Metagenome Family F076012

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076012
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	112 residues
Representative Sequence	MPSLEKATPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTPPDLD
Number of Associated Samples	94
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	17.80 %
% of genes near scaffold ends (potentially truncated)	26.27 %
% of genes from short scaffolds (< 2000 bps)	68.64 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.881 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (23.729 % of family members)
Environment Ontology (ENVO)	Unclassified (59.322 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (52.542 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.65% β-sheet: 0.00% Coil/Unstructured: 54.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF07728	AAA_5	14.41
PF00216	Bac_DNA_binding	3.39
PF01464	SLT	3.39
PF08774	VRR_NUC	1.69
PF01381	HTH_3	0.85
PF00004	AAA	0.85
PF04851	ResIII	0.85
PF04002	RadC	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	3.39
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
All Organisms	root	All Organisms	27.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
cellular organisms	root	All Organisms → cellular organisms	27.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.03 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	11.02 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	11.02 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.08 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	11.02 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.08 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	11.02 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.08 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	2.54 %
Desulfurellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales	0.85 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	11.02 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.08 %
Aphanizomenonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae	2.54 %
unclassified Desulfurellales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales	0.85 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	11.02 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.08 %
Aphanizomenon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon	2.54 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.85 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	11.02 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.08 %
Aphanizomenon flos-aquae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae	2.54 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.85 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	11.02 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.08 %
Aphanizomenon flos-aquae WA102	isolate	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	2.54 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.85 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573028\|GS313G0146KB_1112118746617	Not Available	873	Open in IMG/M
3300002161\|JGI24766J26685_10041311	Not Available	1063	Open in IMG/M
3300002386\|B570J29613_1008194	Not Available	666	Open in IMG/M
3300002835\|B570J40625_100040388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	6963	Open in IMG/M
3300004240\|Ga0007787_10007343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	4271	Open in IMG/M
3300005581\|Ga0049081_10235840	Not Available	646	Open in IMG/M
3300005582\|Ga0049080_10130191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	848	Open in IMG/M
3300005582\|Ga0049080_10226827	Not Available	613	Open in IMG/M
3300005805\|Ga0079957_1044777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	2765	Open in IMG/M
3300005805\|Ga0079957_1102614	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300006641\|Ga0075471_10026142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	3402	Open in IMG/M
3300006802\|Ga0070749_10008603	All Organisms → cellular organisms → Bacteria	6647	Open in IMG/M
3300006920\|Ga0070748_1370267	Not Available	503	Open in IMG/M
3300007212\|Ga0103958_1206752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1463	Open in IMG/M
3300008261\|Ga0114336_1172792	Not Available	934	Open in IMG/M
3300008267\|Ga0114364_1039025	All Organisms → cellular organisms → Archaea	1790	Open in IMG/M
3300008448\|Ga0114876_1027310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	2848	Open in IMG/M
3300009158\|Ga0114977_10037980	Not Available	3006	Open in IMG/M
3300009159\|Ga0114978_10122592	Not Available	1695	Open in IMG/M
3300009159\|Ga0114978_10632349	Not Available	616	Open in IMG/M
3300009164\|Ga0114975_10045681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	2592	Open in IMG/M
3300009183\|Ga0114974_10256690	Not Available	1043	Open in IMG/M
3300009183\|Ga0114974_10290631	Not Available	964	Open in IMG/M
3300010354\|Ga0129333_10579380	Not Available	976	Open in IMG/M
3300010885\|Ga0133913_11320990	All Organisms → cellular organisms → Archaea	1840	Open in IMG/M
3300011268\|Ga0151620_1029936	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	1862	Open in IMG/M
3300013004\|Ga0164293_10014883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	6531	Open in IMG/M
3300013004\|Ga0164293_10540618	Not Available	764	Open in IMG/M
3300013005\|Ga0164292_10007198	Not Available	9068	Open in IMG/M
3300013005\|Ga0164292_10412745	Not Available	899	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10209882	Not Available	1217	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10050443	Not Available	3015	Open in IMG/M
3300013372\|Ga0177922_10953156	Not Available	871	Open in IMG/M
3300014960\|Ga0134316_1000950	Not Available	2998	Open in IMG/M
3300015050\|Ga0181338_1020029	All Organisms → cellular organisms → Archaea	1050	Open in IMG/M
3300015050\|Ga0181338_1024699	Not Available	928	Open in IMG/M
3300015050\|Ga0181338_1043595	Not Available	664	Open in IMG/M
3300015050\|Ga0181338_1055713	Not Available	573	Open in IMG/M
3300017700\|Ga0181339_1020212	Not Available	748	Open in IMG/M
3300017707\|Ga0181363_1035891	Not Available	921	Open in IMG/M
3300017707\|Ga0181363_1070154	Not Available	608	Open in IMG/M
3300017736\|Ga0181365_1054887	Not Available	992	Open in IMG/M
3300017747\|Ga0181352_1157263	Not Available	599	Open in IMG/M
3300017754\|Ga0181344_1036733	Not Available	1487	Open in IMG/M
3300017754\|Ga0181344_1038248	Not Available	1452	Open in IMG/M
3300017754\|Ga0181344_1049670	Not Available	1252	Open in IMG/M
3300017754\|Ga0181344_1109707	Not Available	798	Open in IMG/M
3300017766\|Ga0181343_1006045	Not Available	4122	Open in IMG/M
3300017766\|Ga0181343_1217624	Not Available	520	Open in IMG/M
3300017777\|Ga0181357_1225983	Not Available	658	Open in IMG/M
3300017788\|Ga0169931_10906970	Not Available	555	Open in IMG/M
3300018041\|Ga0181601_10648211	Not Available	537	Open in IMG/M
3300020173\|Ga0181602_10333083	Not Available	617	Open in IMG/M
3300020174\|Ga0181603_10207474	Not Available	806	Open in IMG/M
3300020520\|Ga0208481_1012816	Not Available	1412	Open in IMG/M
3300020524\|Ga0208858_1000958	All Organisms → cellular organisms → Bacteria	5224	Open in IMG/M
3300020532\|Ga0208601_1060285	Not Available	515	Open in IMG/M
3300021600\|Ga0194059_1021413	Not Available	2257	Open in IMG/M
3300021962\|Ga0222713_10141585	Not Available	1671	Open in IMG/M
3300021963\|Ga0222712_10343623	Not Available	922	Open in IMG/M
3300022190\|Ga0181354_1205235	Not Available	585	Open in IMG/M
3300022921\|Ga0255765_1375095	Not Available	532	Open in IMG/M
3300025872\|Ga0208783_10016358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	3706	Open in IMG/M
3300025889\|Ga0208644_1000251	All Organisms → cellular organisms → Bacteria	40691	Open in IMG/M
3300027608\|Ga0208974_1186643	Not Available	508	Open in IMG/M
3300027659\|Ga0208975_1032376	Not Available	1663	Open in IMG/M
(restricted) 3300027728\|Ga0247836_1009997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	9026	Open in IMG/M
3300027733\|Ga0209297_1132323	Not Available	1040	Open in IMG/M
3300027759\|Ga0209296_1362786	Not Available	554	Open in IMG/M
3300027782\|Ga0209500_10168797	Not Available	1013	Open in IMG/M
3300027785\|Ga0209246_10358680	Not Available	553	Open in IMG/M
3300027797\|Ga0209107_10143936	All Organisms → cellular organisms → Bacteria → FCB group	1225	Open in IMG/M
3300027797\|Ga0209107_10276255	Not Available	799	Open in IMG/M
3300027797\|Ga0209107_10488131	Not Available	549	Open in IMG/M
3300027804\|Ga0209358_10020155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	4246	Open in IMG/M
3300027805\|Ga0209229_10000661	Not Available	14016	Open in IMG/M
3300027899\|Ga0209668_10052651	Not Available	2198	Open in IMG/M
3300027899\|Ga0209668_10335010	Not Available	978	Open in IMG/M
3300027899\|Ga0209668_11138462	Not Available	525	Open in IMG/M
3300027900\|Ga0209253_10104339	All Organisms → cellular organisms → Archaea	2320	Open in IMG/M
(restricted) 3300027977\|Ga0247834_1167211	Not Available	868	Open in IMG/M
3300031746\|Ga0315293_10214620	Not Available	1576	Open in IMG/M
3300031746\|Ga0315293_10829435	Not Available	674	Open in IMG/M
3300031758\|Ga0315907_10562149	Not Available	891	Open in IMG/M
3300031772\|Ga0315288_10621025	Not Available	1037	Open in IMG/M
3300031787\|Ga0315900_10371693	Not Available	1143	Open in IMG/M
3300031873\|Ga0315297_11164451	Not Available	633	Open in IMG/M
3300031885\|Ga0315285_10244628	Not Available	1390	Open in IMG/M
3300031951\|Ga0315904_11420617	Not Available	516	Open in IMG/M
3300031963\|Ga0315901_10116763	All Organisms → cellular organisms → Archaea	2437	Open in IMG/M
3300031999\|Ga0315274_11254295	Not Available	728	Open in IMG/M
3300032053\|Ga0315284_10103809	Not Available	3797	Open in IMG/M
3300032116\|Ga0315903_10273875	All Organisms → cellular organisms → Archaea	1443	Open in IMG/M
3300032164\|Ga0315283_12422034	Not Available	510	Open in IMG/M
3300032173\|Ga0315268_10512768	Not Available	1183	Open in IMG/M
3300032397\|Ga0315287_10012778	Not Available	8649	Open in IMG/M
3300033233\|Ga0334722_10017016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	6350	Open in IMG/M
3300033233\|Ga0334722_10378867	Not Available	1024	Open in IMG/M
3300033816\|Ga0334980_0058484	Not Available	1625	Open in IMG/M
3300033816\|Ga0334980_0090229	Not Available	1277	Open in IMG/M
3300033981\|Ga0334982_0006584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	7036	Open in IMG/M
3300033993\|Ga0334994_0201805	Not Available	1075	Open in IMG/M
3300033993\|Ga0334994_0363667	Not Available	711	Open in IMG/M
3300033994\|Ga0334996_0001679	All Organisms → cellular organisms → Bacteria	15077	Open in IMG/M
3300033996\|Ga0334979_0007328	Not Available	7688	Open in IMG/M
3300033996\|Ga0334979_0125253	Not Available	1576	Open in IMG/M
3300034020\|Ga0335002_0006444	Not Available	9022	Open in IMG/M
3300034061\|Ga0334987_0020184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	5997	Open in IMG/M
3300034061\|Ga0334987_0053925	Not Available	3316	Open in IMG/M
3300034062\|Ga0334995_0385238	Not Available	883	Open in IMG/M
3300034092\|Ga0335010_0038742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	3537	Open in IMG/M
3300034095\|Ga0335022_0034847	Not Available	3332	Open in IMG/M
3300034103\|Ga0335030_0014028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	6133	Open in IMG/M
3300034106\|Ga0335036_0068451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	2667	Open in IMG/M
3300034111\|Ga0335063_0025586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3789	Open in IMG/M
3300034121\|Ga0335058_0493518	Not Available	695	Open in IMG/M
3300034279\|Ga0335052_0635045	Not Available	531	Open in IMG/M
3300034280\|Ga0334997_0153264	Not Available	1531	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	88.98%
Marine	Environmental → Aquatic → Marine	11.02%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	50.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	33.05%
Coastal	Environmental → Aquatic → Marine → Coastal	5.08%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.24%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.24%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.69%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	38.98%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	22.88%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	11.02%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.08%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.24%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.24%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.39%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.39%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.54%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.85%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.85%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	23.73%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	16.95%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	11.02%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.47%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.24%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.24%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.24%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.24%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.39%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.39%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.54%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.69%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.69%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.69%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.69%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.69%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.85%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.85%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	0.85%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.85%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573028	Estuarine microbial communities from Columbia River, sample from South Channel ETM site, CMGS313-FOS-0p8-ETM-15m	Environmental	Open in IMG/M
3300002161	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA	Environmental	Open in IMG/M
3300002386	Freshwater microbial communities from Lake Mendota, WI - 16NOV2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007212	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Bottom layer) 7 sequencing projects	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014960	Surface water microbial communities from Bangladesh - BaraHaldiaSW0709	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017700	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.D.D	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020174	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)	Environmental	Open in IMG/M
3300020520	Freshwater microbial communities from Lake Mendota, WI - 02JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020524	Freshwater microbial communities from Lake Mendota, WI - 16NOV2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020532	Freshwater microbial communities from Lake Mendota, WI - 09NOV2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021600	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11m	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027728 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14m	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027977 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12m	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GS313G0146KB_00139700	2189573028	Marine Estuarine	MPTLENRLPNLSNRALTRRAARSQAVVGIARATLPGQMVLRLRRSAETMGELVENPAAPADERIAAAKAMVTLQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT
JGI24766J26685_100413112	3300002161	Freshwater And Sediment	MPTLEKATPDLSPKSLSRREHRTGTVLAVARATLPAQMVLRLRRVAGDLGDIAENPAAPAEERISAAKAMVTVQDQLIDLLGIPRRPAASGGKRPSAPMLDVSPGPIPPDL*
B570J29613_10081941	3300002386	Freshwater	MPSLEKATPDVTPKSLAMREARTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDANAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT*
B570J40625_10004038812	3300002835	Freshwater	MPSLERLTPEVNPKSLSRRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAQDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTAPDLS*
Ga0007787_100073431	3300004240	Freshwater Lake	MEKSYPNMDGKSLSRREGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPAPDRISAAKAMVALQDQLIDLLGIPRRPAASAGRGKSSIPIDISPATLVPPPDLT*
Ga0049081_102358401	3300005581	Freshwater Lentic	MPSLEKATPEVSPKSLSMRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAQDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKPSAPMLDVSPTPPDLS*
Ga0049080_101301913	3300005582	Freshwater Lentic	MPSLEKATPDVTPKSLAMREHRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDANAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT*
Ga0049080_102268271	3300005582	Freshwater Lentic	FRRKCGEVAFFSGESRVCRSLSVMPSLEKATPEVSPKSLSMRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAQDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKPSAPMLDVSPTPPDLS*
Ga0079957_10447775	3300005805	Lake	MPSLDKATPEVTPQSLRARENRTGTVLAVSRATLPAQMVLRLRRMAADLGDLACDGSAPAPDRIAAAKAVVSVQDQLIDLLGIPRRPAAGNGKRPSAPMLDVSPGPSVPPD
Ga0079957_11026143	3300005805	Lake	MVPTLENKLPEANHRTLTRRAARSQAVIGIARATLPGQMVLRLRRSAERMADLVEDVTAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPGPSVPPDLS
Ga0075471_100261422	3300006641	Aqueous	LENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMVLRLRRSAETMGELVENPAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGGKRPTAPILDVSPSAAPPDLG*
Ga0070749_100086033	3300006802	Aqueous	MPSLDKYTPEVSPKSLSRRESRTGTVIAVARATLPAQMVLRLRRVAGDLGDIAQNAAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGKGKASAPILDVSPSAAPPDLG*
Ga0070748_13702671	3300006920	Aqueous	SRRAGRSEVVVSLARATLPGQMVLRLRRTAEDMGEIAQNPEAPAEDRIAAARAMVTLQDQLIDLLGIPRRPAAAGKGKASAPLLDVSPVGPPPDLGA*
Ga0103958_12067521	3300007212	Freshwater Lake	MVPTLENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMVLRLRRSAERMADLIEDVTAPAPDRIAAARAMVTVQDQLIDLLGIPRRPAAAGGKRPAAPTLDVSPAAPLPPPDLPA*
Ga0114336_11727921	3300008261	Freshwater, Plankton	MPYMEKSYPAMDGKSLSKRAARSEVVLSLARASLPGQMVLRLRRSAERMADLVEDTTAPANDRISAAKAMVTLQDQLMDLLAIPRRPAASAGRGKSSIPIDISPATLVESSPSLPDLD*
Ga0114364_10390254	3300008267	Freshwater, Plankton	MPYMEKSYPAMDGKSLSKRAARSEVVLSLARASLPGQMVLRLRRSAERMADLVEDTTAPANDRISAAKAMVTLQDQLMDLLAIPRRPAASAGRGKSSIPIDISPATLVGSSPSLPDLD*
Ga0114876_10273103	3300008448	Freshwater Lake	MPTLENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMVLRLRRSAETMGELVENPAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGGKRPTAPILDVSPAGPPPDLGT*
Ga0114977_100379803	3300009158	Freshwater Lake	MPSLEKATPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKSNAPMLDVSPTAPDLS*
Ga0114978_101225922	3300009159	Freshwater Lake	MPLMEKSYPNMDGKSLSRREGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPANDRISAAKAMVTLQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT*
Ga0114978_106323491	3300009159	Freshwater Lake	MPSLEKSTPEVTPKSLAMRENRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT*
Ga0114975_100456811	3300009164	Freshwater Lake	MPSLEKATPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTAPDLS*
Ga0114974_102566901	3300009183	Freshwater Lake	KSLAMRENRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT*
Ga0114974_102906313	3300009183	Freshwater Lake	MEKSYPNTDGRSLSRREGRSQVVITLARATLPGQMVLRLRRVAEDMSNLAQDPSAPAPDRISAAKAMVTVQDQLLDLLAIPRRPAAAGKGKPNAPMLDVSPTPPDLD*
Ga0129333_105793801	3300010354	Freshwater To Marine Saline Gradient	MPLMEKSYPNMDGKSLSRRAGRSEVVVSLARATLPGQMVLRLRRTAEDMGEIAQNPEAPAEDRIAAARAMVTLQDQLIDLLGIPRRPAAAGKGKASAPLLDVSPVGPPPDLGA*
Ga0133913_113209901	3300010885	Freshwater Lake	MPSLEKATPDVTPKSLAMREHRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT*
Ga0151620_10299361	3300011268	Freshwater	LKSRLRQSLSVMPTLEKVTPEITPKSLSRREHRTGTVLAVARATLPAQMVLRLRRVAGDLGDIAENTTAPAEERISAAKAMVSVQDQLIDLLGMPRRPAAAGKGKSSAPILDVSPAGPIPPDLG*
Ga0164293_100148835	3300013004	Freshwater	MREARTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTPPDLD*
Ga0164293_105406181	3300013004	Freshwater	REGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPANDRISAAKAMVTLQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT*
Ga0164292_1000719818	3300013005	Freshwater	MPSLEKATPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTPPDLD*
Ga0164292_104127452	3300013005	Freshwater	MYGYVMPLMEKSYPNMDGKSLSRREGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPANDRISAAKAMVTLQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT*
(restricted) Ga0172367_102098822	3300013126	Freshwater	MPTLENKLPGADHRSLTRRAARSQAVIGIARATLPGQMVLRLRRSAERMADLVEDTAAPAEDRIAAARAMVTVQEQLIDLLGIPRRPASVSGRRPAAPMLDVSPGVAAAPPDLPDLPA*
(restricted) Ga0172364_100504433	3300013129	Sediment	YVEKSYPALDGKSLSKRAARSGVVLSLARASLPGQMVLRLRRIAADLGDLACDESAPAPDRIAAARAVVSVQEQLIDLLGIPKRPAAGNGRGKSSVPIDISPAAVVHTLPDLPA*
Ga0177922_109531562	3300013372	Freshwater	MPSLEKATPEVTPKSLAMREHRTGTILSVARATLPAQMVLRLRRVASDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPKRPAAAGKGKPSTLMLDVSPPSA*
Ga0134316_10009503	3300014960	Surface Water	MPVLEKSYPAMDGKSLTRRAARSGVVLSLARATLPGQMVLRLRRTASDLGDIAQNPAAPAPDRIAAAKAMVTVQDQLIDLLGIPRRPAAAGKGKPSAPMLDVSPGVAAPPDLPV*
Ga0181338_10200293	3300015050	Freshwater Lake	MPSLEKATPDVTPKSLAMREARTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT*
Ga0181338_10246993	3300015050	Freshwater Lake	MPSLEKATPEVTPKSLSMREARTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVS
Ga0181338_10435951	3300015050	Freshwater Lake	SVMPSLEKSTPEVTPKSLSMREARTGTILSVARATLPAQMVLRLRRMAADLGDLACDGAATTPDRIAAARAVVSVQDQLMDLLAMPKRPASLPGGKRQALLVDVSPGADLPDQDATL*
Ga0181338_10557132	3300015050	Freshwater Lake	MPSLDKFTPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRMASDLGDLACDGAAPAPDRIAAARAVVSVQDQLMDLLSLPKRPAAAGKGKASAPM
Ga0181339_10202121	3300017700	Freshwater Lake	MPSLEKATPDVTPKSLAMREARTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPSPPDLT
Ga0181363_10358913	3300017707	Freshwater Lake	MHCHAMPTLENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMVLRLRRSAETMGELVENPAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGGKRPTAPILDVSPSAAPPDLG
Ga0181363_10701541	3300017707	Freshwater Lake	MPLMEKSYPNMDGKSLSRRAGRSEVVVSLARATLPGQMVLRLRRTAEDMGEIAQNPAAPADERIAAAKAMVTLQDQLIDLLGIPRRPAAAGKGKASAPLLDVSPVGPPPDLGA
Ga0181365_10548872	3300017736	Freshwater Lake	EARTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT
Ga0181352_11572631	3300017747	Freshwater Lake	MPTLENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMVLRLRRSAETMGELVENPAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGGKRPTAPILDVSPSAAPPDLG
Ga0181344_10367331	3300017754	Freshwater Lake	MPTLENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMILRLRRSTERMADIVEDVTSPAPDRISAAKAMVALQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT
Ga0181344_10382481	3300017754	Freshwater Lake	MHCHAMPTLENKLPEVNHRTLTRRAARSQAVIGIARATLPGQMVLRLRRSAERMADLVEDVTAPASDRVSAAKAMVTVQDQLIDLLGIPRRPAASGGKRPSAPMLDVSPGPSVPPDL
Ga0181344_10496702	3300017754	Freshwater Lake	MPLMEKSYPNMVGKSLSRRAGRSEVVVSLARATLPGQMVLRLRRTAEDMGEIAQNPGAPAEERIAAARAMVTLQDQLIDLLGIPRRPAAAGKGKASAPLLDVSPVGPPPDLGA
Ga0181344_11097071	3300017754	Freshwater Lake	TDGRSLSRREGRSQVVITLARATLPGQMVLRLRRVAEDMSNLAQDPHAPAPDRISAAKAMVTVQDQLLDLLGIPRRPAAAGKGKPSAPMLDVSPTPPDLD
Ga0181343_10060451	3300017766	Freshwater Lake	MPLMEKSYPNMDGKSLSRREGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPAPDRISAAKAMVTLQDQLIDLLGIPRRPAASTGRGKASIPIDISPATLVGSSPSLPDLD
Ga0181343_12176242	3300017766	Freshwater Lake	MPTLENRLPNLSNRALTRRAARSQAVIGIARATLPGQMVLRLRRSAETMGELVDNPAAPADERISAAKAMVTLQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT
Ga0181357_12259831	3300017777	Freshwater Lake	MPSLEKATPDVTPKSLAMREARTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT
Ga0169931_109069701	3300017788	Freshwater	SHCVVMPTLENKLPGVDGRSLSRRAARSGVVLSLARASLPGQMVLRLRRMAADLGDLACDESAPAPDRIAAARAVVSVQEQLIDLLGIPKRPAAGNGRGKSSVPIDISPAAVVHTLPDLP
Ga0181601_106482112	3300018041	Salt Marsh	SLSMREARTGTILSVARATLPAQMVLRLRRMAADLGDLACDGAATTPDRIAAARAVVSVQDQLMDLLSLPKRPASTPGGKRQALLVDVSPGSDLPDQDTV
Ga0181602_103330831	3300020173	Salt Marsh	PEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRMAADLGDLACDGAATTPDRIAAARAVVSVQDQLMDLLSLPKRPASTPGGKRQALLVDVSPGSDLPDQDTV
Ga0181603_102074741	3300020174	Salt Marsh	LEKSTPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRMAADLGDLACDGAATTPDRIAAARAVVSVQDQLMDLLSLPKRPASTPGGKRQALLVDVSPGSDLPDQDTV
Ga0208481_10128161	3300020520	Freshwater	RSLSVMPSLEKATPDVTPKSLAMREARTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDANAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT
Ga0208858_10009582	3300020524	Freshwater	MPSLEKATPDVTPKSLAMREARTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDANAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT
Ga0208601_10602851	3300020532	Freshwater	GESRVCRSLSVMPSLERLTPEVNPKSLSRRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAQDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTAPDL
Ga0194059_10214133	3300021600	Anoxic Zone Freshwater	MRQVLRLRYFCFCGEVAFFSGESRVCRSLSVMPSLEKATPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPHAPANDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTAPDLS
Ga0222713_101415851	3300021962	Estuarine Water	DKYTPEVSPKSLSRRESRTGTVIAVARATLPAQMVLRLRRVAGDLGDIAQNPAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGKGKPTAPILDVSPAGPPPDLGT
Ga0222712_103436231	3300021963	Estuarine Water	MPSLDKYTPEVSPKSLSRRESRTGTVIAVARATLPAQMVLRLRRVAGDLGDIAQNPAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGKGKPTAPILDVSPAGPPPDLGT
Ga0181354_12052351	3300022190	Freshwater Lake	MPLMEKSYPNMDGKSLSRREGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPAPDRISAAKAMVALQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT
Ga0255765_13750952	3300022921	Salt Marsh	LSMREARTGTILSVARATLPAQMVLRLRRMAADLGDLACDGAATTPDRIAAARAVVSVQDQLMDLLSLPKRPASTPGGKRQALLVDVSPGSDLPDQDTV
Ga0208783_100163584	3300025872	Aqueous	LENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMVLRLRRSAETMGELVENPAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGGKRPTAPILDVSPSAAPPDLG
Ga0208644_10002516	3300025889	Aqueous	MPSLDKYTPEVSPKSLSRRESRTGTVIAVARATLPAQMVLRLRRVAGDLGDIAQNAAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGKGKASAPILDVSPSAAPPDLG
Ga0208974_11866431	3300027608	Freshwater Lentic	LSVMPSLEKATPDVTPKSLAMREHRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDANAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT
Ga0208975_10323762	3300027659	Freshwater Lentic	MPSLEKATPEVSPKSLSMRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAQDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKPSAPMLDVSPTPPDLS
(restricted) Ga0247836_100999711	3300027728	Freshwater	MPSLEKSTPEVTPQSLRAREARTGTILSVSRATLPAQMVLRLRRMAADLGDLACDGAAPASDRIAAAKAMVTVQDQLIDLLGIPRRPAAAGNGKRPSAPMLDVSPGPSVPPDL
Ga0209297_11323233	3300027733	Freshwater Lake	MPSLEKATPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLLDLLGIPRRPAAAGKGKSNAPMLDVSPTAPDLS
Ga0209296_13627861	3300027759	Freshwater Lake	LAMRENRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT
Ga0209500_101687971	3300027782	Freshwater Lake	EKSYPNMDGKSLSRREGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPANDRISAAKAMVTLQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT
Ga0209246_103586802	3300027785	Freshwater Lake	MPSLEKATPDVTPKSLAMREARTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPD
Ga0209107_101439361	3300027797	Freshwater And Sediment	MEKSYPNTDGRSLSRREGRSQVVITLARATLPGQMVLRLRRVAEDMSNLAQDPHAPAQDRISAAKAMITVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTAPDLS
Ga0209107_102762553	3300027797	Freshwater And Sediment	MPSLEKATPDVTPKSLAMREHRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDANAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT
Ga0209107_104881311	3300027797	Freshwater And Sediment	VRFSEIPRKHWLKSPRCRSLSVMPSLEKSTPEVTPKSLAMREHRTGTILSVARATLPAQMVLRLRRVASDLGDIAQDTAAPADERISAAKAMVSVQDQLLDLLAIPKRPAAAGKGKPSTLMLDVSPTPPDLT
Ga0209358_1002015513	3300027804	Freshwater Lake	MPLMEKSYPNMDGKSLSRREGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPAPDRISAAKAMVALQDQLIDLLGIPRRPAASAGRGKSSIPIDISPATLVPPPDLT
Ga0209229_100006612	3300027805	Freshwater And Sediment	MPTLEKATPDLSPKSLSRREHRTGTVLAVARATLPAQMVLRLRRVAGDLGDIAENPAAPAEERISAAKAMVTVQDQLIDLLGIPRRPAASGGKRPSAPMLDVSPGPIPPDL
Ga0209668_100526514	3300027899	Freshwater Lake Sediment	MPSLDKYTPEVTPKSLSRRESRTGTVIAVARATLPAQMVLRLRRVAGDLGDIAQNAAAPADERISAAKALVTVQDQLIDLLGIPRRPASAAGGKRPTAPILDVSPSAAPPDLG
Ga0209668_103350101	3300027899	Freshwater Lake Sediment	MEKSYPNMDGKSLSRRAGRSEVVVSLARATLPGQMVLRLRRTAEDMGEIAQNPEAPAEDRIAAARAMVTLQDQLIDLLGIPRRPAAAGKGKASAPLLDVSPVGPPPDLGA
Ga0209668_111384621	3300027899	Freshwater Lake Sediment	HWLKSLCCRSLSVMPSLERLTPEVSPKSLSRRENRTGTVLAVARATLPAQMVLRLRRSAVTMSEIAEDQNSPATDRISAAKAMVSLQDQLMDLLAIPRRPAASSGKGKSSIPIDISPATLVGSSPSLPDLD
Ga0209253_101043391	3300027900	Freshwater Lake Sediment	MPLMEKSYPNMDGKSLSRRAGRSEVVVSLARATLPGQMVLRLRRTAEDMGEIAQNPAAPAEERIAAARAMVTLQDQLIDLLGIPRRPAAAGKGKASAPLLDVSPVGPPPDLGA
(restricted) Ga0247834_11672112	3300027977	Freshwater	MPYMEKSYPATDGRSLSRRAGRSEVVLSLARASLPGQMVLRLRRSAERMADLIEDVNAPASDRIAAAKAMVTVQDQLIDLLGIPRRPAAGNGKRPSAPMLDVSPGPSVPPDL
Ga0315293_102146203	3300031746	Sediment	MRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKPSAPMLDVSPTAPDLS
Ga0315293_108294352	3300031746	Sediment	MRENRTGTILSVARATLPAQMVLRLRRMAADLGDLACDGAAPAPDRIAAARAVVSVQDQLMDLLAMPKRPASAPGGKRQPLLVDVSPGSPDLPDQDATL
Ga0315907_105621491	3300031758	Freshwater	MVPTLENKLPEANHRTLTRRAARSQAVIGIARATLPGQMVLRLRRSAERMADLVEDVTAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPGPSVPPDLSA
Ga0315288_106210252	3300031772	Sediment	MPSLEKSTPEVTPKSLSMRENRTGTILSVARATLPAQMVLRLRRMAADLGDLACDGAAPAPDRIAAARAVVSVQDQLMDLLAMPKRPASAPGGKRQPLLVDVSPGADLPDQDAT
Ga0315900_103716933	3300031787	Freshwater	MPTLENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMVLRLRRSAETMGELVENPAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGGKRPTAPILDVSPAGPPPDLG
Ga0315297_111644511	3300031873	Sediment	LTPEVNPKSLSRRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAQDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKQSAPMLDVSPTAPDLS
Ga0315285_102446284	3300031885	Sediment	MPSLEKSTPEVTPKSLAMREHRTGTILSLARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAATGKGKPSTLMLDVSPTPPDLT
Ga0315904_114206171	3300031951	Freshwater	CRKVYGCVMPLMEKSYPNMDGKSLSRRAGRSEVVVSLARATLPGQMVLRLRRTAEDMGEIAQNPGAPAEERIAAARAMVTLQDQLIDLLGIPRRPAAAGKGKASAPLLDVSPVGPPPDLG
Ga0315901_101167637	3300031963	Freshwater	MPLMEKSYPNMDGKSLSRRAGRSEVVVSLARATLPGQMVLRLRRTAEDMGEIAQNPGAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGKGKASAPLLDVSPVGPPPDLGS
Ga0315274_112542952	3300031999	Sediment	MPSLEKSTPEVTPKSLAMRENRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAATGKGKPSTLMLDVSPTPPDLT
Ga0315284_1010380911	3300032053	Sediment	MGLKSPRCRSLSVMPSLEKSTPEVTPKSLSMRENRTGTILSVARATLPAQMVLRLRRMAADLGDLACDGAAPAPDRIAAARAVVSVQDQLMDLLAMPKRPASAPGGKRQPLLVDVSPGSPDLPDQDTV
Ga0315903_102738753	3300032116	Freshwater	MPLMEKSYPNMDGKSLSRRAGRSEVVVSLARATLPGQMVLRLRRTAEDMGEIAQNPGAPAEERIAAARAMVTLQDQLIDLLGIPRRPAAAGKGKASAPLLDVSPVGPPPDLGA
Ga0315283_124220341	3300032164	Sediment	PKSLSRRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTPPDLS
Ga0315268_105127681	3300032173	Sediment	MPSLEKATPEVTPKSLAMREHRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPPPPDLT
Ga0315287_1001277821	3300032397	Sediment	MPSLEKATPDVTPKSLAMREHRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAATGKGKPSTLMLDVSPTPPDLT
Ga0334722_100170162	3300033233	Sediment	MPSLERLTPEVNPKSLSRRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTAPDLS
Ga0334722_103788673	3300033233	Sediment	MPSLEKATPDVTPKSLAMREHRTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDANAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPPPPDLT
Ga0334980_0058484_652_993	3300033816	Freshwater	MPTLENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMILRLRRSTERMADIVEDVTSPANDRISAAKAMVALQDQLIDLLGIPRRPAAAGKGKASAPLLDVSPVGPPPDLGS
Ga0334980_0090229_834_1166	3300033816	Freshwater	MEKSYPNMDGKSLSRRAGRSEVVVSLARSTLPGQMVLRLRRTAEDMGQIAQDPEAPANDRISAAKAMVTLQDQLMDLLAIPRRPAAAGKGKASAPLLDVSPVGPPPDLGA
Ga0334982_0006584_2989_3342	3300033981	Freshwater	MHCHAMPTLENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMVLRLRRSAETMGELVENPAAPAEERISAARAMVTLQDQLIDLLGIPRRPAAAGKGKPSAPILDVSPAGPPPDLG
Ga0334994_0201805_506_838	3300033993	Freshwater	MPSLERLTPEVNPKSLSRRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAQDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTAPDLS
Ga0334994_0363667_119_478	3300033993	Freshwater	MYGYVMPLMEKSYPNMDGKSLSRREGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPANDRISAAKAMVTLQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT
Ga0334996_0001679_8396_8728	3300033994	Freshwater	MEKSYPNMDGKSLSRRAGRSEVVVSLARSTLPGQMVLRLRRTAEDMGQIAQDPEAPANDRISAAKAMVTLQDQLIDLLGIPRRPAAAGKGKASAPLLDVSPVGPPPDLGA
Ga0334979_0007328_5431_5868	3300033996	Freshwater	MNRFMRQVLRLRYFCFCGEVAFFSGESRRCRSLSVMPSLEKATPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTPPDLD
Ga0334979_0125253_1156_1479	3300033996	Freshwater	MEKSYPNTDGRSLSRREGRSQVVITLARATLPGQMVLRLRRVAEDMSNLAQDPHAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTPPDLS
Ga0335002_0006444_2229_2552	3300034020	Freshwater	MEKSYPNTDGRSLSRREGRSQVVITLARATLPGQMVLRLRRVAEDMSNLAQDPHAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTAPDLS
Ga0334987_0020184_598_948	3300034061	Freshwater	MVPTLENKLPEANHRTLTRRAARSQAVIGIARATLPGQMVLRLRRSAERMADLVEDVTAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGNGKRPAAPMLDVSPGPSVPPDLSA
Ga0334987_0053925_1984_2328	3300034061	Freshwater	MPLMEKSYPNMDGKSLSRREGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPANDRISAAKAMVTLQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT
Ga0334995_0385238_376_708	3300034062	Freshwater	MPSLEKATPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAPDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKPSAPMLDVSPTAPDLS
Ga0335010_0038742_3055_3387	3300034092	Freshwater	MPSLERLTPEVNPKSLSRRENRTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPAAPANDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKPTAPMLDVSPTPPDLD
Ga0335022_0034847_516_848	3300034095	Freshwater	MPSLEKATPEVSPKSLSMREARTGTILSVARATLPAQMVLRLRRVAGDLGDLAQDPSAPAQDRISAAKAMVTVQDQLIDLLGIPRRPAAAGKGKASAPMLDVSPTPPDLS
Ga0335030_0014028_120_464	3300034103	Freshwater	MPTLENRLPNLSNRALTRRAARSQAVIGIARATLPGQMVLRLRRSAETMGELVDNPTAPADERISAAKAMVALQDQLIDLLGIPRRPAASAGRGKSSIPIDISPATLVPPPDLT
Ga0335036_0068451_86_430	3300034106	Freshwater	MPTLEKVTPEITPKSLSRREHRTGTVLAVARATLPAQMVLRLRRVAGDLGDIAENAAAPAEERISAAKAMVSVQDQLIDLLGIPRRPASASGKGKSSAPILDVSPAGPIPPDLG
Ga0335063_0025586_106_462	3300034111	Freshwater	MHCHAMPTLENKLPEVNHRTLTRRAARSQAVVGIARATLPGQMVLRLRRSAETMGELVENPAAPAEERIAAARAMVTLQDQLIDLLGIPRRPASAAGGKRPSAPILDVSPAGPPPDLG
Ga0335058_0493518_309_641	3300034121	Freshwater	MPSLEKATPEVTPKSLAMREARTGTILSVARATLPAQMVLRLRRVAGDLSDIAQDTNAPAPDRISAAKAMVSVQDQLLDLLAIPRRPAAAGKGKPSTLMLDVSPTPPDLT
Ga0335052_0635045_207_530	3300034279	Freshwater	MPSLDKATPEVTPQSLRARENRTGTVLAVSRATLPAQMVLRLRRMAADLGDIAENPAAPADERISAAKAVVSVQDQLIDLLGIPRRPAAAGKGKPSAPILDVSPAGPP
Ga0334997_0153264_119_478	3300034280	Freshwater	VYGYVMPLMEKSYPNMDGKSLSRREGRSEVVVSLARATLPGQMVLRLRRTAEDMGQIAQDPEAPANDRISAAKAMVTLQDQLIDLLGIPRRPAASTGRGKSSIPIDISPATLVPPPDLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters