Metagenome / Metatranscriptome Family F076351

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076351
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	49 residues
Representative Sequence	DGDLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVSSN
Number of Associated Samples	87
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.15 %
% of genes from short scaffolds (< 2000 bps)	89.83 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.254 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.492 % of family members)
Environment Ontology (ENVO)	Unclassified (38.983 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.102 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.38% β-sheet: 0.00% Coil/Unstructured: 71.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00691	OmpA	3.39
PF07769	PsiF_repeat	2.54
PF02927	CelD_N	1.69
PF02397	Bac_transf	1.69
PF00596	Aldolase_II	1.69
PF05697	Trigger_N	1.69
PF01850	PIN	1.69
PF07721	TPR_4	1.69
PF13505	OMP_b-brl	1.69
PF13447	Multi-haem_cyto	0.85
PF07883	Cupin_2	0.85
PF00575	S1	0.85
PF00884	Sulfatase	0.85
PF00326	Peptidase_S9	0.85
PF13411	MerR_1	0.85
PF03734	YkuD	0.85
PF00072	Response_reg	0.85
PF00582	Usp	0.85
PF04055	Radical_SAM	0.85
PF04075	F420H2_quin_red	0.85
PF06983	3-dmu-9_3-mt	0.85
PF07681	DoxX	0.85
PF13620	CarboxypepD_reg	0.85
PF13565	HTH_32	0.85
PF08818	DUF1801	0.85
PF02371	Transposase_20	0.85
PF01717	Meth_synt_2	0.85
PF04264	YceI	0.85
PF04389	Peptidase_M28	0.85
PF00005	ABC_tran	0.85
PF04203	Sortase	0.85
PF00248	Aldo_ket_red	0.85
PF01011	PQQ	0.85
PF01833	TIG	0.85
PF01695	IstB_IS21	0.85
PF01258	zf-dskA_traR	0.85
PF01594	AI-2E_transport	0.85
PF14534	DUF4440	0.85
PF02897	Peptidase_S9_N	0.85
PF13936	HTH_38	0.85
PF13683	rve_3	0.85
PF00484	Pro_CA	0.85
PF01914	MarC	0.85
PF13964	Kelch_6	0.85
PF00069	Pkinase	0.85
PF08241	Methyltransf_11	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.39
COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	Posttranslational modification, protein turnover, chaperones [O]	1.69
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	1.69
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.85
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.85
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.85
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.85
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.85
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.85
COG1770	Protease II	Amino acid transport and metabolism [E]	0.85
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.85
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.85
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.85
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.85
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.85
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.85
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.85
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.85
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.85
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.25 %
Unclassified	root	N/A	34.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.25 %
Unclassified	root	N/A	34.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.25 %
Unclassified	root	N/A	34.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.39 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.47 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.54 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.56 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.47 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.69 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.69 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.69 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.69 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.85 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.56 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.69 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.69 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.69 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.85 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.85 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.85 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.56 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.69 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.69 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.69 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.85 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.85 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.85 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.56 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.69 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.69 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.69 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.85 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.85 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	0.85 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.56 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.69 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.69 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.69 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	0.85 %
unclassified Flavobacterium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium	0.85 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.85 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.56 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.69 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.69 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.69 %
Stigmatella aurantiaca DW4/3-1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	0.85 %
Flavobacterium sp. F52	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp. F52	0.85 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.85 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16919585	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
2088090014\|GPIPI_17382645	All Organisms → cellular organisms → Bacteria	2692	Open in IMG/M
3300000955\|JGI1027J12803_100662392	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300000955\|JGI1027J12803_104744113	Not Available	586	Open in IMG/M
3300000955\|JGI1027J12803_108737240	Not Available	814	Open in IMG/M
3300003352\|JGI26345J50200_1029893	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300004082\|Ga0062384_100057475	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300004082\|Ga0062384_100756257	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005148\|Ga0066819_1000087	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300005163\|Ga0066823_10019860	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300005332\|Ga0066388_100843592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1503	Open in IMG/M
3300005538\|Ga0070731_10144535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1577	Open in IMG/M
3300005566\|Ga0066693_10171694	Not Available	824	Open in IMG/M
3300005614\|Ga0068856_100495187	Not Available	1243	Open in IMG/M
3300005764\|Ga0066903_109103504	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300006050\|Ga0075028_101032122	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006175\|Ga0070712_100224458	Not Available	1489	Open in IMG/M
3300006176\|Ga0070765_100442560	All Organisms → cellular organisms → Bacteria → Acidobacteria	1217	Open in IMG/M
3300006176\|Ga0070765_101214969	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300006806\|Ga0079220_11024010	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp. F52	658	Open in IMG/M
3300006904\|Ga0075424_102882430	Not Available	500	Open in IMG/M
3300009177\|Ga0105248_13299109	Not Available	513	Open in IMG/M
3300010043\|Ga0126380_10372411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300010043\|Ga0126380_11358109	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300010048\|Ga0126373_11252850	Not Available	808	Open in IMG/M
3300010048\|Ga0126373_11482133	Not Available	744	Open in IMG/M
3300010048\|Ga0126373_11835606	Not Available	669	Open in IMG/M
3300010048\|Ga0126373_12921503	Not Available	533	Open in IMG/M
3300010343\|Ga0074044_10227742	All Organisms → cellular organisms → Bacteria → Acidobacteria	1234	Open in IMG/M
3300010358\|Ga0126370_10387712	Not Available	1143	Open in IMG/M
3300010358\|Ga0126370_11961496	Not Available	571	Open in IMG/M
3300010360\|Ga0126372_10403994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1248	Open in IMG/M
3300010361\|Ga0126378_11112438	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300010361\|Ga0126378_12000986	Not Available	660	Open in IMG/M
3300010361\|Ga0126378_13253210	Not Available	516	Open in IMG/M
3300010366\|Ga0126379_10274621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1675	Open in IMG/M
3300010366\|Ga0126379_11353737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300010376\|Ga0126381_100816907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1339	Open in IMG/M
3300010376\|Ga0126381_101830320	Not Available	876	Open in IMG/M
3300010376\|Ga0126381_103375601	Not Available	629	Open in IMG/M
3300010376\|Ga0126381_105026185	Not Available	507	Open in IMG/M
3300010398\|Ga0126383_13491425	Not Available	513	Open in IMG/M
3300012210\|Ga0137378_10597312	Not Available	1014	Open in IMG/M
3300012922\|Ga0137394_10323403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1317	Open in IMG/M
3300012971\|Ga0126369_10835906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300012971\|Ga0126369_10857450	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300012971\|Ga0126369_11488256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	767	Open in IMG/M
3300012987\|Ga0164307_11195282	Not Available	630	Open in IMG/M
3300012989\|Ga0164305_11420072	Not Available	612	Open in IMG/M
3300015373\|Ga0132257_100418142	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300016294\|Ga0182041_10238339	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300016294\|Ga0182041_10926374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300016319\|Ga0182033_11760149	Not Available	562	Open in IMG/M
3300016341\|Ga0182035_10240973	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300016371\|Ga0182034_10009968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5281	Open in IMG/M
3300016371\|Ga0182034_11591571	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300016371\|Ga0182034_11889348	Not Available	527	Open in IMG/M
3300016387\|Ga0182040_10726500	Not Available	814	Open in IMG/M
3300016404\|Ga0182037_10053017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2720	Open in IMG/M
3300016422\|Ga0182039_11044064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	734	Open in IMG/M
3300016750\|Ga0181505_11089670	All Organisms → cellular organisms → Bacteria → Acidobacteria	2009	Open in IMG/M
3300017932\|Ga0187814_10223395	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300017966\|Ga0187776_10735761	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300017970\|Ga0187783_10231320	Not Available	1354	Open in IMG/M
3300017974\|Ga0187777_10143953	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300017975\|Ga0187782_10765888	Not Available	746	Open in IMG/M
3300017975\|Ga0187782_11614540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300017994\|Ga0187822_10211081	Not Available	652	Open in IMG/M
3300017995\|Ga0187816_10027713	All Organisms → cellular organisms → Bacteria → Acidobacteria	2276	Open in IMG/M
3300017995\|Ga0187816_10051763	All Organisms → cellular organisms → Bacteria	1716	Open in IMG/M
3300018085\|Ga0187772_10006567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6070	Open in IMG/M
3300020579\|Ga0210407_11474836	Not Available	502	Open in IMG/M
3300020583\|Ga0210401_11316693	Not Available	580	Open in IMG/M
3300021168\|Ga0210406_10353721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300021420\|Ga0210394_10782494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	834	Open in IMG/M
3300021432\|Ga0210384_10145117	All Organisms → cellular organisms → Bacteria → Proteobacteria	2130	Open in IMG/M
3300021475\|Ga0210392_10327370	All Organisms → cellular organisms → Bacteria → Acidobacteria	1104	Open in IMG/M
3300021560\|Ga0126371_12134817	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300022523\|Ga0242663_1010864	All Organisms → cellular organisms → Bacteria → Acidobacteria	1222	Open in IMG/M
3300025922\|Ga0207646_10369565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300025929\|Ga0207664_10376579	Not Available	1259	Open in IMG/M
3300025939\|Ga0207665_10199851	All Organisms → cellular organisms → Bacteria → Proteobacteria	1456	Open in IMG/M
3300025941\|Ga0207711_12094360	Not Available	508	Open in IMG/M
3300026377\|Ga0257171_1057731	Not Available	675	Open in IMG/M
3300027545\|Ga0209008_1134263	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300027729\|Ga0209248_10150976	Not Available	693	Open in IMG/M
3300027842\|Ga0209580_10609169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300028906\|Ga0308309_10873168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300031057\|Ga0170834_100347083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	690	Open in IMG/M
3300031057\|Ga0170834_108000761	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300031122\|Ga0170822_11788794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	627	Open in IMG/M
3300031572\|Ga0318515_10791740	Not Available	500	Open in IMG/M
3300031718\|Ga0307474_10123287	All Organisms → cellular organisms → Bacteria → Acidobacteria	1946	Open in IMG/M
3300031736\|Ga0318501_10096429	All Organisms → cellular organisms → Bacteria → Acidobacteria	1469	Open in IMG/M
3300031744\|Ga0306918_11226607	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300031754\|Ga0307475_10189546	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300031823\|Ga0307478_10030833	All Organisms → cellular organisms → Bacteria	3865	Open in IMG/M
3300031833\|Ga0310917_10684982	Not Available	695	Open in IMG/M
3300031910\|Ga0306923_12329580	Not Available	533	Open in IMG/M
3300031912\|Ga0306921_10511021	Not Available	1396	Open in IMG/M
3300031912\|Ga0306921_12339780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300031946\|Ga0310910_11008610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	650	Open in IMG/M
3300031947\|Ga0310909_10636479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	889	Open in IMG/M
3300031947\|Ga0310909_11563183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	524	Open in IMG/M
3300031962\|Ga0307479_10692326	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	998	Open in IMG/M
3300031962\|Ga0307479_10864798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	878	Open in IMG/M
3300032001\|Ga0306922_12396136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300032174\|Ga0307470_11573485	Not Available	549	Open in IMG/M
3300032180\|Ga0307471_100231705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1882	Open in IMG/M
3300032180\|Ga0307471_101193768	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300032180\|Ga0307471_102068907	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	715	Open in IMG/M
3300032261\|Ga0306920_101691412	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300032261\|Ga0306920_102762936	Not Available	669	Open in IMG/M
3300032782\|Ga0335082_11235502	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300032783\|Ga0335079_10092300	All Organisms → cellular organisms → Bacteria	3434	Open in IMG/M
3300032828\|Ga0335080_10752401	Not Available	1011	Open in IMG/M
3300033158\|Ga0335077_10056418	All Organisms → cellular organisms → Bacteria	4754	Open in IMG/M
3300033158\|Ga0335077_11169160	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.76%
Host-Associated	Host-Associated	4.24%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.29%
Aquatic	Environmental → Aquatic	8.47%
Plants	Host-Associated → Plants	4.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.29%
Freshwater	Environmental → Aquatic → Freshwater	7.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.69%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.17%
Loam	Environmental → Terrestrial → Soil → Loam	8.47%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.24%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.08%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.08%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.24%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003352	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01361790	2088090014	Soil	KSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKAPSN
GPIPI_03396370	2088090014	Soil	KPDGDLVWNGVSKSFNPXXXXXXXXXXXXXVPKQMEKDGLLPKKAPSN
JGI1027J12803_1006623921	3300000955	Soil	GDLVWTGVSESFNPKSAEKVVDGLVKEVPKQMEKDGLLAKKPK*
JGI1027J12803_1047441132	3300000955	Soil	LVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVPSN*
JGI1027J12803_1087372403	3300000955	Soil	DGDLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKIAPSN*
JGI26345J50200_10298932	3300003352	Bog Forest Soil	IETNVYATSKPDGDLVWNGVSKSFNPKSAKKVADGLVKEVPKQMEKDGLLPKEVSAK*
Ga0062384_1000574752	3300004082	Bog Forest Soil	GDLVWTGISDSFNPKSAKKVADGLVKEVPKQMEKDGLLPKNSTSKERP*
Ga0062384_1007562572	3300004082	Bog Forest Soil	LVWNGRSQSFNPKSAKKVADGLVKELPKQMEKDGLLPKKASSN*
Ga0066819_10000872	3300005148	Soil	MAYDPGYTREDTTVSVETNVYATSKPDGDLVWNGVSESFNPKSAKKVAEGLVKEVPKRMEKDGLLPKKVPSN*
Ga0066823_100198601	3300005163	Soil	DGDLVWNGVSKSFNPKSAKKVAEGLIKELPKQMEKDGLLPAKASSN*
Ga0066388_1008435921	3300005332	Tropical Forest Soil	PDGDLVWNGVSKSFNPKSAKKVVDGLVKEVPKQMEKDGLLPKKVPSN*
Ga0070731_101445353	3300005538	Surface Soil	TVSVETNVYATSKPDGDLVWTGVSNSFNPKSAQKVADGLVKVVPKQMEKDGLLGKRPAPN
Ga0066693_101716942	3300005566	Soil	ATSKPDGDLVWTGVSESFNPKSAKKVADGLVREVPKRMEKDGLLPKKPSPN*
Ga0068856_1004951872	3300005614	Corn Rhizosphere	RVETNVYATSPPNGDLVWTGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLPKGTASD*
Ga0066903_1091035042	3300005764	Tropical Forest Soil	TDVTVSVETNFYSTSKPDGDLVWTAASDSFNPKSAKKVADGLVKEIPKQMEKDGLLPKSLAAK*
Ga0075028_1010321222	3300006050	Watersheds	DLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKAS*
Ga0070712_1002244581	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TSKPDGDLMWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDRLLPKRV*
Ga0070765_1004425603	3300006176	Soil	DGDLVWNGVSKSFNPKSAKKVADGLVKEVPKQMEKDGLLPKKVSN*
Ga0070765_1012149693	3300006176	Soil	GDLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVSSN*
Ga0079220_110240101	3300006806	Agricultural Soil	YEREDTTVSVETNVYATGKPDGDLVWTGVSESFNPKSAKKVADGLVREVPKQMEKDGLLPKKPSPK*
Ga0075424_1028824302	3300006904	Populus Rhizosphere	KPDGDLVWTGVSNSFNPKTAKKVADGLVKEIPKQMERDGLLPKNSALN*
Ga0105248_132991092	3300009177	Switchgrass Rhizosphere	ETNVYATSKPDGDLVWNGVSKSFNPKSAKKVVGGLVKEVPKQMEKDGLLPKKAPSN*
Ga0126380_103724111	3300010043	Tropical Forest Soil	DGDLVWTGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLPKSE*
Ga0126380_113581092	3300010043	Tropical Forest Soil	PDGDLVWTGVSNSFNPKSAKKVADGLVKEIPKRMESDGLLPKNSALN*
Ga0126373_112528501	3300010048	Tropical Forest Soil	TSKPDGDLVWNGVSKSFNPKSAKKVADGLVKEVPKQMEKDGLLPKRVSSK*
Ga0126373_114821331	3300010048	Tropical Forest Soil	ITVSVETNVYATDKPDGDLVWTGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLPKAK*
Ga0126373_118356061	3300010048	Tropical Forest Soil	KPDGDLVWTGTSESFNPKSAKKVADGLVKEVPRQMEKDGLLPRTPPSK*
Ga0126373_129215032	3300010048	Tropical Forest Soil	QREDITVSVETNVYATDKPDGDLVWTGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLSKAK*
Ga0074044_102277421	3300010343	Bog Forest Soil	DSFDPKSAKKVADGLVKEVPKQMEKDGLLPKKYTSPS*
Ga0126370_103877121	3300010358	Tropical Forest Soil	TNVYSTSKPDGDLVWTGVSDSFNPKSAKKVADGLVKEIPKRMESDGLLPKNSASK*
Ga0126370_119614961	3300010358	Tropical Forest Soil	DLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVSSN*
Ga0126372_104039942	3300010360	Tropical Forest Soil	GDLVWTGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLPKAK*
Ga0126378_111124381	3300010361	Tropical Forest Soil	LVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVSSN*
Ga0126378_120009862	3300010361	Tropical Forest Soil	GDLVWTGTSESFNPKSAKKVADGLVKEVPRQMEKDGLLPRTPPSK*
Ga0126378_132532102	3300010361	Tropical Forest Soil	REDTKVVVETNVYATSDLDGDLVWSATSESFNPKSAKKVADGLVREVPKQMTKDGLLPDKPSSD*
Ga0126379_102746211	3300010366	Tropical Forest Soil	KPDGDLVWTGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLPKSE*
Ga0126379_113537372	3300010366	Tropical Forest Soil	GYTREDTTVTVETNVYSTSKPDGDLVWTGVSDSFNPKSAKKVADGLVKEIPKRMESDGLLPKNSASK*
Ga0126381_1008169073	3300010376	Tropical Forest Soil	DLVWTGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLPKSE*
Ga0126381_1018303202	3300010376	Tropical Forest Soil	GVSKSFNPKSAKKVADGLVKEVPKQMEKDGLLPKRVSSK*
Ga0126381_1033756012	3300010376	Tropical Forest Soil	TGTSESFNPKSAKKVADGLVKEVPKQMEKDGLLPRTPPSK*
Ga0126381_1050261851	3300010376	Tropical Forest Soil	TAVSDSFNPKSAKKVADALVKEIPKRMEKDGLLQKQSSS*
Ga0126383_134914251	3300010398	Tropical Forest Soil	ATSKPDGDLVWNGVSKSFNPKSAKKVVDGLVKEVPKQMEKDGLLPKKVPSN*
Ga0137378_105973121	3300012210	Vadose Zone Soil	SVETNVYSTSKSDGDLVWTGVSDSFNPKSAKTVADSLVKVVPKQMEKDGLLPKNSATN*
Ga0137394_103234031	3300012922	Vadose Zone Soil	GVSNSFNPKSAKRVADGLVKEVPKQMESDGLLPRKVLSN*
Ga0126369_108359061	3300012971	Tropical Forest Soil	LVWTGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLPKSE*
Ga0126369_108574502	3300012971	Tropical Forest Soil	VWTGVSNSFNPKSVKKVADSLVKEVPKQMEKDGLLPKAK*
Ga0126369_114882561	3300012971	Tropical Forest Soil	SKPDGDLVWTASSQSFNPKSAKKVADGLIKELPKQMEKDGLLTKKPDSD*
Ga0164307_111952821	3300012987	Soil	TNVYATRQPDGDLVWTGVSNSFNPKSAKKVADGLVKEVPKQMEKDGLLPKSVVSN*
Ga0164305_114200721	3300012989	Soil	DGDLVWTGVSNSFNPKSAKKVADGLVKEVPKQMEKDGLLPKSVVSN*
Ga0132257_1004181423	3300015373	Arabidopsis Rhizosphere	SFNPKSAKKIADGLVKEVPKQMEKDGLLPKKAASN*
Ga0182041_102383393	3300016294	Soil	SESFNPKSAKKVVAGLVKEVPRQMEKDGLLKVVPSN
Ga0182041_109263741	3300016294	Soil	TNVYATSKPEGDLVWTGASESFNPKSAKKVADGLIKELPKQMEKDGLLEKKPDSN
Ga0182033_117601491	3300016319	Soil	VSESFNPKSAKKVVAGLVKEVPRQMEKDGLLKVVPSN
Ga0182035_102409733	3300016341	Soil	LVWTAVSDSFNPKSAKKVADGLVKEVPKQMEKDGLLPKSN
Ga0182034_100099686	3300016371	Soil	TGSSKSFNPKSAKKVAEGLVKEVPKQMEKDGLLSKKPQ
Ga0182034_115915711	3300016371	Soil	TVSVETNVYATSKPDGDLVWTGASESFNPKSAKKVADGLVKEVPKQMEKDGLLPKSPSSN
Ga0182034_118893481	3300016371	Soil	NVYATSKPDGELVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVPSHQ
Ga0182040_107265002	3300016387	Soil	VSVETNVYATSKPDGDLVWTGVSDSFNPKSVKKVADGLVKVVPKQMEKDGLLPKNSSSN
Ga0182037_100530171	3300016404	Soil	NSFNPKSAKKVADGLVKEVPKQMENDGLLPKNPSSN
Ga0182039_110440641	3300016422	Soil	TGVSESFNPKSAKKVADGLVKDLPKQMVKDGLLSKSPAST
Ga0181505_110896701	3300016750	Peatland	VYATSKPDGDLVWTGVSKSFNPKSANKVADGLVKEVPKQMEKDGLLPKNSTSN
Ga0187814_102233952	3300017932	Freshwater Sediment	YATSKPDGDLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVPSN
Ga0187776_107357611	3300017966	Tropical Peatland	GFEREDTTVSVETNVYATIKPDGDLVWTGVSESFNPKSAKKVADDLVKEVPKQMEKDGLLPKNSSSN
Ga0187783_102313203	3300017970	Tropical Peatland	DGDLVWTGVSDSFNPKSARKVADGLVKEIPKQMEKDGLLPKPASDERP
Ga0187777_101439531	3300017974	Tropical Peatland	TVSVETNVYATSKPDGDLVWTGVSNSFNPKSAKKVADGLVKEVPKQMEKDGLLPKNPSSN
Ga0187782_107658881	3300017975	Tropical Peatland	SKPDGDLVWTGASESFNPKSAKKVADGLVKEVPKQMERDGLLPRKPNSN
Ga0187782_116145401	3300017975	Tropical Peatland	SVETNVYSTSKPDGDLVWTGVSDSFNPKSARKVADGLVKQIPKQMEKDGLLPKTASN
Ga0187822_102110812	3300017994	Freshwater Sediment	LVWNGVTNSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVSSN
Ga0187816_100277131	3300017995	Freshwater Sediment	NVYGTSKPDGDLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDELLPKKVSSN
Ga0187816_100517631	3300017995	Freshwater Sediment	GDLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVPSN
Ga0187772_100065671	3300018085	Tropical Peatland	GVSDSFNPKSAKKVADGLVKEVPKQMEKDGLLPKNSSPD
Ga0210407_114748361	3300020579	Soil	KPDGDLVWTGVSDSFNPKSAKKVADGLVKEVPKQMEKDGLLPKSSASNSRPQPFLSC
Ga0210401_113166932	3300020583	Soil	GVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVSSN
Ga0210406_103537211	3300021168	Soil	DGDLVWTGVSDSFNPKSAKKVADGLVKEVPKQMEKDGLLPKSSASNSRPQPFLSC
Ga0210394_107824942	3300021420	Soil	TNVYATSKPDGDLVWNGVSKSFNPKSAKKVADGLVKEVPKQMEKDGLLPKKVSSN
Ga0210384_101451175	3300021432	Soil	NVYSTSKPDGDLVWTGVSNSFNPKSAEKVADGLVNVIPKQMEKDGLLAKKPASN
Ga0210392_103273703	3300021475	Soil	YATSAPDGELVWTGVSDSFNPKSAKKVADDLVKLVPKQMEKDGLLPKNSGTN
Ga0126371_121348171	3300021560	Tropical Forest Soil	VYATTKPDGDLVWTAVSDSFNPKSAKKVADALVKEIPKRMEKDGLLQKQSSS
Ga0242663_10108641	3300022523	Soil	VYSTSKPDGDLVWTGVSNSFNPKSAEKVADGLVNVIPKQMEKDGLLAKKPASN
Ga0207646_103695651	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TNVYATSKPDGDLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKAPSN
Ga0207664_103765793	3300025929	Agricultural Soil	NSFNPKSAKKVADGLVKEVPKQMEKDGLLPKSVVSN
Ga0207665_101998511	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TSKPDGDLVWNGVSKSFNPKSAKKVVGGLVKEVPKQMEKDGLLPKKVPSNE
Ga0207711_120943602	3300025941	Switchgrass Rhizosphere	TNVYATSKPDGDLVWNGVSKSFNPKSAKKVVGGLVKEVPKQMEKDGLLPKKAPSN
Ga0257171_10577312	3300026377	Soil	VSKSFNPKSAKKVADGLVKEVPKQMEKDGLLPKKVSAN
Ga0209008_11342631	3300027545	Forest Soil	GELVWTGISDSFDPKSAKKVADGLVKEVPKQMEKDGLLPKKSTSRS
Ga0209248_101509762	3300027729	Bog Forest Soil	KPDGDLVWNGVSKSFNPKSAKKVADGLVKEVPKQMEKDGLLPKEVSAK
Ga0209580_106091691	3300027842	Surface Soil	VWNGVSKSFNPKSAKKIVDGLVKEVPKQMEKDGLLLEKARSD
Ga0308309_108731682	3300028906	Soil	GDLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVSSN
Ga0170834_1003470832	3300031057	Forest Soil	GDLVWNGVSKSFNPKSAKKIADGLVKEVPKLMEKDGLLPKKVPST
Ga0170834_1080007612	3300031057	Forest Soil	YTREDTTVSIETNVYATGQPDGDLVWTGASDSFNPKSAKKVADCLVKEVPKRMEKDGLLAKDSAPN
Ga0170822_117887941	3300031122	Forest Soil	SKPDGDLVWNGVSKSFNPKSAKKIADGLVKEVPKLMEKDGLLPKKVPST
Ga0318515_107917401	3300031572	Soil	VWTGSSKSFNPKSAKKVAEGLVKEVPKQMEKDGLLSKKPQ
Ga0307474_101232874	3300031718	Hardwood Forest Soil	VYATSKPDGDLVWTGVSNSFNPKSAEKVADGLVKVVPKQMEKDGLLAKKPASN
Ga0318501_100964291	3300031736	Soil	VWNGVSESFNPKSAKKVVDGLVKEVPKQMEKDGLLPKKAPSS
Ga0306918_112266071	3300031744	Soil	YEREDITVSVETNVYATDKPDGDLVWTGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLPKAK
Ga0307475_101895463	3300031754	Hardwood Forest Soil	DGDLVWNGVSKSFNPKSAKKIADGLVKEVPKQMEKDGLLPKKVSSN
Ga0307478_100308337	3300031823	Hardwood Forest Soil	YATSKPDGDLVWTGVSNSFNPKSAEKVADGLVNVIPKQMEKDSLLAKKPASN
Ga0310917_106849822	3300031833	Soil	DLVWTGSSKSFNPKSAKKVAEGLVKEVPKQMEKDGLLSKKPQ
Ga0306923_123295801	3300031910	Soil	LVWTGASESFNPKSAKKVADGLIKELPKQMEKDGLLEKKPDSN
Ga0306921_105110212	3300031912	Soil	TVSIETNVYSTSKPDGDLVWTATSDSFNPKSAKKVADGLVKEIPKQMEKDGLLPKNPSGS
Ga0306921_123397801	3300031912	Soil	ATSKPDGDLVWTGTSESFNPKSAKKVADGLVKEVPKQMEKDGLLPRRPPSK
Ga0310910_110086101	3300031946	Soil	ATDKPDGDLVWTGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLPKAK
Ga0310909_106364792	3300031947	Soil	TGVSDSFNPKSAKKVADSLVKEVPKQMEKDGLLPKAK
Ga0310909_115631832	3300031947	Soil	VSVETNVYATSKPDGDLVWTAVSNSFNPKSAKKVADGLVKEVPKQMENDGLLPKNPSSN
Ga0307479_106923261	3300031962	Hardwood Forest Soil	GDLVWNGVSKSFNPKSAKKIADGLVKEVPKRMEKDGLLPKKVPAN
Ga0307479_108647982	3300031962	Hardwood Forest Soil	TNVYATDNPDGDLVWNGVSKSFNPKSAKKIADGLVKEVPKQMENDGLLPRKVPSN
Ga0306922_123961362	3300032001	Soil	DGDLVWTGTSESFNPKSAKKVADGLVKEVPKQMEKDGLLPRRSPSK
Ga0307470_115734851	3300032174	Hardwood Forest Soil	PDGDLVWNGVSKSFNPKSAKKVVGGLVKEVPKQMEKDGLLPKKVPTN
Ga0307471_1002317051	3300032180	Hardwood Forest Soil	VETNVYATGKPDGDLVWNGVSKSFNPKSAKKVADGLVKEVPKQMESDGLLPRKVPSN
Ga0307471_1011937682	3300032180	Hardwood Forest Soil	VYATSKADGDLVWTGVSESFNPKSAEKVVDGLVKEVPKQMEKDGLLAKKTK
Ga0307471_1020689072	3300032180	Hardwood Forest Soil	KSFNPKSAKKVADGLVKEVPKLMEKDGLLPKKVPST
Ga0306920_1016914121	3300032261	Soil	DVTVSVETNVYATSKPDGDLVWTGVSDSFNPKSAKKVADGLVKEVPKQMEKDGLLPPNPASN
Ga0306920_1027629361	3300032261	Soil	WTAASDSFNPKSAKKVADGLVKEIPKRMEKDGLLPKKAED
Ga0335082_112355021	3300032782	Soil	GDLVWTGVSQSFNPKSAKKVADGLIKELPKQMEKDGLLSKRPASS
Ga0335079_100923001	3300032783	Soil	DLVWTGLSKSFNPKSAKKVADGLIKELPKLMEKDGLLPKKAS
Ga0335080_107524011	3300032828	Soil	ETNVYATSKPDGELVWTGLSKSFNPKSAKKVADGLIKELPKQMEKDGLLPKKPS
Ga0335077_100564181	3300033158	Soil	SNSFNPKSAKKVADGLVKEVPKQMEKDGLLPKNPSSN
Ga0335077_111691601	3300033158	Soil	EDITVRVETNVYATSKPDGDLVWTGVSDSFNPKSAKKVADGLVKEIPKRMEKDGLLPKKSSSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076351

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences