Basic Information | |
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Family ID | F076272 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 118 |
Average Sequence Length | 112 residues |
Representative Sequence | MRFTQGIRVRCDDPDALLRLLVEWDEAQATTDVMGYIGTRLLADRDEPGRYLILAEFAEVDGDLTPAEEAERNNQREETERWAQKLRALVDGEPEWAHYDELYRTGITGNLRTG |
Number of Associated Samples | 92 |
Number of Associated Scaffolds | 118 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 88.98 % |
% of genes near scaffold ends (potentially truncated) | 19.49 % |
% of genes from short scaffolds (< 2000 bps) | 76.27 % |
Associated GOLD sequencing projects | 86 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.79 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (100.000 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.407 % of family members) |
Environment Ontology (ENVO) | Unclassified (24.576 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (21.186 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 26.76% β-sheet: 26.76% Coil/Unstructured: 46.48% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.79 |
Powered by PDBe Molstar |
SCOP family | SCOP domain | Representative PDB | TM-score |
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d.58.4.3: Dimeric alpha+beta barrel | d1lq9a_ | 1lq9 | 0.78 |
d.58.4.17: Dimeric alpha+beta barrel | d6m35a_ | 6m35 | 0.74 |
d.58.4.18: Dimeric alpha+beta barrel | d2okqa1 | 2okq | 0.73 |
d.58.4.5: Dimeric alpha+beta barrel | d1iuja_ | 1iuj | 0.72 |
d.58.4.5: Dimeric alpha+beta barrel | d2zdpa2 | 2zdp | 0.72 |
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Pfam ID | Name | % Frequency in 118 Family Scaffolds |
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PF01243 | Putative_PNPOx | 20.34 |
PF00881 | Nitroreductase | 3.39 |
PF03992 | ABM | 2.54 |
PF00395 | SLH | 1.69 |
PF01042 | Ribonuc_L-PSP | 1.69 |
PF01546 | Peptidase_M20 | 1.69 |
PF13649 | Methyltransf_25 | 1.69 |
PF00106 | adh_short | 0.85 |
PF00496 | SBP_bac_5 | 0.85 |
PF00583 | Acetyltransf_1 | 0.85 |
PF13349 | DUF4097 | 0.85 |
PF07228 | SpoIIE | 0.85 |
PF00440 | TetR_N | 0.85 |
PF06071 | YchF-GTPase_C | 0.85 |
PF00152 | tRNA-synt_2 | 0.85 |
PF01494 | FAD_binding_3 | 0.85 |
PF13449 | Phytase-like | 0.85 |
PF00208 | ELFV_dehydrog | 0.85 |
PF00664 | ABC_membrane | 0.85 |
PF01212 | Beta_elim_lyase | 0.85 |
PF13508 | Acetyltransf_7 | 0.85 |
PF16859 | TetR_C_11 | 0.85 |
PF03704 | BTAD | 0.85 |
PF02518 | HATPase_c | 0.85 |
PF07690 | MFS_1 | 0.85 |
PF13540 | RCC1_2 | 0.85 |
PF13419 | HAD_2 | 0.85 |
COG ID | Name | Functional Category | % Frequency in 118 Family Scaffolds |
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COG0251 | Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family | Defense mechanisms [V] | 1.69 |
COG0654 | 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases | Energy production and conversion [C] | 1.69 |
COG1167 | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain | Transcription [K] | 1.69 |
COG0012 | Ribosome-binding ATPase YchF, GTP1/OBG family | Translation, ribosomal structure and biogenesis [J] | 0.85 |
COG0017 | Aspartyl/asparaginyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 0.85 |
COG0075 | Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG | Amino acid transport and metabolism [E] | 0.85 |
COG0076 | Glutamate or tyrosine decarboxylase or a related PLP-dependent protein | Amino acid transport and metabolism [E] | 0.85 |
COG0112 | Glycine/serine hydroxymethyltransferase | Amino acid transport and metabolism [E] | 0.85 |
COG0156 | 7-keto-8-aminopelargonate synthetase or related enzyme | Coenzyme transport and metabolism [H] | 0.85 |
COG0173 | Aspartyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 0.85 |
COG0334 | Glutamate dehydrogenase/leucine dehydrogenase | Amino acid transport and metabolism [E] | 0.85 |
COG0399 | dTDP-4-amino-4,6-dideoxygalactose transaminase | Cell wall/membrane/envelope biogenesis [M] | 0.85 |
COG0436 | Aspartate/methionine/tyrosine aminotransferase | Amino acid transport and metabolism [E] | 0.85 |
COG0520 | Selenocysteine lyase/Cysteine desulfurase | Amino acid transport and metabolism [E] | 0.85 |
COG0578 | Glycerol-3-phosphate dehydrogenase | Energy production and conversion [C] | 0.85 |
COG0626 | Cystathionine beta-lyase/cystathionine gamma-synthase | Amino acid transport and metabolism [E] | 0.85 |
COG0644 | Dehydrogenase (flavoprotein) | Energy production and conversion [C] | 0.85 |
COG0665 | Glycine/D-amino acid oxidase (deaminating) | Amino acid transport and metabolism [E] | 0.85 |
COG1003 | Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain | Amino acid transport and metabolism [E] | 0.85 |
COG1104 | Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family | Amino acid transport and metabolism [E] | 0.85 |
COG1190 | Lysyl-tRNA synthetase, class II | Translation, ribosomal structure and biogenesis [J] | 0.85 |
COG1921 | Seryl-tRNA(Sec) selenium transferase | Translation, ribosomal structure and biogenesis [J] | 0.85 |
COG1982 | Arginine/lysine/ornithine decarboxylase | Amino acid transport and metabolism [E] | 0.85 |
COG2008 | Threonine aldolase | Amino acid transport and metabolism [E] | 0.85 |
COG2269 | Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway) | Translation, ribosomal structure and biogenesis [J] | 0.85 |
COG2873 | O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent | Amino acid transport and metabolism [E] | 0.85 |
COG2902 | NAD-specific glutamate dehydrogenase | Amino acid transport and metabolism [E] | 0.85 |
COG3033 | Tryptophanase | Amino acid transport and metabolism [E] | 0.85 |
COG3629 | DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain | Transcription [K] | 0.85 |
COG3947 | Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains | Transcription [K] | 0.85 |
COG4992 | Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase | Amino acid transport and metabolism [E] | 0.85 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 100.00 % |
Unclassified | root | N/A | 0.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2170459016|G1P06HT02G0D9W | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 665 | Open in IMG/M |
3300000119|KGI_S1_ANT01_95mDRAFT_c10106552 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 815 | Open in IMG/M |
3300000136|KGI_S1_ANT02_95mDRAFT_c10052720 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales | 1223 | Open in IMG/M |
3300000362|SL_1KL_011_SEDDRAFT_10256967 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 519 | Open in IMG/M |
3300000365|SL_9KL_010_SEDDRAFT_10010897 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 5546 | Open in IMG/M |
3300001213|JGIcombinedJ13530_101401650 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 724 | Open in IMG/M |
3300001213|JGIcombinedJ13530_108150098 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 832 | Open in IMG/M |
3300001685|JGI24024J18818_10062306 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1321 | Open in IMG/M |
3300002231|KVRMV2_100026737 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 5251 | Open in IMG/M |
3300002231|KVRMV2_101224762 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales | 1701 | Open in IMG/M |
3300002568|C688J35102_120892249 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales | 2070 | Open in IMG/M |
3300004097|Ga0055584_100035171 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 4935 | Open in IMG/M |
3300004097|Ga0055584_100117597 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 2658 | Open in IMG/M |
3300004097|Ga0055584_100130377 | All Organisms → cellular organisms → Bacteria | 2522 | Open in IMG/M |
3300004097|Ga0055584_100610364 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1139 | Open in IMG/M |
3300004463|Ga0063356_100025045 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 5658 | Open in IMG/M |
3300005337|Ga0070682_100528181 | All Organisms → cellular organisms → Bacteria | 919 | Open in IMG/M |
3300005459|Ga0068867_100999915 | All Organisms → cellular organisms → Bacteria | 758 | Open in IMG/M |
3300005491|Ga0074212_101051 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 893 | Open in IMG/M |
3300005548|Ga0070665_101999113 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 585 | Open in IMG/M |
3300005655|Ga0073905_10073771 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1567 | Open in IMG/M |
3300005987|Ga0075158_10090625 | All Organisms → cellular organisms → Bacteria | 1775 | Open in IMG/M |
3300006038|Ga0075365_10027504 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 3620 | Open in IMG/M |
3300006038|Ga0075365_10149170 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1626 | Open in IMG/M |
3300006038|Ga0075365_10617011 | All Organisms → cellular organisms → Bacteria | 767 | Open in IMG/M |
3300006048|Ga0075363_100079924 | All Organisms → cellular organisms → Bacteria | 1787 | Open in IMG/M |
3300006051|Ga0075364_10140068 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1626 | Open in IMG/M |
3300006057|Ga0075026_100018504 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 3087 | Open in IMG/M |
3300006057|Ga0075026_100224106 | All Organisms → cellular organisms → Bacteria | 999 | Open in IMG/M |
3300006177|Ga0075362_10605263 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 567 | Open in IMG/M |
3300006178|Ga0075367_10160175 | All Organisms → cellular organisms → Bacteria | 1399 | Open in IMG/M |
3300006178|Ga0075367_10191684 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1275 | Open in IMG/M |
3300006354|Ga0075021_10009987 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 5150 | Open in IMG/M |
3300006755|Ga0079222_10036474 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2159 | Open in IMG/M |
3300008470|Ga0115371_11211193 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 5107 | Open in IMG/M |
3300008470|Ga0115371_11286353 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1582 | Open in IMG/M |
3300009002|Ga0102810_1114126 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 838 | Open in IMG/M |
3300009026|Ga0102829_1087774 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 961 | Open in IMG/M |
3300009481|Ga0114932_10000646 | All Organisms → cellular organisms → Bacteria | 41330 | Open in IMG/M |
3300009706|Ga0115002_10342334 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1118 | Open in IMG/M |
3300009873|Ga0131077_10096123 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 3619 | Open in IMG/M |
3300009873|Ga0131077_10249011 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1821 | Open in IMG/M |
3300010883|Ga0133547_10253456 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 3693 | Open in IMG/M |
3300011436|Ga0137458_1083442 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 899 | Open in IMG/M |
3300012955|Ga0164298_11031925 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 610 | Open in IMG/M |
3300012960|Ga0164301_11869494 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 507 | Open in IMG/M |
3300012984|Ga0164309_10194041 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1391 | Open in IMG/M |
3300012984|Ga0164309_10503318 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 928 | Open in IMG/M |
3300012985|Ga0164308_10158773 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1680 | Open in IMG/M |
3300012985|Ga0164308_10692394 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 878 | Open in IMG/M |
3300012985|Ga0164308_10751715 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 845 | Open in IMG/M |
3300012987|Ga0164307_10251888 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1233 | Open in IMG/M |
3300012988|Ga0164306_10284926 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1199 | Open in IMG/M |
3300013233|Ga0172420_11113817 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 590 | Open in IMG/M |
3300013308|Ga0157375_13189248 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 547 | Open in IMG/M |
3300013769|Ga0119887_1048177 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1230 | Open in IMG/M |
3300017792|Ga0163161_10945781 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 733 | Open in IMG/M |
3300017792|Ga0163161_11113495 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 679 | Open in IMG/M |
3300018429|Ga0190272_13335001 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 501 | Open in IMG/M |
3300018466|Ga0190268_12146702 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 520 | Open in IMG/M |
3300018476|Ga0190274_12269900 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 640 | Open in IMG/M |
3300018481|Ga0190271_10073879 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 3024 | Open in IMG/M |
3300018481|Ga0190271_12420680 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 628 | Open in IMG/M |
3300019756|Ga0194023_1101291 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 582 | Open in IMG/M |
3300021425|Ga0213866_10000273 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 42795 | Open in IMG/M |
3300022209|Ga0224497_10118380 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1069 | Open in IMG/M |
3300022214|Ga0224505_10319186 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 589 | Open in IMG/M |
3300022226|Ga0224512_10219240 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 975 | Open in IMG/M |
3300022309|Ga0224510_10289423 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 986 | Open in IMG/M |
3300022413|Ga0224508_10125815 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1702 | Open in IMG/M |
3300022413|Ga0224508_10616874 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 669 | Open in IMG/M |
3300024344|Ga0209992_10000768 | All Organisms → cellular organisms → Bacteria | 39841 | Open in IMG/M |
3300024346|Ga0244775_11244995 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 578 | Open in IMG/M |
(restricted) 3300024519|Ga0255046_10013681 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2756 | Open in IMG/M |
(restricted) 3300024521|Ga0255056_10632034 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 507 | Open in IMG/M |
3300025165|Ga0209108_10113868 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1448 | Open in IMG/M |
3300025324|Ga0209640_10591800 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 895 | Open in IMG/M |
3300025907|Ga0207645_11186749 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 513 | Open in IMG/M |
3300026089|Ga0207648_10735781 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 916 | Open in IMG/M |
3300027636|Ga0214469_1145313 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 671 | Open in IMG/M |
3300027784|Ga0207421_10007216 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus | 11890 | Open in IMG/M |
3300027858|Ga0209013_10048053 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 3008 | Open in IMG/M |
3300027858|Ga0209013_10105916 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1831 | Open in IMG/M |
3300027866|Ga0209813_10077952 | All Organisms → cellular organisms → Bacteria | 1090 | Open in IMG/M |
3300027894|Ga0209068_10057679 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1983 | Open in IMG/M |
3300028420|Ga0210366_10038826 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1500 | Open in IMG/M |
3300028590|Ga0247823_10202432 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1508 | Open in IMG/M |
3300028590|Ga0247823_10291712 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1234 | Open in IMG/M |
3300028590|Ga0247823_10475480 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 942 | Open in IMG/M |
3300028590|Ga0247823_10703876 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 759 | Open in IMG/M |
3300028920|Ga0272441_10497566 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 990 | Open in IMG/M |
3300029989|Ga0311365_11167183 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 664 | Open in IMG/M |
3300030619|Ga0268386_10502067 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 830 | Open in IMG/M |
3300031228|Ga0299914_10330810 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1338 | Open in IMG/M |
3300031229|Ga0299913_10541706 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1149 | Open in IMG/M |
3300031366|Ga0307506_10270603 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 654 | Open in IMG/M |
3300031539|Ga0307380_10015340 | All Organisms → cellular organisms → Bacteria | 9364 | Open in IMG/M |
3300031539|Ga0307380_11289917 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 559 | Open in IMG/M |
3300031566|Ga0307378_11071505 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 650 | Open in IMG/M |
3300031665|Ga0316575_10425597 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 571 | Open in IMG/M |
3300031691|Ga0316579_10066991 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1696 | Open in IMG/M |
3300031691|Ga0316579_10275255 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 814 | Open in IMG/M |
3300031918|Ga0311367_10107809 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2956 | Open in IMG/M |
3300031965|Ga0326597_11291585 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 714 | Open in IMG/M |
3300032132|Ga0315336_1000328 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 153430 | Open in IMG/M |
3300032138|Ga0315338_1000065 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 520715 | Open in IMG/M |
3300032139|Ga0316580_10048675 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1306 | Open in IMG/M |
3300032231|Ga0316187_10154432 | All Organisms → cellular organisms → Bacteria | 1787 | Open in IMG/M |
3300032231|Ga0316187_10577197 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 839 | Open in IMG/M |
3300032259|Ga0316190_10282472 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1139 | Open in IMG/M |
3300032260|Ga0316192_10598096 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 747 | Open in IMG/M |
3300032263|Ga0316195_10137025 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1278 | Open in IMG/M |
3300032273|Ga0316197_10009216 | All Organisms → cellular organisms → Bacteria | 6906 | Open in IMG/M |
3300032273|Ga0316197_10014978 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 5359 | Open in IMG/M |
3300032273|Ga0316197_10117983 | All Organisms → cellular organisms → Bacteria | 1620 | Open in IMG/M |
3300033407|Ga0214472_10480657 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 1156 | Open in IMG/M |
3300033429|Ga0316193_10492016 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 977 | Open in IMG/M |
3300034817|Ga0373948_0004006 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3 | 2303 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 14.41% |
Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 7.63% |
Sediment | Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment | 5.08% |
Sediment | Environmental → Aquatic → Marine → Coastal → Sediment → Sediment | 4.24% |
Worm Burrow | Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow | 3.39% |
Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 3.39% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 3.39% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.39% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 3.39% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 3.39% |
Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 2.54% |
Marine | Environmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine | 2.54% |
Alkaline Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Sediment → Alkaline Sediment | 2.54% |
Soil | Environmental → Terrestrial → Soil → Clay → Unclassified → Soil | 2.54% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 1.69% |
Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 1.69% |
Marine | Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine | 1.69% |
Wetland | Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland | 1.69% |
Marine Sediment | Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment | 1.69% |
Deep Subsurface | Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface | 1.69% |
Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment | 1.69% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 1.69% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.69% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.69% |
Wastewater | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater | 1.69% |
Sediment | Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment | 0.85% |
Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 0.85% |
Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 0.85% |
Marine Sediment | Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment | 0.85% |
Estuarine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine | 0.85% |
Marine | Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Marine | 0.85% |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 0.85% |
Seawater | Environmental → Aquatic → Marine → Gulf → Unclassified → Seawater | 0.85% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.85% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.85% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.85% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.85% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.85% |
Soil | Environmental → Terrestrial → Soil → Loam → Unclassified → Soil | 0.85% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.85% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.85% |
Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.85% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.85% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.85% |
Switchgrass, Maize And Mischanthus Litter | Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter | 0.85% |
Activated Sludge | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge | 0.85% |
Sewage Treatment Plant | Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Sewage Treatment Plant | 0.85% |
Wastewater Effluent | Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent | 0.85% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2170459016 | Litter degradation ZMR2 | Engineered | Open in IMG/M |
3300000119 | Marine microbial communities from chronically polluted sediments in Antarctica -King George Island site S1 sample ANT 01_9.5m | Environmental | Open in IMG/M |
3300000136 | Marine microbial communities from chronically polluted sediments in Antarctica - King George Island site S1 sample ANT 02_9.5m | Environmental | Open in IMG/M |
3300000362 | Alkaline sediment microbial communities from Cock Soda Lake, Kulunda Steppe, Russia - 1KL_011_SED | Environmental | Open in IMG/M |
3300000365 | Alkaline sediment microbial communities from Lake Tanatar, Kulunda Steppe, Russia - 9KL_010_SED | Environmental | Open in IMG/M |
3300001213 | Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly) | Environmental | Open in IMG/M |
3300001685 | Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 | Environmental | Open in IMG/M |
3300002231 | Marine sediment microbial communities from Santorini caldera mats, Greece - red mat | Environmental | Open in IMG/M |
3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
3300004097 | Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005491 | Sediment ecosystem from Lake Washington, Seattle, Washington, USA - Formaldehyde enrichment | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005655 | Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_supernatant | Engineered | Open in IMG/M |
3300005987 | Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 B DNA | Engineered | Open in IMG/M |
3300006038 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Host-Associated | Open in IMG/M |
3300006048 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Host-Associated | Open in IMG/M |
3300006051 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Host-Associated | Open in IMG/M |
3300006057 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012 | Environmental | Open in IMG/M |
3300006177 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Host-Associated | Open in IMG/M |
3300006178 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Host-Associated | Open in IMG/M |
3300006354 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 | Environmental | Open in IMG/M |
3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
3300008470 | Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563 | Environmental | Open in IMG/M |
3300009002 | Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573 | Environmental | Open in IMG/M |
3300009026 | Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 | Environmental | Open in IMG/M |
3300009481 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG | Environmental | Open in IMG/M |
3300009706 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 | Environmental | Open in IMG/M |
3300009873 | Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant | Engineered | Open in IMG/M |
3300010883 | western Arctic Ocean co-assembly | Environmental | Open in IMG/M |
3300011436 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2 | Environmental | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
3300013233 | Combined Assembly of Gp0198154, Gp0198156, Gp0198157, Gp0198161 | Environmental | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300013769 | Sewage treatment plant microbial communities from Vermont, USA - Sand_B | Engineered | Open in IMG/M |
3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300019756 | Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG | Environmental | Open in IMG/M |
3300021425 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284 | Environmental | Open in IMG/M |
3300022209 | Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_13 | Environmental | Open in IMG/M |
3300022214 | Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1 | Environmental | Open in IMG/M |
3300022226 | Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13 | Environmental | Open in IMG/M |
3300022309 | Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1 | Environmental | Open in IMG/M |
3300022413 | Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_21 | Environmental | Open in IMG/M |
3300024344 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes) | Environmental | Open in IMG/M |
3300024346 | Whole water sample coassembly | Environmental | Open in IMG/M |
3300024519 (restricted) | Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27 | Environmental | Open in IMG/M |
3300024521 (restricted) | Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_1 | Environmental | Open in IMG/M |
3300025165 | Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1 | Environmental | Open in IMG/M |
3300025324 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes) | Environmental | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027636 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq | Environmental | Open in IMG/M |
3300027784 | Alkaline sediment microbial communities from Lake Tanatar, Kulunda Steppe, Russia - 8KL_010_SED (SPAdes) | Environmental | Open in IMG/M |
3300027858 | Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 (SPAdes) | Environmental | Open in IMG/M |
3300027866 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) | Host-Associated | Open in IMG/M |
3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300028420 | Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.641 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300028590 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30 | Environmental | Open in IMG/M |
3300028920 | Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Prop-6N | Environmental | Open in IMG/M |
3300029989 | III_Fen_N1 coassembly | Environmental | Open in IMG/M |
3300030619 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq) | Environmental | Open in IMG/M |
3300031228 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 | Environmental | Open in IMG/M |
3300031229 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 | Environmental | Open in IMG/M |
3300031366 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S | Environmental | Open in IMG/M |
3300031539 | Soil microbial communities from Risofladan, Vaasa, Finland - UN-3 | Environmental | Open in IMG/M |
3300031566 | Soil microbial communities from Risofladan, Vaasa, Finland - UN-1 | Environmental | Open in IMG/M |
3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Host-Associated | Open in IMG/M |
3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Host-Associated | Open in IMG/M |
3300031918 | III_Fen_N3 coassembly | Environmental | Open in IMG/M |
3300031965 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185 | Environmental | Open in IMG/M |
3300032132 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5 | Environmental | Open in IMG/M |
3300032138 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #8 | Environmental | Open in IMG/M |
3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Host-Associated | Open in IMG/M |
3300032231 | Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1 | Environmental | Open in IMG/M |
3300032259 | Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 | Environmental | Open in IMG/M |
3300032260 | Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrow | Environmental | Open in IMG/M |
3300032263 | Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1 | Environmental | Open in IMG/M |
3300032273 | Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A oxic | Environmental | Open in IMG/M |
3300033407 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175 | Environmental | Open in IMG/M |
3300033429 | Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2 | Environmental | Open in IMG/M |
3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
2ZMR_00129750 | 2170459016 | Switchgrass, Maize And Mischanthus Litter | MRFTQGISVRCANAGALADLLARWDELQSASDVMGYIGTRLLADRDDPGHYLILAEFAEVDGDLSAADEAELNNQRVETNRWAAELRSLVQGEPDWIHYDELYRTGITGNIRTG |
KGI_S1_ANT01_95mDRAFT_101065522 | 3300000119 | Marine | MQVRCADPDALIELLAEWDAGQSRSEVMGYIGTRLLADREQPGQYMILSEFAEVDGDITAADEAELNNHRVETERWADXLRSLVESEPHWIHFDELYRTG |
KGI_S1_ANT02_95mDRAFT_100527202 | 3300000136 | Marine | MQVRCADPDALIELLAEWDAGQSRSEVMGYIGTRLLADREQPGQYMILSEFAEVDGDITAADEAELNNHRVETERWADKLRSLVESEPHWIHFDELYRTGITGSIRTR* |
SL_1KL_011_SEDDRAFT_102569671 | 3300000362 | Alkaline Sediment | MMKFEQGIWLKCSDPDALVQLLAAWDLDQAATHVMGYIGTRLLADRDKPGSYLILAEFAEADGDLTAAEEAERNNQREETDQWAQKLRALADGELAWTHYDELYRTGVTGDLRTG* |
SL_9KL_010_SEDDRAFT_100108975 | 3300000365 | Alkaline Sediment | MMKFEQGIWLKCSDPDALVQLLAAWDLDQAATHVMGYIGTRLLADRDKPGSYLILAEFAEADGDLTAAEEAERNNQREETDQWAQKLRALADGELTWTHYDELYRTGVTGDLRTG* |
JGIcombinedJ13530_1014016502 | 3300001213 | Wetland | MRFAQGIRVRCADPDGLLRLLVEWDKGQATTDVMGYIGTRLLADRDDPGSYLIVAEFAEVDGDLTPAEEAERNNQREETERWAQKLRALVGGEPEWTHYDELYRTGITGNLRTG* |
JGIcombinedJ13530_1081500981 | 3300001213 | Wetland | MRFSQGIRVRCTDAEGLVELLVEWDQGQATTDVMGYIGTRLLADREDPGCYLIVADFAEVDGDLTPAEEAERNNRREETERWAQKLRELVGGEPEWTHYDELYRTGITGNLRT |
JGI24024J18818_100623062 | 3300001685 | Marine | MRFTQGMSVRCGDTDALVDLLAEWDQAHSTSEVVGYIGTRLLVDRDQPGCYMILADFAEVDGDLSPAEEAELNNQREETDRWVGKLRDLVEGEPEWNHYDEIYRTGITGNLRTG* |
KVRMV2_1000267377 | 3300002231 | Marine Sediment | MKFEQSIVFECGDPDALIDLMIEWDEGQATSDVMGYIGTRLLANRDHPGRYMXXAEFAEVDGDLTPAEEAERNNQREATELWVTKLRALADAEPEWIHFDELYRTGLTGDLRTG* |
KVRMV2_1012247622 | 3300002231 | Marine Sediment | MRFAQGIKVQSDDAEALVELLVEWDAGQSRTDVMGYIGTRLLADRENPGTYMILAEFAEVDGDVSAAAEAERNNQRLETERWGTKLRELVDGEPDWIHFDEMYRTGITGNLRTG* |
C688J35102_1208922492 | 3300002568 | Soil | MMRFAQGIRVHCDDPDGLLALLADWDKRQATGEVMGYIGTRLLADRDEPGCFLIIAEFAEVDGDLTPAAEAERNNRRAETEEWARQLRALVDGEPEWTHYDELYRTGITGNLRTG* |
Ga0055584_1000351712 | 3300004097 | Pelagic Marine | MKFSQAIRVRAADPDQLIELLAEWDRGQAADEIMGYIGTRLLADRDSPGDYMILAEFAEVDGDLTAAEEAERNNQRERTEAWARKLRELVEGEPEWVHYDEYYRTGLTGDLRTG* |
Ga0055584_1001175973 | 3300004097 | Pelagic Marine | MKFAQAINVQSDDPDALVELLAEWDRGQAAAEIMGYIGTRLLANRDEPGHYVILAEFAQVDDDTSSADEAVLNNRRQETEKWAEKLRALVTGEPEWVHFDELYRTGLTGDLRTG* |
Ga0055584_1001303773 | 3300004097 | Pelagic Marine | MKFTQTISVRCGDADALTALLAEWDQLQANSELMGYIGTRLLADRDDRGHFLIVADFAQVDADVPSADEAERNNQRDATEAWASRLRDLVAGEPEWEHFDELYRTGVTGSLRTG* |
Ga0055584_1006103642 | 3300004097 | Pelagic Marine | MKFCQFIRVRSDQPDRLVDLLVEWDRAQAGDEVMGYIGTRLLADRDHPGSYLILAEFAEVDGDRTAAEEAEVNNQRERTEEWARALRELVDGEPEWVHYDEHYRTGITGDRRTG* |
Ga0063356_1000250452 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MRFSQEMRVRCSDPDALVALLAEWDRGQAAADIMGYIGTRLLADRDHPGHYVILAEFAEVDGDVPAADEAARNNQRQETEQWAAKLRALVDGEPEWVHFDELYRTGITGSLRTG* |
Ga0070682_1005281812 | 3300005337 | Corn Rhizosphere | MRFTQGIRVRCDDPDALQQLMAEWDAAQATTDVMGYIGTRLLADRDDPGCFLILAEFAEVDGDLSPADEAERNNQREETSRWAQKLRSLVEGEPDWSHYDELYRTGITGNLRTG* |
Ga0068867_1009999152 | 3300005459 | Miscanthus Rhizosphere | MRFTQSINFRCADQEALVALLAEWDEGQATTDVMGYIGTRLLRDRDDAGRYLILAEFAEVDGDLTPAEEAERNNQREATQRWAERLRALVGGEPEWAHFDELYRTGLTGNLRTG* |
Ga0074212_1010512 | 3300005491 | Sediment | MRFTQGIRVRCGEADTLVHLLAEWDQLQSATDVMGYIGTRLLADREEPGCFLIMAEFAEVDGDVTAAVEAERNNQRAETEQWVAKLRSLVEGEPEWVHFDELYRTGITGNLKTG* |
Ga0070665_1019991132 | 3300005548 | Switchgrass Rhizosphere | MRFAQGIRVRCTDPEALMKLLVEWDEAQASTELMGYIGTRLLADRDEPGWYLILAEFAEVDGDLTPAEEAERNNQREETERWAQQLRTLVHGEPEWIHFDELYRTGITGNLRTG* |
Ga0073905_100737711 | 3300005655 | Activated Sludge | MRFQQGIRVTCSDPEALVQLLVAWDAGQATTEVMGYIGTRLLADRDEPGAFLILAEFAEVDGDLTPAEEAERNNRREETERWAQKLRALLGGEPIWTHYDELYRTGITGNLRTG* |
Ga0075158_100906252 | 3300005987 | Wastewater Effluent | MRFQQGIRVTCSDPEALVQLLVEWDAGQATTEVMGYIGTRLLADRDEPGAFLILAEFAEVDGDLTPAEEAERNNRREETERWAQKLRALIGGEPIWTHYDELYRTGITGNLRTG* |
Ga0075365_100275042 | 3300006038 | Populus Endosphere | MRFTQGIRVRCADPDALWKLLAEWDHGQATTDVMGYIGTRLLADRDEPDCYLILADFAEVDGDLTPAEEAERNNQREETARWAEKLRALVGGEPEWTHYDELYRTGITGNLRTG* |
Ga0075365_101491701 | 3300006038 | Populus Endosphere | MKFAQGIRVRCGDPEALVVLLAEWDAGQATTDVTGYIGTRLLADRDDPGAYLILAEFAEVDGDLSPAQEAERNNQREVTERWAEKLRALVEGEPAWIHFDELYRTGITGNLHTG* |
Ga0075365_106170112 | 3300006038 | Populus Endosphere | MTRFTQGIRVRCTDPDRLIELLAGWDRNQATTDVMGYIGTRLLADRDDVGCYLILADFAEVDGDLTPAEEAERNNQREETERWVQALRELVGTEPEWSHFDEVYRTGITGNLRTG* |
Ga0075363_1000799242 | 3300006048 | Populus Endosphere | MRFTQGIRVRCGDTDALIELLNDWDRRHATAEIIGYIGTRLLADRDDPGTFLILADFAEVDGDLTPAEEAERNNQREETERWVRDLRALVGAEPEWSHYDELYRTGITGNLRTG* |
Ga0075364_101400682 | 3300006051 | Populus Endosphere | MRFTQGIRVRCADTDALIELLNDWDRRHATAEIIGYIGTRLLADRDDPGTFLILADFAEVDGDLTPAEEAERNNQREETERWVRDLRALVGAEPEWSHYDELYRTGITGNLRTG* |
Ga0075026_1000185044 | 3300006057 | Watersheds | MRFAQGIRVRCADPAALQDLLAEWDAGQATTDVMGYIGTRLLADRDQPGTYLILAEFAEVDGDLTPAAEAERNNQRQETERWAQKLRALVTGEPEWAHYDELYRTGITGNLRTG* |
Ga0075026_1002241062 | 3300006057 | Watersheds | MRFTQGIRVRCTDPDALLELLAEWDRGQATTDVMGYIGTRLLADRDEAGCYLILADFAEVDGDLTPAEEAERNNQREETARWAEKLRALVGGEPEWTHYDELYRTGITGNLRTG* |
Ga0075362_106052631 | 3300006177 | Populus Endosphere | MKFAQGIRVRCADPKALVQLLAEWDQGQATTDVMGYIGTRLLADRDEPGSYLILAEFAEVDGDLTPAEEAERNNQREETERWAQKLRELVDGEPDWIHYDELYRTGITGNLRSG* |
Ga0075367_101601752 | 3300006178 | Populus Endosphere | MRFTQGIRVRCTDPDGLVGLIIEWDRAQATSEVMGYIGTRILADRDESGCYLILADFDEVDGDLTPAEEAERNNQREETARWAEGLRALVDGEPVWTHYDELYRTGITGNLRTG* |
Ga0075367_101916842 | 3300006178 | Populus Endosphere | MRFTQGIRVRCANTDALIELLNDWDRRHATAEIIGYIGTRLLADRDDPGTFLILADFAEVDGDLTPAEEAERNNQREETERWVRDLRALVGAEPEWSHYDELYRTGITGNLRTG* |
Ga0075021_100099876 | 3300006354 | Watersheds | MMRFAQGIRVRSDHRDELVALLADWDRSQATGEVMGYIGTRLLADRDDPGCFLIIAEFAEVDGDLTPAAEAERNNRREETERWAEQLRALVDGEPVWTHYDELYRTGLTGNLRTG* |
Ga0079222_100364742 | 3300006755 | Agricultural Soil | MRFAQGIRVRSEHPDGLVALLADWDKGQATGEVMGYIGTRLLADRDEPGCYLIIAEFAEVDGDLTPAAEAERNNRREETERWAQQLRALVDGEPEWAHYDELYRTGITGNLRTG* |
Ga0115371_112111933 | 3300008470 | Sediment | MKYAQGISIRCDDPDALVKLLAEWDEAQSSSDVMGYIGNRLLADRDDPGLYMILAEFAEVDGDLTPAQEAERNNQRAETERWATELRALVDGEPDWIHFDELYRTGITGNLRTG* |
Ga0115371_112863533 | 3300008470 | Sediment | MQVQCGDPDALLQLLAEWDAGQSKSEVMGYIGTRLLADRDQPGQYMILSDFAEVDGDLTAADEAEVNNQRLETERWAEKLRSLVEGEPQWIHFDELYRTGITGSLRTR* |
Ga0102810_11141261 | 3300009002 | Estuarine | MRFSQEMRVRCSDPEALVELLAEWDRGQATSDIMGYIGTRLLADRDHPGHYVILAEFAEVDGDVPAADEAELNNQRHETDRWAAKLRALVDDEPEWLHYDELYRTGVTGNLRTG* |
Ga0102829_10877742 | 3300009026 | Estuarine | MRFSQEMRVRCSDPEALVELLAEWDRGQATSDIMGYIGTRLLADRDHPGHYVILAEFAEVDGDVPAADEAERNNQRHETDRWAAKLRALVDDEPEWLHYDELYRTGVTGNLRTG* |
Ga0114932_1000064622 | 3300009481 | Deep Subsurface | MRFAQGIKVQSDDAEALVELLVEWDAGQSRTDVMGYIGTRLLADRENPGTYMILAEFAEVDGDVSAAVEAERNNQRLETERWVTKLRELVAGEPDWIHFDEMYRTGITGNLRTG* |
Ga0115002_103423341 | 3300009706 | Marine | MKFEQSISFRCSDPDALVDLLVEWDKGQATTDVMGYIGPRLLANRDEPGHYMILAEFAEVDGDLTPAQEAERNNQREATQRWAAKLRSIVESEPEWIHFDELYRTGLTGNLRT |
Ga0131077_100961231 | 3300009873 | Wastewater | MRFCQSISVRCDDPDALVAHLVEWDEMQATSELMGYIGTRLLGDRDDPGHYLIVADFAEVDGDLPPAEEAERNNHREATQRWAEKLRSLLNSEPGWSHFDELYRTGLTGNLRTG* |
Ga0131077_102490112 | 3300009873 | Wastewater | MRFAQGIRVRCDEPDRLLQLLAEWDQGQATTEVMGYIGTRLLADRDDPGCYMILAEFAEVDGDLTPAEEAERNNQREETDRWAQKLRALVAGEPDWTHYDEMYRTGITGNLRTG* |
Ga0133547_102534563 | 3300010883 | Marine | MKFEQSISFRCSDPDALVDLLVEWDKGQATTDVMGYIGPRLLANRDEPGHYMILAEFAEVDGDLTPAQEAERNNQREAIQRWGAKLRAVVESEPEWIHFDELYRTGLAGNLRTG* |
Ga0137458_10834422 | 3300011436 | Soil | MRFTQGIRVKCADGKALVKLLLDYDKNQSSLDVMGFIGTRLLENRDQPGEFLILAEFAEVDGDLSAEEEAERNNQREETERWATNLRALVAEEPEWIHYHERYHTGITGNLRTE* |
Ga0164298_110319252 | 3300012955 | Soil | MRFAQGIRVRSEHPDDLVALLADWDRGQATGEVMGYIGTRLLADRDEPGCYLIIAEFAEVDGDLTPAAEAERNNRREETERWAQQLSALVDGEPEWTHYDE |
Ga0164301_118694941 | 3300012960 | Soil | MMRFAQGIRVRSEHPDDLVALLADCDRGQATGEVMGYIGTRLLADRDEPGCFLIIAEFAEVDGDLTPAAEAERNNRREETERWAQQLRALVDGEPEWTHYDELYRTGLTGNLRTG* |
Ga0164309_101940412 | 3300012984 | Soil | MRFTQGIRVRCTDPDALLQLLAEWDRSQATTDVMGYIGTRLLADRDDPGCYLIVADFAEVDGDLTPAEEAERNNQRAETERWAEKLRALVGGEPEWSHYDELYRTGITGNLRTG* |
Ga0164309_105033181 | 3300012984 | Soil | MRFAQGIRVRSEHPDDLVALLADWDRGQATGEVMGYIGTRLLADRDEPGCYLIIAEFAEVDGDLTPAAEAERNNRREETERWAQQLRALVDGEP |
Ga0164308_101587732 | 3300012985 | Soil | MRFAQGIRVRSEHPDDLVALLADWDRGQATGEVMGYIGTRLLADRDEPGCYLIIAEFAEVDGDLTPAAEAERNNRREETERWAQQLRALVDGEPEWTHYDELYRTGLTGNLRTG* |
Ga0164308_106923941 | 3300012985 | Soil | MRFTQGIRVRCTDPDALLQLLAEWDRSQATTDVMGYIGTRLLADRDDHGCYLMLADFAEVDGDLTPAEEAERNNQRAETERWAERLRALVGGEPEWSHYDELYRTGITGNLRTG* |
Ga0164308_107517152 | 3300012985 | Soil | MRFAQGIRVRCTDPEALMKLLVEWDEAQASTELMGYIGTRLLADRDDPGSYLMLADFSEVDGDLTPAEEAERNNQREETERWAQKLRQLIGGEPEWPHYDALDSTGTTGNQRTG* |
Ga0164307_102518882 | 3300012987 | Soil | MRFAQGIRVHCDDPDGLLALLADWDKRQATGEVMGYIGTRLLADRDEPGCFLIIAEFAEVDGDLTPAAEAERNNRREETEEWARQLRALVDGEPEWT |
Ga0164306_102849262 | 3300012988 | Soil | MRFTQGIRVRCTDPDALLQLLAEWDRSQATTDVMGYIGTRLLADRDDHGCYLILADFAEVDGDLTPAEEAERNNQRAETERWAERLRALVGGEPEWSHYDELYRTGITGNLRTG* |
Ga0172420_111138171 | 3300013233 | Marine | MKFEQSIVFECGDPDALIDLMIEWDAGQATSDVMGYIGTRLLSNRDNPGRYMILAEFAEVDGDLTPAEEAERNNQREATERWVAKLRALADAEPEWIHFDELYRTGLTGDLRTG* |
Ga0157375_131892482 | 3300013308 | Miscanthus Rhizosphere | MRFTQGIRVRCDDPDALLRLLVEWDEAQATTDVMGYIGTRLLADRDEPGRYLILAEFAEVDGDLTPAEEAERNNRREETERWAEQLRALVAGEPEWTHYDELYRTGVTGNLRTG* |
Ga0119887_10481772 | 3300013769 | Sewage Treatment Plant | MRFAQGITVRCDDPDGLARLLAEWDEGQASTDVMGYIGTRLLGDRDDPGCYLILAEFAEVDGELTPAEEAERNNQRAETERWVQKLRTLVGGEPEWRHYDELYRTGITGNLRTG* |
Ga0163161_109457811 | 3300017792 | Switchgrass Rhizosphere | CTDPDALLQLLVEWDRNQATTDVMGYIGTRLLADRDEQGCYLILADFAEVDGDLTPAEEAERNNQRAETARWAEKLRALVGGEPEWTHYDELYRTGITGNLRTG |
Ga0163161_111134952 | 3300017792 | Switchgrass Rhizosphere | MRFTQGIRVRCTDPDALLQLLAEWDRSQATTDVMGYIGTRLLADRDDHGCYLILADFAEVDGDLTPAEEAERNNQRAETERWAEKLRALVGGEPEWTHYDELYRTGI |
Ga0190272_133350012 | 3300018429 | Soil | TQGIRVHCTDPDSLIALLAGWDRNQATTDVMGYIGTRLLADRDDVDCYLILADFAEVDGDLTPAEEAERNNQREETERWVQALRELVGAEPEWSHFDELYRTGITGNLRTG |
Ga0190268_121467021 | 3300018466 | Soil | PMRFTQGIKVRCTDPDSLLALLAEWDRNQATTDVMGYIGTRLLKDRDDAGCYVILADFAEVDGHPTPAEEAERNNQREETARWAQKLRDLVGGEPEWAHYDELYRTGITGNLRTG |
Ga0190274_122699001 | 3300018476 | Soil | MRFTQGIRVRCDDPDALLRLLVEWDEAQATTDVMGYIGTRLLADRDEPGRYLILAEFAEVDGDLTPAEEAERNNQREETERWAQKLRALVDGEPEWAHYDELYRTGITGNLRTG |
Ga0190271_100738793 | 3300018481 | Soil | MRFAQGIRVRCGDPDGLLGLLAEWDRNQATTDVMGYIGTRLLADRDDPGCYLIVAEFAEVDGDLSPAEEAERNNHREETERWVQKLRALVDGEPDWFHYDELYRTGITGNLRTG |
Ga0190271_124206802 | 3300018481 | Soil | MRFNQGIGIKCGDADSIVALLAEWDRLRSTTDLTGYIGTRLLADRDRPGHFLILAEFAEVDGDLSAADEAELSNQLDETQRWADKLRSLVEGEPEWIH |
Ga0194023_11012912 | 3300019756 | Freshwater | RVRAADPDQLIELLAEWDRGQAADEIMGYIGTRLLADRDSPGDYMILAEFAEVDGDLTAAEEAERNNQRERTEAWARKLRELVEGEPEWVHYDEYYRTGLTGDLRTG |
Ga0213866_100002733 | 3300021425 | Seawater | MKFSQAIRVRAADPDQLIELLAEWDRGQAADEIMGYIGTRLLADRDSPGDYMILAEFAEVDGDLTAAEEAERNNQRERTEAWARKLRELVEGEPEWVHYDEYYRTGLTGDLRTG |
Ga0224497_101183801 | 3300022209 | Sediment | MKFAQGISIRCGDADALVRLLAEWDEGQASTDVMGYIGTRLLADRDDPGRYMILAEFAEVDGELTSVDEAESNNQREETERWAAKLRRLVEGEPEWIHFDELYRTGITGDLRTG |
Ga0224505_103191861 | 3300022214 | Sediment | MRFAQGIRVRCRDSEGLKRLLAEWDEGQASTEVMGYIGTRLLADRDEPYCYLILAEFAEVDGDLTPAAEALRNNQREETERWAEKLRSLVDDEPDWTHYDELYRTGITGNL |
Ga0224512_102192401 | 3300022226 | Sediment | VKFTQTISVRCGDERALAELLADWDHGQAATEVMGYIGTRLLADRDDPGHFLIVAEFAPVDGELSSADEAERNNQREETERWAERLRALVDGEPEWVHYDE |
Ga0224510_102894232 | 3300022309 | Sediment | MRFAQGIRVRCRDSEGLKRLLAEWDEGQASTEVMGYIGTRLLADRDEPYCYLILAEFAEVDGDLTPAAEAERNNQREETERWAEKLRSLVDDEPDWTHYDELYRTGITGNLRTG |
Ga0224508_101258151 | 3300022413 | Sediment | TQGIRIMCTDPEAIVELLAEWDEGQSQTEVMGYIGTRLLSDRDNPGSYMILAEFAEVDGDLTPAEEAERNNQRQETQRWADKLRALVEGEPEWIHFDEYYRTGLTGDLRTG |
Ga0224508_106168741 | 3300022413 | Sediment | MRFAQGIRIRCADPESLLELLAEWDVGQSKSEVMGYIGTRLLADRDRPGHYWILAEFAEVDGDLTAAAEAELNNQREETERWAEKLRTLVEGEPEWIHFDELYRTGITGNLRTR |
Ga0209992_1000076815 | 3300024344 | Deep Subsurface | MRFAQGIKVQSDDAEALVELLVEWDAGQSRTDVMGYIGTRLLADRENPGTYMILAEFAEVDGDVSAAVEAERNNQRLETERWVTKLRELVAGEPDWIHFDEMYRTGITGNLRTG |
Ga0244775_112449951 | 3300024346 | Estuarine | RVRCSDPEALVELLAEWDRGQATSDIMGYIGTRLLADRDHPGHYVILAEFAEVDGDVPAADEAERNNQRHETDRWAAKLRALVDDEPEWLHYDELYRTGVTGNLRTG |
(restricted) Ga0255046_100136811 | 3300024519 | Seawater | MKFAQGIRVRCSDPEALTELLAEWDKSQSATDVMGYIGNRLLADRDDTGHYLILAEFAEVDGDLTPAEEAERNNQRNETERWAAKLRSLVDGEPEWIHFDELYRTGITGNLRTG |
(restricted) Ga0255056_106320342 | 3300024521 | Seawater | RIRCSDPEALVELLAEWDQGQSTSELMGYIGTRLLADRDSPGRYMILSEFAEVDGDLTPAQEAERNNQREETERWAGKLRGLVEGEPEWVHFDELYHTGITGNLRTG |
Ga0209108_101138682 | 3300025165 | Soil | MKFAQGIRVRCDDPEGLIQLLAEWDRGQATTDVMGYIGTRLLAERDEPGRYLILAEFAEVEGDLTPAEEAERNNQREETERWAEKLRSLVDGEPDWIHYDELYRTGITGNLRSG |
Ga0209640_105918002 | 3300025324 | Soil | MRFAQGIRVRCDDPERLIELLAEWDQGQATTDVMGYIGTRLLAERDEPGRYLILAEFAEVDGDLTPAEEAERNNQREETERWAEKLRSLVDGEPDWIHYDELYRTGITGSLRSG |
Ga0207645_111867492 | 3300025907 | Miscanthus Rhizosphere | MRFTQSINFRCADQEALVALLAEWDEGQATTDVMGYIGTRLLRDRDDAGRYLILAEFAEVDGDLTPAEEAERNNQREATQRWAERLRALVGGDPEWAHFDELYRTGLTGN |
Ga0207648_107357812 | 3300026089 | Miscanthus Rhizosphere | MRFTQSINFRCADQEALVALLAEWDEGQATTDVMGYIGTRLLRDRDDAGRYLILAEFAEVDGDLTPAEEAERNNQREATQRWAERLRALVGGEPEWAHFDELYRTGLTGNLRTG |
Ga0214469_11453131 | 3300027636 | Soil | MRFAQGIRVRCDDPDGLVQLLAEWDEGQATTEVMGYIGTRLLADRDEPGCYLILADFAEVDGDLTPAEEAERNNQREATEHWAQKLRSLVDGEPDWVHYDEVYRTGITGSLRTG |
Ga0207421_100072167 | 3300027784 | Alkaline Sediment | MMKFEQGIWLKCSDPDALVQLLAAWDLDQAATHVMGYIGTRLLADRDKPGSYLILAEFAEADGDLTAAEEAERNNQREETDQWAQKLRALADGELTWTHYDELYRTGVTGDLRTG |
Ga0209013_100480535 | 3300027858 | Marine | MRFTQGMSVRCGDTDALVDLLAEWDQAHSTSEVVGYIGTRLLVDRDQPGCYMILADFAEVDGDLSPAEEAELNNQREETDRWVGKLRDLVEGEPEWNHYDEIYRTGITGNLRTG |
Ga0209013_101059162 | 3300027858 | Marine | MRFAQGIRVRSADPDSLMKLLSEWDAAQSKSEVMGYIGTKLLADRDRPGDYLIFADFAEVDGDLTAADEAERNNQREETERWAERLRTLVEGEPEWIHYDELYRTGITGNLRTR |
Ga0209813_100779522 | 3300027866 | Populus Endosphere | MRFTQGIRVRCANTDALIELLNDWDRRHATAEIIGYIGTRLLADRDDPGTFLILADFAEVDGDLTPAEEAERNNQREETERWVRDLRALVGAEPEWSHYDELYRTGITGNLRTG |
Ga0209068_100576792 | 3300027894 | Watersheds | MMRFAQGIRVRSDHRDELVALLADWDRSQATGEVMGYIGTRLLADRDDPGCFLIIAEFAEVDGDLTPAAEAERNNRREETERWAEQLRALVDGEPVWTHYDELYRTGLTGNLRTG |
Ga0210366_100388262 | 3300028420 | Estuarine | MRFTQGIRVRCGDADALVDLLAKWDQLQSATDVMGYIGTRLLADREQPDHFMILAEFAEVDGDLTAADEAERNNQRVETEQWATKLRSLVEGEPEWVHFDELYRTGITGNLRTG |
Ga0247823_102024322 | 3300028590 | Soil | MMRFDQGIRVTCGDPDGLVQLLAEWDAGQATSDLMGYIGTRLLADRDEPGCYLILAEFAEVDGDLTPAEEAERNNQRDETERWAQKLRAMVDGEPVWTHYDELYRTGITGNLRTG |
Ga0247823_102917121 | 3300028590 | Soil | MMRFEQGIRVSCGDPAGLVQLLAEWDAGQATSDLMGYIGTRLLADRDEPGCYLILAEFAEVDGDLTPAEEAERNNQREETERWAQKLRAMVDGEPVWTHYDELYRTGITGNLRTG |
Ga0247823_104754802 | 3300028590 | Soil | MMRFAQGIRVTCADPDGLVRLLAEWDATQATSEVMGYIGTRLLADRDEPGCYLILAEFAEVDGDLTPAEEAERNNQRDETERWAQKLREMVDGEPVWTHYDELYRTGITGNLRTG |
Ga0247823_107038761 | 3300028590 | Soil | MMRFEQGISVRCSDPDALVLLLAEWDAGQATSDVMGYIGTRLLADRDEPGSYLILAEFAEVDGDLTPAEEAERNNQREETARWAEKLRSLISGEPIWTHYDELYRTGITGNLRTG |
Ga0272441_104975661 | 3300028920 | Marine Sediment | MRFTQTIKVRCDDAEGLLQLLAEWDRSQATTDVMGYIGTRLLADRDDPGCYLIAADFAEVDGDLTPAEEAERNNQRAETERWAQKLRALVGGEPEWRHYDELYRTGITGNLRTG |
Ga0311365_111671832 | 3300029989 | Fen | VTRFAPGIRVRCNDPDGLVQLLVEWDQAQAMTDVMGYIGTRLLADRDEPGCYVILAEFAAVDGDLTPAEEAERNNQREETERWAEKLRALVDGEPDWIHYDELYRTGITGNLRTH |
Ga0268386_105020672 | 3300030619 | Soil | MRFAQGIRVRCDDPEGLVQLLAEWDEGQATTEVMGYIGTRLLADRDEPGCYMILAEFAEVDGDLTPAEEAERNNQREATERWAQKLRSLVDGEPDWVHYDEFYRTGITGSLRTG |
Ga0299914_103308102 | 3300031228 | Soil | MRFAQGIRVRCDDPDGLVQLLAEWDEGQATTEVMGYIGTRLLADRDEPGCYMILAEFAEVDGDLTPAEEAERNNQREATEHWAQKLRSLVDGEPDWVHYDEVYRTGITGSLRTG |
Ga0299913_105417062 | 3300031229 | Soil | MRFAQGIRVRCDDPDGLVQLLSEWDEGQATTEVMGYIGTRLLADRDEPGCYLILAEFAEVDGDLTPAEEAERNNQRAATERWAQKLRSLVDGEPDWVHYDEHYRTGITGSLRTG |
Ga0307506_102706032 | 3300031366 | Soil | MMRFAQGIRVRSEHPDGLVTLLADWDRGQATGEVMGYIGTRLLADRDEAGCYLIIAEFAEVDGDLTPAAEAERNNRREETERWAQQLRALVDGEPEWTHYDELYRTGLTGNLRTG |
Ga0307380_100153409 | 3300031539 | Soil | MRFAQGIRVRCDDSEALLGLLAEWDAAQSKSEVMGYIGTRLLADRDQPGEYLILAEFAEVDGDLSAADEAERNNQREETVRWAEKLRALVECEPEWVHYDELYRTGITGNLRTR |
Ga0307380_112899172 | 3300031539 | Soil | MRFSQEMRVRCSDPDALVELLTDWDRGQAASEIMGYIGTRLLANRDEPGAFVILSEFAEVEGDLTAVEEAERNNQREETERWVTRLRELVEGEPEWVHYDELYRTGVTGNLRTR |
Ga0307378_110715052 | 3300031566 | Soil | MKFCQAIRVRCDEPERLVDLLVDWDRAQAVDDVMGYIGTRLLADRDHPSSYMILAEFAEVDGDRTAAEEAELNNQRERTEEWARSLRELVDGEPEWVHYDEHYRTGITGDRRTG |
Ga0316575_104255972 | 3300031665 | Rhizosphere | MRFEQAISFHTDDPGAAIELLREWDEAQASTDVMGYVGTRLLADRDEPGRYLILAEFAEVDGDLTPAEEAERNNQREATQRWAEKLRAMADDEPSWAHFDELYRTGLTGNLRTG |
Ga0316579_100669912 | 3300031691 | Rhizosphere | MRFEQAISFHTDDPGAAIALLREWDVAQASTDVMGYVGTRLLADRDEPGRYLILAEFAEVDGDLTPAEEAERNNQREATQRWAEKLRAMADDEPSWAHFDELYRTGLTGNLRTG |
Ga0316579_102752552 | 3300031691 | Rhizosphere | MRFEQAIHFRCGDPDEVVALLQEWDVAQASTDVMGYVGTRLLADRDAPGHYLILAEFAEVDGDLTPAEEAERNNQREATQRWAEKLRAIVHGEPTWTHYDELYRTGLTGNLRTG |
Ga0311367_101078093 | 3300031918 | Fen | VTRFAQGIRVRCNDPDGLVQLLVEWDQAQAMTDVMGYIGTRLLADRDEPGCYVILAEFAEVDGDLTPAEEAERNNQREETERWAEKLRALVDGEPDWIHYDELYRTGITGNLRTH |
Ga0326597_112915852 | 3300031965 | Soil | MMRFTQGIRVRCADPDALQVLLAEWDAGQATTEVMGYIGTRLLADRDDPGSFMILAEFAEVDGDLTPAEEAERNNQREETERWAGKLRSLVEGEPEWTHWDELYRTGITGNLRTG |
Ga0315336_1000328117 | 3300032132 | Seawater | MRFAQTISVECSDPDALLALLAEWDAGQSRSEIMGYIGTRLLADRDTPGRYIILADFAEVDGDLTAADEAALNNQREETERWVTKLRELVDGEPDWIHYDELYRTGITGNLRTR |
Ga0315338_1000065224 | 3300032138 | Seawater | MRFAQRISVRCSDPDALLELLAEWDAGQSRSEIMGYIGTRLLADRDDPGAYMILAEFAEVDGDITAADEAAGNNQREETERWATKLRELVEGEPEWIHYDELYRTGITGNLRTR |
Ga0316580_100486751 | 3300032139 | Rhizosphere | LLREWDEAQASTDVMGYVGTRLLADRDEPGRYLILAEFAEVDGDLTPAEEAERNNQREATQRWAEKLRAMADDEPSWAHFDELYRTGLTGNLRTG |
Ga0316187_101544322 | 3300032231 | Worm Burrow | MRFTQGIRVQCSDPDSLMALLADWDLGQSKSEIMGYIGTKLLADRDRPGDYMILAEFAEVDGDLTAAEEAQRNNQREATERWAERLRALVDGEPDWIHFDELYHTGITGNIRTG |
Ga0316187_105771972 | 3300032231 | Worm Burrow | MKFTQTISVRCRDADALTALLAEWDQLQAATEIMGYIGTRLLADRDDPGHFVIVAEFAQVDADVPSADEAERNNQRAATEAWAGKLRDLVEGEPEWEHFDELYRTGVTGNLRTG |
Ga0316190_102824721 | 3300032259 | Worm Burrow | MKFTQTISVRCGDADALTALLAEWDQLQAATEIMGYIGTRLLADRDDPGHFVIVAEFAQVDADVPSADEAERNNQRAATEAWVGKLRDLVEGEPEWEHFDELYRTGVTGNLRTG |
Ga0316192_105980962 | 3300032260 | Worm Burrow | MALLADWDLGQSKSEIMGYIGTKLLADRDRPGDYMILAEFAEVDGDLTAAEEAQRNNQREATERWAERLRALVDGEPDWIHFDELYHTGITGNIRTG |
Ga0316195_101370252 | 3300032263 | Sediment | MRFTQSIRVQCGDADALARLLAEWDQLQSTTDVMGYIGTRLLADREQPGHFMILAEFAEVDGDVTAADEAERNNQRVETEQWATKLRALVEGEPEWVHFDELYRTGITGNLRTG |
Ga0316197_100092169 | 3300032273 | Sediment | MKFTQTISVRCGDADALTALLAEWDQLQANSELMGYIGTRLLADRDDRGHFLIVADFAQVDADVPSADEAERNNQRDATEAWASRLRDLVAGEPEWEHFDELYRTGVTGSLRTG |
Ga0316197_100149785 | 3300032273 | Sediment | VRCSDPEALVELLAEWDRGQATSDIMGYIGTRLLADRDRPGHYVILAEFAEVDGDVPAADEAERNNLRHETDRWAAKLRALVDDEPEWLHYDELYRTGVTGNLRTG |
Ga0316197_101179833 | 3300032273 | Sediment | MKFCQFIRVRSDQPDRLVDLLVEWDRAQAGDEVMGYIGTRLLADRDHPGSYLILAEFAEVDGDRTAAEEAEVNNQRERTEEWARALRELVDGEPEWVHYDEHYRTGITGDRRTG |
Ga0214472_104806572 | 3300033407 | Soil | VRFAQGIRIRCADPDAVVDLLAEWDEFQATTDVMGYIGTRLLADKDHPGSFLILAEFAEVDGELTAADEAARNNQREETERWATKLRSMVESEPEWIHFDELYRTGITGDLRTG |
Ga0316193_104920162 | 3300033429 | Sediment | MKFTQTISVRCGDADALTALLAEWDQLQANSELMGYIGTRLLADRDDRGHFLIVADFAQVDADVPSADEAERNNQRDATEAWANRLRDLVEGEPEWEHFDELYRTGVTGSLRTG |
Ga0373948_0004006_1998_2303 | 3300034817 | Rhizosphere Soil | PEALVTLLAEWDRGRATTDVTGYIGTRLLADRDQSGHYLILAEFAEVDGDLTPAQEAERNNQREDTDRWAQKLRALVDGEPDWIHYDELYRTGITGNLRTG |
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