Metagenome / Metatranscriptome Family F076405

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076405
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	59 residues
Representative Sequence	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSDRSLEKIGDVEMPRLAQVPSGLLS
Number of Associated Samples	95
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.81 %
% of genes near scaffold ends (potentially truncated)	25.42 %
% of genes from short scaffolds (< 2000 bps)	79.66 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (58.475 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.186 % of family members)
Environment Ontology (ENVO)	Unclassified (23.729 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.339 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.77% β-sheet: 0.00% Coil/Unstructured: 60.23%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01548	DEDD_Tnp_IS110	3.39
PF00072	Response_reg	2.54
PF00196	GerE	1.69
PF13545	HTH_Crp_2	1.69
PF00589	Phage_integrase	1.69
PF07730	HisKA_3	1.69
PF04185	Phosphoesterase	1.69
PF13408	Zn_ribbon_recom	0.85
PF13088	BNR_2	0.85
PF05532	CsbD	0.85
PF01555	N6_N4_Mtase	0.85
PF13548	DUF4126	0.85
PF03551	PadR	0.85
PF06764	DUF1223	0.85
PF07228	SpoIIE	0.85
PF05598	DUF772	0.85
PF13302	Acetyltransf_3	0.85
PF05050	Methyltransf_21	0.85
PF04986	Y2_Tnp	0.85
PF11154	DUF2934	0.85
PF10531	SLBB	0.85
PF13177	DNA_pol3_delta2	0.85
PF01740	STAS	0.85
PF04203	Sortase	0.85
PF05227	CHASE3	0.85
PF00144	Beta-lactamase	0.85
PF13560	HTH_31	0.85
PF07883	Cupin_2	0.85
PF13231	PMT_2	0.85
PF13205	Big_5	0.85
PF04397	LytTR	0.85
PF11999	Ice_binding	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	3.39
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.69
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.69
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.69
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.69
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.69
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.85
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.85
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.85
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.85
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.85
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.85
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.85
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.85
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.85
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.47 %
Unclassified	root	N/A	41.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.47 %
Unclassified	root	N/A	41.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.47 %
Unclassified	root	N/A	41.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.02 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.32 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.85 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.78 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	2.54 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.85 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.17 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2.54 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.69 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.85 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.85 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.17 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2.54 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.69 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.17 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2.54 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.69 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.85 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101262131	Not Available	744	Open in IMG/M
3300001593\|JGI12635J15846_10321405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	960	Open in IMG/M
3300002245\|JGIcombinedJ26739_100272977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1577	Open in IMG/M
3300004091\|Ga0062387_101575206	Not Available	529	Open in IMG/M
3300004152\|Ga0062386_101424395	Not Available	577	Open in IMG/M
3300005542\|Ga0070732_10247428	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005602\|Ga0070762_10501717	Not Available	795	Open in IMG/M
3300005712\|Ga0070764_10975345	Not Available	533	Open in IMG/M
3300005921\|Ga0070766_11134632	Not Available	540	Open in IMG/M
3300005944\|Ga0066788_10017870	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300005944\|Ga0066788_10179974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300005950\|Ga0066787_10029857	All Organisms → cellular organisms → Bacteria → Acidobacteria	979	Open in IMG/M
3300005995\|Ga0066790_10409293	Not Available	580	Open in IMG/M
3300005995\|Ga0066790_10412686	Not Available	577	Open in IMG/M
3300005995\|Ga0066790_10514886	Not Available	511	Open in IMG/M
3300006052\|Ga0075029_100110696	All Organisms → cellular organisms → Bacteria → Acidobacteria	1657	Open in IMG/M
3300006059\|Ga0075017_100329256	All Organisms → cellular organisms → Bacteria → Acidobacteria	1134	Open in IMG/M
3300006059\|Ga0075017_101259444	Not Available	580	Open in IMG/M
3300006102\|Ga0075015_100234411	All Organisms → cellular organisms → Bacteria → Acidobacteria	989	Open in IMG/M
3300006173\|Ga0070716_101007899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300006175\|Ga0070712_100541202	Not Available	980	Open in IMG/M
3300006642\|Ga0075521_10581927	Not Available	551	Open in IMG/M
3300009522\|Ga0116218_1343839	Not Available	667	Open in IMG/M
3300009665\|Ga0116135_1065304	Not Available	1280	Open in IMG/M
3300009700\|Ga0116217_10109263	All Organisms → cellular organisms → Bacteria	1884	Open in IMG/M
3300010379\|Ga0136449_100311348	All Organisms → cellular organisms → Bacteria	2861	Open in IMG/M
3300010379\|Ga0136449_100622906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1832	Open in IMG/M
3300011120\|Ga0150983_13218584	Not Available	638	Open in IMG/M
3300011120\|Ga0150983_15486882	Not Available	693	Open in IMG/M
3300011120\|Ga0150983_16410021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1975	Open in IMG/M
3300012208\|Ga0137376_10841958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	789	Open in IMG/M
3300012957\|Ga0164303_10139241	Not Available	1267	Open in IMG/M
3300012984\|Ga0164309_10405505	Not Available	1018	Open in IMG/M
3300012986\|Ga0164304_11039892	Not Available	651	Open in IMG/M
3300012988\|Ga0164306_11009785	Not Available	686	Open in IMG/M
3300012989\|Ga0164305_12085100	Not Available	519	Open in IMG/M
3300014169\|Ga0181531_10778496	Not Available	596	Open in IMG/M
3300014201\|Ga0181537_10220325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1304	Open in IMG/M
3300014495\|Ga0182015_10000564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	53226	Open in IMG/M
3300014498\|Ga0182019_10335099	Not Available	1017	Open in IMG/M
3300014501\|Ga0182024_10109498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3989	Open in IMG/M
3300014501\|Ga0182024_10461152	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300014501\|Ga0182024_10715074	Not Available	1234	Open in IMG/M
3300015082\|Ga0167662_1022024	Not Available	814	Open in IMG/M
3300017946\|Ga0187879_10069680	Not Available	2044	Open in IMG/M
3300018008\|Ga0187888_1027272	All Organisms → cellular organisms → Bacteria → Acidobacteria	2884	Open in IMG/M
3300018019\|Ga0187874_10142845	Not Available	1017	Open in IMG/M
3300018022\|Ga0187864_10266398	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300018034\|Ga0187863_10271225	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300018035\|Ga0187875_10092350	All Organisms → cellular organisms → Bacteria	1727	Open in IMG/M
3300020579\|Ga0210407_10000083	All Organisms → cellular organisms → Bacteria	125319	Open in IMG/M
3300020579\|Ga0210407_10028864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4124	Open in IMG/M
3300020579\|Ga0210407_10185191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1615	Open in IMG/M
3300020580\|Ga0210403_10006838	All Organisms → cellular organisms → Bacteria	9539	Open in IMG/M
3300020580\|Ga0210403_10015161	All Organisms → cellular organisms → Bacteria	6196	Open in IMG/M
3300020580\|Ga0210403_10020515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	5272	Open in IMG/M
3300020581\|Ga0210399_10097073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2407	Open in IMG/M
3300020581\|Ga0210399_10714242	Not Available	823	Open in IMG/M
3300020582\|Ga0210395_10098742	All Organisms → cellular organisms → Bacteria → Acidobacteria	2160	Open in IMG/M
3300021178\|Ga0210408_10224559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1495	Open in IMG/M
3300021180\|Ga0210396_10113030	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300021181\|Ga0210388_10043728	Not Available	3720	Open in IMG/M
3300021181\|Ga0210388_10508157	Not Available	1057	Open in IMG/M
3300021401\|Ga0210393_10305650	All Organisms → cellular organisms → Bacteria → Acidobacteria	1292	Open in IMG/M
3300021404\|Ga0210389_10150767	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300021406\|Ga0210386_10152356	All Organisms → cellular organisms → Bacteria → Acidobacteria	1934	Open in IMG/M
3300021407\|Ga0210383_11116995	Not Available	665	Open in IMG/M
3300021420\|Ga0210394_10000489	All Organisms → cellular organisms → Bacteria → Acidobacteria	83148	Open in IMG/M
3300021477\|Ga0210398_10727809	All Organisms → cellular organisms → Bacteria → Terrabacteria group	802	Open in IMG/M
3300021478\|Ga0210402_10253558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1625	Open in IMG/M
3300021478\|Ga0210402_10568036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300021478\|Ga0210402_11031769	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300021478\|Ga0210402_11349302	Not Available	640	Open in IMG/M
3300021559\|Ga0210409_10020135	All Organisms → cellular organisms → Bacteria	6500	Open in IMG/M
3300022840\|Ga0224549_1060745	Not Available	516	Open in IMG/M
3300025906\|Ga0207699_11199744	Not Available	562	Open in IMG/M
3300026214\|Ga0209838_1017819	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300026281\|Ga0209863_10255359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	501	Open in IMG/M
3300027505\|Ga0209218_1138398	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300027545\|Ga0209008_1135298	Not Available	544	Open in IMG/M
3300027575\|Ga0209525_1002305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4236	Open in IMG/M
3300027727\|Ga0209328_10027628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	1744	Open in IMG/M
3300027745\|Ga0209908_10026567	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300027884\|Ga0209275_10414329	Not Available	761	Open in IMG/M
3300027905\|Ga0209415_10350787	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300027908\|Ga0209006_10909147	Not Available	706	Open in IMG/M
3300028047\|Ga0209526_10291625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1106	Open in IMG/M
3300028556\|Ga0265337_1159624	Not Available	611	Open in IMG/M
3300028646\|Ga0302159_10128744	Not Available	578	Open in IMG/M
3300028759\|Ga0302224_10192398	Not Available	807	Open in IMG/M
3300028780\|Ga0302225_10233868	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300028800\|Ga0265338_10056795	All Organisms → cellular organisms → Bacteria → Acidobacteria	3467	Open in IMG/M
3300028868\|Ga0302163_10062530	Not Available	899	Open in IMG/M
3300029636\|Ga0222749_10012943	All Organisms → cellular organisms → Bacteria → Acidobacteria	3379	Open in IMG/M
3300029923\|Ga0311347_10673208	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300029990\|Ga0311336_10209189	All Organisms → cellular organisms → Bacteria → Acidobacteria	1593	Open in IMG/M
3300029990\|Ga0311336_10258453	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300029999\|Ga0311339_11717858	Not Available	549	Open in IMG/M
3300030002\|Ga0311350_10088889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2708	Open in IMG/M
3300030943\|Ga0311366_10107868	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300030943\|Ga0311366_10524011	All Organisms → cellular organisms → Bacteria → Acidobacteria	1031	Open in IMG/M
3300031057\|Ga0170834_111231368	All Organisms → cellular organisms → Bacteria → Acidobacteria	3010	Open in IMG/M
3300031090\|Ga0265760_10016481	All Organisms → cellular organisms → Bacteria → Acidobacteria	2121	Open in IMG/M
3300031122\|Ga0170822_16406136	Not Available	582	Open in IMG/M
3300031184\|Ga0307499_10044258	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300031231\|Ga0170824_112407033	Not Available	536	Open in IMG/M
3300031231\|Ga0170824_116076128	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300031234\|Ga0302325_13324564	Not Available	509	Open in IMG/M
3300031240\|Ga0265320_10537386	Not Available	517	Open in IMG/M
3300031261\|Ga0302140_10712974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	731	Open in IMG/M
3300031469\|Ga0170819_11115639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300031902\|Ga0302322_100089371	All Organisms → cellular organisms → Bacteria	3175	Open in IMG/M
3300031902\|Ga0302322_100817972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1112	Open in IMG/M
3300031918\|Ga0311367_11574458	Not Available	643	Open in IMG/M
3300032160\|Ga0311301_10449323	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300032160\|Ga0311301_10847856	Not Available	1243	Open in IMG/M
3300034124\|Ga0370483_0066591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300034282\|Ga0370492_0266177	Not Available	696	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.46%
Host-Associated	Host-Associated	2.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.75%
Aquatic	Environmental → Aquatic	12.71%
Plants	Host-Associated → Plants	2.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.34%
Peat	Environmental → Terrestrial → Peat	14.41%
Freshwater	Environmental → Aquatic → Freshwater	9.32%
Sediment	Environmental → Aquatic → Sediment	3.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.53%
Loam	Environmental → Terrestrial → Soil → Loam	15.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.32%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	9.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	5.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.24%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.39%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.39%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.69%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015082	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11c, vegetated hydrological feature)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1012621312	3300000364	Soil	MSLSEDVRPLLAARAATDPNAARLLEMFTKADEILSEGLLERTGDVAMPMLAQVPSGLLS
JGI12635J15846_103214052	3300001593	Forest Soil	MILGAGDRNVSLSDKVLPLLAARAATDPNAARLLEMFTRADEISSEHPPERIGDVEIPKL
JGIcombinedJ26739_1002729772	3300002245	Forest Soil	MYLSNDIRFLLAARAATDPHAARLLEMFTKADEILNEHSLERIGNVGMPKLVQVSSVLLSASAFHSQP*
Ga0062387_1015752062	3300004091	Bog Forest Soil	MSLSEDVRPLLAARAATDPNAARLLEMFTKADEILSEQSLERTWDVEVPRLAQVLSELLS
Ga0062386_1014243951	3300004152	Bog Forest Soil	MSLSENVRPLLAARAATDPNAARLLEMFTRADRILSERSRDQIEDVEMPSRATAL
Ga0070732_102474282	3300005542	Surface Soil	MSLSEDVRPLLAARAATDPNASRLLEMFTRADEILSKHSLERSGDAEMPRLAQVPSGLLS
Ga0070762_105017171	3300005602	Soil	MSLSENVRPLLAARAATDPNAARLLEMFTKADEILSEHSLGGIGDLEMPGAQVASGLLS*
Ga0070764_109753451	3300005712	Soil	MSLSEDVRPLLAARASTDPDAARLLEMFTNADEIVSEHSLERIGDVEIPGLAQVP
Ga0070766_111346321	3300005921	Soil	VGEDKTMSLSEDVRLLLSSRAATDPSAARLLEMFTKADEILREHSVERIGNRLQQLPSRF
Ga0066788_100178701	3300005944	Soil	MTLGAGDRTVSLSDELLPLLAARAVTDPDAARLLEIFTRADEISSEHSPERISDVEIPKL
Ga0066788_101799741	3300005944	Soil	EGDKTMSLSEDVRSLLAARAATDPNASRLLEMFTRADEVLSESSPVRTGNVKIPIEIASRVHY*
Ga0066787_100298571	3300005950	Soil	MSLSDALLPLLAARAVTDPDAARLLEIFTRADEISSKHPPERISDVEIPKL*
Ga0066790_104092932	3300005995	Soil	MSLSEDVRPLLAARAATDPNAARLLEMFTKADEILSERSLDGDRGLEMLRTQVPSGLLL*
Ga0066790_104126861	3300005995	Soil	MTPKLGGGDKTMSLSEDIRPLLAARAATDPSAARLLEMFTNADEILSEHSLERIGDVEMPKL*
Ga0066790_105148862	3300005995	Soil	TILPECVITLTMTLGAGDRTVSLSDELLPLLAARAVTDPDAARLLEIFTRADEISSEHSPERISDVEIPKL*
Ga0075029_1001106961	3300006052	Watersheds	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKIGDVEVPRLAQEPSGLLS
Ga0075017_1003292561	3300006059	Watersheds	SEDVRPLLAARAAIDPKAARLLEVFTRADEILSQRSLEGIDDLEMPRAQIPSRLLS*
Ga0075017_1012594442	3300006059	Watersheds	MSLSEDVRRLLVARAPTDPNAARLLEMFTKADEILSERSLERIGDVGIPRLAQVPSGLLS
Ga0075015_1002344112	3300006102	Watersheds	ENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKIGDVEVPRLAQEPSGLLS*
Ga0070716_1010078991	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPEDVRPLLAARAATDPNAAKLLEMFTKADEILSERPLERIGNAEMQPSRLLS*
Ga0070712_1005412021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSDRSLEKIGDVETPRLAQVPSGSLS
Ga0075521_105819271	3300006642	Arctic Peat Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLKKIGDVEMPRLAPVPAGLLS
Ga0116218_13438392	3300009522	Peatlands Soil	MSLSEDVRPLLAARAATDPNAAKLLEMFTKADEILSERSLEWIGDLEMPRAQVPSGSLS*
Ga0116135_10653042	3300009665	Peatland	MSLSEDVRPLLAARAATDPNAVRLLEMFARADKTLSEHSLERIGDNEMPKLAREPSGLLS
Ga0116217_101092632	3300009700	Peatlands Soil	MSLSENVRPLLAARAATDPNAARLLEVFTRADGMLSERSRDQIEDVEMPRVAQVPS*
Ga0136449_1003113484	3300010379	Peatlands Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSQRSLEKIGNVEMPRLAQVPSGLLS
Ga0136449_1006229063	3300010379	Peatlands Soil	MSLSENVRPLLAARAATDPNAARLLEMFTRADGMLSERSRDQIEDVEMPRVAQVPS*
Ga0150983_132185842	3300011120	Forest Soil	ENVRPLLAARAATDLNAARLLEMFTKADEMLSERSQEQIGNVETLRVAQVPSELLS*
Ga0150983_154868821	3300011120	Forest Soil	TMSFSGGVRLLLAARAASDPAAATLLEMFTKADAILSEQSPERIADVETPKL*
Ga0150983_164100211	3300011120	Forest Soil	VSLSEDVRPLLAARAPTDPNAAGLLEMFVKADEIVSEYWLERIGDGEMP
Ga0137376_108419582	3300012208	Vadose Zone Soil	AARAATDPNAARLLEMFAKADEILSERSLEKIGDVEMPRLAPVPSGLLS*
Ga0164303_101392411	3300012957	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKTGDVEMPR
Ga0164309_104055052	3300012984	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSDRSLEKIGDVEMPRLAQVPSGLLS
Ga0164304_110398922	3300012986	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKIGDVEMPRLAQEL*
Ga0164306_110097851	3300012988	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKTGDVEMPRL
Ga0164305_120851001	3300012989	Soil	MSLSENVRPLLAARAATDPNAARLLEIFTKADEGLGDYSLEGIGDPQMPRVQVPQGV*
Ga0181531_107784961	3300014169	Bog	MSVFGNIRPMLAARAATDPNAAKLLEMFTTADEIVSERSPEQIGNVETSRLAQVSSRLLS
Ga0181537_102203251	3300014201	Bog	MSLSEDVRPLLAARASTDPHAARLLEMFAKADEIVSEHPQVLIGDFEMFGLAQVPTDRRRN*
Ga0182015_100005644	3300014495	Palsa	MSLSENVRPLLAARAATDPNAAKLLEMFTRADETLSERSLEQIGDVEIPRLALQRNLYRGGR*
Ga0182019_103350993	3300014498	Fen	MDLGAGDRTVSLSDELLQLLSARAPTDPDAARLLEMFTRADEISSEHPPERVGDVEIPKV
Ga0182024_101094985	3300014501	Permafrost	MLPECVITLTMTLGAGGRTVSSSDKVLPMLAARAVTDPNAARLLEMFTRAAEISSEHPPERISDVEIPKL*
Ga0182024_104611522	3300014501	Permafrost	MSLSENVRPLLASRAATDPNAARLLEMFTRADETLSERSLEQIGDVEIPRLALQRNLYRGGR*
Ga0182024_107150741	3300014501	Permafrost	MSLSEDVRPLLAARAATDPNAARLLEMFRKADEILSEGSLEGIEDREMRRPKVPSGLLS*
Ga0167662_10220241	3300015082	Glacier Forefield Soil	GAGDRTVSLSDELLPLLAARAPTDPDAARLLEMFTRADEISSEHPPERVGDVEIPKL*
Ga0187879_100696803	3300017946	Peatland	MSLSEDVRPLLAARAATDPNAARLLEMFARADKTLSEHSLERIGDNEMPKLAREPSGLLS
Ga0187888_10272722	3300018008	Peatland	MSLSEDVRPLLAARAATDPNAASLLAMFTKADEILSERSLEWIGDLEMPRAQVPSGSLL
Ga0187874_101428452	3300018019	Peatland	MSLSENIRPLLAARAATDPNAARLLEMFAKADEILSERALEKIGDVEMPRLAQAPWDLS
Ga0187864_102663982	3300018022	Peatland	MSSSENVRPLLAARAATDPNAARLLEMFTKADEILSERSLEQIGDVEMPRLAQAPWDLS
Ga0187863_102712251	3300018034	Peatland	MSLSKSIRPLLAARAATDPNAATLLEMFTRADEILSERSREQIGAVEMPRVSQGPSGLLS
Ga0187875_100923502	3300018035	Peatland	MSLSEDVRPLLAARAATDPNAARLLEMFARADKTLSEHSLERIGDNEMPKLAREPSGMLS
Ga0210407_10000083103	3300020579	Soil	MPLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKIVDVERPRLA
Ga0210407_100288643	3300020579	Soil	MTLSEDVRTLLAARAPTDPNAARLLETFAKADEIMSVYSPERIGDVEMPRLAQVSSGLRS
Ga0210407_101851913	3300020579	Soil	MSFSGGVRLLLAARAASDPAAATLLEMFTKADAILSEQSPERIADVETPKL
Ga0210403_100068387	3300020580	Soil	MSLSDVRPLLAARAPTDPNAARLLEIFAKADEIVSEYSLERIGDVEMPRLAQVPPALPS
Ga0210403_100151612	3300020580	Soil	MSLSENVRPLLAARAATDPKAARLLEMFAKADEILSERSLEKIVDVEMPRLVQVPSALLS
Ga0210403_100205152	3300020580	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSEGSLEKIVDVERPRLAQAPSGLLS
Ga0210399_100970735	3300020581	Soil	VSLSEDVRPLLAARAPTDPNAAGLLEMFVKADEIVSEYWLERIGDGEMPRLAQVPSGLRS
Ga0210399_107142421	3300020581	Soil	MSDVRPLLAARAATDPNAARLLEIFTKVDEILSERSLERIETVEIPKLAQVSSGSLS
Ga0210395_100987423	3300020582	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSEGSLEKIVDVERPRLAQVPSGLLS
Ga0210408_102245593	3300021178	Soil	MILGTGDRTVSLSDELLPLLAARAATDPDAARLLEMFTRAAEISSKHPPERIGDVEIPKL
Ga0210396_101130303	3300021180	Soil	MPLSENVRPLLAARAATDPNAARLLEMFTKADEILSERSLEKIVDVERPRLA
Ga0210388_100437284	3300021181	Soil	MSLSENVRRLLAARAATDPNAARLLEMFAKADEILSERSLERIRTVEIPGFAQKSSGSLS
Ga0210388_105081571	3300021181	Soil	MSLSEDVRPLLVARAATDPNAARLLEMFAKADAILSEHSLVRIGDVEMPKLARVSSGLLS
Ga0210393_103056502	3300021401	Soil	MSSDNVRPLLAVCAATDPNAAKLLEMLTNADEIVSERSLEQIGDVEPPRLVQVP
Ga0210389_101507672	3300021404	Soil	MYLSNDIRFLLAARAATDPHAARLLEMFTKADEILNEHSLERIGNVGMPKLVQVSSVLLSASAFHSQP
Ga0210386_101523565	3300021406	Soil	MSLSEDVRPLLAARASTDPDAARLLEMFTNADEIVSEHSLERIGDVEIPGLAQVPSGLLS
Ga0210383_111169952	3300021407	Soil	MSLSEAVRPLLTARAPTDPNAARLLEMFAKADEIVSEYLPERIGDVEIPRLTSAPRDCSR
Ga0210394_1000048950	3300021420	Soil	MSLSEEVRPLLTARAATDSDAARLLEIFTKADEILSELSRERIGDVETSGPVQVISGLLS
Ga0210398_107278093	3300021477	Soil	SENVRPLLAARAATDPNAARLLEMFTKADEILSERSLEKIVDVERPRLA
Ga0210402_102535582	3300021478	Soil	MSLSENVRPLLAARAASDPNAARLLEMFTKADEILSERSLEKIGDVEMPRLAQLPSGLLS
Ga0210402_105680362	3300021478	Soil	MSLSEDVRPLLAARAATDPNAARLLEMFTRADEILSEHSLEPIGDFEMSRLAQVPSELLS
Ga0210402_110317692	3300021478	Soil	MPLSIDVRPLLTARAAIDPNAARLLEMFTKADEILSEHSLERIGDVEIPGLAQTHSGVLS
Ga0210402_113493021	3300021478	Soil	MSLSEDVRPLLAARAATDPNAARLLEMFTKADEILSERSLEGIGDLEMPRAQVPS
Ga0210409_1002013513	3300021559	Soil	VSLSDELLPLLAVRAATDPDAARLLEKFTRAAEISSKHPPERIGDVEIPKL
Ga0224549_10607452	3300022840	Soil	DVRPLLAARAATDPSAARLLEMFTKADEILSEHSLERIGDVEMPKTARMSSGLLL
Ga0207699_111997442	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKTGDVEMPRLAQVPSGLLS
Ga0209838_10178192	3300026214	Soil	MSLSDALLPLLAARAVTDPDAARLLEIFTRADEISSKHPPERISDVEIPKL
Ga0209863_102553592	3300026281	Prmafrost Soil	VSLSDELLPLLAARAVTDPDAARLLEIFTRADEISSEHSPERISDVEIPKL
Ga0209218_11383982	3300027505	Forest Soil	MSLSEDVRPLLAARAATDPDAARLLEMFTEADEILSEHSLERIGDIEMP
Ga0209008_11352981	3300027545	Forest Soil	MSLSEDVRPLLAARVANDPNAARLLEMFTEADESVSSYSPARIEDVEVPKLAHVLSEKMS
Ga0209525_10023055	3300027575	Forest Soil	MSLSEDVRPLLAARVANDPNAARLLEMFTEADESVSSYSPARIEDVEVPKLAHVLSEKLS
Ga0209328_100276282	3300027727	Forest Soil	VSLSDKVLPLLAARAATDPNAARLLEMFTRADEISSEHPPERIGDVEIPKL
Ga0209908_100265673	3300027745	Thawing Permafrost	MSLSEDVRPLLAARAATDPSAARLLEMFTKADEILSEHSLERIGDVEMPKTCLLYTSRCV
Ga0209275_104143291	3300027884	Soil	MSLSENVRPLLAARAATDPNAARLLEMFTKADEILSEHSLGGIGDLEMPGAQVASGLLS
Ga0209415_103507871	3300027905	Peatlands Soil	LGAGDKTMSSTEEVRSLLAARAATDPDAARLLEMFTKADEVLGDYSPNGIGDPQMPRVQVPSGI
Ga0209006_109091471	3300027908	Forest Soil	MSLSENVRPLLAARAAADPNAARLLEMFAKADEIVSEYSPERVGDVEVPRLAQAPSSGFR
Ga0209526_102916251	3300028047	Forest Soil	RQRQVGRVPTPMLAARAATDPNAARLLEMFTRADEISSEHPPERIGDVEIPKL
Ga0265337_11596241	3300028556	Rhizosphere	MSLSENVRPLLAARAPTDPNAARLLEMFAKADEILSERSLGKIGDTEKPRLAQVPSGLLS
Ga0302159_101287441	3300028646	Fen	MSLSVEVRPMLAARAAADPNAARLLEMFRNADEVLNGRSPVQIGDVEMPRLAQVPSKSLSEYLVQHQLS
Ga0302224_101923981	3300028759	Palsa	MSLPEDVRPLLAARAATDPSAARLLEMFTKADEILSEHSIERIGDVEMPRLAQVPSRLLL
Ga0302225_102338682	3300028780	Palsa	LPEDVRPLLAARAATDPSAARLLEMFTKADEILSEHSIERIGDVEMPRLAQVPSRLLL
Ga0265338_100567953	3300028800	Rhizosphere	MSLSENVRPLLAARAPTDPNAARLLEIFAKADEILSERSLGKIGDTEKPRLAQVPSGLLS
Ga0302163_100625302	3300028868	Fen	MSLSVDVRPMLAARPAADPNAARLLEMFRNADEVLNGRSPVQIGDVEMPRLAQVPSKSLSEYLVQHQLS
Ga0222749_100129432	3300029636	Soil	MSLSEDVRPLLAARAATDPNAARLLEIFTKADEILSERSLEGIRDLEMPRAQVPSGLLS
Ga0311347_106732081	3300029923	Fen	MPLSEDVRPLLVARAATDPSAARLLQMFKKADEIVSEHSKERIVDVPMPRLAPVPSGLLS
Ga0311336_102091891	3300029990	Fen	MPLSEDVRPLLVARAATDPNAARLLQMFKKADEIVSEHSKERIVAVPLPRLAPVPSGSYPRVPNAHFTNNR
Ga0311336_102584532	3300029990	Fen	MSLSENVRSLLAARAATDPNAARLLEMFAKADEILSERSLEKIGDVEMPRLAQVPSGLLS
Ga0311339_117178582	3300029999	Palsa	MSLSEDVRPLLAARAATDPSAARLLEMFTKADEILSEHSLERIGDVEMPKTARMSSGLLL
Ga0311350_100888891	3300030002	Fen	MSLSVNVRPMLAARAAADPNAARLLEMFRNADEVLNGRSPVQIGDVEMPRLAQVPSKSLSEYLVQHQLS
Ga0311366_101078681	3300030943	Fen	SEDVRPLLVARAATDPNAARLLQMFKKADEIVSEHSKERIVDVPLPRLAPVPSGFLS
Ga0311366_105240113	3300030943	Fen	MPLSEDVRPLLVARAATDPNAARLLQMFKKADEIVSEHSKERIVAVPLPRLA
Ga0170834_1112313682	3300031057	Forest Soil	MSLSENVRPLLAARAATDPDAARLLEMFAKADEILSERSLEKIGDVEMPRLAQVRPPSCSFETFRPAAGIM
Ga0265760_100164814	3300031090	Soil	MSSSEDVRPLLAARAATDPNAARLLKMFKKADEVLGDYSLKAIGDPQMPRVQAPSGV
Ga0170822_164061361	3300031122	Forest Soil	MSLSENVRPLLAARAATDPDAARLLEMFAKADEILSERSLEKIGDVEMPRLAQVRPPSCSFETF
Ga0307499_100442582	3300031184	Soil	MSLYEDVRPLLATRAATDPNAARLLEMFTKADEILGDYSLKGIGDPQMPRVQVPSGV
Ga0170824_1124070332	3300031231	Forest Soil	MSLSESVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKGGGDVEMPRLVQVPSGPRDCS
Ga0170824_1160761281	3300031231	Forest Soil	MSLSENVRPLVAARAATHPNAARLLEMFAKSDEILSEPSLEKIGDVEMPRLVQVPSGLS
Ga0302325_133245641	3300031234	Palsa	MSLSEDVRPLLAARAATDPSAARLLEMFTKADEILSEHSLERVGDVEMPRPAQVPSGFLL
Ga0265320_105373861	3300031240	Rhizosphere	MTLVAGDRTVSSSDKVLPLLAARAATDPDAVKLLEMFTRAAEISSEHPPERIGDVEITKL
Ga0302140_107129741	3300031261	Bog	MPLSEDVRPLLAARAATDPDAARLLEMFTKADEILSERSLEGIGNVEMPGLSQVSSLRRA
Ga0170819_111156392	3300031469	Forest Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKGGGDVEMPRLVQVPSGPRDCSWK
Ga0302322_1000893711	3300031902	Fen	MSLSVDVRPMLAARPAADPNAARLLEMFRNADEVLNGRSPVQIGDVGMPRLAQVPSKSLSEYLVQHQLS
Ga0302322_1008179723	3300031902	Fen	LSENVRSLLAARAATDPNAARLLEMFAKADEILSERSLEKIGDVEMPRLAQVPSGLLS
Ga0311367_115744582	3300031918	Fen	PMLAARPAADPNAARLLEMFRNADEVLNGRSPVQIGDVGMPRLAQVPSKSLSEYLVQHQL
Ga0311301_104493233	3300032160	Peatlands Soil	MSLSENVRPLLAARAATDPNAARLLEMFTRADGMLSERSRDQIEDVEMPRVAQVPS
Ga0311301_108478561	3300032160	Peatlands Soil	MSLSEDVRPLLAARAATDPNAAKLLEMFTKADEILSERSLEWIGDLEMPRAQVPSGSLS
Ga0370483_0066591_360_542	3300034124	Untreated Peat Soil	MSLSENVRPLLAARAATDPSAASLLEMFTRADEILSESSLKQIEDAEMLRLTQVPSGLLL
Ga0370492_0266177_1_177	3300034282	Untreated Peat Soil	MSLSENVRPLLAARAATDPSAASLLEMFTRADEILSESSLKQIEDAEMLRLTQVPSGLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076405

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences