Metagenome / Metatranscriptome Family F075822

Basic Information
Family ID	F075822
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	50 residues
Representative Sequence	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Number of Associated Samples	110
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.51 %
% of genes near scaffold ends (potentially truncated)	40.68 %
% of genes from short scaffolds (< 2000 bps)	88.14 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (97.458 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.949 % of family members)
Environment Ontology (ENVO)	Unclassified (32.203 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.763 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.38% β-sheet: 0.00% Coil/Unstructured: 34.62%
Feature Viewer

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Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00571	CBS	41.53
PF13432	TPR_16	16.95
PF13424	TPR_12	10.17
PF00581	Rhodanese	6.78
PF07721	TPR_4	2.54
PF05544	Pro_racemase	1.69
PF13977	TetR_C_6	1.69
PF13560	HTH_31	1.69
PF02274	ADI	1.69
PF16177	ACAS_N	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	1.69
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	1.69
COG3938	Proline racemase/hydroxyproline epimerase	Amino acid transport and metabolism [E]	1.69
COG4874	Uncharacterized conserved protein	Function unknown [S]	1.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.46 %
Unclassified	root	N/A	2.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.46 %
Unclassified	root	N/A	2.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.46 %
Unclassified	root	N/A	2.54 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	84.75 %
Unclassified	root	N/A	2.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.75 %
Unclassified	root	N/A	2.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.66 %
Unclassified	root	N/A	2.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	29.66 %
Unclassified	root	N/A	2.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.66 %
Unclassified	root	N/A	2.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_10641818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300003267\|soilL1_10038942	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300003321\|soilH1_10199013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1025	Open in IMG/M
3300003323\|rootH1_10117633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1640	Open in IMG/M
3300003987\|Ga0055471_10297121	Not Available	517	Open in IMG/M
3300004114\|Ga0062593_102741429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300004114\|Ga0062593_102865878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300004157\|Ga0062590_101772871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300004463\|Ga0063356_105070789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300004479\|Ga0062595_100139334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1386	Open in IMG/M
3300004479\|Ga0062595_100383188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	998	Open in IMG/M
3300004480\|Ga0062592_100536317	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300004785\|Ga0058858_1410794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300004798\|Ga0058859_11699066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300004803\|Ga0058862_12808439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300005294\|Ga0065705_10356914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	933	Open in IMG/M
3300005329\|Ga0070683_100092814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2835	Open in IMG/M
3300005329\|Ga0070683_101974737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300005331\|Ga0070670_100234906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1596	Open in IMG/M
3300005332\|Ga0066388_100307405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2231	Open in IMG/M
3300005338\|Ga0068868_100332945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1296	Open in IMG/M
3300005338\|Ga0068868_101371153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300005339\|Ga0070660_100996174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300005344\|Ga0070661_100385278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300005353\|Ga0070669_101490421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300005366\|Ga0070659_100648900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	910	Open in IMG/M
3300005438\|Ga0070701_10025190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2886	Open in IMG/M
3300005441\|Ga0070700_100024152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3565	Open in IMG/M
3300005444\|Ga0070694_100486841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300005459\|Ga0068867_100969718	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300005471\|Ga0070698_101359113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300005530\|Ga0070679_101471603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300005547\|Ga0070693_101579389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300005615\|Ga0070702_100322072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1078	Open in IMG/M
3300005617\|Ga0068859_102993232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300006844\|Ga0075428_100180032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2289	Open in IMG/M
3300006881\|Ga0068865_100339602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300009098\|Ga0105245_10888115	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300009147\|Ga0114129_12178430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300009553\|Ga0105249_10764305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1029	Open in IMG/M
3300009789\|Ga0126307_10001432	All Organisms → cellular organisms → Bacteria	15749	Open in IMG/M
3300010044\|Ga0126310_11180203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300010371\|Ga0134125_11386644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300010396\|Ga0134126_12049185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300010399\|Ga0134127_11964964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300010400\|Ga0134122_10855486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	874	Open in IMG/M
3300010403\|Ga0134123_10454751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1191	Open in IMG/M
3300011332\|Ga0126317_10181353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300011332\|Ga0126317_10458405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	908	Open in IMG/M
3300012212\|Ga0150985_122965273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300012373\|Ga0134042_1166422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300012912\|Ga0157306_10072122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	931	Open in IMG/M
3300013096\|Ga0157307_1056546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300013100\|Ga0157373_10692522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300013296\|Ga0157374_12278711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300013296\|Ga0157374_12709449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300013297\|Ga0157378_11273748	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300014254\|Ga0075312_1015774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1294	Open in IMG/M
3300014325\|Ga0163163_10342369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1551	Open in IMG/M
3300015077\|Ga0173483_10034401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1864	Open in IMG/M
3300015200\|Ga0173480_10743152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300017965\|Ga0190266_10003214	All Organisms → cellular organisms → Bacteria	3413	Open in IMG/M
3300018067\|Ga0184611_1273619	Not Available	592	Open in IMG/M
3300018469\|Ga0190270_11822834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300019259\|Ga0184646_1602060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	798	Open in IMG/M
3300019269\|Ga0184644_1281501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1296	Open in IMG/M
3300019356\|Ga0173481_10013762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2342	Open in IMG/M
3300019361\|Ga0173482_10103550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1037	Open in IMG/M
3300019361\|Ga0173482_10241885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300019362\|Ga0173479_10058649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300019876\|Ga0193703_1047394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300020005\|Ga0193697_1002216	All Organisms → cellular organisms → Bacteria	5205	Open in IMG/M
3300020078\|Ga0206352_10337985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300020080\|Ga0206350_10569963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300020082\|Ga0206353_11177056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300021510\|Ga0222621_1027009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300022756\|Ga0222622_10102011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1766	Open in IMG/M
3300022898\|Ga0247745_1034167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	767	Open in IMG/M
3300023071\|Ga0247752_1020315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300025559\|Ga0210087_1056463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300025899\|Ga0207642_11089014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300025901\|Ga0207688_10068933	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300025910\|Ga0207684_11265640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300025918\|Ga0207662_10584412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300025920\|Ga0207649_10599315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300025923\|Ga0207681_10558700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	943	Open in IMG/M
3300025926\|Ga0207659_11025327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300025927\|Ga0207687_10828929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300025932\|Ga0207690_11856206	Not Available	503	Open in IMG/M
3300025934\|Ga0207686_10583427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300025934\|Ga0207686_10854654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300026116\|Ga0207674_11029532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300026118\|Ga0207675_100478623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1237	Open in IMG/M
3300027717\|Ga0209998_10010678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1902	Open in IMG/M
3300027907\|Ga0207428_10009317	All Organisms → cellular organisms → Bacteria	8808	Open in IMG/M
3300028589\|Ga0247818_11313074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300028722\|Ga0307319_10011078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2746	Open in IMG/M
3300028796\|Ga0307287_10074256	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300028814\|Ga0307302_10564902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300028875\|Ga0307289_10139015	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300028880\|Ga0307300_10007636	All Organisms → cellular organisms → Bacteria	2734	Open in IMG/M
3300028885\|Ga0307304_10330543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300030552\|Ga0247654_1008685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300030905\|Ga0308200_1011916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1266	Open in IMG/M
3300031125\|Ga0308182_1010694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300031548\|Ga0307408_100226860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1527	Open in IMG/M
3300031731\|Ga0307405_10015154	All Organisms → cellular organisms → Bacteria	4166	Open in IMG/M
3300031824\|Ga0307413_10656476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	866	Open in IMG/M
3300031911\|Ga0307412_10402174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1115	Open in IMG/M
3300031943\|Ga0310885_10059563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1616	Open in IMG/M
3300032012\|Ga0310902_10370150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	904	Open in IMG/M
3300032075\|Ga0310890_10108926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1754	Open in IMG/M
3300032180\|Ga0307471_101087200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300034661\|Ga0314782_053997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300034662\|Ga0314783_037534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300034667\|Ga0314792_138863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300034669\|Ga0314794_060417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300034677\|Ga0314802_009755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.41%
Host-Associated	Host-Associated	35.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.78%
Plants	Host-Associated → Plants	33.05%
Aquatic	Environmental → Aquatic	7.63%
Human	Host-Associated → Human	2.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.17%
Freshwater	Environmental → Aquatic → Freshwater	3.39%
Sediment	Environmental → Aquatic → Sediment	2.54%
Digestive System	Host-Associated → Human → Digestive System	2.54%
Marine	Environmental → Aquatic → Marine	1.69%
Roots	Host-Associated → Plants → Roots	0.85%
Rhizome	Host-Associated → Plants → Rhizome	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.56%
Loam	Environmental → Terrestrial → Soil → Loam	10.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.54%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.54%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.47%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.54%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.54%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.08%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.54%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.54%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.54%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.69%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.69%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.69%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030552	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db7 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034669	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034677	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_106418181	3300000890	Soil	MLEFRVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLG
soilL1_100389424	3300003267	Sugarcane Root And Bulk Soil	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL*
soilH1_101990133	3300003321	Sugarcane Root And Bulk Soil	MLEFRVEGFAAREPEFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL*
rootH1_101176332	3300003323	Sugarcane Root And Bulk Soil	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGASGLIVAQLL*
Ga0055471_102971211	3300003987	Natural And Restored Wetlands	MLEFHVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAALWLGAAGLIAAQLL*
Ga0062593_1027414291	3300004114	Soil	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL*
Ga0062593_1028658781	3300004114	Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0062590_1017728712	3300004157	Soil	MLEFCVEVMRRASRDFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL*
Ga0063356_1050707891	3300004463	Arabidopsis Thaliana Rhizosphere	RRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL*
Ga0062595_1001393343	3300004479	Soil	VEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0062595_1003831882	3300004479	Soil	MLEFRVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLF*
Ga0062592_1005363173	3300004480	Soil	LRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL*
Ga0058858_14107941	3300004785	Host-Associated	MLEFHVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0058859_116990661	3300004798	Host-Associated	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0058862_128084391	3300004803	Host-Associated	MLEFCVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGFWLGAAAMIAAQLL
Ga0065705_103569141	3300005294	Switchgrass Rhizosphere	EFRVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL*
Ga0070683_1000928144	3300005329	Corn Rhizosphere	MLEFHVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0070683_1019747371	3300005329	Corn Rhizosphere	LRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL*
Ga0070670_1002349061	3300005331	Switchgrass Rhizosphere	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGFWLGAAAMIAAQLL*
Ga0066388_1003074053	3300005332	Tropical Forest Soil	MLQFRGEVMRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAALIAAQLL*
Ga0068868_1003329453	3300005338	Miscanthus Rhizosphere	RRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLF*
Ga0068868_1013711531	3300005338	Miscanthus Rhizosphere	RVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL*
Ga0070660_1009961742	3300005339	Corn Rhizosphere	MLQFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0070661_1003852783	3300005344	Corn Rhizosphere	LRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0070669_1014904211	3300005353	Switchgrass Rhizosphere	MLEFHVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL*
Ga0070659_1006489002	3300005366	Corn Rhizosphere	MLEFRVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL*
Ga0070701_100251903	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MPEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0070700_1000241522	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLQFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL*
Ga0070694_1004868411	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MLEFCVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL*
Ga0068867_1009697182	3300005459	Miscanthus Rhizosphere	MLEFCVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLF*
Ga0070698_1013591132	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLF*
Ga0070679_1014716032	3300005530	Corn Rhizosphere	FRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGFWLGAAAMIAAQLL*
Ga0070693_1015793892	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGMIVAQLL*
Ga0070702_1003220721	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	FRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0068859_1029932322	3300005617	Switchgrass Rhizosphere	MLEFCVEGMRRASRDFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL*
Ga0075428_1001800323	3300006844	Populus Rhizosphere	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLLGTLAGLWLGAAAMIAAQLL*
Ga0068865_1003396022	3300006881	Miscanthus Rhizosphere	MLQFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLF*
Ga0105245_108881153	3300009098	Miscanthus Rhizosphere	LRRASREFFFDMEPRPSLRPLAPLIGTLAGFWLGAAAMIAAQLL*
Ga0114129_121784302	3300009147	Populus Rhizosphere	MLEFRVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAA
Ga0105249_107643051	3300009553	Switchgrass Rhizosphere	MLQFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGA
Ga0126307_100014325	3300009789	Serpentine Soil	MHEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL*
Ga0126310_111802032	3300010044	Serpentine Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAACLIAAQLL*
Ga0134125_113866443	3300010371	Terrestrial Soil	MLEFRVEGLRRASREFFFDMEQRPSLRPLAPLIGTWAGLWLGAAGMIVAQLL*
Ga0134126_120491852	3300010396	Terrestrial Soil	MLEFRVEGLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGMIVAQLL*
Ga0134127_119649641	3300010399	Terrestrial Soil	AGRMPEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0134122_108554861	3300010400	Terrestrial Soil	RRMLQFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGMIVAQLL*
Ga0134123_104547511	3300010403	Terrestrial Soil	MLQFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQ
Ga0126317_101813532	3300011332	Soil	MLEFRVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0126317_104584052	3300011332	Soil	MLEFRVEVLRRASRDFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL*
Ga0150985_1229652732	3300012212	Avena Fatua Rhizosphere	MFEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0134042_11664222	3300012373	Grasslands Soil	MLAFSVEGMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL*
Ga0157306_100721222	3300012912	Soil	MFEFRAEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL*
Ga0157307_10565461	3300013096	Soil	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGL
Ga0157373_106925223	3300013100	Corn Rhizosphere	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGMIVAQLL*
Ga0157374_122787111	3300013296	Miscanthus Rhizosphere	MLEFCVEVMRRASREFFFDMEPRPSLRPLAPLIGTL
Ga0157374_127094492	3300013296	Miscanthus Rhizosphere	MLEFCVEVMRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0157378_112737481	3300013297	Miscanthus Rhizosphere	VEVLRRASREFFFDMKQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0075312_10157743	3300014254	Natural And Restored Wetlands	MLEFRVEVLRRASRELFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL*
Ga0163163_103423692	3300014325	Switchgrass Rhizosphere	MLEFHVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAATIAAQLL*
Ga0173483_100344013	3300015077	Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAVMIAAQLL*
Ga0173480_107431522	3300015200	Soil	KRRMLEFRVEVLRRASREFFLDMEQRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL*
Ga0190266_100032144	3300017965	Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0184611_12736192	3300018067	Groundwater Sediment	MLQFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0190270_118228342	3300018469	Soil	RRSFAAREPRIFFDMEPRPSLRPLAPLIGTLAGLWLGAAGMIAAQLL
Ga0184646_16020602	3300019259	Groundwater Sediment	MREFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWVGAAAMIAVQLL
Ga0184644_12815012	3300019269	Groundwater Sediment	MREFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0173481_100137623	3300019356	Soil	MLQFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL
Ga0173482_101035503	3300019361	Soil	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL
Ga0173482_102418853	3300019361	Soil	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0173479_100586492	3300019362	Soil	MLQFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0193703_10473941	3300019876	Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLW
Ga0193697_10022165	3300020005	Soil	MREFRVEVLRRASREFFFDMEPRPSLRPLAPLIGILAGLWLGAAAMIAAQLL
Ga0206352_103379851	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MLQFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLYKYEM
Ga0206350_105699631	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGFWLGAAAMIAAQLL
Ga0206353_111770562	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL
Ga0222621_10270091	3300021510	Groundwater Sediment	MLEFRVEDLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQ
Ga0222622_101020111	3300022756	Groundwater Sediment	MREFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLA
Ga0247745_10341672	3300022898	Soil	MLEFHVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWL
Ga0247752_10203152	3300023071	Soil	MFEFRAEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0210087_10564632	3300025559	Natural And Restored Wetlands	MLEFRVEVLRRASRELFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0207642_110890142	3300025899	Miscanthus Rhizosphere	MLEFRVEVLRRASREFFFDMEQRPSLLPLAPLIGTLAGLWLG
Ga0207688_100689331	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	RMLEFHVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0207684_112656402	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAG
Ga0207662_105844122	3300025918	Switchgrass Rhizosphere	MLEFRVEVMRRASREFFFDMEPRPSLRPLAPLIGTL
Ga0207649_105993152	3300025920	Corn Rhizosphere	MLEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLW
Ga0207681_105587002	3300025923	Switchgrass Rhizosphere	MLEFHVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL
Ga0207659_110253271	3300025926	Miscanthus Rhizosphere	MLEFHVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMI
Ga0207687_108289291	3300025927	Miscanthus Rhizosphere	MLEFRVEVMRRASREFFFDMEPRPSLRPLAPLIGT
Ga0207690_118562061	3300025932	Corn Rhizosphere	MLEFRVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL
Ga0207686_105834272	3300025934	Miscanthus Rhizosphere	MLEFCVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLF
Ga0207686_108546541	3300025934	Miscanthus Rhizosphere	MPEFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0207674_110295321	3300026116	Corn Rhizosphere	MLQFRVEVLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAA
Ga0207675_1004786232	3300026118	Switchgrass Rhizosphere	MLEFRVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLF
Ga0209998_100106783	3300027717	Arabidopsis Thaliana Rhizosphere	MLQFRVEVLRRASREFFFDMEQRPSLRPLAPLIGALAGLWLGATGLIVAQLL
Ga0207428_100093177	3300027907	Populus Rhizosphere	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLLGTLAGLWLGAAAMIAAQLL
Ga0247818_113130741	3300028589	Soil	MREFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAM
Ga0307319_100110783	3300028722	Soil	MLEFRVEDLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWVGAAAMIAVQLL
Ga0307287_100742561	3300028796	Soil	EFRVEDLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWVGAAAMIAVQLL
Ga0307302_105649022	3300028814	Soil	LRRASREFFFDMEPRPSLRPLAPLIGTLAGLWVGAAAMIAVQLL
Ga0307289_101390153	3300028875	Soil	FRVEDLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWVGAAAMIAVQLL
Ga0307300_100076361	3300028880	Soil	GRMLEFRVEDLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWVGAAAMIAVQLL
Ga0307304_103305432	3300028885	Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQ
Ga0247654_10086852	3300030552	Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAVQLL
Ga0308200_10119162	3300030905	Soil	MLEFRVEDLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0308182_10106941	3300031125	Soil	MREFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQLL
Ga0307408_1002268602	3300031548	Rhizosphere	MLEFRVEVCGARAEKFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGMIAAQLL
Ga0307405_100151542	3300031731	Rhizosphere	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIAVQLF
Ga0307413_106564762	3300031824	Rhizosphere	MLEFRVEVCGARAEKFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0307412_104021741	3300031911	Rhizosphere	MLEFRVEVCGARAEKFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIAVQLF
Ga0310885_100595631	3300031943	Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLLGTLAGLWLGAAA
Ga0310902_103701501	3300032012	Soil	MLEFRVEGLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAA
Ga0310890_101089263	3300032075	Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGPWLGAAAMIAAQLL
Ga0307471_1010872001	3300032180	Hardwood Forest Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIVAQ
Ga0314782_053997_580_717	3300034661	Soil	VLRRASREFFFDMEQRPSLRPLAPLIGTLAGLWLGAAGLIAAQLL
Ga0314783_037534_155_313	3300034662	Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGFWLGAGAMIAAQLL
Ga0314792_138863_475_633	3300034667	Soil	MLEFRVEVMRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAGLIAAQLF
Ga0314794_060417_202_360	3300034669	Soil	MLEVRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAGLWLGAAAMIAAQLL
Ga0314802_009755_3_116	3300034677	Soil	MLEFRVEVLRRASREFFFDMEPRPSLRPLAPLIGTLAG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075822

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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