Metagenome Family F076463

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076463
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	91 residues
Representative Sequence	MTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGQRLRISRFDKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEDASMEKT
Number of Associated Samples	78
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	13.56 %
% of genes near scaffold ends (potentially truncated)	50.00 %
% of genes from short scaffolds (< 2000 bps)	93.22 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (61.017 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.034 % of family members)
Environment Ontology (ENVO)	Unclassified (21.186 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.254 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 47.93% Coil/Unstructured: 52.07%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00294	PfkB	4.24
PF00536	SAM_1	2.54
PF00589	Phage_integrase	1.69
PF07647	SAM_2	1.69
PF01575	MaoC_dehydratas	0.85
PF13405	EF-hand_6	0.85
PF13458	Peripla_BP_6	0.85
PF04909	Amidohydro_2	0.85
PF12399	BCA_ABC_TP_C	0.85
PF00211	Guanylate_cyc	0.85
PF01799	Fer2_2	0.85
PF00036	EF-hand_1	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.02 %
All Organisms	root	All Organisms	38.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.02 %
cellular organisms	root	All Organisms → cellular organisms	38.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.02 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.80 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.02 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	16.95 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.02 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.02 %
Bradyrhizobium barranii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii	4.24 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.02 %
Bradyrhizobium barranii subsp. barranii	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	4.24 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10185764	Not Available	842	Open in IMG/M
3300004152\|Ga0062386_101072964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	668	Open in IMG/M
3300005332\|Ga0066388_101115141	Not Available	1338	Open in IMG/M
3300005332\|Ga0066388_103224408	Not Available	833	Open in IMG/M
3300005332\|Ga0066388_107836389	Not Available	535	Open in IMG/M
3300005332\|Ga0066388_108593808	Not Available	508	Open in IMG/M
3300005436\|Ga0070713_102047843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	555	Open in IMG/M
3300005764\|Ga0066903_102058515	Not Available	1098	Open in IMG/M
3300005764\|Ga0066903_102161252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1073	Open in IMG/M
3300005764\|Ga0066903_108164913	Not Available	536	Open in IMG/M
3300006052\|Ga0075029_100307319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300006057\|Ga0075026_100851592	Not Available	557	Open in IMG/M
3300006059\|Ga0075017_100592554	Not Available	847	Open in IMG/M
3300006059\|Ga0075017_100730606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	763	Open in IMG/M
3300006086\|Ga0075019_10805886	Not Available	599	Open in IMG/M
3300006102\|Ga0075015_100079456	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300006102\|Ga0075015_100159754	Not Available	1178	Open in IMG/M
3300006172\|Ga0075018_10201569	Not Available	944	Open in IMG/M
3300006174\|Ga0075014_100161902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1101	Open in IMG/M
3300006174\|Ga0075014_100162262	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300006354\|Ga0075021_10235012	Not Available	1125	Open in IMG/M
3300009521\|Ga0116222_1151392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300009522\|Ga0116218_1143854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1083	Open in IMG/M
3300009522\|Ga0116218_1408805	Not Available	606	Open in IMG/M
3300009524\|Ga0116225_1358341	Not Available	649	Open in IMG/M
3300009525\|Ga0116220_10195272	Not Available	876	Open in IMG/M
3300009683\|Ga0116224_10052477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1990	Open in IMG/M
3300009824\|Ga0116219_10114724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1570	Open in IMG/M
3300010048\|Ga0126373_12481802	Not Available	578	Open in IMG/M
3300010048\|Ga0126373_12940866	Not Available	531	Open in IMG/M
3300010361\|Ga0126378_10556371	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300010361\|Ga0126378_11922990	Not Available	674	Open in IMG/M
3300010362\|Ga0126377_12844133	Not Available	558	Open in IMG/M
3300010366\|Ga0126379_11789918	Not Available	718	Open in IMG/M
3300010376\|Ga0126381_100400961	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300010379\|Ga0136449_100146927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4640	Open in IMG/M
3300010379\|Ga0136449_102314270	Not Available	779	Open in IMG/M
3300012181\|Ga0153922_1080050	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300012957\|Ga0164303_10326556	Not Available	916	Open in IMG/M
3300012960\|Ga0164301_11026637	Not Available	650	Open in IMG/M
3300012984\|Ga0164309_11297392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	616	Open in IMG/M
3300012987\|Ga0164307_11466688	Not Available	576	Open in IMG/M
3300012989\|Ga0164305_10163700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1525	Open in IMG/M
3300016270\|Ga0182036_10627182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300016270\|Ga0182036_11201198	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300016270\|Ga0182036_11601880	Not Available	548	Open in IMG/M
3300016357\|Ga0182032_10757646	Not Available	818	Open in IMG/M
3300016404\|Ga0182037_11164164	Not Available	676	Open in IMG/M
3300016404\|Ga0182037_11636581	Not Available	573	Open in IMG/M
3300016445\|Ga0182038_11089493	Not Available	710	Open in IMG/M
3300016445\|Ga0182038_11647645	Not Available	578	Open in IMG/M
3300017822\|Ga0187802_10170885	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300017822\|Ga0187802_10286797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	640	Open in IMG/M
3300017924\|Ga0187820_1213796	Not Available	606	Open in IMG/M
3300017942\|Ga0187808_10520133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	552	Open in IMG/M
3300017943\|Ga0187819_10525262	Not Available	674	Open in IMG/M
3300017955\|Ga0187817_10168003	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300017955\|Ga0187817_10318943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	991	Open in IMG/M
3300017955\|Ga0187817_10498671	Not Available	777	Open in IMG/M
3300017970\|Ga0187783_10011169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6604	Open in IMG/M
3300017970\|Ga0187783_10037246	All Organisms → cellular organisms → Bacteria → Proteobacteria	3605	Open in IMG/M
3300017970\|Ga0187783_11080254	Not Available	578	Open in IMG/M
3300017972\|Ga0187781_10000317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	34459	Open in IMG/M
3300017995\|Ga0187816_10326064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	676	Open in IMG/M
3300017995\|Ga0187816_10554765	Not Available	517	Open in IMG/M
3300020580\|Ga0210403_10849795	Not Available	723	Open in IMG/M
3300020581\|Ga0210399_10383552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	1172	Open in IMG/M
3300020583\|Ga0210401_10122881	All Organisms → cellular organisms → Bacteria → Proteobacteria	2435	Open in IMG/M
3300020583\|Ga0210401_10225757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1731	Open in IMG/M
3300020583\|Ga0210401_11428657	Not Available	549	Open in IMG/M
3300021168\|Ga0210406_10944570	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300021168\|Ga0210406_11235223	Not Available	542	Open in IMG/M
3300021171\|Ga0210405_10128809	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300021171\|Ga0210405_10637345	Not Available	828	Open in IMG/M
3300021178\|Ga0210408_10276799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1338	Open in IMG/M
3300021178\|Ga0210408_11051332	Not Available	628	Open in IMG/M
3300021178\|Ga0210408_11259321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	562	Open in IMG/M
3300021406\|Ga0210386_10316799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	1338	Open in IMG/M
3300021432\|Ga0210384_10733949	Not Available	883	Open in IMG/M
3300021432\|Ga0210384_11575235	Not Available	562	Open in IMG/M
3300021474\|Ga0210390_10664992	Not Available	870	Open in IMG/M
3300021474\|Ga0210390_11121593	Not Available	638	Open in IMG/M
3300021474\|Ga0210390_11245789	Not Available	599	Open in IMG/M
3300021479\|Ga0210410_10314582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1405	Open in IMG/M
3300021559\|Ga0210409_11489329	Not Available	553	Open in IMG/M
3300027604\|Ga0208324_1073868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	970	Open in IMG/M
3300027604\|Ga0208324_1165876	Not Available	597	Open in IMG/M
3300027854\|Ga0209517_10338725	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300027915\|Ga0209069_10022686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2939	Open in IMG/M
3300031231\|Ga0170824_104921904	Not Available	721	Open in IMG/M
3300031446\|Ga0170820_16503055	Not Available	685	Open in IMG/M
3300031446\|Ga0170820_16669503	Not Available	828	Open in IMG/M
3300031474\|Ga0170818_104968535	Not Available	500	Open in IMG/M
3300031474\|Ga0170818_114453238	Not Available	677	Open in IMG/M
3300031543\|Ga0318516_10740913	Not Available	557	Open in IMG/M
3300031718\|Ga0307474_10717009	Not Available	790	Open in IMG/M
3300031719\|Ga0306917_11388795	Not Available	542	Open in IMG/M
3300031753\|Ga0307477_10421955	Not Available	912	Open in IMG/M
3300031754\|Ga0307475_10556576	Not Available	920	Open in IMG/M
3300031781\|Ga0318547_10809494	Not Available	584	Open in IMG/M
3300031823\|Ga0307478_10459919	Not Available	1059	Open in IMG/M
3300031833\|Ga0310917_10480300	Not Available	846	Open in IMG/M
3300031833\|Ga0310917_10727343	Not Available	672	Open in IMG/M
3300031879\|Ga0306919_10555015	Not Available	886	Open in IMG/M
3300031890\|Ga0306925_10368984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1541	Open in IMG/M
3300031910\|Ga0306923_10582244	Not Available	1258	Open in IMG/M
3300031941\|Ga0310912_10582403	Not Available	871	Open in IMG/M
3300031947\|Ga0310909_11448133	Not Available	548	Open in IMG/M
3300031954\|Ga0306926_10787985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1147	Open in IMG/M
3300032001\|Ga0306922_11411180	Not Available	700	Open in IMG/M
3300032160\|Ga0311301_10021549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18024	Open in IMG/M
3300032160\|Ga0311301_10804173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1291	Open in IMG/M
3300032180\|Ga0307471_102580914	Not Available	644	Open in IMG/M
3300032180\|Ga0307471_103760921	Not Available	537	Open in IMG/M
3300032261\|Ga0306920_100834766	Not Available	1351	Open in IMG/M
3300032261\|Ga0306920_101728738	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300032261\|Ga0306920_102583943	Not Available	697	Open in IMG/M
3300032261\|Ga0306920_104144204	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.15%
Host-Associated	Host-Associated	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.66%
Aquatic	Environmental → Aquatic	19.49%
Fungi	Host-Associated → Fungi	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.66%
Sediment	Environmental → Aquatic → Sediment	10.17%
Freshwater	Environmental → Aquatic → Freshwater	9.32%
Mycelium	Host-Associated → Fungi → Mycelium	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.32%
Loam	Environmental → Terrestrial → Soil → Loam	7.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.39%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.25%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_101857641	3300003505	Forest Soil	MTNKAGQTGSVQVEEHMIFWIDDAAKTFIFSDGQRLRINRFDKSWISASSEDIQYEFNRVDRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0062386_1010729641	3300004152	Bog Forest Soil	MTDKGGLKGSVKVEEHMTFSIDGTAKTFIFSDGRPLQVTRFDKSWISGNSENIQYEFNRADGTLTYAGSTTKDNVTTTVVGSGLCEEASTEKT*
Ga0066388_1011151411	3300005332	Tropical Forest Soil	SVQVEEHMTFWIDDAAKTFIFSDGRRLRVTRFDKSWISGSSEDMQYEFNRTDRTLTYAGSTTKDNVTTTIVGSGLCDNAY*
Ga0066388_1032244081	3300005332	Tropical Forest Soil	MTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGQRLRISRFDKSWISANSEDIQYEFNRADHTLTYAGSTTKDNVTTTIVGSGRCEDASMEKT*
Ga0066388_1078363891	3300005332	Tropical Forest Soil	TEQARTQFECAATKVIMTNKAGQTGSVQVEEHMTFWIDDAAKTFIFSDGQRLRISRFDKSWISASSEDIQYEFNRADRTLTYAGSITEDSVTTTIVGSGLCEDASTEKT*
Ga0066388_1085938081	3300005332	Tropical Forest Soil	ASDGSNAHSIRLTTKVIMTDKAGHKDSIQVEEPISFLIDDAAKTVAFSDGRRLRVARFKANSEDVQYEFNRAEGTLTYAGSTTKDNVTTTIVGSGRCENASAEKT*
Ga0070713_1020478431	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	WIDDAAKTFIFSDGRRLRISRFDKSWISASSDHIQYEFNRADRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0066903_1020585152	3300005764	Tropical Forest Soil	MTDKAGRKDLVQVEERMSFLIDDAAKTVIFSDGRRLRVARFDKFWISANSDDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENASAEKT*
Ga0066903_1021612521	3300005764	Tropical Forest Soil	EEHMTFWIDDAAKTFIFSDGRRLRVTRFDKSWISGNSEDIQYEFNRADSTLTYAGSTTKDNVTTTIIGSGRCEDASTIKT*
Ga0066903_1081649131	3300005764	Tropical Forest Soil	KVIMTDKAGHKDTVHVEGHMTFLIDDVAKTVTFSDSRPLRIARFDRSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENASAEKT*
Ga0075029_1003073191	3300006052	Watersheds	NSVEVEEHMIFWIDDAAKTFILSDGRRLRISRFDKSWISASSDDIQYEFNRTDRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0075026_1008515921	3300006057	Watersheds	MTNKAGQKGSVEVEENMTFWIDDATKTFVLSDGRRLRISRFDKSWISASSDDIQYEFNRTDRTLTYAGSTTKDNVTTIIVGSGLCEDASTEK
Ga0075017_1005925542	3300006059	Watersheds	LTNAAGRDESTRIEEHLNFLIDDAETTLAFSDGGRLRVVRFDHSWISADRDDIRYEFNRSDGTLTYAGSTTEGNATTTIVGSGRCETLPRGKAQ*
Ga0075017_1007306062	3300006059	Watersheds	MTDRAGHKGSVQVEEPMTFFIDDGAKTVTFSDGRQLRVVRFDKSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCENVSNIE*
Ga0075019_108058862	3300006086	Watersheds	VKVEEHMTFSIDGTPKTFIFSDGRPLQVARFDKSWISGNSENIQYEFNRADGTLTYAGSTTKDNVTTTVVGSGLCEEASTEKT*
Ga0075015_1000794563	3300006102	Watersheds	YKCVTTKVIMTDKGGLKGSVKVEEHMTFSIDGTAKTFIFSDGRPLQVTRFDKSWISGNSENIQYEFNRADGTLTYAGSTTKDNVTTTVVGSGLCEEASTEKT*
Ga0075015_1001597541	3300006102	Watersheds	MTNKAGQTNSVEVEEHMIFWIDDAAKTFILSDGRRLRISRFDKSWISASSDDIQYEFNRTDRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0075018_102015691	3300006172	Watersheds	MTNKAGQTNSVEVEEHMIFWIDDAAKTFILSDGRRLRISRFDKSWISASSDDIQYEFNRTDRTLSYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0075014_1001619022	3300006174	Watersheds	MTDRAGHKGSVQVEEPMTFFIDDAAKTVTFSDGRRLRVARFDKSWISANSEAIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCENASTIE*
Ga0075014_1001622621	3300006174	Watersheds	IMTDKAGHQGSVQVEEHMTFLIDDAAKTFIFSDGRRLRVTRFDKSWISGNSEDVQYELNRADGTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0075021_102350121	3300006354	Watersheds	MTNKAGQTNSVEVEEHMIFWIDDAAKTFILSDGRRLRISRFDKSWISASSDDIQYEFNRTDRTDRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0116222_11513922	3300009521	Peatlands Soil	MTNKAGQTGSVQVEEHMTFWIDAAAKTFIFSDGRRLRVTRFEKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0116218_11438542	3300009522	Peatlands Soil	MTNKAGQTGSVQVEEHMTFWIDAAAKTFIFSDGRRLRVTRFEKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTAIVGSGLCEDASTEKT*
Ga0116218_14088051	3300009522	Peatlands Soil	RVEEHMSFWIDDAAKSFAFSDGRRLRVTRFDKSWISANSDDTQYQFNRSDGTLTCAGSTTEGNTTTTIVGSGRCEKATQ*
Ga0116225_13583411	3300009524	Peatlands Soil	ARTPFNCVITKVIITDKAERDRPVRVEEHMSFWIDDAAKAFAFSDGRRLRVTRFDKSWISANSDDTQYEFNRGDGTLTYAGSTAEGNTTTTIVGSGRCEKGTQ*
Ga0116220_101952722	3300009525	Peatlands Soil	MTNKAGQTGSVQVEEHMTFWIDAAAKTFIFSDGRRLRVTRFEKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTAIVGSGLCEDASTKKT*
Ga0116224_100524775	3300009683	Peatlands Soil	MSFWIDDAAKSFAFSDGRRLRVTRFDKSWISANSDDTQYEFNRGDGTLTYAGSTAEGNTTTTIVGSGRCEKGTQ*
Ga0116219_101147241	3300009824	Peatlands Soil	MTNKAGQTGSVQVEEHMTFWIDDAAKTFIFSDGRRLRVTRFEKSWISANSEDIQYEFNRADGTITYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0126373_124818021	3300010048	Tropical Forest Soil	TFWIDDAAKTFIFSDGQLLRISRFDKSWISGSSEDIQYEFNRADHTLTYAGSTTKDNVTTTIVGSGRCEDASMEKT*
Ga0126373_129408662	3300010048	Tropical Forest Soil	LIDDAAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRADSTLTYAGSTTKDNVTTTIVG
Ga0126378_105563711	3300010361	Tropical Forest Soil	VRQGEQTRIQLDSASTKVIMTDKAGRKDLVQVEERMSFLIDDAAKTVIFSDGRRLRVARFDKFWISANSDDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENASAEKT*
Ga0126378_119229902	3300010361	Tropical Forest Soil	MTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGQLLRISRFDKSWISGSSEDIQYEFNRADRTLTYAGSTTKDNVTTTIVGSGRC
Ga0126377_128441331	3300010362	Tropical Forest Soil	TKVIMTDKAGRKDLVQVEERMSFLIDDAAKTVIFSDGRRLRVARFDKFWISANSDDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENASAEKT*
Ga0126379_117899182	3300010366	Tropical Forest Soil	KVIMTDKAGHKDAVQVEERITFLIDDAAKTVIFSDGRRLRVARFDKFWISGNSDDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENASAEKT*
Ga0126381_1004009611	3300010376	Tropical Forest Soil	MTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGQLLRISRFDKSWISGSSEDIQYEFNRADRTLTYAGSTSKDYVTTTIVGSGRCEEASTMKT*
Ga0136449_1001469271	3300010379	Peatlands Soil	MTNKAGQTGSVQVEEHMTFWIDAAAKTFIFSDGRRLRVTRFEKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTT
Ga0136449_1023142701	3300010379	Peatlands Soil	MTFFIDDTAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEKASTIE*
Ga0153922_10800502	3300012181	Attine Ant Fungus Gardens	IDDAAKTVIFSDGRRLRIARFDKFWISANSEDVQYEFNRADGTLTYAGSMTKDNVTTTIIGSGHCENASSEKT*
Ga0164303_103265561	3300012957	Soil	MTFFFDDAAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEKASTIE*
Ga0164301_110266371	3300012960	Soil	MTFFIDDAAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEKASTIE*
Ga0164309_112973922	3300012984	Soil	QTEQARTQFECATTKVIMTNKAGQTGSVQLEEHMTFWIDDAAKTFIFSDGRRLRISRFDKSWISASSDDIQYEFNRADRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0164307_114666881	3300012987	Soil	GQTGSVQLEEHMTFWIDDAAKTFIFSDGRRLRISRFDKSWISASSDDIQYEFNRADRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT*
Ga0164305_101637002	3300012989	Soil	MTFFIDDGAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRTDGTLTYAGSTTKDNVTTTIVGSGRCEKASTIE*
Ga0182036_106271822	3300016270	Soil	MTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGQLLRISRFDKSWISGSSEDIQYEFNRADRTLTYAGSTTKDNVTTTIVGSGRCEDASTIKT
Ga0182036_112011981	3300016270	Soil	EKASSQFECATTKVIMTNKAGQTGSVQVDQHITFRIDDAAKTFIFSDGQRLRISRFDKSWISASSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEDASTIKT
Ga0182036_116018801	3300016270	Soil	MTFWIDDAAKTFIFSDGQLLRISRFDKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEDASMEKT
Ga0182032_107576462	3300016357	Soil	MTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGQLLRISRFDKSWISGSSEDIQYEFNRADRTLTYAGSTTKDNVTTTIVSSGRCEDASTIKT
Ga0182037_111641641	3300016404	Soil	MTNKTGQTGSVQVEEHMTFWIDDAAKTFIFSDGQRLRISRFDKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCE
Ga0182037_116365811	3300016404	Soil	QVEEHLTFWIDDAAKTFIFSDGQLLRISRFDKSWISRSSEDIQYEFNRADRTLTYAGSTSKDDVTTTIVGSGRCEDASTMKT
Ga0182038_110894931	3300016445	Soil	MTNKAGQTGWVQVDQHITFWIDDAAETFIFSDGQRLRISRFDKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVATTI
Ga0182038_116476451	3300016445	Soil	MTNKAGQTGSVQVEEHMTFWIDDAAKTFIFSDGRRLRVTRFDKSWISASSEDIQYEFNRADHTLTYAGSTTKDNVTTTIVSSGRCEDVSMEKT
Ga0187802_101708851	3300017822	Freshwater Sediment	ARQTERARTQIDCTTTKVIMTNKAGQKDLVQVEDHMTFWIDDAAKTFIFSDGRRLRVTRFDKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGLCEDASTEKPEQ
Ga0187802_102867972	3300017822	Freshwater Sediment	ETEQARTRFKCVTNKVIMTDKAGLKGSGQVEEHMTFSIDDVAKAFIFSDGRPLRVTRFDKSWISGNSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGVCEDASTEKT
Ga0187820_12137961	3300017924	Freshwater Sediment	MTNKAGQTNSVEVEEHMIFWIDDAAKTFILSDGRRLRISRFDKSWISASSDDIQYEFNRTDRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0187808_105201332	3300017942	Freshwater Sediment	QTEQARTQFECATTKVIMTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGRRLRVTRFDKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0187819_105252621	3300017943	Freshwater Sediment	PAQARQTEQPRTQFECATTKVIMTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGQRLRISRFDKSWISASSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0187817_101680033	3300017955	Freshwater Sediment	ARQTEQPRTQFECATTKVIMTNKAGQTGSVQVEEHMTFWIDDTAKTFIFSDGQRLRINRFDKSWISASSNDIQYEFNRADGMLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0187817_103189431	3300017955	Freshwater Sediment	MTNKAGQTGSVQVEEHMTFWIDDAAKTFNFSDARRLRVTRFEKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0187817_104986712	3300017955	Freshwater Sediment	MTNKAGQTGSVQVEEHMIFSIDDAAKTFIFSDGRSLRVTRFDKSWISGNSEDIQYEFNRADATLTYAGSTTKDNVTTTIVGSGV
Ga0187783_100111693	3300017970	Tropical Peatland	VTDKAGHTGSVQVEEHLTFLIDDAAKTVIFSDGRRLRITRFDKSWISANSEDVRYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENAAAEKT
Ga0187783_100372464	3300017970	Tropical Peatland	MTNKAGQTGSVQVEEHVTFWIDDAAKTFIFSGGQRLRISRFDKSWISGSSGDIRYEFNRADDTLTYAGSTTEDNITTTIVGSGRCEDASTIKT
Ga0187783_110802541	3300017970	Tropical Peatland	TKVVVTDKAGHKDAVQMEGRMTFLIDDAAKTVFFSDGRRLRITRFDKSWISANSEDIDYEFNRADGTLSYAGSTTTDNVTTTIIGSGRCQMSAEKT
Ga0187781_100003173	3300017972	Tropical Peatland	MTDKAGHKGLVQVEEHMTFWIDDTAKTFVFSDGRRLRVTRFDKSWISANSEDVRYEFNRADGTLSYAGSATNDNVTTTIIGSGRCENASTEKS
Ga0187816_103260642	3300017995	Freshwater Sediment	VTFFIDDAAKTVIFSDGRRLRVTRFDKSWISANSEDVQYELNRADGTLTYAGSTNKDNVTANIVGSGLCKNASMEKT
Ga0187816_105547652	3300017995	Freshwater Sediment	VIMTAKAGLKSSVQVEEHMTFSIDDAAKAFIFSDGRRLRVTRFDKSWISASGDDIQYEFNRTDRTLTYAGSTSKDNVTTTIVGSGLCEDASTEKT
Ga0210403_108497951	3300020580	Soil	MSDRAGHKGSVQVEEPMTFFVDDAAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRTDGTLTYAGSTTKDNVTTTIVGSGRCEKASTIE
Ga0210399_103835523	3300020581	Soil	QARTQFECATTKVIMTNKAGQTGSVQLEEHMTFWIDDAAKTFIFSDGRRLRISRFDKSWISASSDDIQYEFNRADRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0210401_101228812	3300020583	Soil	MTNKAGQTGSVQVEEHMIFWIDDAAKTFIFSDGQRLRINRFDKSWISASSEDIQCEFNRVDRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0210401_102257571	3300020583	Soil	MSDRAGHKGSVQVEEPMTFFIDDAAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRTDGTLTYAGSTTKDNVTTTIVGSGRCEKASTI
Ga0210401_114286572	3300020583	Soil	MTDKAGHKGSVQVEEPITFLIDDVAKTVTFSDGRRLRVARFDKSWISANGEDVQYEFNRADGTLTYAGSTTKENVTTTIVGSGRCEMR
Ga0210406_109445702	3300021168	Soil	MTFFIDDAAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRTDGTLTYAGSTTKDNVTTTIVGSGRCEKASTIE
Ga0210406_112352231	3300021168	Soil	VITKVIMTDRAGHKGSVQVEEPMTFFIDDGAKTVTFSDGRQLRVVRFDKSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCENASTIE
Ga0210405_101288092	3300021171	Soil	VRNRQSHITNKAGQTGSVQVKEHMTFWIDDAAKTFIFSDGRRLRVTRFDKSWISANSEDIQYEFNRADGTLTYARSTTKDNVTTIIVGSGLCEDASTEKT
Ga0210405_106373452	3300021171	Soil	MDKRARSQVEEHMTFWIDDAAKAFVLSNGQRLRISRFDKSWISASSEDIQYEFNRADRTLTYAGSTTKDRVTTTIIGSGLCEDASTEKT
Ga0210408_102767991	3300021178	Soil	MTFWIDDAAKTFIFSDGRRLRVTRFDKSWISANSEDIQYEFNRADGTLTYARSTTKDNVTTIIVGSGLCEDASTEKT
Ga0210408_110513322	3300021178	Soil	MTFFIDDAAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEKASTIE
Ga0210408_112593212	3300021178	Soil	QLEEHMTFWIDDAAKTFIFSDGRRLRISRFDKSWISASSDDIQYEFNRADRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0210386_103167991	3300021406	Soil	ARQTEQARTQFECATTKVIMTNKAGQTGSVQLEEHMTFWIDDAAKTFIFSDGRRLRISRFDKSWISASSDDIQYEFNRADRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0210384_107339492	3300021432	Soil	QFDCAITKVIMSDRAGHKGSVQVEEPMTFFIDDAAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRTDGTLTYAGSTTKDNVTTTIVGSGRCEKASTIE
Ga0210384_115752351	3300021432	Soil	RQSHITNKAGQTGSVQVKEHMTFWIDDAAKTFIFSDGRRLRVTRFDKSWISANSEDIQYEFNRADGTLTYARSTTKDNVTTIIVGSGLCEDASTEKT
Ga0210390_106649921	3300021474	Soil	MTNKAGQTGSVQVEEHMIFWIDDAAKTFIFSDGQRLRINRFDKSWISASSEDIQYEFNRVDRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0210390_111215931	3300021474	Soil	MTFWIDDAAKTFIFSDGRRLRVTRFDKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTIIVGSGL
Ga0210390_112457891	3300021474	Soil	MHMTFWIDDGAKTFIFSDGRRLRVTRFEKSWISGSSEDIQYEFNQADRTLTYAGSTTKDNVTTTIVGSGRCEDASTIKS
Ga0210410_103145822	3300021479	Soil	MTDRAGHKGSVQVEEPMTFFIDDAAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEKASTIE
Ga0210409_114893292	3300021559	Soil	MTFWIDDAAKTFIFSDGRRLRVTRFDKSWISANSEDIQYEFNRADGSLTYAGSTTKDNVTTTIVGSGLCAEASTGNT
Ga0208324_10738682	3300027604	Peatlands Soil	MTNKAGQTGSVQVEEHMTFWIDAAAKTFIFSDGRRLRVTRFEKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTAIVGSGLCEDASTEKT
Ga0208324_11658762	3300027604	Peatlands Soil	QPVQARTPFNCVITKVIITDKAERDRPVRVEEHMSFWIDDAAKSFAFSDGRRLRVTRFDKSWISANSDDTQYQFNRSDGTLTCAGSTTEGNTTTTIVGSGRCEKATQ
Ga0209517_103387253	3300027854	Peatlands Soil	MTNKAGQTGSVQVEEHMTFWIDAAAKTFIFSDGRRLRVTRFEKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTAIVGSGLCE
Ga0209069_100226861	3300027915	Watersheds	MTNKAGQTNSVQVEEHMTFWIDDAAKTFIFSDGRRLRVTRFDKSWISASSEDIQYEFNRADGTLTYAGSTTKDNVTTTVVGSGLCEEASTEKT
Ga0170824_1049219041	3300031231	Forest Soil	HKGSVQVEEPMTFVIDDAAKTVTFSDGRRLRVARFDKSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCENASNIE
Ga0170820_165030552	3300031446	Forest Soil	TQFNCVTTKVIVTNKAGSKGSVQVEEHMTFSIDDAAKTFTFSDGRPLQVTRFDKSWISGNSENIQYEFNRADGTLTYAGSTTKDNE
Ga0170820_166695031	3300031446	Forest Soil	MTNKAGQTNSVEVEEHMTFWIDDAAKTFILSDGRRLRISRFDKSWISASSDDIQYEFNRADRTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0170818_1049685351	3300031474	Forest Soil	HKGSVQVEEPITFFIDDAAKTVTFSDGKRLRVARFDKSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCENASNIE
Ga0170818_1144532382	3300031474	Forest Soil	FNCVTTKVIVTNKAGSKGSVQVEEHMTFSIDDAAKTFTFSDGRPLQVTRFDKSWISGNSENIQYEFNRADGTLTYAGSTTKDNE
Ga0318516_107409132	3300031543	Soil	EHMTFWIDDVAKTLIFSDGQRLRISRFDKSWISASSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEDASMEKT
Ga0307474_107170092	3300031718	Hardwood Forest Soil	VRNRQSHITNKAGQTGSVQVKEHMTFWIDDAAKTFIFSDGRRLRVTRFDKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGFCEDASTEKPE
Ga0306917_113887951	3300031719	Soil	MTNKAGRTGSVQVEEHMTFWIDDAAKTLIFSDGQLLRISRFDKSWISGSGEDIQYEFNRTDRTLTYADSTSKDNVTTTIVGSGRCEDA
Ga0307477_104219551	3300031753	Hardwood Forest Soil	MTDKAGHKGSVQVEEPITFLIDDVAKTVTFSDGRRLRVARFEKSWISANSDDIQYELNRADGTLTYAGSTTKDNLTTTIVGSGHCEKASAG
Ga0307475_105565761	3300031754	Hardwood Forest Soil	MTNKAGQTNSVEVEEHMTFWIDDAAKTFILSDGRRLRISRFDKSWISASSDDIQYEFNRTDRTLSYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0318547_108094941	3300031781	Soil	MRQAEQTRIQLDCASTKVIMTDKAGHKDTVHVEGHMTFLIDDAAKTVTFSDGRPLRIARFDRSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENASAEKT
Ga0307478_104599191	3300031823	Hardwood Forest Soil	MTNKAGQTNSVEVEEHMTFWIDDAAKTFILSDGRRLRISRFDKSWISASSDDIQYEFSRTDRTLSYAGSTTKDNVTTTIVGSGLCEDASTEKPE
Ga0310917_104803002	3300031833	Soil	MTDKAGHKDTVHVEDHMTFLIDDAAKTVTFSDGRPLRIARFDRSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGHCENASAEKT
Ga0310917_107273431	3300031833	Soil	MTNKTGQTGSVQVEEHMTFWIDDAAKTFIFSDGQLLRISRFDKSWISGSSEDIQYEFNRADRTLTYAGSTTKDNVATTIVGSGRCEDASTIKT
Ga0306919_105550152	3300031879	Soil	MTDKAGHKDTVHVEGHMTFLIDDAAKTVTFSDGRPLRIARFDRSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENASAEKT
Ga0306925_103689842	3300031890	Soil	MTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGQRLRISRFDKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEDASMEKT
Ga0306923_105822441	3300031910	Soil	MTDKAGHKDTVHVEDHMTFLIDDAAKTVTFSDGRPLRIARFDRSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENASAEKT
Ga0310912_105824032	3300031941	Soil	MTDKAGHKDTVHVEGHMTFLIDDAAKTVTFSDGRPLRIARFDRSWISANIEDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENASAEKT
Ga0310909_114481331	3300031947	Soil	MTNKTGQTGSVQVEEHMTFWIDDAAKTFIFSDGQRLRISRFDKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVSSGRCEDASMEKT
Ga0306926_107879852	3300031954	Soil	MTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGQLLRISRFDKSWISGSSEDIQYEFNRADHTLTYAGSTSKDNVTTTIVGSGRCEDASTIKT
Ga0306922_114111801	3300032001	Soil	MTNKAGRTGSVQVEEHMTFWIDDAAKTFIFSDGQLLRISRFDKSWISGSSEDIQYEFNRADHTLTYAGSTTKDNVTTTIVSSGRCE
Ga0311301_100215493	3300032160	Peatlands Soil	MSFWIDDAAKSFAFSDGRRLRVTRFDKSWISANSDDTQYEFNRGDGTLTYAGSTAEGNTTTTIVGSGRCEKGTQ
Ga0311301_108041731	3300032160	Peatlands Soil	ILTNKAGQKGSVQVEEHMTFWIDDAAKTFIFSDARRLRVTRFEKSWISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGLCEDASTEKT
Ga0307471_1025809142	3300032180	Hardwood Forest Soil	MTFFIDDAAKTITFSDGRRLRVARFDKSWISANSDDIQYELNRADGTLTYAGSTTKDNLTTTIVGSGHCEKASAG
Ga0307471_1037609211	3300032180	Hardwood Forest Soil	NSVQVEEHMTFWIDDAAKTFIFSDGRRLQVTRFDKSWISASSEDIQYEFNRADRPLTYAGSTTKDNVTTTIVGSGLCEDASTEKTE
Ga0306920_1008347661	3300032261	Soil	VRQAEQTRIQLDCASTKVIMTDKAGHKDTVHVEGHMTFLIDDAAKTVTFSDGRPLRIARFDRSWISANSEDVQYEFNRADGTLTYAGSTTKDNVTTTIIGSGRCENASAEKT
Ga0306920_1017287381	3300032261	Soil	MTNKTGQTGSVQVEEHMTFWIDDAAKTFIFSDGQRLRISRFDKSRISANSEDIQYEFNRADGTLTYAGSTTKDNVTTTIVGSGRCEDASMEKT
Ga0306920_1025839431	3300032261	Soil	MTNKAGKMGSVQVEEHMTFWIDDAAKTFIFSDGQLLRISRFDKSWISGSSEDIQYEFNRADRTLTYAGSTSKDNVTTTIVGSGRCEDASTIKT
Ga0306920_1041442041	3300032261	Soil	LDSVQVEEHMTFLIDDAAKTVIFSDGRRLRVTRFDKSWISANSEDVRYEFNRADGTLTYAGSTTKDNVTTTIIGSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076463

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences