NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F075885

Metagenome / Metatranscriptome Family F075885

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075885
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 81 residues
Representative Sequence MQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVARFIVNANHGIM
Number of Associated Samples 100
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.50 %
% of genes near scaffold ends (potentially truncated) 32.20 %
% of genes from short scaffolds (< 2000 bps) 81.36 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.153 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(22.881 % of family members)
Environment Ontology (ENVO) Unclassified
(42.373 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.542 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.75%    β-sheet: 0.00%    Coil/Unstructured: 52.25%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF07883Cupin_2 5.08
PF08734GYD 3.39
PF00106adh_short 2.54
PF08299Bac_DnaA_C 2.54
PF13561adh_short_C2 1.69
PF06315AceK_kinase 1.69
PF08238Sel1 0.85
PF12975DUF3859 0.85
PF05866RusA 0.85
PF00155Aminotran_1_2 0.85
PF02371Transposase_20 0.85
PF01694Rhomboid 0.85
PF00589Phage_integrase 0.85
PF13884Peptidase_S74 0.85
PF14534DUF4440 0.85
PF03547Mem_trans 0.85
PF04519Bactofilin 0.85
PF04355SmpA_OmlA 0.85
PF01797Y1_Tnp 0.85
PF06803DUF1232 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 3.39
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 2.54
COG4579Isocitrate dehydrogenase kinase/phosphataseSignal transduction mechanisms [T] 1.69
COG0679Predicted permease, AEC (auxin efflux carrier) familyGeneral function prediction only [R] 0.85
COG0705Membrane-associated serine protease, rhomboid familyPosttranslational modification, protein turnover, chaperones [O] 0.85
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 0.85
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.85
COG2913Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complexCell wall/membrane/envelope biogenesis [M] 0.85
COG3339Uncharacterized membrane protein YkvA, DUF1232 familyFunction unknown [S] 0.85
COG3547TransposaseMobilome: prophages, transposons [X] 0.85
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.15 %
UnclassifiedrootN/A0.85 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459010|GIO7OMY01CYF7NAll Organisms → cellular organisms → Bacteria505Open in IMG/M
2189573005|GZGK9D402HQKFSAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia505Open in IMG/M
3300005166|Ga0066674_10181906All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium998Open in IMG/M
3300005172|Ga0066683_10554819All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia700Open in IMG/M
3300005175|Ga0066673_10043242All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2238Open in IMG/M
3300005180|Ga0066685_10729649All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300005181|Ga0066678_10247686All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1152Open in IMG/M
3300005186|Ga0066676_10545208All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia786Open in IMG/M
3300005186|Ga0066676_10650034All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia716Open in IMG/M
3300005186|Ga0066676_10840582All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005187|Ga0066675_10404287All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1008Open in IMG/M
3300005295|Ga0065707_10458940All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium793Open in IMG/M
3300005467|Ga0070706_100579048All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1044Open in IMG/M
3300005471|Ga0070698_100511092All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1139Open in IMG/M
3300005554|Ga0066661_10502886All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia732Open in IMG/M
3300005557|Ga0066704_10255032All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1191Open in IMG/M
3300005559|Ga0066700_10681870All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia707Open in IMG/M
3300005566|Ga0066693_10039752All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1529Open in IMG/M
3300005568|Ga0066703_10043405All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2488Open in IMG/M
3300005574|Ga0066694_10072347All Organisms → cellular organisms → Bacteria1588Open in IMG/M
3300006031|Ga0066651_10064628All Organisms → cellular organisms → Bacteria1753Open in IMG/M
3300006032|Ga0066696_10707869All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300006797|Ga0066659_10928117All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300007076|Ga0075435_101978843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium bohemicum → Mycobacterium bohemicum DSM 44277512Open in IMG/M
3300007255|Ga0099791_10294195All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium774Open in IMG/M
3300009038|Ga0099829_10723222All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300009137|Ga0066709_100111864All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3383Open in IMG/M
3300010301|Ga0134070_10111248All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium961Open in IMG/M
3300010321|Ga0134067_10051762All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1324Open in IMG/M
3300010323|Ga0134086_10085580All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1102Open in IMG/M
3300010323|Ga0134086_10123762All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia929Open in IMG/M
3300010333|Ga0134080_10361667All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia663Open in IMG/M
3300010335|Ga0134063_10255304All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia835Open in IMG/M
3300010337|Ga0134062_10809253All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia502Open in IMG/M
3300011003|Ga0138514_100008269All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1633Open in IMG/M
3300012198|Ga0137364_10058428All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae2597Open in IMG/M
3300012198|Ga0137364_10831946All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia698Open in IMG/M
3300012199|Ga0137383_10329978All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1117Open in IMG/M
3300012202|Ga0137363_10036872All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3419Open in IMG/M
3300012202|Ga0137363_10685572All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300012205|Ga0137362_10332235All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1316Open in IMG/M
3300012206|Ga0137380_10581118All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia981Open in IMG/M
3300012207|Ga0137381_11368223All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium600Open in IMG/M
3300012209|Ga0137379_10232500All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1757Open in IMG/M
3300012210|Ga0137378_11204006All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300012211|Ga0137377_11005432All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300012285|Ga0137370_10567942All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia699Open in IMG/M
3300012351|Ga0137386_10262637All Organisms → cellular organisms → Bacteria1242Open in IMG/M
3300012355|Ga0137369_10892304All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium598Open in IMG/M
3300012356|Ga0137371_10779288All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia729Open in IMG/M
3300012357|Ga0137384_10386313All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1157Open in IMG/M
3300012357|Ga0137384_10647990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium860Open in IMG/M
3300012357|Ga0137384_11590787All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium503Open in IMG/M
3300012917|Ga0137395_11101163All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300012922|Ga0137394_10545468All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia983Open in IMG/M
3300012925|Ga0137419_11845449All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia518Open in IMG/M
3300012951|Ga0164300_10037914All Organisms → cellular organisms → Bacteria1826Open in IMG/M
3300012960|Ga0164301_10234745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium1193Open in IMG/M
3300012976|Ga0134076_10261240All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300012986|Ga0164304_11737060All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300012987|Ga0164307_10204460All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1347Open in IMG/M
3300012989|Ga0164305_10048061All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2479Open in IMG/M
3300014154|Ga0134075_10322725All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia674Open in IMG/M
3300014166|Ga0134079_10069764All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1280Open in IMG/M
3300015053|Ga0137405_1035418All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2218Open in IMG/M
3300015053|Ga0137405_1148976All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1794Open in IMG/M
3300015356|Ga0134073_10000515All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia6973Open in IMG/M
3300015359|Ga0134085_10235106All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia795Open in IMG/M
3300018028|Ga0184608_10209480All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium855Open in IMG/M
3300018071|Ga0184618_10032300All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1807Open in IMG/M
3300018431|Ga0066655_10584674All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium750Open in IMG/M
3300018433|Ga0066667_10012833All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium4132Open in IMG/M
3300018433|Ga0066667_10309988All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1233Open in IMG/M
3300018433|Ga0066667_11103785All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia687Open in IMG/M
3300018482|Ga0066669_10507277All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300018482|Ga0066669_12187671All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300019362|Ga0173479_10408735All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300019789|Ga0137408_1144770All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2892Open in IMG/M
3300019878|Ga0193715_1080098All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia678Open in IMG/M
3300019886|Ga0193727_1002288All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus8071Open in IMG/M
3300019886|Ga0193727_1022953All Organisms → cellular organisms → Bacteria2209Open in IMG/M
3300019887|Ga0193729_1010926All Organisms → cellular organisms → Bacteria4088Open in IMG/M
3300020006|Ga0193735_1131140All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia671Open in IMG/M
3300022534|Ga0224452_1058305All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1153Open in IMG/M
3300022694|Ga0222623_10021609All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2407Open in IMG/M
3300025922|Ga0207646_10506322All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1088Open in IMG/M
3300026324|Ga0209470_1010498All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium5526Open in IMG/M
3300026324|Ga0209470_1129327All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1118Open in IMG/M
3300026329|Ga0209375_1024628All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3373Open in IMG/M
3300026329|Ga0209375_1077502All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1551Open in IMG/M
3300026330|Ga0209473_1008552All Organisms → cellular organisms → Bacteria5170Open in IMG/M
3300026343|Ga0209159_1244131All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300026523|Ga0209808_1096355All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1254Open in IMG/M
3300026537|Ga0209157_1035370All Organisms → cellular organisms → Bacteria2830Open in IMG/M
3300026547|Ga0209156_10153808All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1114Open in IMG/M
3300026551|Ga0209648_10047999All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3669Open in IMG/M
3300026551|Ga0209648_10163654All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1742Open in IMG/M
3300027617|Ga0210002_1068244All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium625Open in IMG/M
3300028536|Ga0137415_11356481All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300028673|Ga0257175_1017586All Organisms → cellular organisms → Bacteria1157Open in IMG/M
3300028793|Ga0307299_10164710All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium835Open in IMG/M
3300028814|Ga0307302_10018311All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3163Open in IMG/M
3300028878|Ga0307278_10000267All Organisms → cellular organisms → Bacteria26716Open in IMG/M
3300028878|Ga0307278_10246578All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300030842|Ga0075404_11494354All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300030967|Ga0075399_11207153All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300031057|Ga0170834_113266256All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia500Open in IMG/M
3300031231|Ga0170824_124432398All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1551Open in IMG/M
3300031231|Ga0170824_124781380All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300031474|Ga0170818_109992645All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300031474|Ga0170818_113919776All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300031716|Ga0310813_10963014All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia776Open in IMG/M
3300031740|Ga0307468_100664543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium864Open in IMG/M
3300031823|Ga0307478_11559844All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300032205|Ga0307472_102216515All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300033412|Ga0310810_11024567All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300033475|Ga0310811_10746319All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia931Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil22.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.25%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil10.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.63%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.54%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.54%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.69%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.69%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.85%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.85%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
2189573005Grass soil microbial communities from Rothamsted Park, UK - FG3 (Nitrogen)EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027617Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300030842Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030967Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_036440002170459010Grass SoilMQQPADVVVRPATKXVPRXVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASSLLPEIALVLVRFDHVASCIVNANHDIM
FG3_097750202189573005Grass SoilMQKPADVVVRPAIKHVPRSVVRDTQERIVRCGLGIVPISSETEDKFEDAMEVAASSPLFEIARVLVR
Ga0066674_1018190623300005166SoilMQQPANVVVRPALKDVPRSVVRNAHERIVGCGLGIVPADSETEDKFEDAMEVTASSPLPEIARVLVRFDHVARLIVNVNHSVM*
Ga0066683_1055481923300005172SoilQMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVTQIGSASEIGSTPR*
Ga0066673_1004324233300005175SoilVVVRPAIRHVPRSVVRNAHERIVHCGLGIVPAGSETEDKFEDAMEVTASSPLPEIARVLVRFGHVASFIVNANDGVV*
Ga0066685_1072964933300005180SoilRPAIRHVPRSVVCDAHERIVRCCGLGIVPVSSETEDKFEDAMEVTASSPLFEIASVLVRPDYVTSVIANATCSTISLTPSDP*
Ga0066678_1024768623300005181SoilMQQPTDVVVRPAIKHVPRSVVCDAHERIVRCGLGIVPVSSETEDRFEDAMEVTASSPLPETARVIVRLDHVARCIINADHSVM*
Ga0066676_1054520823300005186SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVASF
Ga0066676_1065003423300005186SoilMQQPAGVVVRPAIRHVPRSVVCDAHERIVRCCGLGIVPVSSETEDKFEDAMEVTASSPLFEIASVLVRPDHVARFIEHANHGIV*
Ga0066676_1084058223300005186SoilMQQPADVVVRPAIKHVPRSVARDAHERIVRCGLGIVPVRSETEDKFEDAMEVTASSPLFELSHVLVRFNQVARFIVNANHGII*
Ga0066675_1040428733300005187SoilMQQPAGVVVRPAIRHVPRSVVCDAHERIVRCCGLGIVPVSSETEDKFEDAMEVTASSPLFEIASVLVRPDYVTSVIANATCSTISLTPSDP*
Ga0065707_1045894013300005295Switchgrass RhizosphereMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLLQIALVFVRLNHGASVIVHADDGST*
Ga0070706_10057904813300005467Corn, Switchgrass And Miscanthus RhizosphereMQQPAGVVVRPAIRRVPRSVVCDAHERIVRCGLGIVPISSETEDKFEDAMEVTASSPLPEIARVLVRFDHLARFIVNANHGMM*
Ga0070698_10051109223300005471Corn, Switchgrass And Miscanthus RhizosphereVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLFKIARVLVRFDHVARFIENANHSAT*
Ga0066661_1050288613300005554SoilMQQPADVVVRPAIKHAPRSVVCDAHERIVRCGLGIVPVSSETEDRFEDAMEVTASSPLPETARVIVRLDHVARCIIN
Ga0066704_1025503233300005557SoilSRERQMQQPADVVVRPAIKHVPRSVVCDAHERIVRCGLGIVPVSSETEDRFEDAMEVTASSPLPETARVIVRLDHVARCIINADHSVM*
Ga0066700_1068187023300005559SoilMQQPTDVVVRPAIKHVPRSVVREAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLFEIARVLVRFDHVARVIV
Ga0066693_1003975213300005566SoilVPRSVVRNAHERIVHCGLGIVPAGSETEDKFEDAMEVTASSPLPEIARVLVRFGHVASFIVNANDGVV*
Ga0066703_1004340523300005568SoilMQQPADVVVRPAIKHAPRSVVCDAHERIVRCGLGIVPVSSETEDRFEDAMEVTASSPLPETARVIVRLDHVARCIINADHSVM*
Ga0066694_1007234733300005574SoilMQQPAGVVVRPAIRHVPRSVVCDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLFEIASVLVRPDYVTSVIANATCSTISLTPSDP*
Ga0066651_1006462833300006031SoilIKHVPRSVVRDAHERIVRCGLGIVPVRSETEDKFEDAMEVTASSPLPELARVLQRFNHVASIIVNANHSIM*
Ga0066696_1070786923300006032SoilQMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVTQIGSASEIRLTQR*
Ga0066659_1092811723300006797SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLPEIARVLLRFNHVASFIKYPDHIIV*
Ga0075435_10197884323300007076Populus RhizosphereMQQPADVVVRPAIKHVPRSVVCDAHERIVRCGLGIVPVSSETEDKFEDAMEGTASSPLLKIARVLVRLNHVASIIVNVIALEIEPAED*
Ga0099791_1029419523300007255Vadose Zone SoilMQQPGGMVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLFEIARVLLRFR*
Ga0099829_1072322233300009038Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVCDAHERIVRCALGIVPVSSETEDKFGDAMEVTASSPLFQIALVLVHFDPRCQS*
Ga0066709_10011186423300009137Grasslands SoilMQQPADVVVCPAIKHVPRSVVRNAHERIVRCGLGIVPVSSETEDNFEDAMEVTASSPLPEIARVLLRLDHIASFIVNANHPVV*
Ga0134070_1011124823300010301Grasslands SoilMQQPANVVVRPALKDVPRSVVRNAHERIVGCGLGIVPAESETEDKFEDAMEVTASSPLPEIARVLVRFDHVARLIVNVNHSVM*
Ga0134067_1005176213300010321Grasslands SoilMQQPANVVVRPALKDVPRSVVRNAHERIVGCGLGIVPADSETEDKFEDAMEVTASSPLPEIARVLVRFDHVTRLIVNVNHSVM*
Ga0134086_1008558013300010323Grasslands SoilVVVRPAIKQVPRSVVRNAHERIVGCGLGIVPADSETEDKFEDAMEVTASSPLPEIARVLVRFDHVARLIVNVNHSVM*
Ga0134086_1012376213300010323Grasslands SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVASFIVNANYSIG*
Ga0134080_1036166723300010333Grasslands SoilMQQPAGVVVRPAIRHVPRSVVCDAHERIVRCCGLGIVPVSSETEDKFEDAMEVTASSPLPEIARVLVRFGHVASFIVNANDGVV*
Ga0134063_1025530413300010335Grasslands SoilMQQPAGMVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVRSETEDKFEDAMEVTASSPLPELARVLLRLDLL*
Ga0134062_1080925323300010337Grasslands SoilMQQPAGMVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVASFIVNANH
Ga0138514_10000826913300011003SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLPEIARVLLRFDHVAYCIVNANHSIM*
Ga0137364_1005842873300012198Vadose Zone SoilRERQMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAIEVTASSPLFEIARVLVRLAHAACLIVHANHSIM*
Ga0137364_1083194623300012198Vadose Zone SoilRERQMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVTQIGSASEIGSTPR*
Ga0137383_1032997823300012199Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVTQIGSASEIGSTPR*
Ga0137363_1003687223300012202Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSCETEDKFEDAMEVTASSPLFEIARVLVRLDHAASFIVNANDGVL*
Ga0137363_1068557223300012202Vadose Zone SoilVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDRFEDAMEVTTSSPLPEIARVLVRFDHIVRIINADHSPM*
Ga0137362_1033223513300012205Vadose Zone SoilERQMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPISSETEDKFEDAMEVTASSPLPEIARVLVRFDHLARFIVNANHGMM*
Ga0137380_1058111823300012206Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEKARVLVRLDHVGRLIVTQIGSASEIGSTPR*
Ga0137381_1136822313300012207Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVTQIGSASEI
Ga0137379_1023250023300012209Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLPELARVLVRFR*
Ga0137378_1120400623300012210Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHAARFIVNADHSIV*
Ga0137377_1100543223300012211Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVTQIGSASEIRSTPR*
Ga0137370_1056794213300012285Vadose Zone SoilSRERQMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVTQIGSASEIGSTPR*
Ga0137386_1026263723300012351Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVTQIGSASEIRLTQR*
Ga0137369_1089230423300012355Vadose Zone SoilMQQPADVVVRPAIKHVPRTVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSTLFELARVLVCLDHFASLIVNANHSIPIRLAKLAWFFQTLRI*
Ga0137371_1077928813300012356Vadose Zone SoilHRNEESRERQMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVTQIGSASEIGPTPR*
Ga0137384_1038631313300012357Vadose Zone SoilMQQPADVVVRPAIKHVPRTVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLPELARVLVRFR*
Ga0137384_1064799013300012357Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLVIVPVGSETEDKFEDAMEVTASSPFFKIALVLVHFDHIASYVANANHSIM*
Ga0137384_1159078723300012357Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDH
Ga0137395_1110116313300012917Vadose Zone SoilMQQPAGVVVRPAIRHVPRSVVCDAHERIVRCGLGIVPISSETEDKFEDAMEVTASSPLPEIARVLVRFDHLARFIVNANHGMM*
Ga0137394_1054546813300012922Vadose Zone SoilMQQPAGVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTTSSPLFELARVLVRLDHVVSFIVNAN
Ga0137419_1184544913300012925Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVTSETEDKFEDAMEKTASSPLPEIARVLLRLDHV
Ga0164300_1003791433300012951SoilMQQPADVVVRPATKHVPRSVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASSPLPEIARVLVRLDHVARFIVNANHSVM*
Ga0164301_1023474523300012960SoilKQQPAGVVVRSGIRHVPRSVVCDAHDRIVRCGLGIVPVSSDTEDKFEDAMEVTASSPLPEIARVLVRLDHVARFIVNANHSVM*
Ga0134076_1026124013300012976Grasslands SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVASFIKYPDHIIV*
Ga0164304_1173706013300012986SoilMQQPADVVVRPATKHVPRSVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASSPLPEIARVLVRLDHDARFIVNANHSVM*
Ga0164307_1020446013300012987SoilMQQPADVVVRPATKHVPRSVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASSPLPEIARVLVRLDH
Ga0164305_1004806153300012989SoilMQQPADVGVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASSPLPEIARVLVRLDHVARFIVNANHSVM*
Ga0134075_1032272523300014154Grasslands SoilMQQPAGVVVRPAIRHVPRSVVCDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVARGTHGKCTI*
Ga0134079_1006976423300014166Grasslands SoilMQQPANVVVRPALKDVPRSVVRNAHERIVGCGLGIVPADSETEDKFEDAMEVTASSPLPEIARVLVRF
Ga0137405_103541823300015053Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARLLVRLDHGASFIVNANYSIG*
Ga0137405_114897623300015053Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHGASFIVNANYSIG*
Ga0134073_1000051593300015356Grasslands SoilMQQPANVVVRPALKDVPRSVVRNAHERIVGCGLGIVPADSETEDKFEDAMEVTASSPLPEIARVLVRFDHVACLIVNANHSVM*
Ga0134085_1023510613300015359Grasslands SoilMQQPANVVVRPALKDVPRSVVRNAHERIVGCGLGIVPADSETEDKFEDAMEVTASSPLPEIARVLVRFDHVAR
Ga0184608_1020948023300018028Groundwater SedimentMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVACFIVNANDGIM
Ga0184618_1003230013300018071Groundwater SedimentMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLFEIARVLLRFR
Ga0066655_1058467413300018431Grasslands SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVASFRYRRAALFF
Ga0066667_10012833103300018433Grasslands SoilMQQPTDVVVRPAIKHVPRSVVCDAHERIVRCGLGIVPVSSETEDRFEDAMEVTASSPLPETARVIVRLDHVARCIINADHSVM
Ga0066667_1030998813300018433Grasslands SoilMQQPANVVVRPALKDVPRSVVRNAHERIVGCGLGIVPADSETEDKFEDAMEVTASSPLPEIARVLVRFDHVARLIVNVNHSVM
Ga0066667_1110378523300018433Grasslands SoilRERQMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAIEVTASSPLFEIARVLVRLAHAACLIVHANHSIM
Ga0066669_1050727733300018482Grasslands SoilMQQPAGVVVRPAIRHVPRSVVCDAHERIVRCCGLGIVPVSSETEDKFEDAMEVTASSPLFEIASVLVRPDYVTSVIANATCSTISLTPSDP
Ga0066669_1218767113300018482Grasslands SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVASEQLLLLAPRGFSPPGAD
Ga0173479_1040873523300019362SoilMQQPADVVARPPIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLSEIARVFVHLDHYQKAARFSESCGFYWSLS
Ga0137408_114477043300019789Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVASFIVNANYSIG
Ga0193715_108009813300019878SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARLLVRVDHVASIIVNANHSVM
Ga0193727_100228823300019886SoilMQQPADVVVRPAIKHVPCSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVARLIVNANHSMM
Ga0193727_102295323300019886SoilMQQPAGVVVRPAIKHVPRFVVRDAHERIVRCCGLGIVPVSSETEDKFEDAMEMTASSPLFQIALVFVRVDHVASVIVNANHGVLFGLAKLARFFQTLRI
Ga0193729_101092663300019887SoilMQQPSDVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLFEIARVLLRFR
Ga0193735_113114023300020006SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVASFIVNANDGIM
Ga0224452_105830523300022534Groundwater SedimentPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVASFIVNANDGIM
Ga0222623_1002160913300022694Groundwater SedimentMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVASFIVN
Ga0207646_1050632223300025922Corn, Switchgrass And Miscanthus RhizosphereMQQPAGVVVRPPIRHVPRSVVCDAHERIVRCGLGIVPISSETEDKFEDAMEVTASSPLPEIARVLVRFDHLARFIVNANHGMM
Ga0209470_101049813300026324SoilRPALKDVPRSVVRNAHERIVGCGLGIVPADSETEDKFEDAMEVTASSPLPEIARVLVRFDHVARLIVNVNHSVM
Ga0209470_112932723300026324SoilMQQPADVVVRPAIKHVPRSVARDAHERIVRCGLGIVPVRSETEDKFEDAMEVTASSPLFELSHVLVRFNQVARFIVNANHGIMRAEAVRVHRMVRHFSVPLR
Ga0209801_133121113300026326SoilMQQPTDVVVRPAIKHVPRSVVCDAHERIVRCGLGIVPVSSETEDRFEDAMEVTASSPLPETARVIVR
Ga0209375_102462813300026329SoilNVVVRPALKDVPRSVVRNAHERIVGCGLGIVPADSETEDKFEDAMEVTASSPLPEIARVLVRFDHVARLIVNVNHSVM
Ga0209375_107750233300026329SoilGVVVRPAIRHVPRSVVRNAHERIVHCGLGIVPAGSETEDKFEDAMEVTASSPLPEIARVLVRFGHVASFIVNANDGVV
Ga0209473_100855223300026330SoilVVVRPAIRHVPRSVVRNAHERIVHCGLGIVPAGSETEDKFEDAMEVTASSPLPEIARVLVRFGHVASFIVNANDGVV
Ga0209159_124413113300026343SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVMQIGSASEIGSTPR
Ga0209808_109635523300026523SoilVVVRPAIRHVPRSVVRNGHERIVHCGLGIVPAGSETEDKFEDAMEVTASSPLPEIARVLVRFGHVASFIVNANDGVV
Ga0209157_103537013300026537SoilMQQPAGVVVRPAIRHVPRSVVCDAHERIVRCCGLGIVPVSSETEDKFEDAMEVTASSPLFEIASVLVR
Ga0209156_1015380813300026547SoilMQQPAGVVVRPAIRHVPRSVVCDAHERIVRCCGLGIVPVSSETEDKFEDAMEVTASSPLFEIASVLVRPDHVARFIEHANHGIV
Ga0209648_1004799963300026551Grasslands SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEHKFEDAMEKTASSPLPEIARVLVRLDHVGRLIVTQIGSASEIRLTQR
Ga0209648_1016365423300026551Grasslands SoilVVVHPAIKHVPRSVVHDAHERMVRCRGLVIVGSDTEDKFEDAMEVTASSPLFETALVLVRFDHVARLVVNAMISTRLRSRKRKKERESPRPRSV
Ga0210002_106824413300027617Arabidopsis Thaliana RhizosphereVVVRPAIKHVPRSVVRDAHKRIVRCGLGIVPVSSETEDKFEDAMEVTASSPLPEIASVLLRFNHVASVIVNSNHSAM
Ga0137415_1135648123300028536Vadose Zone SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVTSETEDKFEDAIEVTASSPLFEIARVLLRFR
Ga0257175_101758613300028673SoilVVVRPAIRHVPRSVVCDAHERIVRCCGLGIVPVSSETEDKFEDAMEVTASSPLFEIASVLVRPDYVTSVIANATCSTISLTPSDP
Ga0307299_1016471023300028793SoilMQQPADVVVRPAIKHVPRSVVRDAYERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARLLVRVDHVASIIVNANHSVM
Ga0307302_1001831163300028814SoilMQQPADVVVRPAIKHVPRSVARDAHERIVRCGLGIVPVRSETEDKFEDAMEVTASSPLFELSRVLVRFNHVARFIVNANHGIM
Ga0307278_1000026723300028878SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEKTASSPLPEIARVLVRLDHVARFIVNANHGIM
Ga0307278_1024657813300028878SoilMQQAADVVVRPAIKHVPHSVVRDAHERIFRCGLGIVPVSSETEDKFEDAMEVTASSPLFEIARVLVRLDHVACFIVNANHGIM
Ga0075404_1149435423300030842SoilMQQPASVIVRPAIKHVPRSVARDAHERIVRCGLVIVPVDSETEDKFEDAMEVTASSPLFEIAFVLVRFDHVASLIVNADYCTV
Ga0075399_1120715323300030967SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASLPLFELALVPVRLDHIARARRETRRVRKTI
Ga0170834_11326625613300031057Forest SoilMQQPAGVVVRPAIRHVPRPVVCDAHERIVRCCGLGIVPVSSETEDKFEDAMEVTASSPLFEIAFVLVR
Ga0170824_12443239823300031231Forest SoilMQQLADVVVRPATKHVPRSVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASSPLPEIARVFARFDQVPAISTRLDSF
Ga0170824_12478138013300031231Forest SoilVPRSVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASSPLPEIALVLVRFDHVPRFIVNANHSTL
Ga0170818_10999264523300031474Forest SoilVRPATKHVPRSVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASSPLPEIARVFARFDQVPAISTRLDSF
Ga0170818_11391977623300031474Forest SoilVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLRELASVLVRVDHVASRIVNANHSIM
Ga0310813_1096301423300031716SoilMQQPADVVVRPAIKHVPRSVVRDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLLQIALVFVRLNHGASVIVHADDGST
Ga0307468_10066454323300031740Hardwood Forest SoilVGRPATKHVPRSVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASSPLPEIARVLVRLDHVARFIVNANHSVM
Ga0307478_1155984423300031823Hardwood Forest SoilMQQPAGGVVLRPAIRHVPRSVVCDAHERIVRCCGLGFVPESSETEDKFEDVMEVTASSPLFEVPRKLVRFNHVASIIINANHSMM
Ga0307472_10221651523300032205Hardwood Forest SoilMQQPADVVGRPATKHVPRSVVRDAHERIVRCGLGIVPVSSDTEDKFEDAMEVTASSPLPEIARVLVRLDHVARFIVNANHSVM
Ga0310810_1102456713300033412SoilVVVRPAIKHVSRSVVRDAHERIVRCGLVIVPVSSETEDKFEDAMEVTASSPLFEIASVLVCLDHVASIIVNPDHSAM
Ga0310811_1074631923300033475SoilMRQPADVVLRPAIKHVPRSVVCDAHERIVRCGLGIVPVSSETEDKFEDAMEVTASSPLLQIALVFVRLNHGASVIVHADDGST

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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