NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F076169

Metagenome / Metatranscriptome Family F076169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F076169
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 51 residues
Representative Sequence MAKKPTKNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFN
Number of Associated Samples 103
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.85 %
% of genes near scaffold ends (potentially truncated) 95.76 %
% of genes from short scaffolds (< 2000 bps) 89.83 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (84.746 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(16.949 % of family members)
Environment Ontology (ENVO) Unclassified
(63.559 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.525 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.46%    β-sheet: 0.00%    Coil/Unstructured: 61.54%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF001982-oxoacid_dh 68.64
PF02817E3_binding 30.51
PF00456Transketolase_N 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) componentEnergy production and conversion [C] 99.15
COG0021TransketolaseCarbohydrate transport and metabolism [G] 0.85
COG3959Transketolase, N-terminal subunitCarbohydrate transport and metabolism [G] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms84.75 %
UnclassifiedrootN/A15.25 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001344|JGI20152J14361_10012491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter3559Open in IMG/M
3300001354|JGI20155J14468_10109139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique956Open in IMG/M
3300001827|ACM21_1005189All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1484Open in IMG/M
3300001946|GOS2244_1052131All Organisms → cellular organisms → Bacteria → Proteobacteria2164Open in IMG/M
3300001964|GOS2234_1021059All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1619Open in IMG/M
3300001974|GOS2246_10164582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1175Open in IMG/M
3300002040|GOScombined01_100652261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1484Open in IMG/M
3300002040|GOScombined01_101549276All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2454Open in IMG/M
3300002040|GOScombined01_106156643All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique905Open in IMG/M
3300002040|GOScombined01_106611917All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2304Open in IMG/M
3300005404|Ga0066856_10492275All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique522Open in IMG/M
3300005424|Ga0066826_10081467All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1194Open in IMG/M
3300005427|Ga0066851_10233021Not Available575Open in IMG/M
3300005510|Ga0066825_10220518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique699Open in IMG/M
3300005514|Ga0066866_10102241Not Available1047Open in IMG/M
3300005523|Ga0066865_10432569All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique500Open in IMG/M
3300005837|Ga0078893_10014219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique709Open in IMG/M
3300006025|Ga0075474_10268123All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique510Open in IMG/M
3300006026|Ga0075478_10100350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique924Open in IMG/M
3300006329|Ga0068486_1045787All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1622Open in IMG/M
3300006332|Ga0068500_1200425All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique727Open in IMG/M
3300006337|Ga0068495_1366286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique924Open in IMG/M
3300006337|Ga0068495_1493077All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique676Open in IMG/M
3300006337|Ga0068495_1508491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1854Open in IMG/M
3300006351|Ga0099953_1035920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2272Open in IMG/M
3300006481|Ga0100229_1421019All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1394Open in IMG/M
3300006565|Ga0100228_1043811All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1129Open in IMG/M
3300007041|Ga0101669_127347All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique548Open in IMG/M
3300007114|Ga0101668_1023761All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1197Open in IMG/M
3300007114|Ga0101668_1057632All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique812Open in IMG/M
3300007133|Ga0101671_1043048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique659Open in IMG/M
3300007283|Ga0066366_10056136All Organisms → cellular organisms → Bacteria → Proteobacteria1425Open in IMG/M
3300007504|Ga0104999_1030894All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2784Open in IMG/M
3300007509|Ga0105012_1169463Not Available765Open in IMG/M
3300009193|Ga0115551_1206971All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique879Open in IMG/M
3300009335|Ga0117926_1117280All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter976Open in IMG/M
3300009376|Ga0118722_1412775Not Available574Open in IMG/M
3300009445|Ga0115553_1334547All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique581Open in IMG/M
3300009508|Ga0115567_10124177All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1749Open in IMG/M
3300009508|Ga0115567_10351479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique914Open in IMG/M
3300009790|Ga0115012_10667050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique830Open in IMG/M
3300010883|Ga0133547_11032074All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1588Open in IMG/M
3300012920|Ga0160423_10767753Not Available649Open in IMG/M
3300012920|Ga0160423_10884469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique600Open in IMG/M
3300012928|Ga0163110_11765096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.505Open in IMG/M
3300012936|Ga0163109_10231542All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1355Open in IMG/M
3300012936|Ga0163109_11120782All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique574Open in IMG/M
3300012954|Ga0163111_11306677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique712Open in IMG/M
3300012954|Ga0163111_12375285Not Available538Open in IMG/M
3300013195|Ga0116815_1002926All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1927Open in IMG/M
3300013231|Ga0116832_1017944All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique966Open in IMG/M
3300013252|Ga0116817_1007182All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1059Open in IMG/M
3300014030|Ga0116816_1038380All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique609Open in IMG/M
3300016703|Ga0182088_1280018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique921Open in IMG/M
3300017725|Ga0181398_1158382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique536Open in IMG/M
3300017765|Ga0181413_1093924Not Available914Open in IMG/M
3300017958|Ga0181582_10647997All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique641Open in IMG/M
3300017985|Ga0181576_10806924All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique555Open in IMG/M
3300018041|Ga0181601_10596119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique566Open in IMG/M
3300018426|Ga0181566_10165510All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1653Open in IMG/M
3300018428|Ga0181568_11407717Not Available517Open in IMG/M
3300019459|Ga0181562_10133715All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1367Open in IMG/M
3300020051|Ga0181555_1219798All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique713Open in IMG/M
3300020051|Ga0181555_1242732All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique661Open in IMG/M
3300020168|Ga0181588_10145795All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1161Open in IMG/M
3300020280|Ga0211591_1139510Not Available500Open in IMG/M
3300020280|Ga0211591_1139530Not Available500Open in IMG/M
3300020284|Ga0211649_1005023All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2011Open in IMG/M
3300020287|Ga0211471_1011910All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1104Open in IMG/M
3300020299|Ga0211615_1002629All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2258Open in IMG/M
3300020324|Ga0211630_1018382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1434Open in IMG/M
3300020334|Ga0211593_1110218All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique569Open in IMG/M
3300020357|Ga0211611_1115055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique645Open in IMG/M
3300020379|Ga0211652_10186670All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique633Open in IMG/M
3300020397|Ga0211583_10379689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique501Open in IMG/M
3300020398|Ga0211637_10260785Not Available689Open in IMG/M
3300020414|Ga0211523_10290881All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique670Open in IMG/M
3300020420|Ga0211580_10280771All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique684Open in IMG/M
3300020429|Ga0211581_10322626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique630Open in IMG/M
3300020429|Ga0211581_10477994All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique508Open in IMG/M
3300020437|Ga0211539_10310686All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique654Open in IMG/M
3300020450|Ga0211641_10551949All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique546Open in IMG/M
3300020452|Ga0211545_10488626Not Available556Open in IMG/M
3300020465|Ga0211640_10628841All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique578Open in IMG/M
3300021084|Ga0206678_10588849Not Available503Open in IMG/M
3300022074|Ga0224906_1146858All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique667Open in IMG/M
3300022937|Ga0255770_10113716All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1511Open in IMG/M
3300023084|Ga0255778_10391372All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique603Open in IMG/M
3300023105|Ga0255782_10043945All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2523Open in IMG/M
3300023178|Ga0255759_10482277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique731Open in IMG/M
3300023273|Ga0255763_1097990All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1337Open in IMG/M
(restricted) 3300024255|Ga0233438_10231907All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique740Open in IMG/M
(restricted) 3300024259|Ga0233437_1240804All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique738Open in IMG/M
(restricted) 3300024261|Ga0233439_10087884All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1628Open in IMG/M
(restricted) 3300024264|Ga0233444_10033457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter3338Open in IMG/M
(restricted) 3300024264|Ga0233444_10291460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique708Open in IMG/M
3300024292|Ga0228630_1068547All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique784Open in IMG/M
3300024335|Ga0228672_1119574All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique715Open in IMG/M
3300024417|Ga0228650_1145872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique618Open in IMG/M
3300025641|Ga0209833_1037197All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1757Open in IMG/M
3300025676|Ga0209657_1138229All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique699Open in IMG/M
3300025729|Ga0209558_1104048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique997Open in IMG/M
3300025771|Ga0208427_1033236All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1964Open in IMG/M
3300025890|Ga0209631_10176946All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1121Open in IMG/M
3300026077|Ga0208749_1131353Not Available517Open in IMG/M
3300026257|Ga0208407_1147797All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique715Open in IMG/M
3300026321|Ga0208764_10560774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique516Open in IMG/M
3300027553|Ga0208947_1010741All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2812Open in IMG/M
3300027801|Ga0209091_10141396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales1249Open in IMG/M
3300027844|Ga0209501_10300237Not Available987Open in IMG/M
3300027844|Ga0209501_10476995Not Available720Open in IMG/M
3300028132|Ga0228649_1091008All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique768Open in IMG/M
3300028397|Ga0228639_1133352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique591Open in IMG/M
3300031773|Ga0315332_10476979All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique788Open in IMG/M
3300031785|Ga0310343_10549304All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique855Open in IMG/M
3300032006|Ga0310344_10806555All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique795Open in IMG/M
3300032032|Ga0315327_10379632Not Available885Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine16.95%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine16.10%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh12.71%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine7.63%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine5.93%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater5.93%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater4.24%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater4.24%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine4.24%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine3.39%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.54%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.54%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.54%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.54%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.69%
Volcanic Co2 Seep SeawaterEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater1.69%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton0.85%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine0.85%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.85%
Water ColumnEnvironmental → Aquatic → Marine → Coastal → Unclassified → Water Column0.85%
Volcanic Co2 SeepsEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seeps0.85%
Volcanic Co2 SeepEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep0.85%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001344Pelagic Microbial community sample from North Sea - COGITO 998_met_02EnvironmentalOpen in IMG/M
3300001354Pelagic Microbial community sample from North Sea - COGITO 998_met_05EnvironmentalOpen in IMG/M
3300001827Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM21, ROCA_DNA110_2.0um_23kEnvironmentalOpen in IMG/M
3300001946Marine microbial communities from North James Bay, Santigo Island, EquadorEnvironmentalOpen in IMG/M
3300001964Marine microbial communities from Rosario Bank, Honduras - GS018EnvironmentalOpen in IMG/M
3300001974Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031EnvironmentalOpen in IMG/M
3300002040GS000c - Sargasso Station 3EnvironmentalOpen in IMG/M
3300005404Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205EnvironmentalOpen in IMG/M
3300005424Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49EnvironmentalOpen in IMG/M
3300005427Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65EnvironmentalOpen in IMG/M
3300005510Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45EnvironmentalOpen in IMG/M
3300005514Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263EnvironmentalOpen in IMG/M
3300005523Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006329Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500mEnvironmentalOpen in IMG/M
3300006332Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200mEnvironmentalOpen in IMG/M
3300006337Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0025mEnvironmentalOpen in IMG/M
3300006351Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0045mEnvironmentalOpen in IMG/M
3300006481Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0025mEnvironmentalOpen in IMG/M
3300006565Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125mEnvironmentalOpen in IMG/M
3300007041Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'control', water-icEnvironmentalOpen in IMG/M
3300007114Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble', waterEBis4EnvironmentalOpen in IMG/M
3300007133Seawater microbiome, Papua New Guinea CO2 seep, Dobu 'bubble', water-dsEnvironmentalOpen in IMG/M
3300007283Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_BEnvironmentalOpen in IMG/M
3300007504Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007509Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate bEnvironmentalOpen in IMG/M
3300009104Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009335Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300009376Combined Assembly of Gp0137079, Gp0137080EnvironmentalOpen in IMG/M
3300009445Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300013195Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station7_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300013231Marine hypoxic microbial communities from the Gulf of Mexico, USA - 5m_Station5_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300013252Marine hypoxic microbial communities from the Gulf of Mexico, USA - 11m_Station6_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300014030Marine hypoxic microbial communities from the Gulf of Mexico, USA - 11m_Station1_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300016703Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041407CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020051Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020168Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409BT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020280Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX556044-ERR599114)EnvironmentalOpen in IMG/M
3300020284Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556128-ERR598952)EnvironmentalOpen in IMG/M
3300020287Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX556018-ERR598969)EnvironmentalOpen in IMG/M
3300020299Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX555923-ERR599016)EnvironmentalOpen in IMG/M
3300020324Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX555936-ERR599033)EnvironmentalOpen in IMG/M
3300020334Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555938-ERR599091)EnvironmentalOpen in IMG/M
3300020357Marine microbial communities from Tara Oceans - TARA_B100000686 (ERX555950-ERR598956)EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020397Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)EnvironmentalOpen in IMG/M
3300020398Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)EnvironmentalOpen in IMG/M
3300020414Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)EnvironmentalOpen in IMG/M
3300020420Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)EnvironmentalOpen in IMG/M
3300020429Marine microbial communities from Tara Oceans - TARA_B100000614 (ERX556134-ERR599032)EnvironmentalOpen in IMG/M
3300020437Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)EnvironmentalOpen in IMG/M
3300020450Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)EnvironmentalOpen in IMG/M
3300020452Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)EnvironmentalOpen in IMG/M
3300020465Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)EnvironmentalOpen in IMG/M
3300021084Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022937Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaGEnvironmentalOpen in IMG/M
3300023084Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaGEnvironmentalOpen in IMG/M
3300023105Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaGEnvironmentalOpen in IMG/M
3300023178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaGEnvironmentalOpen in IMG/M
3300023273Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaGEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024259 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MGEnvironmentalOpen in IMG/M
3300024261 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_100_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300024292Seawater microbial communities from Monterey Bay, California, United States - 37DEnvironmentalOpen in IMG/M
3300024335Seawater microbial communities from Monterey Bay, California, United States - 90DEnvironmentalOpen in IMG/M
3300024417Seawater microbial communities from Monterey Bay, California, United States - 62DEnvironmentalOpen in IMG/M
3300025641Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)EnvironmentalOpen in IMG/M
3300025676Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025729Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_150m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300026077Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B (SPAdes)EnvironmentalOpen in IMG/M
3300026257Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)EnvironmentalOpen in IMG/M
3300026321Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)EnvironmentalOpen in IMG/M
3300027553Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_04_M0_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300028132Seawater microbial communities from Monterey Bay, California, United States - 61DEnvironmentalOpen in IMG/M
3300028397Seawater microbial communities from Monterey Bay, California, United States - 50DEnvironmentalOpen in IMG/M
3300031773Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915EnvironmentalOpen in IMG/M
3300031785Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MGEnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI20152J14361_1001249133300001344Pelagic MarineNTKGIIAKKPIKNLTALKVNGPMSSIPVSCAINVVPQIKVQSKALKRDVVFVIAIYTANL
JGI20155J14468_1010913923300001354Pelagic MarineITKGAMAKNPTKNLTALKVKGPISSMPVSCAINVVPQIKVHNKALSNDTVFDIIFR*
ACM21_100518963300001827Marine PlanktonKNLTALNVKGPILSMPVSWAINVVPQMKVHNKALNNDMDLLIFN*
GOS2244_105213133300001946MarineGIIAKNPTKNLTALNVKGPISSMPVSWAINVVPQINVHNKALNNEMVFDIIFR*
GOS2234_102105943300001964MarineMAKNPTKNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLVIVN*
GOS2246_1016458223300001974MarineMARKPTKNLTALNVKGPMLSMPVSWAIKVVPQMKVHNKALNKEMDLDIFN*
GOScombined01_10065226113300002040MarineGPILSMPVSWAIKVVPQIKVHNKALNNDMDLLIFN*
GOScombined01_10154927633300002040MarineDIKPTKNLTALKVSGPIVSIPVSWAIKVVPHIKVHNKAESNDVGFDIF*
GOScombined01_10615664323300002040MarineRKPTKNLTALNVKGPILSMPVSWAMKVVPQIKVHNKALNNDMDLLIFN*
GOScombined01_10661191713300002040MarineNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFN*
Ga0066856_1049227513300005404MarineNLTALKVNGPISSMPVSCAINVVPQINVHNKALKSESVFDIKSDYTASL*
Ga0066826_1008146713300005424MarineALNVKGPILSMPVSWAIKVVPQIKVQKSALNKDIDLDIF*
Ga0066851_1023302123300005427MarinePTKNLVALKVSGPILSIPVSWAIKVVPQIKVQKSALNKDIDLDIYLDCQLISKIFAEIFF
Ga0066825_1022051823300005510MarineGIMARKPTKNLTALNVKGPILSMPVSWAMKVVPHMKVHNKALNNDMVLDISY*
Ga0066866_1010224113300005514MarineGMIDKNPTKNLVALNVKGPILSMPVS*AIKVVPQIKVQKSALNKDIDLDIF*
Ga0066865_1043256923300005523MarineMAKKPTKNLTALNVKGPILSMPVSWAMKVVPQMKVHNKALNNDMVLDISY*
Ga0078893_1001421913300005837Marine Surface WaterAKKPTKNLTALNVKGPILSMRVS*AIKVVPHIKVHNKALNREMGLDILDYTASL*
Ga0075474_1026812323300006025AqueousKTNGVIAKKPMKNLTALNVNGPMLSIPVS*AINVVPQIKVHNKALNKEIVFDIT*
Ga0075478_1010035013300006026AqueousSNNKTNGVIAKKPMKNLTALNVNGPMLSIPVS*AINVVPQIKVHNKALNKEIVFDIT*
Ga0068486_104578723300006329MarineKNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFN*
Ga0068500_120042513300006332MarineLTALNVKGPILSMPVSWAIKVVPQIKVHNKALNNDMDLLIFN*
Ga0068495_136628613300006337MarineGIMARKPTKNLTALNVKGPILSMPVSWAIKVVPQIKVHNKALNNDMDLLIFN*
Ga0068495_149307723300006337MarineMAKKPTKNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFN*
Ga0068495_150849133300006337MarineIMAKKPTKNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFN*
Ga0099953_103592013300006351MarineIIAKKPMKNRAALNVKGPILSIPVSWAINVVPQIKVHSKALSKDIDFVINNYTANL*
Ga0100229_142101913300006481MarineKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFN*
Ga0100228_104381113300006565MarineGIMDKKPTKNLVALKVSGPILSIPVSWAIKVVPQIKVHNKALNNDMDLLIFN*
Ga0101669_12734723300007041Volcanic Co2 SeepSGVIAKKPTKNLTALNVKGPILSMPVSWAINVVPQMKVHNKALNNDMDLLIFN*
Ga0101668_102376123300007114Volcanic Co2 Seep SeawaterTALNVKGPILSIPVS*AIKVVPHIKVHNKALNMEMDLDIFDYTASL*
Ga0101668_105763223300007114Volcanic Co2 Seep SeawaterTALNVKGPILSIPVS*AIKVVPHIKVHNKALNREMELDIFDYTASL*
Ga0101671_104304823300007133Volcanic Co2 SeepsILSMPVS*AIKVVPHIKVHNKALNREMGLDILDYTASL*
Ga0066366_1005613613300007283MarineKNLVALNVKGPILSMPVSWAIKVVPQIKVQKRALNKDIDLDIF*
Ga0104999_103089413300007504Water ColumnANGIINKKPMKNLVALKVRGPILSMPVSWAIKVVPHIKVHNRALIKDIGLDIFLDC*
Ga0105012_116946323300007509MarineLFLSINRAKGIIDKNPTKNLVALNVKGPILSIPVSWAIKVVPQIKVQKSALNKDIDLDIF
Ga0117902_124875713300009104MarineNVKGPILSMPVSWAIKVVPQIKVQKSALKMEVVFDIFK*
Ga0115551_120697113300009193Pelagic MarineAKGMIAKNPTKNLTALKVKGPMSSIPVSWAINVVPQIKVHNRALNNDTVFDIVF*
Ga0117926_111728033300009335MarineMIFFFSNNNANGIINKKPMKNLVALKVRGPILSMPVSWAIKVVPHIKVHNRALIKDIGLDIFLDC*
Ga0118722_141277523300009376MarineNLVALNVKGPILSMPVSWAIKVVPQIKVQKSALNKDIGLDIF*
Ga0115553_133454713300009445Pelagic MarinePTKNLTALKVKGPISSIPVSWAINVVPQIKVHNKALKNDTDFDIVF*
Ga0115567_1012417713300009508Pelagic MarineTKNLTALKVKGPISSMPVSCAINVVPQIKVHNKALNNDTVFDIIFR*
Ga0115567_1035147913300009508Pelagic MarineNIMTKGTIAKNPTKNLTELKVNGPISSIPVSCAINVVPQMKVHNNALSNDTVLDIIF*
Ga0115012_1066705023300009790MarineKAKGTIAKNPTKNLTALKVNGPISSMPVSCAINVVPQIKVHNKALNNDTVFDIIF*
Ga0133547_1103207413300010883MarineAKKPTKNLTALNVKGPISSIPVSCAINVVPQIKVHSKALNSETVFVIVIFI*
Ga0160423_1076775323300012920Surface SeawaterPTKNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFD*
Ga0160423_1088446923300012920Surface SeawaterFISNKKTKGRIAKNPTKNLTALKVKGPMSSIPVSWAINVVPQIKVHNKALSNETVFDIIFI*
Ga0163110_1176509613300012928Surface SeawaterITKGAIAKNPIKNLTALKVKGPISSMPVSCAINVVPQIKVHNKALSNDTDFDIIF*
Ga0163109_1023154233300012936Surface SeawaterIAKKPTKNLTALKVNGPMSSIPVSCAIKVVPQINVHNKALNNETVFDIFFFK*
Ga0163109_1112078213300012936Surface SeawaterKNLTALNVKGPILSMPVS*AIKVVPHINVHKKALNREMGLDILDYTASL*
Ga0163111_1130667723300012954Surface SeawaterAKNPTKNLTALKVKGPMSSMPVSCAIKVVPQIKVHNKALSNDMVFDIIY*
Ga0163111_1237528513300012954Surface SeawaterPTKNLTALKVKGPMSSMPVSCAINVVPQIKVHNKALSNDTVFDITFR*
Ga0116815_100292633300013195MarineLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFN*
Ga0116832_101794423300013231MarineVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFN*
Ga0116817_100718213300013252MarineVKGPILSMPVSWAIKVVPQIKVHNKALNNDMDLLIFN*
Ga0116816_103838013300014030MarineKPTKNLTALNVKGPILSIPVS*AIKVVPHIKVHNKALNMEMDLDIFDYTASL*
Ga0182088_128001823300016703Salt MarshFISNNKTNGVIAKKPMKNLTALNVNGPILSIPVSXAIKVVPQIKVHSNALNKEIVFDIT
Ga0181398_115838223300017725SeawaterFFISNKKTNGVMAKKPMKNLTALNVNGPMLSIPVSXAIKVVPQIKVHSKALNKEIVFDIT
Ga0181413_109392413300017765SeawaterGDKIAKGAIAKKHTKNLTVMNVKGPISSMPVSWAINVVPQINVHNKALNSEMVFDIIFR
Ga0181582_1064799723300017958Salt MarshIMAKKPTKNLTALNVKGPILSMPVSWAMKVVPQMKVHNKALNSEMVLDISD
Ga0181576_1080692423300017985Salt MarshRKPTKNLTALNVKGPILSMPVSWAMKVVPQIKVHNKALNNDMDLLIFN
Ga0181601_1059611913300018041Salt MarshNKITKGAIAKNPTKNLTALNVKGPISSIPVSWAIKVVPQIKVHNKALNNEMVFDIIFR
Ga0181566_1016551033300018426Salt MarshNGRIARKPTKNLTALNVNGPISSIPVSWAINVVPQIKVHNKALNKDIDLDI
Ga0181568_1140771723300018428Salt MarshKTNGRIARKPTKNLTALNVNGPISSIPVSWAINVVPQIKVHNKALNKDIDLDI
Ga0181562_1013371523300019459Salt MarshLNVKGPILSMPVSXAMKVVPQMKVHNKALNNEMVLDISYYTASL
Ga0181555_121979823300020051Salt MarshNFFISNNKTNGVIAKKPMKNLTALNVNGPMLSIPVSXAINVVPQIKVQSKALNKEIVFDI
Ga0181555_124273223300020051Salt MarshLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFN
Ga0181588_1014579513300020168Salt MarshSGIMARKPTKNLTALNVKGPILSMPVSWAMKVVPQMKVHNKALNNDMDLLIFN
Ga0211591_113951023300020280MarineNKIKSGVMAKKPTKNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNKEIDLDIFG
Ga0211591_113953013300020280MarineNKIKSGVMAKKPTKNLTALNVKGPILSMPVSXAIKVVPQMKVHNKALNKEIDLDIFS
Ga0211649_100502333300020284MarineTSGIIARNPTKNLTALNVKGPILSMPVSWAIKVVPQMNVHNKALNNDMDLLIFN
Ga0211471_101191013300020287MarineNSNKIISGIMARKPTKNLTALNVKGPILSMPVSWAIKVVPQIKVHNKALNNDMDLLIFN
Ga0211615_100262933300020299MarineLNVKGPILSMPVSWAIKVVPQIKVHNKALNNDMDLLIFN
Ga0211630_101838233300020324MarineTKNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNKEIDLDIFG
Ga0211593_111021823300020334MarineTKNLTALNVKGPILSIPVSXAIKVVPQMKVHNKALNNDSDLDIFDYTANL
Ga0211611_111505523300020357MarineKIKSGVMAKKPTKNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNKEIDLDIFG
Ga0211652_1018667023300020379MarineLNVKGPILSMPVSWAINVVPQMKVHNKALNIEIDLDIFNYTANL
Ga0211583_1037968913300020397MarineNVKGPILSMPVSXAIKVVPHIKVHNKALISEMGLDILDYTASL
Ga0211637_1026078523300020398MarineSINNAIGIMDKKPTKNLVALNVRGPILSMPVSXAIKVVPQIKVQKRALNKDIDLDIFLDCQLISEIFAKIFF
Ga0211523_1029088113300020414MarineNLTALNVKGPILSMPVSXAIKVVPHIKVHNKALNREMGLDILDYTASL
Ga0211580_1028077113300020420MarineKNLTALNVNGPILSMPVSWAMNVVPQINVHNKALNNETLLDIILLNS
Ga0211581_1032262623300020429MarineGPMLSMPVSWAIKVVPQMKVHNKALNKEMDLDIFN
Ga0211581_1047799413300020429MarineTALNVKGPILSIPVSWAIKVVPQMKVHNKALNKEIDLDIIY
Ga0211539_1031068623300020437MarineSMPVSXAIKVVPHINVHNKALNREMGLDILDYTASL
Ga0211641_1055194913300020450MarineVMAKKPTKNLTALNVKGPILSIPVSXAIKVVPQMKVHNKALNKEMDFDIVN
Ga0211545_1048862623300020452MarineNNNANGIIVRKPIKNLDPLKVKGPILSMPVSXAINVVPQIKVHNSALNKDFDLDMYLYC
Ga0211640_1062884123300020465MarineISGVMAKKPTKNLTALNVKGPILSIPVSXAIKVVPQMKVHNKALNNDSDLDIFDYTANL
Ga0206678_1058884923300021084SeawaterNKKTNGVIAKKPMKNLTALNVNGPILSMPVSXAINVVPQIKVHSKALNKEIVFDIT
Ga0224906_114685813300022074SeawaterSNRRTKGIIAKKPIKNLAALNVKGPILSIPVSXAINVVPQIKVHSKALSKDIDFVINNYTANL
Ga0255770_1011371623300022937Salt MarshANAKKPTKNLTELKVNGPILSIPVSXAINVVPQMKVHNRALNKDIDFDIL
Ga0255778_1039137213300023084Salt MarshISGIMARKPTKNLTALNVKGPILSMPVSWAMKVVPQIKVHNKALNNDMDLLIFN
Ga0255782_1004394513300023105Salt MarshLNVKGPILSMPVSXAIKVVPHIKVHNKALNREIGLDILDYTASL
Ga0255759_1048227713300023178Salt MarshNSNIITSGVIAKKPTKNLTALNVKGPMLSIPVSXAIKVVPQIKVHNKALNNEIGLDILD
Ga0255763_109799013300023273Salt MarshNNTKGANAKKPTKNLTELKVNGPILSIPVSXAINVVPQMKVHNRALNKDIDFDIL
(restricted) Ga0233438_1023190723300024255SeawaterAKGTIAKNPTKNLTALKVKGPMSSIPVSWAINVVPQIKVHNKALNNDTVFGIVF
(restricted) Ga0233437_124080413300024259SeawaterKKTKGVIAKNPIKNLTALNVNGPMLSMPVSXAIKVVPQIKVHNNALNNEIVFDMIF
(restricted) Ga0233439_1008788413300024261SeawaterNKKTKGVIARNPIKNLTALNVNGPMLSIPVSXAIKVVPQIKVHNSALSNEVVFGMIF
(restricted) Ga0233444_1003345713300024264SeawaterTNGVIAKKPIKNLTALNVNGPILSIPVSXAIKVVPQIKVHSKALNKEIVFDIT
(restricted) Ga0233444_1029146023300024264SeawaterTKGVIARNPIKNLTALNVNGPMLSIPVSXAIKVVPQIKVHNSALSNEVVFDMIF
Ga0228630_106854713300024292SeawaterNFFISNNKTNGVIAKKPMKNLTALNVNGPMLSMPVSXAINVVPQIKVQSKALNKEIVFDI
Ga0228672_111957423300024335SeawaterNNKTNGVIAKKPMKNLTALNVNGPMLSMPVSXAINVVPQIKVQSKALNKEIVFDIT
Ga0228650_114587223300024417SeawaterFISNNKTNGVIAKKPMKNLTALNVNGPMLSMPVSXAINVVPQIKVHSKALNKEIVFDIT
Ga0209833_103719713300025641Pelagic MarineGVMAKKPIKNLTALNVNGPILSIPVSXAIKVVPQIKVHSNALNKEIVFDIT
Ga0209657_113822923300025676MarineNKKTKGVIARNPIKNLTALNVNGPILSIPVSXAIKVVPQIKVHNSALSNEVVFDMIF
Ga0209558_110404823300025729MarineKTKGVIARNPIKNLTALNVNGPMLSIPVSXAIKVVPQIKVHNSALSNEVVFDMIF
Ga0208427_103323633300025771AqueousNFFISNNKTNGVMAKKPIKNLTALNVNGPILSIPVSXAIKVVPQIKVHSNALNKEIVFDI
Ga0209631_1017694613300025890Pelagic MarineKIAKGAIAKNPTKNLTALKVKGPMSSIPVSCAINVVPQIKVHNKALNNDTVFDIIFLDSQFIGKIFT
Ga0208749_113135323300026077MarineLNVKGPILSIPVSXAIKVVPHIKVHNKALNREIDLDIFDYTASL
Ga0208407_114779713300026257MarineNKKTKGVIARNPIKNLTALNVNGPMLSIPVSXAIKVVPQIKVHNSALSNEVVFDMIF
Ga0208764_1056077413300026321MarineNPIKNLTALNVNGPMLSMPVSXAIKVVPQIKVHNSALNNEVVFDMIF
Ga0208947_101074133300027553MarineKGVIAKNPIKNLTALNVNGPMLSMPVSXAIKVVPQIKVHNNALNNEVVFDMIF
Ga0209091_1014139613300027801MarineFSNNNANGIIERKPIKNLVPLNVRGPILSMPVSWAINVVPQIKVHRKALNKDVDLDINLD
Ga0209501_1030023723300027844MarineSLTIFFFSNNNANGIIERKPIKNLAPLKVKGPILSMPVSWAIKVVPQIKVHKKALNKDIDLDMDLNC
Ga0209501_1047699513300027844MarineSANGIIERKPIKNLVPLKVNGPIVSIPVSXAINVVPQIKVHRKALNKDIGLDISLNC
Ga0228649_109100813300028132SeawaterNGVIAKKPMKNLTALNVNGPMLSMPVSXAINVVPQIKVQSKALNKEIVFDIT
Ga0228639_113335213300028397SeawaterIAKKPMKNLTALNVNGPMLSMPVSXAINVVPQIKVHSKALNKEIVFDIT
Ga0315332_1047697913300031773SeawaterNKTNGVIAKKPMKNLTALNVNGPMLSMPVSXAINVVPQIKVHSKALNKEIVFDIT
Ga0310343_1054930413300031785SeawaterALNVKGPILSIPVSWAIKVVPHINVHNKALIREMGLDILDYTASL
Ga0310344_1080655513300032006SeawaterGIMAKKPTKNLTALNVKGPILSIPVSWAIKVVPQMKVHNKALNNEMDLDILN
Ga0315327_1037963223300032032SeawaterGPILSMPVSXAINVVPQIKVQKRALNKDIDLDMCLYS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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