Metagenome / Metatranscriptome Family F076269

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076269
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	107 residues
Representative Sequence	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP
Number of Associated Samples	96
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.12 %
% of genes near scaffold ends (potentially truncated)	28.81 %
% of genes from short scaffolds (< 2000 bps)	81.36 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.390 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.407 % of family members)
Environment Ontology (ENVO)	Unclassified (22.881 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.068 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.78% β-sheet: 16.51% Coil/Unstructured: 47.71%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01872	RibD_C	5.08
PF13561	adh_short_C2	1.69
PF00696	AA_kinase	1.69
PF12704	MacB_PCD	0.85
PF00753	Lactamase_B	0.85
PF10518	TAT_signal	0.85
PF07394	DUF1501	0.85
PF00072	Response_reg	0.85
PF01734	Patatin	0.85
PF00583	Acetyltransf_1	0.85
PF00400	WD40	0.85
PF00107	ADH_zinc_N	0.85
PF00440	TetR_N	0.85
PF14870	PSII_BNR	0.85
PF13620	CarboxypepD_reg	0.85
PF01494	FAD_binding_3	0.85
PF14559	TPR_19	0.85
PF00872	Transposase_mut	0.85
PF12146	Hydrolase_4	0.85
PF00356	LacI	0.85
PF03253	UT	0.85
PF00144	Beta-lactamase	0.85
PF02776	TPP_enzyme_N	0.85
PF01261	AP_endonuc_2	0.85
PF07494	Reg_prop	0.85
PF07676	PD40	0.85
PF09966	DUF2200	0.85
PF04198	Sugar-bind	0.85
PF02518	HATPase_c	0.85
PF00069	Pkinase	0.85
PF02687	FtsX	0.85
PF05534	HicB	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	5.08
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	5.08
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.39
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.69
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.85
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.85
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.85
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	0.85
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.85
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.85
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.85
COG2390	DNA-binding transcriptional regulator LsrR, DeoR family	Transcription [K]	0.85
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	0.85
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.85
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.85
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	0.85
COG4413	Urea transporter	Amino acid transport and metabolism [E]	0.85
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
All Organisms	root	All Organisms	46.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
cellular organisms	root	All Organisms → cellular organisms	46.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	11.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	10.17 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	11.02 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.39 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	1.69 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.69 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	8.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.54 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.69 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	1.69 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.54 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.69 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	1.69 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.85 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	2.54 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.69 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.69 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.85 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.54 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.69 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.69 %
Weeksellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae	0.85 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.54 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.69 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.69 %
Cloacibacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Cloacibacterium	0.85 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.39 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.54 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.69 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.69 %
Cloacibacterium rupense	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Cloacibacterium → Cloacibacterium rupense	0.85 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8899560	All Organisms → cellular organisms → Bacteria	8548	Open in IMG/M
3300000550\|F24TB_11446606	Not Available	603	Open in IMG/M
3300000559\|F14TC_100918565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2181	Open in IMG/M
3300000787\|JGI11643J11755_11789545	Not Available	784	Open in IMG/M
3300000890\|JGI11643J12802_11193132	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300003203\|JGI25406J46586_10089032	Not Available	934	Open in IMG/M
3300003911\|JGI25405J52794_10036634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1030	Open in IMG/M
3300004052\|Ga0055490_10004711	All Organisms → cellular organisms → Bacteria	2617	Open in IMG/M
3300004114\|Ga0062593_102580619	Not Available	577	Open in IMG/M
3300004157\|Ga0062590_100755572	Not Available	886	Open in IMG/M
3300004463\|Ga0063356_102237658	Not Available	833	Open in IMG/M
3300004633\|Ga0066395_10118315	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300004643\|Ga0062591_100256241	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300005093\|Ga0062594_101612505	Not Available	673	Open in IMG/M
3300005184\|Ga0066671_10252330	Not Available	1087	Open in IMG/M
3300005293\|Ga0065715_10268219	Not Available	1118	Open in IMG/M
3300005332\|Ga0066388_100212549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2560	Open in IMG/M
3300005332\|Ga0066388_103770537	Not Available	773	Open in IMG/M
3300005332\|Ga0066388_105307688	Not Available	653	Open in IMG/M
3300005338\|Ga0068868_100627106	Not Available	955	Open in IMG/M
3300005340\|Ga0070689_100969721	Not Available	755	Open in IMG/M
3300005353\|Ga0070669_102012196	Not Available	505	Open in IMG/M
3300005364\|Ga0070673_101722342	Not Available	593	Open in IMG/M
3300005438\|Ga0070701_10180077	Not Available	1236	Open in IMG/M
3300005440\|Ga0070705_100875372	Not Available	720	Open in IMG/M
3300005441\|Ga0070700_100781592	Not Available	767	Open in IMG/M
3300005445\|Ga0070708_100157956	All Organisms → cellular organisms → Bacteria	2112	Open in IMG/M
3300005539\|Ga0068853_101125224	Not Available	757	Open in IMG/M
3300005578\|Ga0068854_100444954	Not Available	1081	Open in IMG/M
3300005617\|Ga0068859_102953542	Not Available	520	Open in IMG/M
3300005618\|Ga0068864_102281563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300005713\|Ga0066905_100044105	All Organisms → cellular organisms → Bacteria	2672	Open in IMG/M
3300005713\|Ga0066905_100218718	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300005713\|Ga0066905_100222777	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300005713\|Ga0066905_101290549	Not Available	656	Open in IMG/M
3300005713\|Ga0066905_101335065	Not Available	646	Open in IMG/M
3300005937\|Ga0081455_10009131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10229	Open in IMG/M
3300005937\|Ga0081455_10350525	Not Available	1041	Open in IMG/M
3300005983\|Ga0081540_1339493	Not Available	514	Open in IMG/M
3300006049\|Ga0075417_10641624	Not Available	542	Open in IMG/M
3300006178\|Ga0075367_10283862	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300006844\|Ga0075428_100151477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	2519	Open in IMG/M
3300006844\|Ga0075428_102505865	Not Available	528	Open in IMG/M
3300006845\|Ga0075421_101321252	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	797	Open in IMG/M
3300006846\|Ga0075430_101025976	Not Available	679	Open in IMG/M
3300006852\|Ga0075433_10223945	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300006852\|Ga0075433_10952745	Not Available	748	Open in IMG/M
3300006853\|Ga0075420_100647619	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	911	Open in IMG/M
3300006865\|Ga0073934_10470269	Not Available	757	Open in IMG/M
3300006904\|Ga0075424_102552200	Not Available	535	Open in IMG/M
3300006969\|Ga0075419_10532684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	819	Open in IMG/M
3300009147\|Ga0114129_12268178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300009156\|Ga0111538_13418775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300009162\|Ga0075423_10799807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	997	Open in IMG/M
3300009430\|Ga0114938_1173384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300009553\|Ga0105249_10039346	All Organisms → cellular organisms → Bacteria → Acidobacteria	4293	Open in IMG/M
3300009609\|Ga0105347_1242752	Not Available	738	Open in IMG/M
3300009792\|Ga0126374_10221744	Not Available	1213	Open in IMG/M
3300009792\|Ga0126374_11490433	Not Available	555	Open in IMG/M
3300009820\|Ga0105085_1098587	Not Available	570	Open in IMG/M
3300010043\|Ga0126380_10074521	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300010047\|Ga0126382_11575259	Not Available	608	Open in IMG/M
3300010359\|Ga0126376_10063247	All Organisms → cellular organisms → Bacteria	2674	Open in IMG/M
3300010360\|Ga0126372_10664520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1011	Open in IMG/M
3300010362\|Ga0126377_10085847	All Organisms → cellular organisms → Bacteria → Acidobacteria	2837	Open in IMG/M
3300010362\|Ga0126377_10089665	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Cloacibacterium → Cloacibacterium rupense	2781	Open in IMG/M
3300010362\|Ga0126377_10213753	All Organisms → cellular organisms → Bacteria → PVC group	1856	Open in IMG/M
3300010362\|Ga0126377_10222386	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300010362\|Ga0126377_11177935	Not Available	836	Open in IMG/M
3300010362\|Ga0126377_11667776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	712	Open in IMG/M
3300010366\|Ga0126379_10419494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1391	Open in IMG/M
3300010376\|Ga0126381_100991029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1212	Open in IMG/M
3300010403\|Ga0134123_12508355	Not Available	582	Open in IMG/M
3300010403\|Ga0134123_12876043	Not Available	550	Open in IMG/M
3300011435\|Ga0137426_1241381	Not Available	540	Open in IMG/M
3300012081\|Ga0154003_1003340	All Organisms → cellular organisms → Bacteria	4697	Open in IMG/M
3300012081\|Ga0154003_1031755	Not Available	939	Open in IMG/M
3300012204\|Ga0137374_10438375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1028	Open in IMG/M
3300012948\|Ga0126375_10102800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1697	Open in IMG/M
3300012948\|Ga0126375_10921424	Not Available	704	Open in IMG/M
3300012956\|Ga0154020_10580377	Not Available	922	Open in IMG/M
3300012971\|Ga0126369_12402265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	613	Open in IMG/M
3300013121\|Ga0172278_1393	All Organisms → cellular organisms → Bacteria	145179	Open in IMG/M
3300013297\|Ga0157378_10520702	Not Available	1191	Open in IMG/M
3300014325\|Ga0163163_11022002	Not Available	890	Open in IMG/M
3300014326\|Ga0157380_10078889	All Organisms → cellular organisms → Bacteria	2687	Open in IMG/M
3300018469\|Ga0190270_10000573	All Organisms → cellular organisms → Bacteria	16118	Open in IMG/M
3300019360\|Ga0187894_10013716	All Organisms → cellular organisms → Bacteria	6453	Open in IMG/M
3300019360\|Ga0187894_10021302	All Organisms → cellular organisms → Bacteria	4557	Open in IMG/M
3300019360\|Ga0187894_10041386	All Organisms → cellular organisms → Bacteria	2813	Open in IMG/M
3300019362\|Ga0173479_10590774	Not Available	579	Open in IMG/M
3300019487\|Ga0187893_10024998	All Organisms → cellular organisms → Bacteria	7138	Open in IMG/M
3300023211\|Ga0255842_1520794	Not Available	1219	Open in IMG/M
3300025907\|Ga0207645_10753592	Not Available	662	Open in IMG/M
3300025908\|Ga0207643_10246729	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300025922\|Ga0207646_10236635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1650	Open in IMG/M
3300025936\|Ga0207670_10841643	Not Available	766	Open in IMG/M
3300025942\|Ga0207689_10411321	All Organisms → cellular organisms → Bacteria → Acidobacteria	1128	Open in IMG/M
3300025961\|Ga0207712_10073435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2467	Open in IMG/M
3300025971\|Ga0210102_1082468	Not Available	693	Open in IMG/M
3300026075\|Ga0207708_10387818	Not Available	1153	Open in IMG/M
3300026089\|Ga0207648_10691316	Not Available	945	Open in IMG/M
3300026118\|Ga0207675_101524001	Not Available	689	Open in IMG/M
3300027870\|Ga0209023_10463598	Not Available	768	Open in IMG/M
3300027873\|Ga0209814_10096121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1255	Open in IMG/M
3300027873\|Ga0209814_10489003	Not Available	545	Open in IMG/M
3300027874\|Ga0209465_10387326	Not Available	700	Open in IMG/M
3300027907\|Ga0207428_10004721	All Organisms → cellular organisms → Bacteria	12887	Open in IMG/M
3300027909\|Ga0209382_10509608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1324	Open in IMG/M
3300031576\|Ga0247727_10609455	Not Available	819	Open in IMG/M
3300031576\|Ga0247727_10944289	Not Available	600	Open in IMG/M
3300031858\|Ga0310892_10408473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	886	Open in IMG/M
3300031892\|Ga0310893_10350983	Not Available	636	Open in IMG/M
3300032013\|Ga0310906_10545828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300032075\|Ga0310890_11187408	Not Available	621	Open in IMG/M
3300034659\|Ga0314780_220073	Not Available	505	Open in IMG/M
3300034671\|Ga0314796_188819	Not Available	503	Open in IMG/M
3300034672\|Ga0314797_134230	Not Available	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.17%
Host-Associated	Host-Associated	37.29%
Engineered	Engineered	2.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.24%
Plants	Host-Associated → Plants	35.59%
Aquatic	Environmental → Aquatic	5.93%
Wastewater	Engineered → Wastewater	2.54%
Fungi	Host-Associated → Fungi	1.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.56%
Cave	Environmental → Terrestrial → Cave	5.08%
Activated Sludge	Engineered → Wastewater → Activated Sludge	2.54%
Freshwater	Environmental → Aquatic → Freshwater	1.69%
Marine	Environmental → Aquatic → Marine	1.69%
Sediment	Environmental → Aquatic → Sediment	1.69%
Roots	Host-Associated → Plants → Roots	1.69%
Mycelium	Host-Associated → Fungi → Mycelium	1.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.80%
Loam	Environmental → Terrestrial → Soil → Loam	16.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	5.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	2.54%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.69%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.85%
Sand	Environmental → Terrestrial → Soil → Sand	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	5.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.69%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.08%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.39%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	3.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.54%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.69%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.69%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.69%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.69%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.85%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.85%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012081	Attine ant fungus gardens microbial communities from Florida, USA - TSFL087 MetaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013121	Activated sludge microbial communities from Jimei wastewater treatment plant (WWTP), Xiamen City, Fujian province, China	Engineered	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300023211	Activated sludge enriched bacterial communities from WWTP in Fort Collins, Colorado, USA ? CA	Engineered	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034672	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00455300	2088090015	Soil	MTFLLWLLFTALAVGLPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPSLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP
F24TB_114466062	3300000550	Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGRGSDRXLP*
F14TC_1009185652	3300000559	Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGRGSNRYLP*
JGI11643J11755_117895452	3300000787	Soil	MTFLLWLLFTALAVGXPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPXLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
JGI11643J12802_111931323	3300000890	Soil	MTFLLWLLFTALAVGLPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPSLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
JGI25406J46586_100890322	3300003203	Tabebuia Heterophylla Rhizosphere	MIFLLWLFFTALAVGIPPAFIARQLTKGRGQRVEIPGKAVTWGVGSFLLVYLAVTVPWLVVSWTGLIGAPWLLTGLILGIPASAWASNKWYRSFKDGSPLGSGSNRYLP*
JGI25405J52794_100366341	3300003911	Tabebuia Heterophylla Rhizosphere	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0055490_100047112	3300004052	Natural And Restored Wetlands	MTFLLWLFFTALAVGIPPGFIARQLTKGRGQYVEIPGKAVTWGVGSFLLVYLAVTVPWLVMSWTGLIGAPWLITGLILGAPASAWASKKWYRAFKDGKLGGGSNKYLP*
Ga0062593_1025806191	3300004114	Soil	GLVSTGRPPEDTFPLRRNTMTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKGGNLMGSGSNRYLP*
Ga0062590_1007555721	3300004157	Soil	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGLIGAPWLVTGLILGTPASAWASKKWYRTFKDGNLMGSGSNRYLP*
Ga0063356_1022376581	3300004463	Arabidopsis Thaliana Rhizosphere	MTFLLWLFVTALAAGIPPAFIARQLTKGRGQYVDISGKAVIWGISSFLLAYLAIAVPWMVISWSGLIGAPWLLTGLLLGTPAAAWASKKWYRTFKGGSLSGGGSNKYFP*
Ga0066395_101183152	3300004633	Tropical Forest Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0062591_1002562412	3300004643	Soil	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0062594_1016125051	3300005093	Soil	GFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0066671_102523301	3300005184	Soil	MTFLLWLFFTALAAGIAPGFIARQLTKDRGQYVEIPGKAVTWGVGSFLLLYLAVTVPWLVISWTGLIGAPWLLTGLILGIPASVWASKKWYRAFKDGSLLGGGSNRYLP*
Ga0065715_102682191	3300005293	Miscanthus Rhizosphere	RCHIKALVECKGGLVSTGRPPEDTFPLRRNTMTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0066388_1002125491	3300005332	Tropical Forest Soil	WLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVVSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGVPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0066388_1037705372	3300005332	Tropical Forest Soil	GIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0066388_1053076881	3300005332	Tropical Forest Soil	MTFLLWLLFTALAIGIPPGFIARQLTKGRGQGVEIPGKAVTWGVVSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGVPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0068868_1006271062	3300005338	Miscanthus Rhizosphere	WLLFTALAVGIPTAFIARQLTKGRGRGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0070689_1009697211	3300005340	Switchgrass Rhizosphere	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKGGNLMGSGSNRYLP*
Ga0070669_1020121961	3300005353	Switchgrass Rhizosphere	MTFLLWLLFTLLAVGVPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0070673_1017223421	3300005364	Switchgrass Rhizosphere	ALVECKGGLVSTGRPPEDTFPLRRNTMTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0070701_101800771	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTFLLWLLFTALAVGLPPGFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0070705_1008753721	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTFLLWLLFTLLAVGIPTGFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0070700_1007815921	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTFLLWLFFTALAAGILPGFVARQLTKGRGQYVEIPGKAVTWGVGSFLLLYLAVTVPWLVVSWTGLIGAPWLLTGLILGIPTSVWASKKWYRALKDGSLLGDGSDKYLP*
Ga0070708_1001579564	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTFLLWLLFTALAVGIPTGFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0068853_1011252242	3300005539	Corn Rhizosphere	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIDAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0068854_1004449542	3300005578	Corn Rhizosphere	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGIPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0068859_1029535422	3300005617	Switchgrass Rhizosphere	MTFLLWLFFTALAAGILPGFVARQLTKGRGQYVEIPGKAVTWGVGSFLLLYLAVTVPCLVISWSGFIGAPWLLTGLILGIPASAWASKKWYRALKDGSLTGGGSNKYLP*
Ga0068864_1022815631	3300005618	Switchgrass Rhizosphere	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRALKDGGLPGGGSNKYLP*
Ga0066905_1000441054	3300005713	Tropical Forest Soil	IPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGVPASAWASKKWYRSFKDGSLMGSGSNRYLP*
Ga0066905_1002187183	3300005713	Tropical Forest Soil	MTFLLWLLFTALAAGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGVPASAWASKKWYRSFKDG
Ga0066905_1002227771	3300005713	Tropical Forest Soil	TMTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0066905_1012905492	3300005713	Tropical Forest Soil	MTFLLWLLFTALAAGIPPGFIARQLTKGRGQGVDIPGKAVTWGVGSFLLVYLAVTAPWLVISWTGLIDAPWLITGLILGVPASAWASKKWYRSFKDG
Ga0066905_1013350651	3300005713	Tropical Forest Soil	MTFLLWLLFTALAAGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0081455_100091312	3300005937	Tabebuia Heterophylla Rhizosphere	MTFLLWLLFTALAVGIPPWFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0081455_103505251	3300005937	Tabebuia Heterophylla Rhizosphere	RQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRAFKDGNLMGSESNRYLP*
Ga0081540_13394932	3300005983	Tabebuia Heterophylla Rhizosphere	MTFLVWLLFTALAAGLLPGFVARQLTKGRGQFVDISGKAVTWGLGSFLLVYLAVTVPWLVVSWTSLIDAPWLLTGLILGAPASVLASKKWYRAFKDGSLSGGGSNRYLP*
Ga0075417_106416241	3300006049	Populus Rhizosphere	ALAVGIPPAIIARQLTKGRGQFVDISGKNTAWGIGSFLFVYLAVTIPWTLISWTGLISAPWLLTGLILGIPASAWASNKWYRAFKDGKLGSGSSGYLP*
Ga0075367_102838622	3300006178	Populus Endosphere	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGAFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSDKYFP*
Ga0075428_1001514773	3300006844	Populus Rhizosphere	MTFLLWLFFTALAVGIPPAIIARQLTKGRGQYADIPGKAVTWGIGSFLLAYLAVTVPWLVISWSGLIGAPWLITGLLLGVPASAWASKKWYRTFKDGRLPGGSNKYLP*
Ga0075428_1025058652	3300006844	Populus Rhizosphere	MIFLLWLLFTALAVGIPPAIIARQLTKGRGQFVDISGKNTAWGIGSFLFVYLAVTIPWTLISWTGLISAPWLLTGLILGIPASAWASNKWYRAFKDGKLGSGSSGYLP*
Ga0075421_1013212521	3300006845	Populus Rhizosphere	MTFLLWLLFTALAVGIPPGFIARQLTKGRGRGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0075430_1010259761	3300006846	Populus Rhizosphere	MTFLLWLLFTALAAGIPPGFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0075433_102239452	3300006852	Populus Rhizosphere	MTFLLWLLFTALAVGLPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSDKYFP*
Ga0075433_109527452	3300006852	Populus Rhizosphere	MTFLLWLFFTALAAGIAPGFIARQLTKDRGQYVEIPGKAVTWGVGSFLLLYLAVTVPWLVISWTGLIGAPWLFTGLILGIPASVWASKKWYRAFKDGSLLGGGSDRYLP*
Ga0075420_1006476192	3300006853	Populus Rhizosphere	GFIARQLTKGRGQGVEIPGKAVTWGIGSFLLVYLAVTVPWLVISWTGLINAPWLITGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0073934_104702692	3300006865	Hot Spring Sediment	MTFLLWLFFTALAVGIPPGFIARQLTKGRGQYVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIGAPWLLTGLILGAPASAWASKKWYRAFKDGKLGGGSNKYLP*
Ga0075424_1025522001	3300006904	Populus Rhizosphere	TMTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0075419_105326841	3300006969	Populus Rhizosphere	MTFLLWLLFTALAVGLPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0114129_122681781	3300009147	Populus Rhizosphere	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASNKWYRAFKDGNSLGGGSNRYLP*
Ga0111538_134187752	3300009156	Populus Rhizosphere	MTFLLWLLFTALAVGLPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNL
Ga0075423_107998071	3300009162	Populus Rhizosphere	MTFLLWLLFTALAVGIPPRLIARQLTKGRGQGVEVPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGVPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0114938_11733841	3300009430	Groundwater	MTFLLWLLFTALAVGIPTGFIARQLTKGRGQYVEISGKAVTWGVGAFLLVYLAVTVPWLVISWTGLIDAPWLLTGLILGAPASAWATKKWYRAFKDGTLPGGSNKYLP*
Ga0105249_100393463	3300009553	Switchgrass Rhizosphere	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGIPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0105347_12427522	3300009609	Soil	MIFLLWLLITLLAVGVPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLAISWTGLIDAPWLFTGLLLGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0126374_102217441	3300009792	Tropical Forest Soil	MTFLLWLLFTALAAGIPPGFIARQLTKGRGQGVDIPGKAVTWGVGSFLLVYLAVTAPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0126374_114904331	3300009792	Tropical Forest Soil	ARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIGAPWLITGLILGTPASAWASMKWYRSFKDGNLMGSGSNRYLP*
Ga0105085_10985872	3300009820	Groundwater Sand	FIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIGAPWLLTGLILGTPASAWASNKWYRSFKDGNLPGGGSNRYLP*
Ga0126380_100745211	3300010043	Tropical Forest Soil	MNFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVVSWTGLIGAPWLLTGLILGIPASAWASNKWYRAFKDGNPLGGGSNRYLP*
Ga0126382_115752591	3300010047	Tropical Forest Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVIWGVGSFLLVYLAVTVPWLAVSWTGLIGAPWLFTGLILGTPASAWASNKWYRAFKDGNPLGGGSNKYLP*
Ga0126376_100632471	3300010359	Tropical Forest Soil	GFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0126372_106645201	3300010360	Tropical Forest Soil	MTFLLWLFFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0126377_100858472	3300010362	Tropical Forest Soil	MTFLLWLFFTALAAGALPGFVARQLTKGRGQYVEIPDKAVSWGLGSFLLAYLAVTVPWLVVSWSGLIDAPWLLTGLILGIPTSAWASKKWYRAFKDGSLSGGGSNKYLP*
Ga0126377_100896652	3300010362	Tropical Forest Soil	MTFLLWLLFTALAVGIPPGLIARQLTKGRGQGVEIPEKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0126377_102137533	3300010362	Tropical Forest Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRAFKDGNLMGSESNRYLP*
Ga0126377_102223862	3300010362	Tropical Forest Soil	MTFLLWLLFTALAVGIPPWFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLIMGAPASAWASKKWYRSFKDGNLMGTGSNRYFP*
Ga0126377_111779352	3300010362	Tropical Forest Soil	MNFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVVSWTGLIGAPWLLTGLILGIPASAWASNKWYRAFKDGNP
Ga0126377_116677761	3300010362	Tropical Forest Soil	NTMTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0126379_104194942	3300010366	Tropical Forest Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGIIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0126381_1009910292	3300010376	Tropical Forest Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSDRYLP*
Ga0134123_125083551	3300010403	Terrestrial Soil	MTFLLWLLFTALAVGIPTGFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLLGSGSNRYLP*
Ga0134123_128760432	3300010403	Terrestrial Soil	MIFLLWLFFTALAAGILPGFVARQLTKGRGQYVEIPGKAVTWGVGSFLLLYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNR
Ga0137426_12413811	3300011435	Soil	LLFTALAVGIAPGFIARQLTKGRGQYVEIPGKAVTWGVGSFLLLYLAVTVPWLVISWSGFIGAPWLLTGLILGIPASAWASKKWYRALKDGSLGGGSDKYLP*
Ga0154003_10033405	3300012081	Attine Ant Fungus Gardens	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYR
Ga0154003_10317552	3300012081	Attine Ant Fungus Gardens	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGVPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0137374_104383752	3300012204	Vadose Zone Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMG
Ga0126375_101028003	3300012948	Tropical Forest Soil	FTALAACALPGFVARQLTKGRGQYVEIPDKAVSWGLGSFLLAYLAVTVPWLVVSWSGLIDAPWLLTGLILGIPTSAWASKKWYRAFKDGSLSGGGSNKYLP*
Ga0126375_109214242	3300012948	Tropical Forest Soil	MTFLLWLLFTALAVGIPPAFIARQLTKGRGQGVEIPGKAVTWGVGSFLLIYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0154020_105803772	3300012956	Active Sludge	SEQMSKGGNTLTFLLWLLFTALAVGIAPGFIARQLTKGRGEYVDISGKAVTWGVGSFLLLYLAVTVPWLVISWSGFIGAPWLLTGLILGTPASAWASKKWYRAFKDGSLGGGSDKYLP*
Ga0126369_124022651	3300012971	Tropical Forest Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIGAPWLITGLILGTPASAWASMKWYRSFKDGN
Ga0172278_139378	3300013121	Activated Sludge	MTFLLWLFFTALAVGIPPAFIARQLTKGRGQYVEIPGKAVTWGVGSFLLAYLAVTVPWLIISWTGLIGAPWLFTGLILGAPASAWASKKWYRAMKDGSLPGGGSNKYLP*
Ga0157378_105207023	3300013297	Miscanthus Rhizosphere	MIFLLWLFFTALAAGILPGFVARQLTKGRGQYAEIPGKAVTWGLGSFLLVYLAVTVPWLVVSWTGLIGAPWLLTGLILGIPASAWASKKWYRAFKDGSLSGGGSNRYLP*
Ga0163163_110220021	3300014325	Switchgrass Rhizosphere	LLFTALAVGIAPGFIARQLTKGRGQYVDIPGKAVTWGIGSFLLLYLAVTVPWLVISWSGVIGAPWLLTGLLLGIPASAWASKKWYRALKDGSLT
Ga0157380_100788892	3300014326	Switchgrass Rhizosphere	MTFLLWLLFTLLAVGVPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLAISWIGLIDAPWLFTGLLLGTPASAWASKKWYRSFKDGNLMGSGSNRYLP*
Ga0190270_100005738	3300018469	Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0187894_100137168	3300019360	Microbial Mat On Rocks	MTFLLWLFFTALAAGIPPGFIARQLTKGRGQYVEIPGKAVTWGVGSFLLVYLAVTMPWLVMSWTGLIGAPWLITGLLLGTPASAWASKKWYRAFKDGKLGGGSNKYLP
Ga0187894_100213022	3300019360	Microbial Mat On Rocks	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0187894_100413867	3300019360	Microbial Mat On Rocks	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGVPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0173479_105907741	3300019362	Soil	MTFLLWLLFTLLAVGVPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLAISWIGLIDAPWLFTGLLLGTPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0187893_100249987	3300019487	Microbial Mat On Rocks	MTFLLWLFFTALAAGIPPGFIARQLTKGRGQYVEIPGKAVTWGVGSFLLVYLAVTMPWLVMSWTGLIGAPWLITGLILGTPASAWASKKWYRAFKDGKLGGGSNKYLP
Ga0255842_15207942	3300023211	Activated Sludge	MNFLLWLFFTALAVGIAPGFIARQLTKGRGQYVEIPGKAVTWGVGSFLLLYLAVTVPWLVLSWSGFIGAPWLITGLLLGTPASAWASKKWYRALKDGSLSGGSNKYLP
Ga0207645_107535921	3300025907	Miscanthus Rhizosphere	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0207643_102467292	3300025908	Miscanthus Rhizosphere	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGSPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0207646_102366351	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGLIDAPWLVTGLILGTPASAWASKKWYRSFKDGNLLGEGDYARQAEQIARNLD
Ga0207670_108416431	3300025936	Switchgrass Rhizosphere	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLAISWIGLIDAPWLFTGLLLGTPASAWASKKWYRSFKGGNLMGSGSNRYLP
Ga0207689_104113211	3300025942	Miscanthus Rhizosphere	ARQLTKGRGRGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0207712_100734351	3300025961	Switchgrass Rhizosphere	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGIPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0210102_10824681	3300025971	Natural And Restored Wetlands	MTFLLWLFFTALAVGIPPGFIARQLTKGRGQYVEIPGKAVTWGVGSFLLVYLAVTVPWLVMSWTGLIGAPWLITGLILGAPASAWASKKWYRAFKDGKLGGGSNKYLP
Ga0207708_103878181	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	TLNFLLWLFFTALAVGIAPGFIARQLTKGRGQYVDIPGKAVTWGVGSFLLLYLAVTVPWLVVSWTGLIGAPWLLTGLILGIPTSVWASKKWYRALKDGSLLGDGSDKYLP
Ga0207648_106913162	3300026089	Miscanthus Rhizosphere	MTFLLWLLFTALAVGIPTAFIARQLTKGRGQGVEIPGKAVTWGVASFLLVYLAITIPWLVISWTGFIGAPWLVTGLILGTPASAWASKKWYRSFKDGSLMGSGSNRYLP
Ga0207675_1015240012	3300026118	Switchgrass Rhizosphere	MTFLLWLFFTALAAGILPGFVARQLTKGRGQYVEIPGKAVTWGVGSFLLLYLAVTVPWLVISWSGFIGAPWLITGLILGTPASAWASKKWYRALKDGSLSGGGSNKYLP
Ga0209023_104635981	3300027870	Freshwater And Sediment	LNFLLWLFFTALAVGIAPGFIARQLTKGRGQYVDIPGKAVTWGVGSFLLLYLAVTVPWLVISWSGVIGAPWLITGLLLGTPASAWASKKWYRALKDGSLTDGGSNKYLP
Ga0209814_100961212	3300027873	Populus Rhizosphere	MTFLLWLLFTALAVGIPPRLIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0209814_104890031	3300027873	Populus Rhizosphere	TALAVGIPPAIIARQLTKGRGQFVDISGKNTAWGIGSFLFVYLAVTIPWTLISWTGLISAPWLLTGLILGIPASAWASNKWYRAFKDGKLGSGSSGYLP
Ga0209465_103873261	3300027874	Tropical Forest Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVMSWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGSLMGSGSNRYLP
Ga0207428_100047212	3300027907	Populus Rhizosphere	MTFLLWLLFTALAVGLPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0209382_105096082	3300027909	Populus Rhizosphere	MIFLLWLLFTALAVGIPPAIIARQLTKGRGQFVDISGKNTAWGIGSFLFVYLAVTIPWTLISWTGLISAPWLLTGLILGIPASAWASNKWYRAFKDGKLGSGSSGYLP
Ga0247727_106094551	3300031576	Biofilm	MTFLLWLFFTALAVGIPPGFIARQLTKGRGQYVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWAGLIGAPWLLTGLILGAPASAWASKKWYRAF
Ga0247727_109442891	3300031576	Biofilm	MTFLLWLFFTALAVGIPPGFIARQLTKGRGQHVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIGAPWLLTGLILGAPASAWASKKWYR
Ga0310892_104084732	3300031858	Soil	MTFLLWLLFTALAVGLPPGFIARQLTKGRGRGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0310893_103509832	3300031892	Soil	MTFLLWLLFTALAAGIPPALIARQLTKGRGQFAELSGKAVTWGIGSFLLAYLAITVPWLVISWSGLIGAPWLLTGLLLGIPASAWASKKWYRTFKDGSLSGGGSNKYLP
Ga0310906_105458282	3300032013	Soil	MTFLLWLLFTALAVGLPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSDKYFP
Ga0310890_111874082	3300032075	Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0314780_220073_94_423	3300034659	Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGRGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNRYLP
Ga0314796_188819_52_381	3300034671	Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTVPWLVISWTGLIDAPWLITGLILGAPASAWASKKWYRSFKDGNLMGSGSNKYFP
Ga0314797_134230_113_442	3300034672	Soil	MTFLLWLLFTALAVGIPPGFIARQLTKGRGQGVEIPGKAVTWGVGSFLLVYLAVTIPWLVISWTGLIDAPWLITGLILGTPASAWASKKWYRSFKDGNLMGSGSNRYLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076269

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences