Metagenome Family F075782

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075782
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	86 residues
Representative Sequence	GFTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKHSSDPHRAGAGGNLPPRGGENLADTANPSPSSGDSLTN
Number of Associated Samples	101
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.85 %
% of genes near scaffold ends (potentially truncated)	99.15 %
% of genes from short scaffolds (< 2000 bps)	94.92 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.610 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.254 % of family members)
Environment Ontology (ENVO)	Unclassified (38.136 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.153 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.26% β-sheet: 0.00% Coil/Unstructured: 81.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF12697	Abhydrolase_6	3.39
PF01182	Glucosamine_iso	2.54
PF13466	STAS_2	1.69
PF07642	BBP2	1.69
PF07819	PGAP1	1.69
PF00873	ACR_tran	0.85
PF07311	Dodecin	0.85
PF00126	HTH_1	0.85
PF00529	CusB_dom_1	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	2.54
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.69
COG1075	Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold	Lipid transport and metabolism [I]	1.69
COG2267	Lysophospholipase, alpha-beta hydrolase superfamily	Lipid transport and metabolism [I]	1.69
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	82.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.39 %
Unclassified	root	N/A	3.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	82.20 %
Unclassified	root	N/A	3.39 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	80.51 %
Unclassified	root	N/A	3.39 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.85 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.51 %
Unclassified	root	N/A	3.39 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.51 %
Unclassified	root	N/A	3.39 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.85 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.51 %
Unclassified	root	N/A	3.39 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.85 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.51 %
Unclassified	root	N/A	3.39 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.85 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.51 %
Unclassified	root	N/A	3.39 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.85 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02J2Q0B	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
2170459007\|GKWS7RC02HU4WC	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
2170459010\|GIO7OMY01D9JNQ	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
2189573001\|GZR05M101CXREX	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
2189573004\|GZGWRS402FR92X	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
2209111022\|2221190326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2043	Open in IMG/M
3300000559\|F14TC_100263147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300000881\|JGI10215J12807_1252785	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300000891\|JGI10214J12806_10335102	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300002128\|JGI24036J26619_10091604	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300004156\|Ga0062589_100267655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1295	Open in IMG/M
3300004157\|Ga0062590_102480005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300004480\|Ga0062592_101012957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	760	Open in IMG/M
3300004480\|Ga0062592_101605787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	629	Open in IMG/M
3300005289\|Ga0065704_10021664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1460	Open in IMG/M
3300005293\|Ga0065715_10782283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300005294\|Ga0065705_10822853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300005329\|Ga0070683_102292967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300005331\|Ga0070670_101310984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300005340\|Ga0070689_101369714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300005343\|Ga0070687_100022932	All Organisms → cellular organisms → Bacteria → Proteobacteria	2959	Open in IMG/M
3300005347\|Ga0070668_101836860	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005347\|Ga0070668_102200430	Not Available	509	Open in IMG/M
3300005354\|Ga0070675_102164186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300005366\|Ga0070659_100762913	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	839	Open in IMG/M
3300005367\|Ga0070667_102023202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300005434\|Ga0070709_10122523	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300005435\|Ga0070714_101067663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300005435\|Ga0070714_102238134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300005439\|Ga0070711_101576260	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300005444\|Ga0070694_101795530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300005445\|Ga0070708_102107895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300005450\|Ga0066682_10811926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	564	Open in IMG/M
3300005539\|Ga0068853_101022517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300005546\|Ga0070696_101021437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300005563\|Ga0068855_102275870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300005564\|Ga0070664_102248101	Not Available	517	Open in IMG/M
3300005764\|Ga0066903_101373006	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300006046\|Ga0066652_100795664	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300006871\|Ga0075434_100565388	All Organisms → cellular organisms → Bacteria → Proteobacteria	1157	Open in IMG/M
3300006904\|Ga0075424_101554464	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300009092\|Ga0105250_10545915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300009100\|Ga0075418_11431419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300009101\|Ga0105247_10670094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300009101\|Ga0105247_11725394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300009147\|Ga0114129_10211318	All Organisms → cellular organisms → Bacteria → Proteobacteria	2623	Open in IMG/M
3300009176\|Ga0105242_11125765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	800	Open in IMG/M
3300009545\|Ga0105237_11893664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300009553\|Ga0105249_11470283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	754	Open in IMG/M
3300010046\|Ga0126384_10525644	Not Available	1024	Open in IMG/M
3300010322\|Ga0134084_10106308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	902	Open in IMG/M
3300010358\|Ga0126370_10651244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	918	Open in IMG/M
3300010373\|Ga0134128_13023540	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300010376\|Ga0126381_102029711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	829	Open in IMG/M
3300010376\|Ga0126381_103554226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300010397\|Ga0134124_12591321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300010398\|Ga0126383_10219781	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1840	Open in IMG/M
3300010398\|Ga0126383_12513026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300012200\|Ga0137382_11127978	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300012203\|Ga0137399_10931263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300012203\|Ga0137399_11080309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300012924\|Ga0137413_11287718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300012957\|Ga0164303_10507881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	773	Open in IMG/M
3300012957\|Ga0164303_10610548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300012986\|Ga0164304_10966084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300012987\|Ga0164307_11434822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300013306\|Ga0163162_12698844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	572	Open in IMG/M
3300014166\|Ga0134079_10562888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300014325\|Ga0163163_12201666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300014968\|Ga0157379_12369850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300015374\|Ga0132255_100116568	All Organisms → cellular organisms → Bacteria	3661	Open in IMG/M
3300015374\|Ga0132255_104536304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300016371\|Ga0182034_10293879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1299	Open in IMG/M
3300018028\|Ga0184608_10398682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300018051\|Ga0184620_10150929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300018061\|Ga0184619_10428711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300019362\|Ga0173479_10129175	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300019362\|Ga0173479_10428337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300019877\|Ga0193722_1113621	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300019883\|Ga0193725_1097094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	701	Open in IMG/M
3300019883\|Ga0193725_1129003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300019886\|Ga0193727_1150505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300019886\|Ga0193727_1185886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300019996\|Ga0193693_1048630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300020004\|Ga0193755_1115530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300020004\|Ga0193755_1131069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	775	Open in IMG/M
3300020016\|Ga0193696_1102505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	734	Open in IMG/M
3300020059\|Ga0193745_1098485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300021086\|Ga0179596_10556881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300021413\|Ga0193750_1058118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300021560\|Ga0126371_12209076	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300022694\|Ga0222623_10169380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300022756\|Ga0222622_10673765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300025315\|Ga0207697_10290108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300025905\|Ga0207685_10699075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300025905\|Ga0207685_10780949	Not Available	525	Open in IMG/M
3300025915\|Ga0207693_10263949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1350	Open in IMG/M
3300025915\|Ga0207693_10543945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	906	Open in IMG/M
3300025918\|Ga0207662_10012987	All Organisms → cellular organisms → Bacteria	4651	Open in IMG/M
3300025927\|Ga0207687_11289319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300025932\|Ga0207690_10698385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	834	Open in IMG/M
3300025936\|Ga0207670_10590662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	911	Open in IMG/M
3300025961\|Ga0207712_11021800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	734	Open in IMG/M
3300025972\|Ga0207668_11947046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300026041\|Ga0207639_11218302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	706	Open in IMG/M
3300026116\|Ga0207674_10576483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1087	Open in IMG/M
3300026118\|Ga0207675_101968138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300026523\|Ga0209808_1043971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2077	Open in IMG/M
3300027453\|Ga0207624_112934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300027903\|Ga0209488_10589965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	807	Open in IMG/M
3300028828\|Ga0307312_10334021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	990	Open in IMG/M
3300031057\|Ga0170834_109327755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1207	Open in IMG/M
3300031231\|Ga0170824_117390816	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300031446\|Ga0170820_12123711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300031446\|Ga0170820_14671765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1234	Open in IMG/M
3300031474\|Ga0170818_113520929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300031474\|Ga0170818_113894726	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300031890\|Ga0306925_10829310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	957	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.19%
Host-Associated	Host-Associated	28.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.95%
Plants	Host-Associated → Plants	28.81%
Aquatic	Environmental → Aquatic	4.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.32%
Sediment	Environmental → Aquatic → Sediment	4.24%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.69%
Loam	Environmental → Terrestrial → Soil → Loam	15.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.39%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.39%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.24%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.39%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.54%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	2.54%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027453	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-D (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_00978460	2170459005	Grass Soil	AFTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNASEHSSDPHRAEAEGNLPPRGGENIADTTKASPSSGDSLTI
L02_02646110	2170459007	Grass Soil	GFTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVHLEQNDNASEHSSDPHRAEAEGNLPPRGGENLADTTKASPSSGDSLTI
F62_06530880	2170459010	Grass Soil	FVQSDVAVAVNSALRAAGIEIAFPQRIVRLEQNDNPSKHSSDPHRAGAGGNLPRRGGENLADTTKASPSSGDRSKTER
FD2_01863140	2189573001	Grass Soil	VAVAVNAALRATGIEIAFPQRIVRLEQNDNASKRSSDQHRAGAGGNLPARGSENLTDIAKASPSSGDRSKTER
FG2_09426080	2189573004	Grass Soil	LRLGFTTAEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVHLEQNDNPSKHSSDPHRAGVGRNLPRGGQKLADTTEASPSSGDSLTN
2222004790	2209111022	Grass Soil	QFGEDALVFVLGFTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAYPQRIVRLEQNDNASKHSSDPDRADAGGNLPPQAGGNLAETANASPSSGDSLTN
F14TC_1002631472	3300000559	Soil	VARFPFVQSDVAVAVNGALRQAGIEIAVPQRIVHLEQNDATKHSLGQHRADAGGNLPTGAKENLPDTANSSPNPGDRSQTDSS*
JGI10215J12807_12527852	3300000881	Soil	FVLGFTTEEVGRFPFVQSDVAVAVNAALRDARIEIAFPQRIVHLAQNDNASKHSLGEQRADAGGNLAPRGSENLADTANASPSPGKRSQSSST*
JGI10214J12806_103351021	3300000891	Soil	TTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPGKHLSDPHRAHAGGNVPPRGGENLADPAKPSPSSGDRSQSDLS*
JGI24036J26619_100916042	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	QSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKXSLGQHRGDAGXDLPSRGDENLADAANQSPSSGDRSQTDA*
Ga0062589_1002676551	3300004156	Soil	TTEDVARFPFVQSDVAVAVNAALREAGIEVPVPQRIVHLEQNDTAKHSLGQHRADAGGDLPAGGTESVPDKADSSPNSGDPTQTDS*
Ga0062590_1024800052	3300004157	Soil	AVNAALRAAGIEIAFPQRIVRLEQNDNPGKHLSDPHRAHAGGNVPPRGGENLADPAKPSPSSGDRSQSDLS*
Ga0062592_1010129571	3300004480	Soil	SPFVQSDVAVAVNAALREAGIEIPFPQRIVRLEQNDNASEHSSDPHRAGAGGNLPPRGGEKLADTTKASPSSGDSLTN*
Ga0062592_1016057872	3300004480	Soil	FVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATRHSLGQHRADAGGDLPPGGSESLPDTGNSSPNPGDRSKTDSS*
Ga0065704_100216643	3300005289	Switchgrass Rhizosphere	PFVQSDVAVAVNAALREAGIEIAFPQRIVHLEQNDNASKHSLGQHRADTGGNLPPRNSENLAASVNSGPSSGQHSQTDSS*
Ga0065715_107822832	3300005293	Miscanthus Rhizosphere	EEVSRFTFVQSDVAVAVNAALREAGIEIPYPHRIVRLEQNDDASKHSSDPHRADAGGDLPPRGGEKLADTANQARAQAIRLQTEK*
Ga0065705_108228531	3300005294	Switchgrass Rhizosphere	FTTEDVARFPFVQSDVAIAANAALREAGIEVPVPQRIVHLEQNDATKHSLGQHRADAGGDLPPGGSESLPDTGNSSPNPVDRSKTDSS*
Ga0070683_1022929672	3300005329	Corn Rhizosphere	GFTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPGKHLSDPHRAHAGGNVPPRGGENLADPAKPSPSSGDRSQSDLS*
Ga0070670_1013109841	3300005331	Switchgrass Rhizosphere	EDALVFVLGFTTENVARFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGRHRADAGGNLPSRGGENLADTPNSNPNPDDRSQTDSS*
Ga0070689_1013697141	3300005340	Switchgrass Rhizosphere	LKQFAEDALVFVLGFTTEEVARFPFVQSDVAVAVNAALRGAGIEIPVPQRIVHLEQNNVNERSLGQHRPDGGGNLSGAGSESVPDAANSNPNPVDQSLIAS*
Ga0070687_1000229321	3300005343	Switchgrass Rhizosphere	RFTFVQSDVAVAVNAALRAAGTEIAYPQRIVHLEQDDNPSKHSSDPHRADGGGNLPPRGGEDLADTVNPSPSSGDSLTI*
Ga0070668_1018368602	3300005347	Switchgrass Rhizosphere	ARIEIAFPQRIVHLAQNDNASKHSLGEQRADAGGNLAPRGSENLADTANASPSPGKRSQSSSTTTG
Ga0070668_1022004301	3300005347	Switchgrass Rhizosphere	DARIEIAFPQRIVHLAQNDNASKHSLGEQRANAGGNLPRRGSENLTDTANASPSPGKRSQSSSTIIV
Ga0070675_1021641862	3300005354	Miscanthus Rhizosphere	VLGFTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPGKHLSDPHRAHAGGNVPPRGGENLADPAKPSPSSGDRSQSDLS*
Ga0070659_1007629132	3300005366	Corn Rhizosphere	FVQSDVAVAVNAALREAGIEIPYPHRIVRLEQNDDASKHSSDPHRADAGGDLPPRGGEKLADTANQARAQAIRLQTEK*
Ga0070667_1020232021	3300005367	Switchgrass Rhizosphere	SDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKHSSDPHRAGVGGNLPRRGGENLADTANPSPSSGDSLAN*
Ga0070709_101225232	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	FVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKGSSDPHRAGAGGNLPLRDGDNLADTGNASLSSGDSLTN*
Ga0070714_1010676632	3300005435	Agricultural Soil	TEEVSRSPFVQSDVAVAVNAALRAAGIEIPFPQRIVHLEQNDNPSKHSSDPHRAGAGGNLPRRDGDNVADTGNASLSSGDSLTN*
Ga0070714_1022381341	3300005435	Agricultural Soil	FVLGFTTEEVGQSPFVQSDVAVAVNAALREAGIEIAFPQRIVHLEQNDNASNHSLGQHRADTGGNSPPRNSENLADTANSGPSSGQHSQTDLS*
Ga0070711_1015762601	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FVLGFTTEDVARFSFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGEHRADASDSLPPGDSESLRDPANSSPNPGDRLQADS*
Ga0070694_1017955301	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GFTTEEVAQFPFVQSDVAVAVNAALRDARIEIAFPQRIVHLAQNDNASKHSLGEQRAEAGGNLAPRGSENLADTANASPSPGKRSQSSSTTTG
Ga0070708_1021078951	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FVLGFTTENVARFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGQHRADAGGNLPSRGGENLADTPNSNPNPDDRSQTDSS*
Ga0066682_108119262	3300005450	Soil	AVLKQFGEDALVFVLGFTTEEVSRSPFVQSDVAVAVNAALRTVGIEIAFPQRIVRLEQNDNPSKHSSDPHRAGAGGNLPPRGGENLDDTADPSPSSGDRSQTDSS*
Ga0068853_1010225172	3300005539	Corn Rhizosphere	ALVFVLGFTTEEVSRFTFVQSDVAVAVNAALREAGIEIPYPHRIVRLEQNDDASKHSSDPHRADAGGDLPPRGGEKLADTANQARAQAIRLQTEK*
Ga0070696_1010214372	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	FVQSDVAVAVNAALRAAGIEIPFPQRIIHLEQNDNPSKRSSDPHRAGAGGNLPPRDGDLADTGNASLSSGDSLTN*
Ga0068855_1022758702	3300005563	Corn Rhizosphere	FVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGQHRADAGGNLPLRGGENLADTPNLNPNPDDRSQTDSS*
Ga0070664_1022481011	3300005564	Corn Rhizosphere	ARFPFVQSDVAVAVNAALRGAGIEIPVPQRIVHLEQNNVNERSLGQHRPDGGGNLSGAGSESVPDAANSNPNPVDQSLIAS*
Ga0066903_1013730061	3300005764	Tropical Forest Soil	TENVAQFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDAARHSLGQHRTPSEGNLPSPGSESIARKATATPSLGQRSKPNPSI*
Ga0066652_1007956642	3300006046	Soil	VQSDVAVAVNAALREGGIDIPVPQRIVHLEQNDATKHSLGHHRGDADGNLPSRVDENLAETASQNPSSGDRPQTDS*
Ga0075434_1005653882	3300006871	Populus Rhizosphere	GEDALVFVLGFTTEDVARFSFVQSDVAVAANAALREAGIEIPVPQRIVHLEQNDATKHSLGQHRADAGGDLPPGGSESLPDTGNSSPNPGDRSKTDSS*
Ga0075424_1015544641	3300006904	Populus Rhizosphere	EDVARFPFVQSDVAVAANAALREAGIEIPVPQRIVRLEQNDNPSKHSSDPHRADAGGNLPTGGSESLPDAANSSPNPGERSQTDSS*
Ga0105250_105459152	3300009092	Switchgrass Rhizosphere	TTEEVSQSPFVKSDVAVAVNAALRAAGIEIAIPQRIVHLEQNDNPSKHSSDPHRADAGGNLPPRGGKKTADTTQASPSSGDSLTN*
Ga0075418_114314191	3300009100	Populus Rhizosphere	KQFGEDALVFVLGFTTEDVARFPFVQSDVAVAANAALREAGIEIPVPQRIVRLEQNDNPSKHSSDPHRADAGGNLPTGGSESLPDAANSSPNPGERSQTDSS*
Ga0105247_106700942	3300009101	Switchgrass Rhizosphere	PFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGQHRADAGGNLPLRGGENLADTPNLNPNPDDRSQTDSS*
Ga0105247_117253942	3300009101	Switchgrass Rhizosphere	FTTEEVAQFPFVQSDVAVAVNAALRDARIEIAFPQRIVHLAQNDNASKHSLGEQRAEAGGNLAPRGSENLADTANASPSPGKRSQSSST*
Ga0114129_102113184	3300009147	Populus Rhizosphere	TEDVARFPFVQSDVAIAANAALREAGIEVPVPQRIVHLEQNDATRHSLGQHRADAGGDLPPGGSESLPDTGNSSPNPGDRSKTDSS*
Ga0105242_111257651	3300009176	Miscanthus Rhizosphere	KQFGEDALVFVLGFTTEQVSQSPFVQSDVAVAVNAALRAAGTEIAYPQRIVHLEQDDNPSKHSSDPHRADGGGNLPPRGGEDLADTVNPSPSSGDSLTI*
Ga0105237_118936642	3300009545	Corn Rhizosphere	TFVQSDVAVAVNAALRAAGTEIAYPQRIVHLEQDDNPSKHSSDPHRADGGGNLPPRGGEDLADTVNPSPSSGDSLTI*
Ga0105249_114702832	3300009553	Switchgrass Rhizosphere	EVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPGKHLSDPHRAHAGGNVPPRGGENLADPAKPSPSSGDRSQSDLS*
Ga0126384_105256441	3300010046	Tropical Forest Soil	LGFTTENVAQFPFVQSDVAVAVNATLREAGIEIPVPQRIVHLEQNDASSHSLGQHRTPSEGTLPQPGSESIARKPAKTPSSGQRSKPNPSM*
Ga0134084_101063081	3300010322	Grasslands Soil	LVFVLGFTTEEVSQFPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNASNKSPQPHRAGTGSNLPPRGGENLADTANASPSSGDSLTK*
Ga0126370_106512441	3300010358	Tropical Forest Soil	KQFSEDALVFVLGFTTENVARFPFVQSDVAVAVNSALREAEIEIPVPQRIVHLEQNDANVHSLGKPRTETSSDLPAGPDEKPADTADPIPNAEDHSQAGSS*
Ga0134128_130235402	3300010373	Terrestrial Soil	EDVARFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGEHRAGASDSLPPKDSESLRDPANSSPNPGDRLQADS*
Ga0126381_1020297112	3300010376	Tropical Forest Soil	EDALVFVLGFTTEDVARSSFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQDDVTKHSLGRHRADASGNLPPGDSESLRDTANSSPNPADRSETDS*
Ga0126381_1035542262	3300010376	Tropical Forest Soil	LVFVLGFTTENVAQFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDASGHSLGEHRAASEGNSPPPGSESVPETPASTASPGQRSNPNPSM*
Ga0134124_125913211	3300010397	Terrestrial Soil	SFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGQHRADAGGNLPSRGGENLADTPNSNPNPDDRSQTDSS*
Ga0126383_102197812	3300010398	Tropical Forest Soil	AVLKQFGEDAFVFVLGFTTEDVARFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKPSLGQHRADASGDLPRGGSENLTDTANSGPNPGHHSQTDS*
Ga0126383_125130262	3300010398	Tropical Forest Soil	DAVLKQFGEDALVFVLGFTTEDVARFTFVQSDVAVAVNAALREAGIAVPVPQRIVHLEQDDATRHSLGQHRADAGGNLPAGGGESPSDTANSSSNPRNRSQTDSS*
Ga0137382_111279782	3300012200	Vadose Zone Soil	VLGFTTEEVSRSPFVQSDVAVAVNAALRTAGIEIAFPQRIVRLEQNDNPSKHSSEPHRAGAGGNLKNLADTENPSPSSGDRSQTER*
Ga0137399_109312631	3300012203	Vadose Zone Soil	SDVAVAVNAALREAGIEIPYPQRIVRLEQDDNARKHSLDPHRVDAGGNLPPRGGENPADRANASPSSGKPSQSSST*
Ga0137399_110803092	3300012203	Vadose Zone Soil	FVLGFTTEEVSRSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKHSSDQHRAGAGGNLPPRAGENLADTANASPSSDDSVTN*
Ga0137413_112877181	3300012924	Vadose Zone Soil	VFVLGFTTEEVSRSPFVQSDVAVAVNAALRAAGIQIAFPQRIVRLEQNDNPSKHASDQHRAGAGGNLPPRGGENLSDAGNASPRSGDSLTK*
Ga0164303_105078812	3300012957	Soil	LVFVLGFTTEEVGRFPFVQSDVAVAVNAALRDARIAIAFPQRIVHLAQNDNASKHSLGEQRANAGGNLPRRGSENLTDTANASPSPGKRSQSSST*
Ga0164303_106105481	3300012957	Soil	ALVFVLGFTTEEVSRSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKHSSDPHRAGAGGNLPPRDGDNLADTGKARLSSGDSLTN*
Ga0164304_109660842	3300012986	Soil	SQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDKPSKHSSDPHRGGAGGNLPPRGGESLADIAKASPSSGDRSKTET*
Ga0164307_114348221	3300012987	Soil	EEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDSDPHRAGVGGTLPRRGGESLADTANPSPSSGDSLTN*
Ga0163162_126988442	3300013306	Switchgrass Rhizosphere	VAVAVNAALRDARIEIAFPQRIVHLAQNDNASKHSLGEQRAEAGGNLAPRGSENLADTANASPSPGKRSQSSST*
Ga0134079_105628882	3300014166	Grasslands Soil	GEGALVFVLGFTTEDVARFPSVQSDVAVAVNAALREGGIDIPVPQRIVHLEQNDATKHSLGHHRGDAGGNLPSRVDENLAETASQNPSSGDRPQTDS*
Ga0163163_122016662	3300014325	Switchgrass Rhizosphere	FPSVQSDVAVAVNAALREAGIEVPVPQRIVHLEQNDATNHSLGQHRADAGGNLPSRGGENLADTPNSNPNPDDRSQTDSS*
Ga0157379_123698502	3300014968	Switchgrass Rhizosphere	VFVLGFTTENVARFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKDSLGQHRGDAGRDLPSRGDENLADAANQSPSSGDRSQTDA*
Ga0132255_1001165681	3300015374	Arabidopsis Rhizosphere	LVFVLGFTTEEVSQAPFVQSDVAVAVNTALRAAGIEIAFPQRIVRLEQNDNPSKHSSDPHRAGAMGNLPPRDGDNLADTANPSPSSGDSLTN*
Ga0132255_1045363042	3300015374	Arabidopsis Rhizosphere	VQSDVAVALNTALRAAGIEIAFPQRIVRLEQKDNPSKHSSDPHRAGAGGNLPPRGGENLADTANLSPSSGDRSQSER*
Ga0182034_102938791	3300016371	Soil	LVFVLGFTTEDVARFPFVQSDVAVAVNGALREAGIEVPVPQRIVQLEQNDATKHSLGQHRTDAGENLPTGGSESLSDTSKSSPNPGDRSQTDSS
Ga0184608_103986823	3300018028	Groundwater Sediment	PFVQSDVAVAVNAALRAAGIEIAFPQRIVHLEQNDNASKHSSDPHRADAGGNLPPRGGENLADTANASPRSGDSLTK
Ga0184620_101509291	3300018051	Groundwater Sediment	GFTTEEVSRSPFVQSDVAVAVNAALRAAGIEIAYPQRIVRLEQNDNASEHSSDPHRADAEGKRGGENLAETANPSPSSGDSLTI
Ga0184619_104287111	3300018061	Groundwater Sediment	NVARFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGQHRGDAGGNLPSRVDQNLADTANQSPSSGDRSQTDS
Ga0173479_101291752	3300019362	Soil	EEVGRFPFVQSDVAVAVNAALRDARIEIAFPQRIVHLAQNDNASKHSLGEQRADAGGNLAPRGSENLADTANASPSPGKRSQSSST
Ga0173479_104283371	3300019362	Soil	VFVLGFTTENVARFPFVQSDVAVAVNAALREAGIEVPVPQRIVHLEQNDATKHSLGQHRADASGNLPPRDSESLRDTANSSPNPGDLSQTDS
Ga0193722_11136211	3300019877	Soil	FTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVHLEQNDNPSKHSSEPHRAGAGSNLSRPGGENLADTETPSPSSGDSLTN
Ga0193725_10970942	3300019883	Soil	QSDVAVAVNAALRAAGIEIAFPQRIVHLEQNDNPSKHSSDPHRAGAGGNLSSPVGENLADTANASPSSGDSLTN
Ga0193725_11290031	3300019883	Soil	FVFVLGFTTENVARFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGQHRGDAGGNLPSRVDQNLADTANQSPSSGDRSQTDS
Ga0193727_11505051	3300019886	Soil	GFTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKHSSDPHRAGAGGNLPPRGGENLADTANPSPSSGDSLTN
Ga0193727_11858861	3300019886	Soil	QSDVAVAVNAALRAAGIEIAYPQRIVRLEQNDNASEHSSDPHRADAEGKRGGENLAETANPSPSSGDSLTI
Ga0193693_10486302	3300019996	Soil	DVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKHSSEPHRAGVGGNLPPRGAEKLADTTKASPSSGDRSKTER
Ga0193755_11155301	3300020004	Soil	GFTTEEVSQFRFVQSDVAVAVNAALRAAGIEIAFPQRIVHLEQNDNVSKHSSDPHRADAGGNSPPRVGENLADTANASPSSGDSLTN
Ga0193755_11310691	3300020004	Soil	FTTENVARFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGQHRGDAGGNLPSRVDQNLADTANQSPSSGDRSQTDS
Ga0193696_11025051	3300020016	Soil	TTEEVSQFRFVQSDVAVAVNAALRAAGIEIAFPQRIVHLEQNDNASKHSSDPHRADAGGNSPPRVGKNLAETANASPSSGDSLTN
Ga0193745_10984851	3300020059	Soil	VSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVHLEQNDNVSKHSSDPHRADAGGNSPPRVGENLADTANASPSSGDSLTN
Ga0179596_105568811	3300021086	Vadose Zone Soil	FTTEEVSRSPFVQSDVAVAVNAALRAAGIEIAFPHRIVHLEQNDNPSKHSSDPRRAGAGGNLPPRGGENLADTGKASASSGDSLTN
Ga0193750_10581181	3300021413	Soil	TTEEVSRFPFVQSDVAVAVNAALQAAGIKIAFPQRIVHLEQNDNPSKPSSDPHRAGAGDNLPPRDGENLDDTASATPGSGDSLTN
Ga0126371_122090762	3300021560	Tropical Forest Soil	FPFVQSDVAVAVNAALRQAGIQIPVPQRIIHLEQNDASKHSLGQHHADAGGNLPPEGSENPLDAANSSPNQGEPTQTDS
Ga0222623_101693802	3300022694	Groundwater Sediment	VLKQFGEDALVFVLGFTTEDVARFPFVQSDVAVAVNAALREVGIEIPVPQRIVHLEQNDNPSKHSSDPHRADARGNLPPRGGENLADRANSSPSSGNPSQSSST
Ga0222622_106737651	3300022756	Groundwater Sediment	VLGFTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKHSSDPHRSGAGGNLPRRGGENLAGTANPSPSSGDSLTN
Ga0207697_102901081	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	TTENVARFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKDSLGQHRGDAGRDLPSRGDENLADAANQSPSSGDRSQTDA
Ga0207685_106990751	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	EEVSQFPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKHSSDPHRAGAGGNLPPRDGDNLADTGNASLSSGDSLTN
Ga0207685_107809491	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	DVAVAVNAALRDARIEIAFPQRIVHLAQNDNASKHSLGEQRANAGGNLPRRGSENLTDTANASPSPGKRSQSSST
Ga0207693_102639491	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKGSSDPHRAGAGGNLPLRDGDNLADTGNASLSSGDSLTN
Ga0207693_105439451	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKHSSDPHRAGAGGNLPPRDGDNLADTGNASLSSGDSLTN
Ga0207662_100129874	3300025918	Switchgrass Rhizosphere	KQFGEDALVFVLGFTTEEVSRFTFVQSDVAVAVNAALRAAGTEIAYPQRIVHLEQDDNPSKHSSDPHRADGGGNLPPRGGEDLADTVNPSPSSGDSLTI
Ga0207687_112893192	3300025927	Miscanthus Rhizosphere	FVLGFTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPGKHLSDPHRAHAGGNVPPRGGENLADPAKPSPSSGDRSQSDLS
Ga0207690_106983852	3300025932	Corn Rhizosphere	TEEVSRFTFVQSDVAVAVNAALREAGIEIPYPHRIVRLEQNDDASKHSSDPHRADAGGDLPPRGGEKLADTANQARAQAIRLQTEK
Ga0207670_105906622	3300025936	Switchgrass Rhizosphere	VLGFTTEEVARFPFVQSDVAVAVNAALRGAGIEIPVPQRIVHLEQNNVNERSLGQHRPDGGGNLSGAGSESVPDAANSNPNPVDQSLIAS
Ga0207712_110218001	3300025961	Switchgrass Rhizosphere	GEDALVFVLGFTTEEVSRFTFVQSDVAVAVNAALREAGIEIPYPHRIVRLEQNDDASKHSSDPHRADAGGDLPPRGGEKLADTANQARAQAIRLQTEK
Ga0207668_119470461	3300025972	Switchgrass Rhizosphere	TEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSKHSSDPHRAGVGGNLPRRGGENLADTANPSPSSGDSLAN
Ga0207639_112183021	3300026041	Corn Rhizosphere	VSRFTFVQSDVAVAVNAALREAGIEIPYPHRIVRLEQNDDASKHSSDPHRADAGGDLPPRGGEKLADTANQARAQAIRLQTEK
Ga0207674_105764831	3300026116	Corn Rhizosphere	SDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGRHRADAGGNLPSRGGENLADTPNSNPNPDDRSQTDSS
Ga0207675_1019681381	3300026118	Switchgrass Rhizosphere	ALVFVLGFTTEEVSRFTFVQSDVAVAVNAALREAGIEIPYPHRIVRLEQNDDASKHSSDPHRADAGGDLPPRGGEKLADTANQARAQAIRLQTEK
Ga0209808_10439711	3300026523	Soil	TTEDVARFPSVQSDVAVAVNAALREGGIDIPVPQRIVHLEQNDATKHSLGHHRGDADGNLPSRVDENLAETASQNPSSGDRPQTDS
Ga0207624_1129342	3300027453	Soil	QSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPGKHLSDPHRAHAGGNVPPRGGENLADPAKPSPSSGDRSQSDLS
Ga0209488_105899653	3300027903	Vadose Zone Soil	FVQSDVAVAVNAALRAAGIEIAFPQRIVHLEQNDNPSKHSSDARRAGAGGNLPPRGGENLADTGNASASSGDSLTN
Ga0307312_103340211	3300028828	Soil	FGEDAFVFVLGFTTENVARFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATKHSLGQHRGDAGGNLPSRVDQNLADTANQSPSSGDRSQTDS
Ga0170834_1093277551	3300031057	Forest Soil	PDVVLKQFGEDALVFVLGFTTEEVSQSLFVQSDVAVAVNAALRAAGIEIAFPLRIVHLEQNDNPSKHSSDQTRTGAVNNLLPRGGENLADAENPRPSSGDSLTN
Ga0170824_1173908161	3300031231	Forest Soil	FGEDALVFVLGFTTEEVSQFPFVQSDVAVAVNAALRDARIEIAFPQRIVHLAQNDNASKHSLGEQRADAGGNLPPRGSENLADTANASPSPGKRSQSSST
Ga0170820_121237112	3300031446	Forest Soil	DALVFVLGFTTEEVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRTVHLEQNDNPSKHSSDQHRAGAGGKLPPRDGDNLADTGNASLSSGDSLTN
Ga0170820_146717652	3300031446	Forest Soil	VLGFTTEEVSQSPFVQSDVAVAVNAALEAAGIEIAFPQRIVHLEQNDNPSKHSSDPHRAGAGGNLPPRDGDLADTGNASLSSGDSLTN
Ga0170818_1135209291	3300031474	Forest Soil	EVSQSPFVQSDVAVAVNAALRAAGIEIAFPQRIVRLEQNDNPSDPHRAGAGSNLSRPGGENLADTETPSPSSGDSLTN
Ga0170818_1138947261	3300031474	Forest Soil	SDVAVAVNAALRDARIEIAFPQRIVHLAQNDNASKHSLGEQRADAGGNLAPRGSENLADTANASPNPGKRSQSSST
Ga0306925_108293102	3300031890	Soil	NVAQFPFVQSDVAVAVNAALREAGIEIPVPQRIVHLEQNDATRHSLGEHRAVSEGNLRPPGSESVPETPASTPSSGRRSKPNPSM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075782

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences