMG/M
3300009500\|Ga0116229_10028749	All Organisms → cellular organisms → Bacteria → Proteobacteria	6368	Open in IMG/M
3300009627\|Ga0116109_1142964	Not Available	544	Open in IMG/M
3300009697\|Ga0116231_10783439	Not Available	518	Open in IMG/M
3300009709\|Ga0116227_10058129	All Organisms → cellular organisms → Bacteria	3430	Open in IMG/M
3300009787\|Ga0116226_10040272	All Organisms → cellular organisms → Bacteria	4679	Open in IMG/M
3300009787\|Ga0116226_12025175	Not Available	521	Open in IMG/M
3300013314\|Ga0175859_1122167	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300014168\|Ga0181534_10102954	Not Available	1432	Open in IMG/M
3300014201\|Ga0181537_10003374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13669	Open in IMG/M
3300014201\|Ga0181537_10049704	All Organisms → cellular organisms → Bacteria	2845	Open in IMG/M
3300014489\|Ga0182018_10523522	Not Available	626	Open in IMG/M
3300014492\|Ga0182013_10562681	Not Available	585	Open in IMG/M
3300014493\|Ga0182016_10644977	Not Available	599	Open in IMG/M
3300014495\|Ga0182015_10128968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1732	Open in IMG/M
3300014495\|Ga0182015_10369091	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300014495\|Ga0182015_10899269	Not Available	555	Open in IMG/M
3300014496\|Ga0182011_10179036	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300014499\|Ga0182012_10418436	Not Available	881	Open in IMG/M
3300014499\|Ga0182012_10709627	Not Available	641	Open in IMG/M
3300014501\|Ga0182024_10007418	All Organisms → cellular organisms → Bacteria	23638	Open in IMG/M
3300014654\|Ga0181525_10595400	Not Available	616	Open in IMG/M
3300014838\|Ga0182030_10010096	All Organisms → cellular organisms → Bacteria	19259	Open in IMG/M
3300014838\|Ga0182030_10076230	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4901	Open in IMG/M
3300014838\|Ga0182030_10325327	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1668	Open in IMG/M
3300014838\|Ga0182030_10637940	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300015206\|Ga0167644_1003025	All Organisms → cellular organisms → Bacteria	10337	Open in IMG/M
3300020061\|Ga0193716_1068033	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300027860\|Ga0209611_10021842	All Organisms → cellular organisms → Bacteria	7323	Open in IMG/M
3300028745\|Ga0302267_10002196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	23827	Open in IMG/M
3300028745\|Ga0302267_10017490	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5516	Open in IMG/M
3300028745\|Ga0302267_10085369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. GAS368	1594	Open in IMG/M
3300028745\|Ga0302267_10425629	Not Available	545	Open in IMG/M
3300028779\|Ga0302266_10139344	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300028779\|Ga0302266_10287545	Not Available	604	Open in IMG/M
3300028788\|Ga0302189_10395822	Not Available	542	Open in IMG/M
3300028866\|Ga0302278_10139581	Not Available	1280	Open in IMG/M
3300028909\|Ga0302200_10460968	Not Available	584	Open in IMG/M
3300029910\|Ga0311369_10217122	Not Available	1766	Open in IMG/M
3300029911\|Ga0311361_10472614	Not Available	1267	Open in IMG/M
3300029911\|Ga0311361_10476360	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300029911\|Ga0311361_10517510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	1180	Open in IMG/M
3300029911\|Ga0311361_10773460	Not Available	858	Open in IMG/M
3300029913\|Ga0311362_10445304	Not Available	1237	Open in IMG/M
3300029913\|Ga0311362_11008741	Not Available	649	Open in IMG/M
3300029914\|Ga0311359_10914726	Not Available	601	Open in IMG/M
3300029915\|Ga0311358_10187823	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300029915\|Ga0311358_10719668	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	730	Open in IMG/M
3300029915\|Ga0311358_11002213	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300029922\|Ga0311363_11079489	Not Available	693	Open in IMG/M
3300029922\|Ga0311363_11155044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	658	Open in IMG/M
3300029944\|Ga0311352_11281831	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300029945\|Ga0311330_11034822	Not Available	604	Open in IMG/M
3300029951\|Ga0311371_10112715	All Organisms → cellular organisms → Bacteria	4284	Open in IMG/M
3300029951\|Ga0311371_10170242	All Organisms → cellular organisms → Bacteria	3293	Open in IMG/M
3300029951\|Ga0311371_10488183	Not Available	1631	Open in IMG/M
3300029951\|Ga0311371_11558305	Not Available	731	Open in IMG/M
3300029952\|Ga0311346_10894986	Not Available	732	Open in IMG/M
3300029952\|Ga0311346_10936838	Not Available	708	Open in IMG/M
3300029953\|Ga0311343_11278503	Not Available	554	Open in IMG/M
3300029954\|Ga0311331_11015641	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300029955\|Ga0311342_10716594	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300030011\|Ga0302270_10015338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	6243	Open in IMG/M
3300030020\|Ga0311344_10050965	All Organisms → cellular organisms → Bacteria	5132	Open in IMG/M
3300030051\|Ga0302195_10362294	Not Available	633	Open in IMG/M
3300030503\|Ga0311370_11737498	Not Available	638	Open in IMG/M
3300030503\|Ga0311370_11898281	Not Available	600	Open in IMG/M
3300030503\|Ga0311370_11965143	Not Available	586	Open in IMG/M
3300030503\|Ga0311370_12006173	Not Available	578	Open in IMG/M
3300030518\|Ga0302275_10380236	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300030519\|Ga0302193_10124385	All Organisms → cellular organisms → Bacteria → Proteobacteria	1530	Open in IMG/M
3300030520\|Ga0311372_10196273	All Organisms → cellular organisms → Bacteria	3384	Open in IMG/M
3300030520\|Ga0311372_10580822	All Organisms → cellular organisms → Bacteria → Proteobacteria	1610	Open in IMG/M
3300030520\|Ga0311372_11535260	Not Available	818	Open in IMG/M
3300030520\|Ga0311372_12539749	Not Available	574	Open in IMG/M
3300030617\|Ga0311356_11975959	Not Available	516	Open in IMG/M
3300030618\|Ga0311354_10406662	Not Available	1372	Open in IMG/M
3300030688\|Ga0311345_10785003	Not Available	750	Open in IMG/M
3300030906\|Ga0302314_10745524	All Organisms → cellular organisms → Bacteria → Proteobacteria	991	Open in IMG/M
3300031234\|Ga0302325_10287749	All Organisms → cellular organisms → Bacteria → Proteobacteria	2684	Open in IMG/M
3300031234\|Ga0302325_10950108	Not Available	1184	Open in IMG/M
3300031234\|Ga0302325_12906345	Not Available	557	Open in IMG/M
3300031236\|Ga0302324_100186605	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
3300031236\|Ga0302324_100567974	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300031236\|Ga0302324_101063415	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300031236\|Ga0302324_102374769	Not Available	652	Open in IMG/M
3300031236\|Ga0302324_102443947	Not Available	640	Open in IMG/M
3300031236\|Ga0302324_102697032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300031236\|Ga0302324_103049368	Not Available	556	Open in IMG/M
3300031236\|Ga0302324_103372640	Not Available	521	Open in IMG/M
3300031258\|Ga0302318_10163349	Not Available	1051	Open in IMG/M
3300031258\|Ga0302318_10351092	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300031524\|Ga0302320_10146754	All Organisms → cellular organisms → Bacteria	3573	Open in IMG/M
3300031524\|Ga0302320_10278703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2253	Open in IMG/M
3300031524\|Ga0302320_10529619	Not Available	1411	Open in IMG/M
3300031524\|Ga0302320_10739826	Not Available	1105	Open in IMG/M
3300031524\|Ga0302320_10750991	Not Available	1093	Open in IMG/M
3300031524\|Ga0302320_11758989	Not Available	594	Open in IMG/M
3300031525\|Ga0302326_10830407	Not Available	1326	Open in IMG/M
3300031525\|Ga0302326_11012770	Not Available	1166	Open in IMG/M
3300031525\|Ga0302326_11829507	Not Available	794	Open in IMG/M
3300031525\|Ga0302326_12403740	Not Available	665	Open in IMG/M
3300031708\|Ga0310686_101823764	All Organisms → cellular organisms → Bacteria	5663	Open in IMG/M
3300031708\|Ga0310686_112841323	All Organisms → cellular organisms → Bacteria	4387	Open in IMG/M
3300031788\|Ga0302319_10304005	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	1868	Open in IMG/M
3300031788\|Ga0302319_10524897	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300031788\|Ga0302319_10775848	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300032562\|Ga0316226_1245530	Not Available	717	Open in IMG/M
3300032579\|Ga0316228_1102106	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300032677\|Ga0316227_1197011	Not Available	708	Open in IMG/M
3300033888\|Ga0334792_132807	Not Available	651	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.53%
Host-Associated	Host-Associated	8.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.36%
Aquatic	Environmental → Aquatic	10.17%
Plants	Host-Associated → Plants	8.47%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	66.10%
Soil	Environmental → Terrestrial → Soil	15.25%
Freshwater	Environmental → Aquatic → Freshwater	10.17%
Peat Moss	Host-Associated → Plants → Peat Moss	6.78%
Rhizome	Host-Associated → Plants → Rhizome	0.85%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	66.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.63%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	6.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.39%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.54%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	66.10%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.78%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	6.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.39%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	36.44%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	27.12%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	6.78%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	6.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.39%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.39%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.54%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.85%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.85%
Moss Associated	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Moss Associated	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009627	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10	Environmental	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300013314	Moss microbial communities from three moss species from boreal forest in Fairbanks, Alaska, USA Reanalysis	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032579	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18021	Environmental	Open in IMG/M
3300032677	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
rootH2_100020013	3300003320	Sugarcane Root And Bulk Soil	MSRFHVRDTFAISDRAFFVLAGFAIEGEVAAGMLVRLPFTSRVTVTEEIDHIQRVERPDGEVTCLCIRCHTPDEATLWEALKLQDTTVEVIKPA*
Ga0062389_1002009922	3300004092	Bog Forest Soil	MSRFHVRDTFAISDKAFFVLAGFAIEGEVAAGMLVRLPFTGRVTITEEIDHIQRIERPDGVVTCLCIRCHTPDESTLWEALKLKDTTVEVIKAA*
Ga0062389_1026678951	3300004092	Bog Forest Soil	MEDRKTFVLAGFVIEGNVEKGMAVRLPFKENVMLTADIDHIQVLRRPDGEVICLCIRCDVEEELVLWEALKIKDHFIEVIKAA*
Ga0062388_1004231982	3300004635	Bog Forest Soil	TRRIMSRFHVRDTFAISDKAFFVLAGFAIEGEVAAGMLVRLPFTGRVTITEEIDHIQRIERPDGVVTCLCIRCHTPDESTLWEALKLKDTTVEVIKAA*
Ga0062388_1027747771	3300004635	Bog Forest Soil	MNDKSAFVMAGFVIEGEIAAGMSVRLPFKENVMMTAEIDHIQVIRRPDGDIVCLCIWCGSPEEATLWEALKIKDHTIDIIKAA*
Ga0116229_1000245324	3300009500	Host-Associated	MARFHVRDAFALNDKCAFVMAGFVIEGEVAAGMLIRLPFHANVMMTAEIDHIQYLRRPDGDVVCLCIRCVDPNEVTLWEALKIKDRTIEVIAAG*
Ga0116229_1000715716	3300009500	Host-Associated	MSRFHVRDTFAISDKAFFVLAGFAIEGEVAAGMLVRLPFTARVTITEEIDHIQRLERPDGEVTCLCLRCHTPDESTLWEALKLQETTVEVIKPA*
Ga0116229_100287494	3300009500	Host-Associated	MAGFVIEGEIGDGMQIRLPLLANAMMTAEINHIEHIRRPDGDVVGLVIQCQDPNELTLWEALKIKDRTVEIIKAHLPV*
Ga0116109_11429641	3300009627	Peatland	MSRFHVRDTFAISDKAFFVLAGFAIEGEVAAGMLVRLPFTARVTITEEIDHNQQIERPDGVVTCLCIRCHTPDESTLWEALKLQDTTVEVIKPA*
Ga0116231_107834391	3300009697	Host-Associated	AFFVLAGFAIEGEVAAGMLVRLPFTARVTITEEIDHIQRLERPDGEVTCLCLRCHTPDESTLWEALKLQETTVEVIKPA*
Ga0116227_100581292	3300009709	Host-Associated	MNDKSAFVLAGFVIEGKIAAGMQVRVPFLATVLATAPIDHVQSLHQPDGDVTCLCLRCTDPQEATLWEALKIKDRTVEIIEAV*
Ga0116226_100402723	3300009787	Host-Associated	MSRFHVRDTFAISDRAFFVLAGFAIEGEIKGGMLVRMPFTARVTVTEEIDHIQRVTRPDGEVTCLCIRCHTPQEATLWEALKLNDTTVEVIPPTPSA*
Ga0116226_120251751	3300009787	Host-Associated	MSRFHVRDTFAISDKAFFVLAGFALEGEVEAGMLVRLPFNAQLTITEEIDHIQRVTRPDGEVACLCLRCHSPQEATLWEALALKDTTVEVIKPQPAA*
Ga0175859_11221672	3300013314	Moss Associated	MPRFHVRDAFPLNDKCAFVMAGFVIEGEVNAGMLIRLPFHANVMMTAEIDHIQSISRPDGDVVCLCIKCVDPDEITLWEALKIKDRTIEVIPAN*
Ga0181534_101029542	3300014168	Bog	LEASGGFMARFHVRDTFAINDKSTFVMAGFVIEGEILAGMFIRMPFNATVMMTAEIDHIQLIQRPDGDVVCLCIQCKDPQEATLWEALKIKDHTVEIIKA*
Ga0181537_1000337410	3300014201	Bog	MARFHVRDTFAINDKSTFVMAGFVIEGEILAGMFIRMPFNATVMMTAEIDHIQLIQRPDGDVVCLCIQCKDPQEATLWEALKIKDHTVEIIKA*
Ga0181537_100497041	3300014201	Bog	NDKSAFVMAGFIIEGEPAAGMLVRLPFKENVMMTAEIDHIQYVRRPDGDVVCLCIRCMSPEEATLWDALKIKDHTIDIIKAA*
Ga0182018_105235221	3300014489	Palsa	FAINDKSAFVMAGFVIEGEIAAGMSMRLPFKEDVMMTAKIDHIQFVRRPDGDVVCLCIRCVSPEEATLWEALKIKDRTVEIIKAA*
Ga0182013_105626811	3300014492	Bog	MARFHVRDTFAINDKSVFVLAGFVIEGEIAAGMLVRLPFKENVMMTAEIDHIQDIRRPDGDVVCLCIRCAKPEEVTLWEALKIKDHTIEIIKSDMSS*
Ga0182016_106449772	3300014493	Bog	MARFHVRDTFAINDKSVFVLAGFVIEGEIAAGMLVRLPFKENVMMTAEIDHIQDIRRPDGDVVCLCIRCAKPEEVTL
Ga0182015_101289682	3300014495	Palsa	MPRFHVRDAFAMNDKSAFVMAGFVIEGEIAAGMSVRLPFKENVMMTAEIDHIQVVRRPDGDIVCLCIRCASPEEATLWEALKIKDHTMDIIQAPPS*
Ga0182015_103690912	3300014495	Palsa	MSDKSVFVMAGFIIEGEIAAGMSMRLPFKENVMMTAKIDHIQFVRRPDGDVVCLCIRCASPEEATLWEALKIKDHTVDLIQAQP*
Ga0182015_108992692	3300014495	Palsa	MPRFHVRDTFATNDKRLFVMAGFVIEGEILAGMFVRFPFKEEVMMTAEIDHIQSIRRPDGDVVCLCIRCARPEEVTLWE
Ga0182011_101790361	3300014496	Fen	MPRFHVRDTFAINDKSVFVMAGFVIEGEIVAGMSVRFPFKENVMMTAAIDHIQFVRRPDGDVVCLCIRCANPEEITLWEAFKIK
Ga0182012_104184361	3300014499	Bog	DAFPMNDKSVFVMAGFVIEGEIEAGMLVRLPFHASVMMTAEIDHIQPLQRPDGDVVCLCIRCQDPDEATLWEALKIKDRTIEIITAEALK*
Ga0182012_107096272	3300014499	Bog	MPRFHVRDAFAIHDKNTFVMAGFVIEGEPAPGMLVRLPFKEKVMVTAEIDHIQQIQRPDGNIVCLCIRCADPREATLWEAMKIKDQTVDIIKAA*
Ga0182024_1000741813	3300014501	Permafrost	MPRFHVRDAFAINDKSAFVMAGFVIEGEPAAGMLVRLPFKENVMMTAEIDHIQYVRRPDGDVVCLCVRCESPEEAALWDALKIKDHTIDIIKAA*
Ga0181525_105954001	3300014654	Bog	MSRFHVRDTFAISDRAFFVLAGFAIEGEVDAGMLVRLPFNAQVTITEEIDHIQRIERPDGQVLCLCLRCHSPEEATLWEALKLKDSTVEVINPATAA*
Ga0182030_100100969	3300014838	Bog	MLEAPARAMPRFHVRDSFAINDKSTFVMAGFVIEGEIADGMSVRLPFKENVMMTAEIDRIQFVRRPDGDVVCLCIRCASPDEATLWEALKIKDRTIEIITAGAP*
Ga0182030_100762304	3300014838	Bog	MPRFHVRDTFAINDKSFFVLAGFAIEGEIGAGMLVRMPFNATIMMTAEVDHIQHVERPDGNVVCLCIRCTNPEEVTLWEALKIKDQTIEVIKPDMS*
Ga0182030_103253272	3300014838	Bog	MARFHVRDAFPLNDKCAFVMAGFVIEGEVAAGMLIRLPFHANVMMTAEIDHIQYLRRPDGDVVCLCIRCVDPNEVTLWEALKIKDRTIEVIQAA*
Ga0182030_106379402	3300014838	Bog	MSRFHVRDTFAISDKAFFVLAGFAIEGEVEAGMLVRLPFNAQVTVTEEIDHIQRVTRPDGEVVCLCLRCHTPQEATLWEALKLEDTTVEIIKPTPAA*
Ga0167644_10030255	3300015206	Glacier Forefield Soil	MPRFHVRDTFAINDKKFFVLAGFAIEGEIIAGMFLRMPFNATVMMTAEIDHIQHVQQADGDVVCLCIRCENPEEATLWGALKIKDQTIDVSAPV*
Ga0193716_10680331	3300020061	Soil	MAGFIIEGQIAAGMLVRMPFNATVMVTAEIDHIQNLQRPDGDVVCLCIRCADPRELTLWE
Ga0209611_100218423	3300027860	Host-Associated	MAGFVIEGEVAAGMLIRLPFHANVMMTAEIDHIQYLRRPDGDVVCLCIRCVDPNEVTLWEALKIKDRTIEVIAAG
Ga0302267_1000219611	3300028745	Bog	MSRFHVRDTFAISDKAFFVLAGFAIEGEVAAGMLVRLPFTARVTITEEIDHIQLIERPDGQVTCLCIRCHTPDESTLWEALKLQDTTVEVIKPA
Ga0302267_100174902	3300028745	Bog	MPQFHVRDTFAIQDNTVFVLAGFAVEGEIVAGMLVRIPFREATMLTAEIDHIERVQRPDGDVVCLCIRCAQPKDIVLWDALKLRDRIIEVIKRG
Ga0302267_100853691	3300028745	Bog	MAGFIIEGEIAPGMSVRLPFKENVMMTAQIDQIQFVRRQDGDVVCLCIRCARPEEAALWEALKIKDRTIEIIKAA
Ga0302267_104256292	3300028745	Bog	RDAFPMNDKSIFVMAGFVIEGDIAAGMLVRLPFRDAVMMTAEIDHIQHLRRPDGDVACLCIRCLDPKEVTLWEALKIKDKTVEIIKAEALL
Ga0302266_101393442	3300028779	Bog	MPRFHVRDTFAINDKSFFVLAGFSIEGEISAGMLVRMPFNATVMMTAEIDHIQHIERSDGNVICLCIRCTNPQEVVLWEALKIKDRTIEVIQADLS
Ga0302266_102875452	3300028779	Bog	PRFHVRDAFAIHDKSVFVLAGFVIEGEIAAGMSVQTPFNPTVMVTAKIDQVQHLHQPDGDIVCLCIRCANPQETALWEALKIKDRTIDLIQAP
Ga0302189_103958221	3300028788	Bog	GFVIEGEIAAGMSVQTPFNPTVMVTAKIDQVQHLHQPDGDIVCLCIRCANPQETALWEALKIKDRTIDLIQAP
Ga0302278_101395812	3300028866	Bog	FHVRDTFAIHDKSVFVMAGFIIEGEIAPGMSVRLPFKENVMMTAQIDQIQFVRRQDGDVVCLCIRCARPEEAALWEALKIKDRTIEIIKAA
Ga0302200_104609681	3300028909	Bog	DTFAINDKSFFVLAGFSIEGEISAGMLVRMPFNATVMMTAEIDHIQHIERSDGNVICLCIRCTNPQEVVLWEALKIKDRTIEVIQADLS
Ga0311327_101984103	3300029883	Bog	VVSYVGTRRIMSRFHVRDTFAISDKAFFVLAGFAIEGEVAAGMLVRLPFTARVTITEEIDHIQLIERPDGQVTCLCIRCHTPDESTLWEALKLQDTTVEVIKPA
Ga0311369_102171221	3300029910	Palsa	MPRFHVRDTFAISDKSLFVLAGFIIEGEVTAGMSVRLPFNASLMMSEVIDHIQNIERPDGNVVCLCLRCRSAEEASLWDALKIKDRTIDITKAA
Ga0311361_104726142	3300029911	Bog	MPRFHVRDAFSMSDKSLFVMAGFVFEGEITGGMLVRFPFHDKVMMTAEIDHVQYLRRPDGDVTCLCIRCQDPNEVTLWEALKIKDRTIDIIPAGSLV
Ga0311361_104763602	3300029911	Bog	MSRFHVRDAFPMNDKSIFVMAGFVIEGDIAAGMLVRLPFRDAVMMTAEIDHIQHLRRPDGDVACLCIRCLDTKEVTLWEALKIKDKTVEIIKAEALL
Ga0311361_105175101	3300029911	Bog	MSPTFGQARNPMPRFHVRDTFAINDKSFFVLAGFSIEGEISAGMLVRMPFNATVMMTAEIDHIQHIERSDGNVICLCIRCTNPQEVVLWEALKIKDRTIEVIQADLS
Ga0311361_107734602	3300029911	Bog	MNDKCLFVMAGFVIEGELESGMQVRLPFHANVMMTADIDHIQYLRRPDGDVVCLCLKCQDPKELTLWEALKLKDRTIDIIKAGSLV
Ga0311362_104453041	3300029913	Bog	TFAIHDKSVFVLAGFVIEGEIAAGMSVQTPFNPTVMVTAKIDQVQHLHQPDGDIVCLCIRCANPQETALWEALKIKDRTIDLIQAP
Ga0311362_110087411	3300029913	Bog	MNDKCLFVMAGFVIEGELESGMQMRLPFHANVMMTADIDHIQYLRRPDGDVVCLCLKCQDPKELTLWEALKLKDRTIDIIKAGSLV
Ga0311359_109147261	3300029914	Bog	MNDKSVFVMAGFVIEGEIEAGMLVRLPFHASVMMTAEIDHIQHLQRPDGDIVCLCIRCAKPEEVTLWEALKIK
Ga0311358_101878233	3300029915	Bog	VLEARQVVFYGGDARFMSRFHVRDAFPMNDKSIFVMAGFVIEGDIAAGMLVRLPFRDAVMMTAEIDHIQHLRRPDGDVACLCIRCLDPKEVTLWEALKIKDKTVEIIKAEALL
Ga0311358_107196682	3300029915	Bog	PRFHVRDAFAIHDKSVFVLAGFVIEGEVAADMLVSFPFKENVMMTAKIDDIQRVHRPDGDVVCLCIQYARPEEATLWEALKIKDRTIDLIKAP
Ga0311358_110022132	3300029915	Bog	MARFHVRDTFAISDKAFFVLAGFAIEGEIEAGMLVRLPFTARVTITEEIDHLQRVERPDGQVTCLCIRCHTPDEATLWEALKLKDTTIEVIKPTLAA
Ga0311363_110794892	3300029922	Fen	MNGKSIFVMAGFVIEGDIAAGMLVRLPFRDAVMMTAEIDHIQHLRRPDGDVACLCIRCLDTKEVTLWEALKIKDKTVEIIKAEALL
Ga0311363_111550441	3300029922	Fen	MPRFHVRDAFPMSDKCVFVMAGFVIEGEIEGGMLVRLPFHAKVMMTAEIDHIQYLRRPDGDVVCLCIRCQDPGEVTLWEALKIKDRTID
Ga0311352_112818312	3300029944	Palsa	MARFHVRDTFAINDKKAFVLAGFTIEGEIAASMLVRMPFNATVSMTAEIDHIEIVRRPDGDVVCICIRCAAPEEVKLWEALKLKDHTVEVIKAG
Ga0311330_110348221	3300029945	Bog	RDTFAIQDNTVFVLAGFAVEGEIVAGMLVRIPFREATMLTAEIDHIERVQRPDGDVVCLCIRCAQPKDIVLWDALKLRDRIIEVIKRG
Ga0311371_101127151	3300029951	Palsa	MTDKCAFVMAGFSIEGAIGDGMLVRLPVTHKVMMTAKIDHIQTLHRPDGDVTCLVMKCQDPKELALWDALKIKDRTVDII
Ga0311371_101702421	3300029951	Palsa	MPRFHVRDTFAISDKSLFVLAGFIIEGEVTAGMSVRLPFNASLMMSEVIDHIQNIERPDGNVVCLCLRCRSAEEESLWDALKIKDRTIDIIKAA
Ga0311371_104881833	3300029951	Palsa	MPRFHVRDAFAIDDKSIFVMAGFIIEGEIAAGMLVRMPFNPTVMVTAEIDHLQHLRRPDGDVVCLCIRCSDPEEATLWQALKIKDRTVDIIPAA
Ga0311371_115583051	3300029951	Palsa	VMAGFIIEGDIAAGMLVRMPFNASVMMTAEIDHIQFVRRPDGDVVCLCVRCARPEEATLWEALKIKDRTIDIITAA
Ga0311346_108949861	3300029952	Bog	AGMLVRMPFNANVMMTAEIDHIQRVERPDGDVVCLCIRYTDPEELTLWDALKLKDRTVEIIKSDKG
Ga0311346_109368381	3300029952	Bog	HVRDTFAINDKSFFVLAGFSIEGEISAGMLVRMPFNATVMMTAEIDHIQHIERSDGNVICLCIRCTNPQEVVLWEALKIKDRTIEVIQADLS
Ga0311343_112785031	3300029953	Bog	MNGKSIFVMAGFVIEGDIAAGMLVRLPFRDAVMMTAEIDHIQNLRRPDGDVVCLCIRCLDPKEVTLWEALKIKDKTVEIIKAEALL
Ga0311331_110156412	3300029954	Bog	AFFVLAGFAIEGEVAPGMLVRLPFNAQITVTEEIDHIQRVTRPDGEVVCLCLRCHSPQEAALWEALKLQDTTLEIIQPAVQGA
Ga0311342_107165942	3300029955	Bog	MNDKSIFVMAGFVIEGDIAAGMLVRLPFRDAVMMTAEIDHIQNLRRPDGDVVCLCIRCLDPKEVTLWEALKIKDKTVEIIKAEALL
Ga0302270_100153388	3300030011	Bog	GMSVRLPFKENVMMTAQIDQIQFVRRQDGDVVCLCIRCARPEEAALWEALKIKDRTIEIIKAA
Ga0311344_100509656	3300030020	Bog	GGTRRIMSRFHVRDTFAISDKAFFVLAGFAIEGEVAAGMLVRLPFTARVTITEEIDHIQLIERPDGQVTCLCIRCHTPDESTLWEALKLQDTTVEVIKPA
Ga0302195_103622941	3300030051	Bog	AGFVIEGEIAAGMSVQTPFNPTVMVTAKIDQVQHLHQPDGDIVCLCIRCANPQETALWEALKIKDRTIDLIQAP
Ga0311370_117374981	3300030503	Palsa	MNDKCAFVMAGFVIEGQIADGMHIRLPFHHKVMMTAKIDHIQTLHRPDGDVTCLCIACREPKELALWDALKIKDQTVDIITAESIP
Ga0311370_118982811	3300030503	Palsa	HVRDTFAINDKAFFVMAGFSIEGEIVAGMLVRMPFNATVMVTAEIDHIQQVERPDGSVVCLCIRCTNPEEATLWEALKIKDRTIEIIKAA
Ga0311370_119651431	3300030503	Palsa	AFFVLAGFAIEGEIQPGMLVRLPFNAQVTVTEEIDHIQRVERPDGEVVCLCLRCHTPEEATLWEALKLEDTTVEIIKPVPGA
Ga0311370_120061731	3300030503	Palsa	WERSACPMPRFHVRDAFPMNDKYAFVMAGFVIEGEIAGGMLVRLPFHGDVMMTAEIDHIQYLRRPDGDVVCLCIKCQDPNEVTLWEALKLKDRTIDIITADSIP
Ga0302275_103802362	3300030518	Bog	MNDKSIFVMAGFVIEGDIAAGMLVRLPFRDAVMMTAEIDHIQHLRRPDGDVACLCIRCLDTKEVTLWEALKIKDKTVEIIKAEALL
Ga0302193_101243852	3300030519	Bog	MARFHVRDTFAINDKSIFVMAGFVIEGEVEAKMYIRMPFNATVMMTAEIDHIQLIERPDGNVMCLCIRCKDPQEATLWEALKIKDHTVEIIKA
Ga0311372_101962734	3300030520	Palsa	MAGFSIEGAIADGMLVRLPVTHKVMMTAKIDHIQTLHRPDGDVTCLVVKCQDPKELALWDALKIKDRTVDIIPADSPA
Ga0311372_105808222	3300030520	Palsa	MNDKSAFVMAGFVIEGEVLAGMLVRMPFHGDVMMTAEIDHLQYLRRPDGDVVCLCIRCTDPEEVTLWEALKIKDRTVDIIKADAI
Ga0311372_115352602	3300030520	Palsa	MKDKCAFVMAGFVIEGEITDHMLVRLPVLANAMMTAEIDHIEHIRRPDGDVVCLVIKCQEPKEMTLLEALQIKDRTVDIIKAESLV
Ga0311372_125397492	3300030520	Palsa	KTAFIMAGFVIEGDIAAGMLVRVPFHATTMMTAEIDHIQYLRRPDGDVVCLCIKCADPQETMLWDALKLKDHVIEIIAAT
Ga0311356_119759591	3300030617	Palsa	MARFHVRDAFAINDRTVYVLAGFVIEGEVAARMLLRIPFHATTMMTAEIDHIQYLRRPDGDVMCLCVRCENPEEVTLWTALNLAERSIEIIKPT
Ga0311354_104066623	3300030618	Palsa	MAGFVIEGEIAAGMSVRLPFKENVMITAEIDHIQHIERPNGDVVCLCIRCAKPEEAALWEALRMKDHTIEIITVK
Ga0311345_107850032	3300030688	Bog	TFAINDKSFFVLAGFSIEGEISAGMLVRMPFNATVMMTAEIDHIQHIERSDGNVICLCIRCTNPQEVVLWEALKIKDRTIEVIQADLS
Ga0302314_107455242	3300030906	Palsa	MSRFHVRDTFAISDKAFFVLAGFAIEGEVAAGMLVRLPFTARVTITEEIDHIQQIERPDGVVTCLCIRCHTPDESTLWEALKLQDTTVEVIKPA
Ga0302325_102877492	3300031234	Palsa	MARFHVRDTFTVEDKSTFVMAGFVIEGEITEGMSVRMPFKENVMITSEIDHTQVIRRPDGDVVCLCIRCGTPKEAALWKALKIKDQTIEIISTPS
Ga0302325_109501083	3300031234	Palsa	MPRFHVRDTFAINDKSTFVMAGFVIEGEIAAGMSVRLPFKENVMITAEIDHIQHIERPDGDVVCLCIRCAKPEEAALWEALRMKDHTIEIITVK
Ga0302325_129063452	3300031234	Palsa	EGGDARFHLNCRLSRPQSCWKRRRLSPTLELAVRFMPRFHVRDAFAINDKSAFVMAGFVIEGEPAAGMLVRLPFSATVMTTAEIDHIQYVRRPDGDVVCLCIKCASPEEATLWEALKIKDRTIEIIKAA
Ga0302324_1001866052	3300031236	Palsa	MNDKCVFVMAGFVIEGEIAAGMLVRLPFHAAVMMTAEIDHIQYLRRPDGDVVCLCIRCAEPQEVTLWEALKIKDRTVDIIEAK
Ga0302324_1005679742	3300031236	Palsa	MPRFHVRDAFAIHDKSLFVMAGFVIEGDIAAGMLIRLPFHDKAMMTAEIDHIQYIRRPDGDVVCLCIRCAEPEEVILWEALKIKDRNIEIITASAPS
Ga0302324_1010634152	3300031236	Palsa	MAGFVIEGEPAAGMLVRLPFSASIMMTAEIDHIQYVRRPDGDVVCLCIKCASPEEVTLWDALKIKDRTIEIIKAA
Ga0302324_1023747692	3300031236	Palsa	MAGFVIEGEIAGGMLVRLPFKDNVMITAEIDHIQAIRRPDGDIVCLCIRCARPEEATLWEALKMKDHTIEIIPAA
Ga0302324_1024439472	3300031236	Palsa	MAGFVIEGEIAAGMLLRFPFNATVMMTAEIDHIQYVRRQDGDVVCLCIKCANPEEVTLWEALKIKDRTVDIIPGGPGK
Ga0302324_1026970322	3300031236	Palsa	AGFIIEGEIVAGMLVRMPFNATVMMTAEIDRIEFVRRPDGDVVCLCVQCARPDEITLWEALKIKDRTVEIIKADTP
Ga0302324_1030493682	3300031236	Palsa	MPQFHVRDTFAIHDKTVFVLAGFIIEGEISAGMHLRLPFKDQVMMTAQIDHIEFIHRPDGDVVCLGIRCTKREEATLWEALKIKDRTVEIIATA
Ga0302324_1033726401	3300031236	Palsa	FVLAGFTIEGEIAASMLVRMPFNATVSMTAEIDHIEIVRRPDGDVVCICIRCAAPEEVKLWEALKLKDHTVEVIKAG
Ga0302318_101633491	3300031258	Bog	SYGGTRRIMSRFHVRDTFAISDKAFFVLAGFAIEGEVAAGMLVRLPFTARVTITEEIDHIQLIERPDGQVTCLCIRCHTPDESTLWEALKLQDTTVEVIKPA
Ga0302318_103510922	3300031258	Bog	RPLRSMPRFHVRDTFAINDKSLFVLAGFSIEGEIVAGMLVRMPFNANVMMTAEIDHIQRVERPDGDVVCLCIRYTDPEELTLWDALKLKDRTVEIIKSDKG
Ga0302320_101467543	3300031524	Bog	MNDKSVFVMAGFVIEGEIEAGMLVRLPFHASVMMTAEIDHIQPLQRPDGDVVCLCIRCQDPDEATLWEALKIKDRTIEIITAEALK
Ga0302320_102787031	3300031524	Bog	MARFHVRDTFAINDKSVFVLAGFVIEGEIAAGMLVRLPFKENVMMTAEIDHIQHLQRPDGDIVCLCIRCAKPEEVTLWEALKIKDHTIEIIKADLAS
Ga0302320_105296191	3300031524	Bog	MPRFHVRDTFAINDKSLFVLAGFSIEGEIVAGMLVRMPFNANVMMTAEIDHIQRVERPDGDVVCLCIRYTDPEELTLWDALKLKDRTVEIIKSDKG
Ga0302320_107398261	3300031524	Bog	RFHVRDTFAINDKSFFVLAGFSIEGEISAGMLVRMPFNATVMMTAEIDHIQHIERSDGNVICLCIRCTNPQEVVLWEALKIKDRTIEVIQADLS
Ga0302320_107509911	3300031524	Bog	MSRFHVRDAFAIHDKNVFVMAGFVIEGDIAADMLVRFPFKENVMMTAEIDQIQYLRRPDGDVVCLCIRCAKPEEVALWEALKIKDQTI
Ga0302320_117589891	3300031524	Bog	MDGKLSSTLDSPACSMPRFHVRDSFAIHDKSTFVLAGFVIEGEIADGMSVRLPFKENVMMTAKIDRIEFVRRPDGDVVCLCIRCASPQEATLWEALKIKDRTVEIITAA
Ga0302326_108304072	3300031525	Palsa	MPRFHVRDGFAINDKSAFVMAGFVIEGEVSPGMSVRMPFSATVMMSAEIDHIQYVRRPDGDVVCLCIRCANPEEVVLWEALKMKDRTVDIIKADGIG
Ga0302326_110127702	3300031525	Palsa	IVFYVVTRRIMSRFHVRDTFAISDRGFFVLAGFAIEGEIEAGMLVRLPFTARVTITEEIDHIQRIERPDGDVLCLCIRCHTPDEATLWETLKLKDTTIEVIKAA
Ga0302326_118295072	3300031525	Palsa	MAGFVIEGEVAAGMLVRMPFNATVMMTAEIDHIQFVRRPDGDVVCLCIRCASPQEATLWEALKIKDRTIEIITAA
Ga0302326_124037402	3300031525	Palsa	MARFHVRDTFTVEDKSTFVMAGFVIEGEITEGMSVRMPFKENVMITSEIDHTQVIRRPDGDVVCLCVRCARPEEATLWEALKIKDRTIDIITAA
Ga0310686_1018237643	3300031708	Soil	MLGVAARSMPRFHVRESFAINDKSAFVLAGFIMEGEIAAGMSMRLPFKENVMMTAKIDHLEFVRRPDGDVVCLCIRCASPGEATLWEALKIKDRTVEIITADTPQGMPS
Ga0310686_1128413235	3300031708	Soil	MAGFVIESEITAGMLVRLPFKESVMMTAEIDHIQYVRRPDGDVVCLCVRCASPEEATLWEALKIKDHTIEIIQAS
Ga0302319_103040053	3300031788	Bog	AFPMNDKSVFVMAGFVIEGEIEAGMLVRLPFHASVMMTAEIDHIQPLQRPDGDVVCLCIRCQDPDEATLWEALKIKDRTIEIITAEALK
Ga0302319_105248972	3300031788	Bog	MNGKSIFVMAGFVIEGDIAAGMLVRLPFRDAVMMTAEIDHIQHLRGPDGDVACLCIRCLDTKEVTLWEALKIKDKTVEIIKAEALL
Ga0302319_107758482	3300031788	Bog	MPRFHVRDTFATNDKSAFVLAGFVIEGDIAGGMSVRLPFKENVMMTAEIDHIQHVRRPDGDVICLCIRCANPEEVALWNALKIKGRTIEIITTAS
Ga0316226_12455302	3300032562	Freshwater	MAGFVIEGEIAAGMLVRMPFNATVMMTAEIDRIQYVRRPDGDVVCLCIRCASPEEATLWEALKIKDRTIEIIKAA
Ga0316228_11021062	3300032579	Freshwater	STFVMAGFVIEGEIAAGMLVRMPFNATVMMTAEIDRIQYVRRPDGDVVCLCIRCASPEEATLWEALKIKDRTIEIIKAA
Ga0316227_11970111	3300032677	Freshwater	FVIEGEIAAGMLVRMPFNATVMMTAEIDRIQYVRRPDGDVVCLCIRCASPEEATLWEALKIKDRTIEIIKAA
Ga0334792_132807_253_534	3300033888	Soil	MSRFHVRDAFAIHNKSVFVMAGFVIEGDIAADMLVRLPFKENVMMTAAIDQIQYVRRPDGDVVCLCIRCASPQEMTLWEALKIKDRTIDLIKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075585

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences