Metagenome / Metatranscriptome Family F076027

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076027
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	114 residues
Representative Sequence	MNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLRRERREFAPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITKQQRQFHTQLARLDVGLHKLMLNTDGMGYLLTEAN
Number of Associated Samples	79
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.36 %
% of genes near scaffold ends (potentially truncated)	27.12 %
% of genes from short scaffolds (< 2000 bps)	69.49 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.831 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (22.881 % of family members)
Environment Ontology (ENVO)	Unclassified (55.932 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.746 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.36% β-sheet: 0.00% Coil/Unstructured: 32.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF08281	Sigma70_r4_2	38.14
PF00437	T2SSE	22.88
PF00482	T2SSF	4.24
PF00578	AhpC-TSA	3.39
PF13482	RNase_H_2	2.54
PF13580	SIS_2	1.69
PF14659	Phage_int_SAM_3	0.85
PF05170	AsmA	0.85
PF00294	PfkB	0.85
PF01343	Peptidase_S49	0.85
PF01081	Aldolase	0.85
PF01894	UPF0047	0.85
PF00475	IGPD	0.85
PF11762	Arabinose_Iso_C	0.85
PF13407	Peripla_BP_4	0.85
PF00480	ROK	0.85
PF03144	GTP_EFTU_D2	0.85
PF10825	DUF2752	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.69
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.69
COG0131	Imidazoleglycerol phosphate dehydratase HisB	Amino acid transport and metabolism [E]	0.85
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.85
COG0800	2-keto-3-deoxy-6-phosphogluconate aldolase	Carbohydrate transport and metabolism [G]	0.85
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.68 %
Unclassified	root	N/A	9.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.68 %
Unclassified	root	N/A	9.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.83 %
Unclassified	root	N/A	9.32 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.85 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	79.66 %
Unclassified	root	N/A	9.32 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	79.66 %
Unclassified	root	N/A	9.32 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	40.68 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	16.10 %
Unclassified	root	N/A	9.32 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	40.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.10 %
Unclassified	root	N/A	9.32 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	35.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.10 %
Unclassified	root	N/A	9.32 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	32.20 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.10 %
Unclassified	root	N/A	9.32 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.85 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.85 %

Name	Rank	Taxonomy	Distribution
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	32.20 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.10 %
Unclassified	root	N/A	9.32 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.85 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_105418728	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	794	Open in IMG/M
3300004152\|Ga0062386_101571785	Not Available	548	Open in IMG/M
3300004806\|Ga0007854_10145921	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300005439\|Ga0070711_100001668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12290	Open in IMG/M
3300006104\|Ga0007882_10057002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1573	Open in IMG/M
3300006638\|Ga0075522_10000296	All Organisms → cellular organisms → Bacteria	35036	Open in IMG/M
3300009651\|Ga0105859_1190505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300010341\|Ga0074045_10257355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1153	Open in IMG/M
3300010341\|Ga0074045_10746764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300010343\|Ga0074044_10233589	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300010379\|Ga0136449_104478220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	514	Open in IMG/M
3300014159\|Ga0181530_10179947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1180	Open in IMG/M
3300014159\|Ga0181530_10379919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	723	Open in IMG/M
3300014160\|Ga0181517_10001434	All Organisms → cellular organisms → Bacteria	26523	Open in IMG/M
3300014160\|Ga0181517_10016105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5399	Open in IMG/M
3300014160\|Ga0181517_10125480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1466	Open in IMG/M
3300014161\|Ga0181529_10022258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5174	Open in IMG/M
3300014161\|Ga0181529_10029472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4261	Open in IMG/M
3300014161\|Ga0181529_10213609	Not Available	1123	Open in IMG/M
3300014161\|Ga0181529_10631274	Not Available	557	Open in IMG/M
3300014162\|Ga0181538_10274996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	921	Open in IMG/M
3300014165\|Ga0181523_10237590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1044	Open in IMG/M
3300014167\|Ga0181528_10001522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	14402	Open in IMG/M
3300014168\|Ga0181534_10186588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1077	Open in IMG/M
3300014199\|Ga0181535_10109007	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1775	Open in IMG/M
3300014200\|Ga0181526_10033833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3294	Open in IMG/M
3300014200\|Ga0181526_10048728	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2707	Open in IMG/M
3300014201\|Ga0181537_10162044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1535	Open in IMG/M
3300014201\|Ga0181537_10230601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1272	Open in IMG/M
3300014491\|Ga0182014_10216462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1025	Open in IMG/M
3300014493\|Ga0182016_10004756	All Organisms → cellular organisms → Bacteria	14897	Open in IMG/M
3300014494\|Ga0182017_10301774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1003	Open in IMG/M
3300014494\|Ga0182017_10478706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	765	Open in IMG/M
3300014496\|Ga0182011_10142471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1656	Open in IMG/M
3300014496\|Ga0182011_10329668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1008	Open in IMG/M
3300014496\|Ga0182011_10555524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	734	Open in IMG/M
3300014498\|Ga0182019_10159507	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1435	Open in IMG/M
3300014498\|Ga0182019_10240462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1187	Open in IMG/M
3300014498\|Ga0182019_10714671	Not Available	711	Open in IMG/M
3300014498\|Ga0182019_10833780	Not Available	661	Open in IMG/M
3300014499\|Ga0182012_10114056	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300014502\|Ga0182021_10941678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1039	Open in IMG/M
3300014655\|Ga0181516_10458194	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	653	Open in IMG/M
3300014655\|Ga0181516_10572964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	581	Open in IMG/M
3300014838\|Ga0182030_10008768	All Organisms → cellular organisms → Bacteria	20855	Open in IMG/M
3300014838\|Ga0182030_10129670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3309	Open in IMG/M
3300014839\|Ga0182027_10418404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1484	Open in IMG/M
3300016701\|Ga0181509_1174724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	934	Open in IMG/M
3300016705\|Ga0181507_1067039	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	790	Open in IMG/M
3300017988\|Ga0181520_10000986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	60185	Open in IMG/M
3300017988\|Ga0181520_10005636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	19791	Open in IMG/M
3300017988\|Ga0181520_10005707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	19633	Open in IMG/M
3300017988\|Ga0181520_10038947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4763	Open in IMG/M
3300017988\|Ga0181520_10053384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3817	Open in IMG/M
3300017988\|Ga0181520_10592337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	771	Open in IMG/M
3300017988\|Ga0181520_10774096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300017998\|Ga0187870_1046407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1887	Open in IMG/M
3300018024\|Ga0187881_10304106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300018046\|Ga0187851_10658575	Not Available	591	Open in IMG/M
3300021861\|Ga0213853_11135892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	918	Open in IMG/M
3300022524\|Ga0224534_1001462	All Organisms → cellular organisms → Bacteria	12419	Open in IMG/M
3300022863\|Ga0224532_1048333	Not Available	564	Open in IMG/M
3300023088\|Ga0224555_1011603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5303	Open in IMG/M
3300023090\|Ga0224558_1141495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	783	Open in IMG/M
3300025862\|Ga0209483_1000137	All Organisms → cellular organisms → Bacteria	69893	Open in IMG/M
3300025916\|Ga0207663_10001385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	11252	Open in IMG/M
3300026456\|Ga0255351_1075429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300028556\|Ga0265337_1003245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	7109	Open in IMG/M
3300028556\|Ga0265337_1015725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2467	Open in IMG/M
3300028558\|Ga0265326_10027644	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300028563\|Ga0265319_1194287	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	623	Open in IMG/M
3300028573\|Ga0265334_10003854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	6767	Open in IMG/M
3300028573\|Ga0265334_10265691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	589	Open in IMG/M
3300028577\|Ga0265318_10014790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3267	Open in IMG/M
3300028653\|Ga0265323_10065940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1248	Open in IMG/M
3300028653\|Ga0265323_10096063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	985	Open in IMG/M
3300028666\|Ga0265336_10037426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1491	Open in IMG/M
3300028800\|Ga0265338_10026052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5912	Open in IMG/M
3300028800\|Ga0265338_10048422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3866	Open in IMG/M
3300029911\|Ga0311361_10171452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2767	Open in IMG/M
3300029913\|Ga0311362_10289785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1723	Open in IMG/M
3300029913\|Ga0311362_11231939	Not Available	553	Open in IMG/M
3300029914\|Ga0311359_10767090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	681	Open in IMG/M
3300029914\|Ga0311359_11103389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300029915\|Ga0311358_10538834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	898	Open in IMG/M
3300029922\|Ga0311363_10042539	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	7253	Open in IMG/M
3300029922\|Ga0311363_11395120	Not Available	571	Open in IMG/M
3300029939\|Ga0311328_10997700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	546	Open in IMG/M
3300029954\|Ga0311331_11535395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	542	Open in IMG/M
3300029957\|Ga0265324_10036142	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1718	Open in IMG/M
3300029957\|Ga0265324_10231999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300030002\|Ga0311350_11419698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300030688\|Ga0311345_10781762	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300030943\|Ga0311366_10788364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	825	Open in IMG/M
3300031235\|Ga0265330_10182914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	888	Open in IMG/M
3300031235\|Ga0265330_10354703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	619	Open in IMG/M
3300031240\|Ga0265320_10428842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	584	Open in IMG/M
3300031247\|Ga0265340_10010750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4890	Open in IMG/M
3300031247\|Ga0265340_10107349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1293	Open in IMG/M
3300031344\|Ga0265316_10100861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2194	Open in IMG/M
3300031344\|Ga0265316_10118975	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300031344\|Ga0265316_10540903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	830	Open in IMG/M
3300031524\|Ga0302320_10006896	All Organisms → cellular organisms → Bacteria	25101	Open in IMG/M
3300031524\|Ga0302320_10219111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2683	Open in IMG/M
3300031524\|Ga0302320_10371573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1828	Open in IMG/M
3300031711\|Ga0265314_10567016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300031726\|Ga0302321_100438552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1430	Open in IMG/M
3300031726\|Ga0302321_101052210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	928	Open in IMG/M
3300031902\|Ga0302322_103538317	Not Available	535	Open in IMG/M
3300031910\|Ga0306923_11422383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	729	Open in IMG/M
3300032261\|Ga0306920_102993902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	638	Open in IMG/M
3300032770\|Ga0335085_11465183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	713	Open in IMG/M
3300032770\|Ga0335085_11824573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	622	Open in IMG/M
3300032805\|Ga0335078_10336853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2010	Open in IMG/M
3300033433\|Ga0326726_10193613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1874	Open in IMG/M
3300033982\|Ga0371487_0031398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3379	Open in IMG/M
3300034195\|Ga0370501_0228229	Not Available	661	Open in IMG/M
3300034282\|Ga0370492_0055171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1630	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.51%
Host-Associated	Host-Associated	19.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.15%
Aquatic	Environmental → Aquatic	31.36%
Plants	Host-Associated → Plants	19.49%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	30.51%
Soil	Environmental → Terrestrial → Soil	27.12%
Peat	Environmental → Terrestrial → Peat	22.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.49%
Marine	Environmental → Aquatic → Marine	0.85%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	22.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	19.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.24%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.69%
Loam	Environmental → Terrestrial → Soil → Loam	1.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	27.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	22.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	19.49%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	14.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.78%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	22.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	19.49%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	10.17%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	9.32%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.24%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.24%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.54%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.54%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.69%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.69%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.85%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300006104	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022863	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 1-5	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1054187282	3300001213	Wetland	YWNDFPSRVRVQLPRERREFATQRTWRPRLAWAGGFALAVALVFVCVQFHPAQTLSLAVEKQQQQFHARLARLDAGLHRLMLNTDGMGDLLTEAN*
Ga0062386_1015717851	3300004152	Bog Forest Soil	MNDFDLESKLKRVRVPERPDKYWNDFPSRVRVQLRQARIESAPRRQWRPRLAWAGGFALSLALAFVCIEYHPLRAASAAITQNERHFHGQLARLDAGLHKLILNTDGMGYLLTEAN*
Ga0007854_101459211	3300004806	Freshwater	YWNDFPSQVRMQLPRPRKELSPRPAVGWRFAFAGGFALALVLVCIQFHPLQTVSLAFAKQERHFHLQLARLDTGLHRLMLNTDGMGYLLAEAN*
Ga0070711_10000166813	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNDFELESKLRSVRVPERPEEYWNDFPSRVRVQLPRERREFAPRNAWRPRLAWAGGLALAVALVIFCIQFHPLQTVSLAITKQQRQFHAQLARLDIGLHKLMLNTDGMGYLLTEAD*
Ga0007882_100570022	3300006104	Freshwater	MNDFDLESKLKSLRVPGRTEAYWNDFPSQVRMQLPRPRKELSPRPAVGWRFAFAGGFALALVLVCIQFHPLQTVSLAFAKQERHFHLQLARLDTGLHRLMLNTDGMGYLLAEAN*
Ga0075522_1000029636	3300006638	Arctic Peat Soil	MNDFDLDSKLKSVPLPERPDEYWHEFPSGVRVQLRRERPESAPRRAWRPRLAWAGGFALAVALVLVCVQYHPFQTMALAITKQQRHFHAQLARLDAGLHVLMLNTDGMGYLLTEAN*
Ga0105859_11905052	3300009651	Permafrost Soil	FELESKLKSVRVPERPEEYWNDFPSRVRVQLPRARREFAPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTE*
Ga0074045_102573552	3300010341	Bog Forest Soil	MNDFELESKLKNVRVPERPDEYWTDFPSRVRVQLRRERREFAPQSAWRPRLAWAGGLAMAVALVFVCVQFHPLQAASLAITKQQRHFQAQLAQLDAGLHVLMLNTDGMGYLLTEAN*
Ga0074045_107467642	3300010341	Bog Forest Soil	MNDFELESKLKSLRVPDRPDEYWEDFPSRVRVQLRRERREFTAWRPRLAWASGFALTMALVLVCVQFRPFQTVSLAITKQQRHFHAQLAQLDNGLHKLMLNTDGMGYLLAEAN*
Ga0074044_102335892	3300010343	Bog Forest Soil	MNDFELESKLKSVRMPEHPDEYWNDFPSRVRVQLRRGRPEFAPRHAWRPRLAWAGGFALAVALVFVCVQFHPLETVSLAVTKQQRHFHAQLVRLDAGLHVLMLNTDGMGYLLTEAN*
Ga0136449_1044782202	3300010379	Peatlands Soil	MNDRDLEAKLKSVRVPELPDEYWDDFPSRVRVQLGRERQEFRPRPAWRPGLAWAGGLALAVATLVFCLDLHVIQAVSVAIDRHEGRLHAQLARLDAGLH
Ga0181530_101799472	3300014159	Bog	MNDFELETKLKKVRVPERPDEYWDDFPSRVRVQLPRERREFAPQSAGRPRLAWACGLALAFALVFVCVEFHPFQTVSLAITKQQRQFHAQLARLDAGLHVLMLNTDGMGYLLTEAN*
Ga0181530_103799192	3300014159	Bog	MRAPQAMNDFELESKLKSVRVPERPDEYWDDFPSRVRMQLPRERREFMPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITKQQRQFHMQLARLDVGLHKLMLNTDGMGYLLTEAN*
Ga0181517_1000143416	3300014160	Bog	MNDFELESKLKSVRVPERPEEYWNDFPARVRMQLPRERREFTPQYAGRPRLAWACSLALAVALVFVCVQLHPLQTASLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTEAN*
Ga0181517_100161052	3300014160	Bog	MERKLITKKMNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLRGERQEFVPQNVWRPRLAWAGGFALAVALVFACVQFHPLQTVSLAITKQQRQFHTQLAKLDVGLHKLMLNTDGMGYLLTEAN*
Ga0181517_101254802	3300014160	Bog	MNDFELESKLKSVRVPERPDEYWNDFPSRVRVQLHREHREFAPQNAWRPHLAWAGGFALAVALVFVCVQFHPLQTMSLAITKQQRHSHAQLARLDAGLHALMLNTDGMGYLLTEAN*
Ga0181529_100222584	3300014161	Bog	MERKLITKKMNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLRGERQEFVPQNVWRPRLAWAGGFALAVALMFACVRFHPLQTVSLAITKQQRQFHTQLARLDVGLHKLMLNTDGMGYLLTEAN*
Ga0181529_100294725	3300014161	Bog	MNNAELESKLKCVPVPERPEEYWAEFPSRVRVQLRRERPEFVPRPTWHIRPAWAGSFALAMTLVLVCLQYHPLQAASATVTRHERHLSAQLARLDTGLHRLILNTDGMGYLLGEAN*
Ga0181529_102136093	3300014161	Bog	FELESKLKSVRVPERAKEYWNDFPSSVRMQLPRERREFTPQNAGRPHLAWAGGLALAVALVLACVQFHPLQTASLAITKQQRQLHAQLARLDTGLHKLMLNTDGMGYLLTEAN*
Ga0181529_106312742	3300014161	Bog	FELESKLKSVRVPERAKEYWNDFPSSVRMQLPRERREFTPQYAGRPRLAWACSLALAVALVFVCVQFHPLQTASLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTEAN*
Ga0181538_102749962	3300014162	Bog	MNDFELESKLKSVRVPERPDEYWDDFPSRVRMQLPRERREFMPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITKQQRQFHMQLARLDVGLHKLMLNTDGMGYLLTEAN*
Ga0181523_102375902	3300014165	Bog	DFELESKLKSVRVPERPDEYWDDFPSRVRMQLPRERREFMPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITKQQRQFHMQLARLDVGLHKLMLNTDGMGYLLTEAN*
Ga0181528_100015229	3300014167	Bog	MNDFELDGKLKSVAPPKRSDDYWENFPSQVRVQLHHLRPAAPSHPSGGWQFAWASCAALALILVCAEFHPLQTVSLAITKQDRHFHMELARLDSGLHKLMLNTDGMGYLLTEAN*
Ga0181534_101865881	3300014168	Bog	MNDFELESKLKSLRVPERPEEYWNDFPSRVRVQLPRERREFAPRSAWRSRLAWAGGLALAVALVFVCIQFHPLRTVSLAITKQQHQFHAQLARLDAG
Ga0181535_101090073	3300014199	Bog	MNDFELESKLKSVRVPERAKEYWNDFPSSVRMQLPRERREFTPQNAGRPHLAWAGGLALAVALVLACVQFHPLQTASLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTEAN*
Ga0181526_100338332	3300014200	Bog	MERKLITKKMNDFELESKLKSVRVPERPDEYWNDFPSRVRVQLRGERQEFVPQNVWRPRLAWAGGFALAVALEFACVQFHPLQTVSLAITKQQRQFHTQLAKLDVGLHKLMLNTDGMGYLLTEAN*
Ga0181526_100487282	3300014200	Bog	MNDFELESKLKSVRVPERPDEYWDDFPSRVRMQLPRERREFAPRSAWRPRLALAGGFALAVALVFVCVQFHPFQTASLAITKQQRQFHAQLARLDIGLHKLMLNTDGMGYLLTEAN*
Ga0181537_101620442	3300014201	Bog	REKEIETVADGQWKTTMNDFDLESKLKSVPVPARTEDYWENFPSQVRASLHHAPVEFAPRNFWLPRPVWSGGFALALALVFVCVQFHPLQTMSLAITKQQRHFHTQLARLDAGLHVLMLNTGGMGYLLADAN*
Ga0181537_102306013	3300014201	Bog	MKDFNLDAKMKSLCVPERTEEYWIDFPAQVRVQLHHSRPELSPRPFGGLRFACAGCFALALILVCFEFHPLRIVSLAITKQEHHFHMQLARLDTGLHKLMLNTDGMGYLLAEAN*
Ga0182014_102164622	3300014491	Bog	MNDFELESKLKSVPLPERPDEYWNDFPSRVRVQLPRERREFAPQSAGRPRLAWAVGLVLAVVLVFGCIRFHPLQTMSLAITKQQQHFHARLARLDAGLHVLMLNTDGMGYLLTEAN*
Ga0182016_100047566	3300014493	Bog	MNDFGLESKLKSLRVPERTQEYWNDFPSQVRVQLRRSRPEFSPRSFSSLRFACGGGFALALVMVCFQFHPLQTVSLAIAKQERHFHTQLARLDTGLHKLMLNTDGMGYLLTEAN*
Ga0182017_103017742	3300014494	Fen	MKDFELESKLKSVRVPERPDEYWNDFPARVRVQLRRERREFAPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTASLAITKQQRQFHAQLARLDTGLHVLMLNTHGMGYLLTEAN*
Ga0182017_104787062	3300014494	Fen	MNDFELESKLKSLRVPERPEEYWNDFPSRVRVQLPRERREFAPQSAWHPRLAWAGGFALAVALVLVCIQYHPFQAMSLAITKQQHQFHAQLARLDTGLHKLMLNTDGMGYLLTE*
Ga0182011_101424713	3300014496	Fen	MKDFELESKLKSVPVPERPDEYWNDFPARVRVQLRRERREFAPQSAWRPRLAWAAGFALAVALVFVCVQFHPLQTASLAITKQQRQFHAQLARLDTGLHVLMLNTHGMGYLLTEAN*
Ga0182011_103296682	3300014496	Fen	MNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLPRERREFAPQSAWHPRLAWAGGFALAVALVLVCVQYHPFQAMSLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTE*
Ga0182011_105555242	3300014496	Fen	MNDFELESKLKSACVPERPEEYWSDFPSRVRVQLPRERWKFAPQGAGHPRLAWAGGLALAVVLVFACVQFHPFQTTSFAITKQQRQFHAQLARLDAGLHALMLNTHGMGYLLTEQN*
Ga0182019_101595072	3300014498	Fen	MNDFELESKLKSVRVPERPEEYWNDFPSRVRMQLPRERREFAPQSAWRPRLAWAGGFALAMVMVFACIQFHPLQTASLAIARQQQHFHAHLARLNAGLHVLMLNTNGMGYLLAEAN*
Ga0182019_102404622	3300014498	Fen	MKDFELESKLKSVRVPERPDEYWNDFPARVRVQLRRERREFAPQSAWRPRLAWAAGFALAVALVFVCLEFHPLQTTTTAIAWHEQHLRAHLAQLETGLHRLMLNTDGMGYLLAEAN*
Ga0182019_107146712	3300014498	Fen	MNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLRREHPEFTPHCAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITTQQRHFHAQLARLDAGLHKLMLNTDGMGYLLTEAD*
Ga0182019_108337802	3300014498	Fen	MNDFDLESKLKSIRVSERPDEYWNDFPSRIRVQLPHERRELAPQSGWHPRLAWAGGFALAVALVLGCIQFHPLQIMSLAIAKQERHVHLQLARLDTGLHKLMLNTDGMGYLLAEAD*
Ga0182012_101140563	3300014499	Bog	MNDFDLESKLKSVPVPARTEDYWENFPSQVRASLHHAPVEFAPRNFWLPRPVWSGGFALALALVFVCVQFHPLQTMSLAITKQQRHFHTQLARLDAGLHVLMLNTGGMGYLLADAN*
Ga0182021_109416782	3300014502	Fen	ETLAVCIGRARHSVRAAAETKAARRGLRAPPNDMNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLRREHPEFTPHCAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITTQQRHFHAQLARLDAGLHKLMLNTDGMGYLLTEAD*
Ga0181516_104581942	3300014655	Bog	MNGFELESKLKSIRVPERPEEYWDDFPSRVRVQLRRERREVAPRSAGRPRLAWAGGFALAVALMFSCVQLHPLRTMSLAITKQQRQFHAQLARLDAGLHVLILNTDGMGYLLTEAN*
Ga0181516_105729641	3300014655	Bog	MNDFDLESKLKSVRVPERSDEYWDDFPARVRMQLGRERGVFTPRPAWRPRLAWAGGLALTVAVLSVCLDFHLVKAVSVAIDRHEGRLHAQLARLDAGLHKLVLNTDGMGYLLSEPN*
Ga0182030_100087684	3300014838	Bog	MNDFDLESKLKSLRVPERTEAYWNDFTTQVRVQLHRSRPELPTRSSGGLRFAFAGCFALALILVCFQFHPLQTVSLTIAKQERHFHMQLARLDSGLHKLMLNTDGMGYLLAEAN*
Ga0182030_101296703	3300014838	Bog	MKDFNLDAKLKSLCVPERTEEYWNDFPAQVRVQLHHSRPELSPRPFGGLRFACAGCFALALILVCFEFHPLQIVSLAITKQEHHFHMQLARLDTGLHKLMLNTDGMGYLLAEAN*
Ga0182027_104184042	3300014839	Fen	MNDFKLESKLKSVRVPERPDEYWNDFPSRVRVQLRRERPEFTPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTASLAITKQQRHFQAQLARLDAGLHMLMLNTDGMGYLLTEPN*
Ga0181509_11747242	3300016701	Peatland	MNDFELESKLKSVRVPERAKEYWNDFPSSVRMQLPRERREFTPQNAGRPHLAWAGGLALAVALVLACVQFHPLQTASLAITKQQRQLHAQLARLDTGLHKLMLNTDGMGYLLTEAN
Ga0181507_10670392	3300016705	Peatland	DEYWDDFPSRVRMQLPRERREFMPQSAWRPRLAWAGGFALAVALVFACVQFHPLQTVSLAITKQQRQFHMQLARLDVGLHKLMLNTDGMGYLLTEAN
Ga0181520_1000098630	3300017988	Bog	MNDFDLESKLKGVCVPERPEEYWNDFPSRIRVQLRREQPQMAPRPAWRTRLMWASNFALTTAVLFICIQYHPLRSTTTAIIKQERCFHAQLARLDGGLHRLMLNTDGMGYLLMDAN
Ga0181520_1000563620	3300017988	Bog	MNDFELESKLKSVRVPERPDEYWNDFPSRVRVQLHREHREFAPQNAWRPHLAWAGGFALAVALVFVCVQFHPLQTMSLAITKQQRHSHAQLARLDAGLHALMLNTDGMGYLLTEAN
Ga0181520_1000570715	3300017988	Bog	MERKLITKKMNDFELESKLKSVRVPERPDEYWNDFPSRVRVQLRGERQEFVPQNVWRPRLAWAGGFALAVALVFACVQFHPLQTVSLAITKQQRQFHTQLAKLDVGLHKLMLNTDGMGYLLTEAN
Ga0181520_100389475	3300017988	Bog	MNNAELESKLKCVPVPERPEEYWAEFPSRVRVQLRRERPEFVPRPTWHIRPAWAGSFALAMTLVLVCLQYHPLQAASATVTRHERHLSAQLARLDTGLHRLILNTDGMGYLLGEAN
Ga0181520_100533846	3300017988	Bog	MNDFELESKLKSVRVPERPEEYWNDFPARVRMQLPRERREFTPQYAGRPRLAWACSLALAVALVFVCVQLHPLQTASLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTE
Ga0181520_105923371	3300017988	Bog	KSVRVPERPEEYWNDFPARVRMQLPRERREFTPQSAGRPWFAWTGGFALAVVLVFVCVQFHPLQTASLAITKQQRQFHVRLARLDAGLHKLMLNTGGMGYLLTEAN
Ga0181520_107740961	3300017988	Bog	MNDFELESKLKSVRVPERAKEYWNDFPSSVRMQLPRERREFTPQNAGRPHLAWAGGLALAVALVLACVQFHPLQTASLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTEAN
Ga0187870_10464073	3300017998	Peatland	MNDIELESKLKSVRVPERPDEYWNDFPSRVRVQLRRERPEFAPRSAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITTQQRHFHAQLARLDAGLHKLMLITDGMGYLLTEAD
Ga0187881_103041061	3300018024	Peatland	HAARITRRSTTARQKMRAPPAMNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLPRERREFAPQSAWRPRLAWAGGLALAMALVFVCIQFHPLQTMSLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTE
Ga0187851_106585751	3300018046	Peatland	MNDFELESKLKSVRVPERPDEYWDDFPSRVRMQLPRERREFMPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITKQQRQFHMQLARLDVGLHKLMLNTDGMGYLLTEAN
Ga0213853_111358922	3300021861	Watersheds	MNDFELESKLRSVPMPERPDEYWEDFPARVRVQLHRERRDGVPRRAVRPQLAWAGGIALATILAFAWIQFDPLQTISLAFAKQQRHFQAQLSRLDAGLHRLMLNTDGMGYLLAEAN
Ga0224534_10014622	3300022524	Soil	MNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLPRERREFVPQNAWRPRLAWAGGFALAVALLFVCIELHPFQTVSLAITKQQRHFHTQLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0224532_10483331	3300022863	Soil	MNDLDLELKLKSVRVPDRPDEYWENFPSRIRVQLRRDRLEFAPQSAWRPRLAWAGGFAMAVVLAFVCVQFHPLQTVSLAIVKQQRHFHAQLARLDTGLHKLMLNTDGMGYLLAEAN
Ga0224555_10116036	3300023088	Soil	MNDIELESKLKSVRVPERTQEYWNDFPSHVRMQLPRERREFTPQYAGRPRLAWACGLALAVAVVFVCVQFHPFQTVSLAITKQQRQFHTQLARLDAGLHVLMLNTDHMGYLLTEAN
Ga0224558_11414952	3300023090	Soil	MNDFELESKLKSVPLPERPDEYWNDFPSRVRVQLPRERREFAPQSAGRPRLAWAVGLVLAVVLVFGCIRFHPLQTMSLAITKQQQHFHARLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0209483_100013732	3300025862	Arctic Peat Soil	MNDFDLDSKLKSVPLPERPDEYWHEFPSGVRVQLRRERPESAPRRAWRPRLAWAGGFALAVALVLVCVQYHPFQTMALAITKQQRHFHAQLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0207663_1000138516	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNDFELESKLRSVRVPERPEEYWNDFPSRVRVQLPRERREFAPRNAWRPRLAWAGGLALAVALVIFCIQFHPLQTVSLAITKQQRQFHAQLARLDIGLHKLMLNTDGMGYLLTEAD
Ga0255351_10754291	3300026456	Soil	YWNDFPSRVRMQLPRERREFTPQNAGRSRLAWACGLALAVALVFVCVQFHPLQTASFAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTEAN
Ga0265337_10032454	3300028556	Rhizosphere	MNDLELESKLKSVRVPERPDEYWNDFPSHVRVQLRRERREFVPQSVWRPRFAWAGGFALAVALVFVCVQFHPLQTASLAITKQQRHFQAQLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0265337_10157254	3300028556	Rhizosphere	MNDFELESKLKSIRVPERPEEYWNEFPSSVRVQLRRERREFEPQSVRRPRLAWAGGFALAVALVFVCVQFHPLRTMSLAITKQQHQFHAQLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0265326_100276442	3300028558	Rhizosphere	MNDFELESKLKSLRVPERPEEYWSDFPSRVRVQLPRERPEFAPQNAWRPQFAWAGGFALAVALVLVCVQYHPLQTVSLAITKQQHQFHAQLARLYTGLHKLMLNTDGMGYLLNE
Ga0265319_11942872	3300028563	Rhizosphere	MNDFELESKLKSVPLPERTDEYWNDFPSRVRVQLRRERGEFTPQSVWRPRLAWAGGLALAVALVFVCVQFHPLQTASLAITKQQRQFHAQLARLDAGLHVL
Ga0265334_100038542	3300028573	Rhizosphere	MNDFELESKLKSLRVPERPEEYWSDFPSRVRVQLPRERPEFAPQNAWRPQFAWAGGFALAVALVLVCVQYHPLQTVSLAITKQQHQFHAQLARLDTGLHKLMLNTDGMGYLLNE
Ga0265334_102656912	3300028573	Rhizosphere	MNDFELESKLKSVPLPERTDEYWNDFPSRVRVQLRRERGEFTPQSVWRPRLAWAGGLALAVALVFVCVQFHPLQTESLAITKQQRQFHAQLARLDAGLH
Ga0265318_100147903	3300028577	Rhizosphere	MNDFELESKLKSVPLPERTDEYWNDFPSRVRVQLRRERGEFTPQSVWRPRLAWAGGLALAVALVFVCVQFHPLQTASLAITKQQRQFHAQLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0265323_100659401	3300028653	Rhizosphere	DFELESKLKSVRVPERPEEYWNDFPSRVRVQLRRERREFAPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITKQQRQFHTQLARLDVGLHKLMLNTDGMGYLLTEAN
Ga0265323_100960631	3300028653	Rhizosphere	MNDFELESKLKSVRVPERPEAYWEDFPSRVRVQLPRERREFARQRARGLRLAWAGGFAMAAALVIFCAEYHPFQTMSLAITKQQRQFHAQLARLDAGLHMLM
Ga0265336_100374262	3300028666	Rhizosphere	MNDFELESKLKSLRVPERPEEYWNDFPSRVRKQLPRERREFAPQSAWRPRLAWAGGFALAVALAVVCVQFHPLQTVSLAITKQQHQFHAQLARLDTGMHKLMLNTDGMGYLLTE
Ga0265338_100260525	3300028800	Rhizosphere	MNDFELESKLKDVRVPERTEEYWNDFPSRVRVQLRRERREFAPQSVWRPRLEWAGGLALAVALVFVCVQFHPLQTMSLAITKQQRQFHTQLVRLDAGLHKLMLNTDGMGYLLTEAN
Ga0265338_100484223	3300028800	Rhizosphere	MNDFDLESKLKNVRLPERPDGYWNDFPSRVRVQLRRERREFKPQYAHRPRLAWAGGFALAVALVFICVQFHPFQTVSLAITKQQRQFHAQLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0311361_101714523	3300029911	Bog	VADGQWKTTMNDFDLESKLKSVPVPARTEDYWENFPSQVRASLHHAPVEFAPRNFWLPRPVWSGGFALALALVFVCVQFHPLQTMSLAITKQQRHFHTQLARLDAGLHVLMLNTGGMGYLLADAN
Ga0311362_102897852	3300029913	Bog	MNDLELESKLKSFRVPERTEEYWNDFPSRVRMQMPRARREFTTQNAGRPRLAWVCGLALAVALVFVCVQFHPLQTASLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTEAN
Ga0311362_112319392	3300029913	Bog	MKDFNLDAKLKSLCVPERTEEYWNDFPAQVRVQLHHSRPELSPRPFGGLRFACAGCFALALILVCFEFHPLQIVSLAITKQEHHFHMQLARLDTGLHKLMLNTDGMGYLLAEAN
Ga0311359_107670901	3300029914	Bog	MNDFDLESKLKSLRVPARTEEYWNDFPSQVRVQLRQARPELSERSFGGLRFAFAGGFALALILVCIEFHPLQTVSLAIAKQERHLHTQLARLDTGLHKLMLNTDG
Ga0311359_111033891	3300029914	Bog	MNDFELESKLKSVRVPERRGEYWDDFPSRIRVQLRRDRWESAPQSAWRPRPAWVGGFAVAMVLVYVGVHFHPFQNVSLAITKQQRHFHSQLVRLDAGLHVLMLNTDHMG
Ga0311358_105388342	3300029915	Bog	EYWNDFPSRVRMQLPRERREFTPQNAGRPRLAWVCGLALAVALVFVCVQFHPLQTASLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTEAN
Ga0311363_100425395	3300029922	Fen	MNDFDLESKLKSVPVPARTEDYWENFPSQVRASLHHAPVEFAPRNFWLPRPVWSGGFALALALVFVCVQFHPLQTMSLAITKQQRHFHTQLARLDAGLHVLMLNTGGMGYLLADAN
Ga0311363_113951201	3300029922	Fen	MNDFELESKLKSVRVPERRGEYWDDFPSRIRVQLRRDRWESAPQSAWRPRPAWVGGFAVAMVLVYVGVHFHPFQNVSLAITKQQRHFHSQLVRLDAGLHVLMLNTDHMGYLLTEAN
Ga0311328_109977001	3300029939	Bog	MNDFDLESKLKSVPVPARTEDYWENFPSQVRASLHHAPVEFAPRNFWLPRPVWSGGFALALALVFVCVQFHPLQTMSLAITKQQRHFHTQLARLDAGLHVLMLNTGGMGYL
Ga0311331_115353951	3300029954	Bog	MKDFNLDAKMKSLCVPERTEEYWNDFPAQVRVQLHHSRPELSPRPFGGLRFACAGCFALALILVCFEFHPLQIVSLAITKQEHHFHMQLARLDTGLHKLMLNTDGMGYLLAEAN
Ga0265324_100361423	3300029957	Rhizosphere	MNDFELESKLKSLRVPECPEEYWNDFPSRVRMQLPRERREFAPQSAWRPRLVWAGGFALAVALVFVCVQFHPLQTVSLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTE
Ga0265324_102319992	3300029957	Rhizosphere	MNDFELESKLKSLRVPERPEEYWSDFPSRVRVQLPRERPEFAPQNAWRPQFAWAGGFALAVALVLVCVQYHPLQTVSLAITKQQHQFHAQLARLDTGLHKLMLNTDGMGYLLTE
Ga0311350_114196982	3300030002	Fen	MNDFELESKLKGARVPERPEEYWNDFPSRVRVQLPRERRELTPQYAWHQRFALAGGFALVMALVFVSVQFHPLRMMSLAITKQQRQFHAQLARLDAGLHKLMLNT
Ga0311345_107817621	3300030688	Bog	VARVRREKEIETVADGQWKTTMNDFDLESKLKSVPVPARTEDYWENFPSQVRASLHHAPVEFAPRNFWLPRPVWSGGFALALALVFVCVQFHPLQTMSLAITKQQRHFHTQLARLDAGLHVLMLNTGGMGYLLADAN
Ga0311366_107883641	3300030943	Fen	MNDFELESKLKGARVPERPEEYWNDFPSRVRVQLPRERRELTPQYAWHQRFALAGGFALVMALVFVSVQFHPIRTMSLAITKQQRQFHTQLARLDAGLHKIMLNTDGMGYLLTEAN
Ga0265330_101829142	3300031235	Rhizosphere	MNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLRRERREFAPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTVSLAITKQQRQFHTQLARLDVGLHKLMLNTDGMGYLLTEAN
Ga0265330_103547032	3300031235	Rhizosphere	MNDFELESKLKSVRVPERPEAYWEDFPSRVRVQLPRERREFAPQRARGLRLAWAGGFAMAAALVIFCAEYHPFQTMSLAITKQQRQFHAQLARLDAGLH
Ga0265320_104288421	3300031240	Rhizosphere	MNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLRRERREFAPQSAWRPRLAWAGGFALAVALVFVCVQFHPLRTMSLAITKQQHQFHAQLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0265340_100107505	3300031247	Rhizosphere	MNDFELESKLKSVRVPERTEAYWEDFPSRVSVQLPRERRGFAPQRAWGLRLARAGGFALAVALVFACVEFHPLRAVSLAITKQQRQIHAQLARLDTGLHKLMLNTDGMGYLLTEAN
Ga0265340_101073492	3300031247	Rhizosphere	MNDFELESKLKSVRVPERPEAYWEDFPSRVRVQLPRERREFARQRARGLRLAWAGGFAMAAALVIFCAEYHPFQTMSLAITKQQRQFHAQLARLDAGLHMLMLNTDGMGYLLTEAN
Ga0265316_101008612	3300031344	Rhizosphere	MNDFELESKLKSVRVPERPEAYWEDFPSRVRVQLPRERREFAPQRARGLRLAWAGGFAMAAALVIFCAEYHPFQTMSLAITKQQRQFHAQLARLDAGLHMLMLNTDGMGYLLTEAN
Ga0265316_101189753	3300031344	Rhizosphere	MNDFELESKLKSVRVPERPDDYWNDFPSRVRVQLPRERREVAPRSAWRPRLAWAGGFALAVALVFVCAQFHPLQTVSLAITKQQRQFHAQLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0265316_105409032	3300031344	Rhizosphere	MNDFELESKLKSVRVPERPEEYWNDFPSCVRVQLPRERREFEPQSAWRPRLAWAGGFALAATLVFVCVQFHPLQTASLAITKQQRQFHTQLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0302320_1000689610	3300031524	Bog	MNDFDLESKLKSLRVPARTEEYWNDFPSQVRVQLRQARPELSERSFGGLRFAFAGGFALALILVCIEFHPLQTVSLAIAKQERHLHTQLARLDTGLHKLMLNTDGMGYLLAEAN
Ga0302320_102191113	3300031524	Bog	MNGFELESKLKSIRVPERPEEYWDDFPSRVRVQLRRERREVAPRSAGRPRLAWAGGFALAVALMFSCVQLHPLRTMSLAITKQQRQFHAQLARLDAGLHVLILNTDGMGYLLTEAN
Ga0302320_103715732	3300031524	Bog	MNDFELESKLKSLRVPERPEEYWDDFPSRVRVQLPRQRREFVPQNAWRPRLAWAGGLALAVALVFACVEFRPIQTMSLAITKQQRQFHSQLARLDAGLHKIMLNTDGMGYLLTEAN
Ga0265314_105670162	3300031711	Rhizosphere	ERTDEYWNDFPSRVQLRRERREFTAQSAWRPRLAWAGGLALTVALVFVCVQFHPLQTASLAITKQQRQFHAQIARLDAGLHVLMLNTDGMGYLLTEAN
Ga0302321_1004385521	3300031726	Fen	MNDFDLESKLKSVRVPERPEEYWSDFPSRVRVQLPRERREYTPQYAWHQRFALAGGLAMVMALVFVSVQFHPLRTMSLAITKQQRQFHAQLARLDAGLH
Ga0302321_1010522102	3300031726	Fen	MNDFELESKLKSARVPERPDEYWNDFPSRVRVQLPRQRREFAPQSVWRPRLAWAGGLALAVVLVLACIEFRPIQTVSLAITKQQRQFHTQLARLDAGLHKIMLNTDGMGYLLTEAN
Ga0302322_1035383171	3300031902	Fen	MNDFELESKLKSVRVPERPDEYWNDFPSRVRVQLRRERHEFAPRRAWHPRLAWAGGFALAVALVFVCVQFHPLHTVSLAIATQQRHFHAQLARLDAGLHKLMLITDGMGYLLTEAD
Ga0306923_114223832	3300031910	Soil	MNDFELESKLKSVRVPERPDEYWNDFPAQVRGQLHRARPELPPRQFNGWRFAWAGGFTLALILICFRFHPIETVSLAITKQECHFHMQLARLDTGLHKLMLNTDGMGYLLAEAN
Ga0306920_1029939022	3300032261	Soil	MNDFELESKLKSVRVPERPDEYWNDFPAQVRGQLHRARPELPPRQFNGWRFAWAGGFTLALILICFRFHPIETVSLAITKQECHFHMQLARLDTGLHKLMLNTDGM
Ga0335085_114651831	3300032770	Soil	MNDFELESKLKGVRVPERSEEYWNDFPSRVRVQLPRERPEFAPHSAGRPRLAWAGGFALAVALVFACVQYHPLQTVSLAMTKQQRHFHAQLARLDAGLHVLMLNTDGMGYLLTDAN
Ga0335085_118245732	3300032770	Soil	MNDFDLESRLKSARVPERPDEYWEDFPSRIRVQLRRERREFARQSAWRPRFGWAGGFALAVALVFVCIEFHPLQTMSHAITKQQRHFHAQLARLDTGLHKLMLNTDGVGYL
Ga0335078_103368534	3300032805	Soil	MNDFDLESKLKSVRVPERSDEYWKDFPSRVRVQLPRERREFALQSPWRPRLAWAGGFALAVALVFVCVRFHPFQTVSLAITKQQRHFHTQLARLDAGLHV
Ga0326726_101936132	3300033433	Peat Soil	MNDFELVSKLKSVRLPERPEEYWNDFPSRVRVQLPRVRREFMPQSAWHPRFAWAGGLALAMALVFVSVQFHPLRTMSLAITKQQRQFHVQLARLDIGLHKLMLNTDGMGYLLTETD
Ga0371487_0031398_2138_2488	3300033982	Peat Soil	MNDFELESKLKSVRVPERAKEYWNDFPSSIRMQLPRERREFTPQNAGRPHLAWAGGLALAVALVLACVQFHPLQTASLAITKQQRQFHAQLARLDTGLHKLMLNTDGMGYLLTEAN
Ga0370501_0228229_3_401	3300034195	Untreated Peat Soil	REKEIKAPAGCHWRKTMNDFELESKLKSVRVPERPEEYWNDFPSRVRVQLRRERPEFAPQSAWRPRLAWAGGFALAVALVFVCVQFHPLQTMSLAITKQQRHFQAQLARLDAGLHVLMLNTDGMGYLLTEAN
Ga0370492_0055171_424_768	3300034282	Untreated Peat Soil	MNDFDLESKLGNLRVPERTEEYWNDFPLQVRMQLHRSRSELSPRSFGGLRFACAGCFALALILVCFQFHPLQTVSLAITIQERHFHMQLARLDTGLHKLMLNTDGMGYLLAEAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences