Metagenome / Metatranscriptome Family F076562

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076562
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	84 residues
Representative Sequence	VQPIIPAPGPNGPWRVLILDRDPADPKWILATVATPDEIRPARPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR
Number of Associated Samples	94
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.17 %
% of genes near scaffold ends (potentially truncated)	30.51 %
% of genes from short scaffolds (< 2000 bps)	78.81 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.644 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (13.559 % of family members)
Environment Ontology (ENVO)	Unclassified (30.508 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.373 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.39% β-sheet: 21.24% Coil/Unstructured: 66.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00392	GntR	14.41
PF02518	HATPase_c	4.24
PF00589	Phage_integrase	2.54
PF00496	SBP_bac_5	1.69
PF00196	GerE	1.69
PF13466	STAS_2	1.69
PF13586	DDE_Tnp_1_2	0.85
PF13676	TIR_2	0.85
PF13541	ChlI	0.85
PF03989	DNA_gyraseA_C	0.85
PF02371	Transposase_20	0.85
PF01636	APH	0.85
PF11898	DUF3418	0.85
PF00211	Guanylate_cyc	0.85
PF00872	Transposase_mut	0.85
PF13358	DDE_3	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.85
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.85
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.85
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
All Organisms	root	All Organisms	31.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
cellular organisms	root	All Organisms → cellular organisms	31.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.69 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.85 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.85 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.69 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.85 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.85 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.85 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.85 %
Ornithinimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.69 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.85 %
Ornithinimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium	0.85 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.85 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.85 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	0.85 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.85 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.69 %
unclassified Ornithinimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium	0.85 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.85 %
Amycolatopsis lexingtonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis lexingtonensis	0.85 %
Nakamurella panacisegetis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella panacisegetis	0.85 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.85 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	0.85 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.69 %
Ornithinimicrobium sp. CNJ-824	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium → Ornithinimicrobium sp. CNJ-824	0.85 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.85 %
Amycolatopsis lexingtonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis lexingtonensis	0.85 %
Nakamurella panacisegetis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella panacisegetis	0.85 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.85 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	0.85 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_108084748	Not Available	546	Open in IMG/M
3300005166\|Ga0066674_10205948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	936	Open in IMG/M
3300005175\|Ga0066673_10356130	Not Available	854	Open in IMG/M
3300005332\|Ga0066388_100437571	Not Available	1950	Open in IMG/M
3300005332\|Ga0066388_100634711	Not Available	1685	Open in IMG/M
3300005332\|Ga0066388_106101126	Not Available	608	Open in IMG/M
3300005336\|Ga0070680_102006626	Not Available	501	Open in IMG/M
3300005434\|Ga0070709_10016485	Not Available	4219	Open in IMG/M
3300005434\|Ga0070709_10658951	Not Available	811	Open in IMG/M
3300005435\|Ga0070714_100004642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	10367	Open in IMG/M
3300005435\|Ga0070714_100782259	Not Available	923	Open in IMG/M
3300005436\|Ga0070713_101468760	Not Available	661	Open in IMG/M
3300005436\|Ga0070713_101944866	Not Available	570	Open in IMG/M
3300005439\|Ga0070711_101472768	Not Available	593	Open in IMG/M
3300005457\|Ga0070662_100853058	Not Available	776	Open in IMG/M
3300005544\|Ga0070686_101917932	Not Available	506	Open in IMG/M
3300005553\|Ga0066695_10413373	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300005556\|Ga0066707_10026713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3142	Open in IMG/M
3300005614\|Ga0068856_100053578	All Organisms → cellular organisms → Bacteria	3977	Open in IMG/M
3300005614\|Ga0068856_100069758	Not Available	3476	Open in IMG/M
3300005615\|Ga0070702_101558298	Not Available	545	Open in IMG/M
3300005764\|Ga0066903_105917915	Not Available	641	Open in IMG/M
3300005764\|Ga0066903_107481615	Not Available	564	Open in IMG/M
3300006046\|Ga0066652_100266644	Not Available	1506	Open in IMG/M
3300006163\|Ga0070715_10141936	Not Available	1167	Open in IMG/M
3300006175\|Ga0070712_100295817	Not Available	1308	Open in IMG/M
3300006579\|Ga0074054_11966640	Not Available	611	Open in IMG/M
3300006844\|Ga0075428_100814316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	992	Open in IMG/M
3300006871\|Ga0075434_100170185	All Organisms → cellular organisms → Bacteria	2198	Open in IMG/M
3300006903\|Ga0075426_10014926	All Organisms → cellular organisms → Bacteria → Proteobacteria	5545	Open in IMG/M
3300006904\|Ga0075424_100033803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5302	Open in IMG/M
3300006953\|Ga0074063_12498769	Not Available	522	Open in IMG/M
3300006954\|Ga0079219_11989429	Not Available	552	Open in IMG/M
3300007076\|Ga0075435_100094340	Not Available	2473	Open in IMG/M
3300009012\|Ga0066710_102265377	Not Available	791	Open in IMG/M
3300009012\|Ga0066710_103530233	Not Available	591	Open in IMG/M
3300009098\|Ga0105245_11295138	Not Available	778	Open in IMG/M
3300009137\|Ga0066709_101896461	Not Available	830	Open in IMG/M
3300009162\|Ga0075423_10176980	Not Available	2240	Open in IMG/M
3300009792\|Ga0126374_11283580	Not Available	591	Open in IMG/M
3300010047\|Ga0126382_10065450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2202	Open in IMG/M
3300010301\|Ga0134070_10099934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis lexingtonensis	1011	Open in IMG/M
3300010320\|Ga0134109_10244086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675	Open in IMG/M
3300010358\|Ga0126370_11746061	Not Available	600	Open in IMG/M
3300010359\|Ga0126376_10153831	Not Available	1847	Open in IMG/M
3300010360\|Ga0126372_10369982	Not Available	1294	Open in IMG/M
3300010360\|Ga0126372_11888246	Not Available	642	Open in IMG/M
3300010362\|Ga0126377_12775170	Not Available	564	Open in IMG/M
3300010366\|Ga0126379_10818151	Not Available	1031	Open in IMG/M
3300010371\|Ga0134125_10348545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1643	Open in IMG/M
3300010376\|Ga0126381_101645107	Not Available	928	Open in IMG/M
3300010376\|Ga0126381_103297655	Not Available	637	Open in IMG/M
3300010376\|Ga0126381_103578690	Not Available	609	Open in IMG/M
3300010398\|Ga0126383_10357829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1483	Open in IMG/M
3300010398\|Ga0126383_10360989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1477	Open in IMG/M
3300010401\|Ga0134121_10048781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3468	Open in IMG/M
3300012198\|Ga0137364_10020936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4020	Open in IMG/M
3300012198\|Ga0137364_10124577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1840	Open in IMG/M
3300012198\|Ga0137364_10435344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	983	Open in IMG/M
3300012199\|Ga0137383_11161254	Not Available	557	Open in IMG/M
3300012200\|Ga0137382_10650565	Not Available	754	Open in IMG/M
3300012201\|Ga0137365_10273101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1255	Open in IMG/M
3300012201\|Ga0137365_11003825	Not Available	605	Open in IMG/M
3300012201\|Ga0137365_11199845	Not Available	543	Open in IMG/M
3300012208\|Ga0137376_10270703	Not Available	1473	Open in IMG/M
3300012211\|Ga0137377_10034781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4592	Open in IMG/M
3300012211\|Ga0137377_10159976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2159	Open in IMG/M
3300012211\|Ga0137377_10241232	Not Available	1736	Open in IMG/M
3300012211\|Ga0137377_11099873	Not Available	725	Open in IMG/M
3300012285\|Ga0137370_10567857	Not Available	699	Open in IMG/M
3300012350\|Ga0137372_10033449	All Organisms → cellular organisms → Bacteria	4694	Open in IMG/M
3300012350\|Ga0137372_10044730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3959	Open in IMG/M
3300012958\|Ga0164299_10510333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium → Ornithinimicrobium sp. CNJ-824	802	Open in IMG/M
3300012971\|Ga0126369_10660743	Not Available	1120	Open in IMG/M
3300014968\|Ga0157379_12235355	Not Available	544	Open in IMG/M
3300014969\|Ga0157376_12628224	Not Available	543	Open in IMG/M
3300015371\|Ga0132258_11781414	Not Available	1552	Open in IMG/M
3300016319\|Ga0182033_10164522	Not Available	1729	Open in IMG/M
3300017959\|Ga0187779_10006352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6877	Open in IMG/M
3300018058\|Ga0187766_10121435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1602	Open in IMG/M
3300018060\|Ga0187765_10145083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1335	Open in IMG/M
3300018064\|Ga0187773_10375913	Not Available	816	Open in IMG/M
3300018482\|Ga0066669_10850834	Not Available	812	Open in IMG/M
3300021560\|Ga0126371_10803427	Not Available	1087	Open in IMG/M
3300021560\|Ga0126371_13188362	Not Available	555	Open in IMG/M
3300025914\|Ga0207671_10393642	Not Available	1102	Open in IMG/M
3300025915\|Ga0207693_11116933	Not Available	598	Open in IMG/M
3300025928\|Ga0207700_10625014	Not Available	959	Open in IMG/M
3300025929\|Ga0207664_11355942	Not Available	631	Open in IMG/M
3300025941\|Ga0207711_12015477	Not Available	520	Open in IMG/M
3300025949\|Ga0207667_10575428	Not Available	1137	Open in IMG/M
3300026078\|Ga0207702_10042857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3798	Open in IMG/M
3300026078\|Ga0207702_10045522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3690	Open in IMG/M
3300027909\|Ga0209382_10715252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1076	Open in IMG/M
3300028784\|Ga0307282_10188451	Not Available	984	Open in IMG/M
3300028807\|Ga0307305_10566049	Not Available	507	Open in IMG/M
3300031543\|Ga0318516_10158221	Not Available	1302	Open in IMG/M
3300031544\|Ga0318534_10857801	Not Available	509	Open in IMG/M
3300031680\|Ga0318574_10008117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4628	Open in IMG/M
3300031719\|Ga0306917_10350921	Not Available	1147	Open in IMG/M
3300031736\|Ga0318501_10155989	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300031778\|Ga0318498_10067307	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300031819\|Ga0318568_10232023	Not Available	1141	Open in IMG/M
3300031860\|Ga0318495_10426784	Not Available	583	Open in IMG/M
3300031896\|Ga0318551_10184332	Not Available	1150	Open in IMG/M
3300032043\|Ga0318556_10688545	Not Available	532	Open in IMG/M
3300032054\|Ga0318570_10474215	Not Available	571	Open in IMG/M
3300032055\|Ga0318575_10356785	Not Available	741	Open in IMG/M
3300032174\|Ga0307470_10855573	Not Available	710	Open in IMG/M
3300032205\|Ga0307472_100560170	Not Available	1000	Open in IMG/M
3300032770\|Ga0335085_10091101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3971	Open in IMG/M
3300032770\|Ga0335085_11279756	Not Available	775	Open in IMG/M
3300032805\|Ga0335078_10896941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella panacisegetis	1065	Open in IMG/M
3300032805\|Ga0335078_12751512	Not Available	500	Open in IMG/M
3300032828\|Ga0335080_11466191	Not Available	676	Open in IMG/M
3300032892\|Ga0335081_10292354	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.90%
Host-Associated	Host-Associated	16.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.90%
Plants	Host-Associated → Plants	16.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.08%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.63%
Loam	Environmental → Terrestrial → Soil → Loam	17.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.39%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1080847481	3300000956	Soil	MSHPALHPWRVLILDREHGDPKWILTTVATPADVRPARPGATVDEATTAWVASAAGLFHPALTPLPGALCWRVDEGSKQR
Ga0066674_102059482	3300005166	Soil	VQPIIPAPGPNGPWRVLILDGDPADPKWILATVATPDDIWPARPGATVDEVTAAWVASAAGLFRPSLTPLPGALCWRVDEGGKQR*
Ga0066673_103561301	3300005175	Soil	MPNDPTTTGNGPWRILVLDRDPADPKWILATVATPGDVRPVWPSGTVDEDTAAWVATATGLYQPALTRLRHVDVWRIDEQPQEN*
Ga0066388_1004375714	3300005332	Tropical Forest Soil	VQPIIPALGPHGPWRVLILDRDPADPKWILATIATPDEIRPARPHATVDEVTAAWVASAAGLFHPELTPLPGALAWRVDEGGKPR*
Ga0066388_1006347111	3300005332	Tropical Forest Soil	VPPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVEEVTAAWVASAAGLFRPTLTPLPGALAWRVDEGSKPR*
Ga0066388_1061011262	3300005332	Tropical Forest Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPAHPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGG
Ga0070680_1020066261	3300005336	Corn Rhizosphere	MPNDPTTTGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATGLYRPVLTRLRHADVWRID
Ga0070709_100164858	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDPTTTGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATGLYRPVLTRLRHADVWRIDEQPQEN*
Ga0070709_106589511	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSHPALHPWRVLILDREHGDPKWILATVAAPRDVRPARDGADVDEVTQRWVASAAGLYQPALTPMPGAHVWRVDEGERQR*
Ga0070714_1000046425	3300005435	Agricultural Soil	VQPIIPASGTNGPWRVLILDRDLADPKWILATIATPDEIRPAPPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR*
Ga0070714_1007822592	3300005435	Agricultural Soil	MSDPSTAPPGRNGPWRVLILDRDPDDPKWIVATVVELADMRPAGPGAAVDEVTTAWVAGRAGLARAALTPLPGALAWRVE*
Ga0070713_1014687601	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSDPSTAPPGRNGPWRVLILDRDPDDPKWIVATVVELADVRPAGPGAAVDEVTTAWVAGRAGLARAALTPLPGALAWRVE*
Ga0070713_1019448661	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDPTTTGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATGLYRPVLTRLR
Ga0070711_1014727682	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSHDSTSSSNGPWRLLILDRSADDPKWILATVATPGDVRPADAAGAVLDEVTIAWVAAAVGLYRTALTPLRHAD
Ga0070662_1008530582	3300005457	Corn Rhizosphere	MSHPALHPWRVLILDREHGDPKWILATVAAPRDVRPARDGADVDEVTQRWVASAAGLYQPALTPMPGAHVWRVDEGGRQR*
Ga0070686_1019179321	3300005544	Switchgrass Rhizosphere	MPNDPTTTGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATGLYRPVLTRLRHADVWR
Ga0066695_104133731	3300005553	Soil	MPNDPTTTGNGPWRLLILDRDPADPKWILATVATPGDVRPAWPSGTVDEDTAAWVAMATGLYRPALTRLRHADVWRIDEQPQEN*
Ga0066707_100267132	3300005556	Soil	VQPIIPAPGPNGPWRVLILDGDPADPKWILATVATPDDIRPARPGATVDEVTAAWVASAAGLFRPALTPLPGALCWRVDEGGKQR*
Ga0068856_1000535782	3300005614	Corn Rhizosphere	MPNDPTTTGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIATATGLYRPVLTRLRHADVWRIDEQPQEN*
Ga0068856_1000697581	3300005614	Corn Rhizosphere	VQPIIPASGTNGPWRVLILDRDLADPKWILATIATPDEIRPAPPDATVDEVTAAWVASVAGLSRPSLTPLPGALAWRVDEGGDPR*
Ga0070702_1015582981	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIATATGLYRPVLTRLRHADVWRIDEQPQEN*
Ga0066903_1059179151	3300005764	Tropical Forest Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATLDEIRPARPDATMDEVTTAWVASAAGLLRPALTPLPGALAWRVDEAGKPR*
Ga0066903_1074816151	3300005764	Tropical Forest Soil	VQPIIPAPGPKGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVIAVWVASATGLFRPALTPLPGALTWRVDEGGKPR*
Ga0066652_1002666441	3300006046	Soil	PNDPTTTGNGPWRILVLDRDPADPKWILATVATPGDVRPVWPSGTVDEDTAAWVATATGLYQPALTRLRHVDVWRIDEQPQEN*
Ga0070715_101419362	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDPTTIGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATGLYRPVLTRLRHADVWRIDEQPQEN*
Ga0070712_1002958171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATSDEIRPAHPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGMPR*
Ga0074054_119666401	3300006579	Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPAHPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGMPR*
Ga0075428_1008143162	3300006844	Populus Rhizosphere	MSHPALHPWRVLILDCEHGDPKWILATVFDPADVRPARDGDDGVDEVTWRWVASASGLWQPELTPMPGATVWRVDEGDKPR*
Ga0075434_1001701852	3300006871	Populus Rhizosphere	MTHPALHPWRILILDRERGDPKWILATVATPDDVRPARPGATVDEVTTAWVASAASLFHPALTPLLSALCWRVDEGR*
Ga0075426_100149268	3300006903	Populus Rhizosphere	MPNDPTTIGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIATATGLYRPVLTRLRHADVWRIDEQPQEN*
Ga0075424_1000338033	3300006904	Populus Rhizosphere	MLILDRERGDPKWILATVATPGDNGPLVDAIVDEVTAAWVARPAGLFHPALTSLPGALCWRVDEGSKQRRRWIAPGIGR*
Ga0074063_124987691	3300006953	Soil	ILDRDPADPKWILATIATPDEIRPAHPDAAVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR*
Ga0079219_119894291	3300006954	Agricultural Soil	RYPGADRKQVPAMPNDPTTTGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATGLYRPVLTRLRHADVWRIDEQPQEN*
Ga0075435_1000943401	3300007076	Populus Rhizosphere	MPNDPTTTGNGPWRLLILDRGPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATGLYRPVLTRLRHADVWRIDEQPQEN*
Ga0066710_1022653772	3300009012	Grasslands Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATVATPDDIRPARAGATVDEMTAAWMASAAGLLHPAFTPLPGALAWRVDEGGKQR
Ga0066710_1035302331	3300009012	Grasslands Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR
Ga0105245_112951381	3300009098	Miscanthus Rhizosphere	GLVSAMSHPAPITGPWRILILDRERGDPKWILATVAAPRDVRPARDGADVDEVTQRWVASAAGLYQPALTPMPGAHVWRVDEGGRQR*
Ga0066709_1018964611	3300009137	Grasslands Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATVATPDDIRPARAGATVDEMTPAWMASAAGLLHPALTPLPGALAWRVDEGEKQR*
Ga0075423_101769802	3300009162	Populus Rhizosphere	MPNDPTTTGNGPWRQLILDRGPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATGLYRPVLTRLRHADVWRIDEQPQEN*
Ga0126374_112835801	3300009792	Tropical Forest Soil	VQPIIPAPGPSGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVTAAWVASAAGLFHPELTPLPGALAWRVDEGGKPR*
Ga0126382_100654502	3300010047	Tropical Forest Soil	VQPIIPAPGPNSPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGNPR*
Ga0134070_100999342	3300010301	Grasslands Soil	MSNSPTTTGNGPWRILVLDRDPTDPKWILATVGAPADVWPARPGATVDEMTAAWVASASGLHRPALTPLPGALAWRVDEGGNPR*
Ga0134109_102440862	3300010320	Grasslands Soil	GPWRILVLDRDPADPKWILATVATPGDVRPIWPSGTVDEDTAAWVATATGLYQPALTRLRHVDVWRIDEQPQEN*
Ga0126370_117460611	3300010358	Tropical Forest Soil	ITLLEGSPVQPIIPAPGPSGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVTAAWVASAAGLFHPELTPLPGALAWRVDEGGKPR*
Ga0126376_101538311	3300010359	Tropical Forest Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPAHPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR*
Ga0126372_103699822	3300010360	Tropical Forest Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPARPDANVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEEGKPR*
Ga0126372_118882461	3300010360	Tropical Forest Soil	VQPIIPAPGPHGPWRVLILDRDPADPKWILATIATLDEIRPARPDATMDEVTTAWVASAAGLLRPALTPLPGALAWRVDEAGKPR*
Ga0126377_127751701	3300010362	Tropical Forest Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPASPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR*
Ga0126379_108181511	3300010366	Tropical Forest Soil	MQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVTTAWVASAAGLFRPALTPLPGALAWRVDEGGKPR*
Ga0134125_103485451	3300010371	Terrestrial Soil	ILDRDLADPKWILATIATPDEIRPAPPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR*
Ga0126381_1016451071	3300010376	Tropical Forest Soil	PGPSGSPCSEGSPVQPIIPAPGPHGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVTAVWVASAAGLFRPALTPLPGALAWRVDEEGKPR*
Ga0126381_1032976551	3300010376	Tropical Forest Soil	VQPIIPAPGPSGPWRVLILDRDPADPKWILATIATPGEIRPARPDATVDQVTAAWVASAAGLSRPVLTPLPGALAWRVDEGGKPR*
Ga0126381_1035786901	3300010376	Tropical Forest Soil	VPPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVTAAWVASAAGLFRPTLTPLPGALAWRVDEGGKPR*
Ga0126383_103578291	3300010398	Tropical Forest Soil	NGPWRVLILDRDPADPKWILATIATPDEIRPAHPDATVDEVTAAWVASAAGLSQPRAHTPAGALAWRVDEGGKPRL*
Ga0126383_103609891	3300010398	Tropical Forest Soil	PMNDLPTANGIWRLLIFDPDPADPKWILATVATPNDIRPARPDATVDEVTAAWVAAAADLSRPALTPLPGASCWRIDEGGEPR*
Ga0134121_100487813	3300010401	Terrestrial Soil	MPNDPTTTGNGPWRLLILDRDPADPKWILATVATPGDVRPAWPSGTVDEDTAAWIAMATGLYRPVLTRLRHADVWRIDEQPQEN*
Ga0137364_100209364	3300012198	Vadose Zone Soil	MPNDPNTTGNGPWRLLILDREPADPKWILATVATPGDVRPAWPSGTVDEDTAAWVAMATGLYRPALTRLRHADVWRIDEQPQET*
Ga0137364_101245772	3300012198	Vadose Zone Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWIVATIATPDEIRPARPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR*
Ga0137364_104353441	3300012198	Vadose Zone Soil	VQPIIPAPGPNGPWRVLILDRNPADPKWILATVATPDDIRPARAGATVDEMTPAWMASAAGLLHPALTPLPGALAWRVDEGEKQR*
Ga0137383_111612541	3300012199	Vadose Zone Soil	VQPIIPAPGPNGPWRVLILDGDPADPKWILATVATPGDIRPARPDATVDEVTAAWVASAAGMFHPTLTPLPGALCWRVDEGGKQR*
Ga0137382_106505651	3300012200	Vadose Zone Soil	MPNDPNTTGNGPWRLLILDREPADPKWILATVATPGDVRPAWPSGTVDEDTAAWVAMATGLYRPALTRLRHADVWRIDEQPQEN*
Ga0137365_102731012	3300012201	Vadose Zone Soil	VEPIIPAPGPNGPWRVLILDRDPADPKWILATVASPGDVRPALPGATVDEMIAAWVASAAGLFRPALAPLPGALAWRVDEGDERDRPAG*
Ga0137365_110038252	3300012201	Vadose Zone Soil	MPNHPTTSRTGPWRILVLDHDPTDPKWILATVATPADVRPARPGATVDEVTAAWVASAAGLHRPALTPLPGALAWRVAEGEKPR*
Ga0137365_111998451	3300012201	Vadose Zone Soil	VPAMSNDRTSPGYHTSSNGPWRVLILDRDPADPKWILTTVASPGDVRPAYPGATVDEVTAAWVASAAGLSRPALTPVPGALCWRVDEGGKQR*
Ga0137376_102707031	3300012208	Vadose Zone Soil	MPNDPTTTGNGPWRLLILDREPADPKWILATVATPGDVRPAWPSGTVDEDTAAWVAMATGLYRPALTRLRHADVWRIDEQPQET*
Ga0137377_100347811	3300012211	Vadose Zone Soil	MPNDPTTTGNGPWRLLILDRDPADPKWILATVATPGDVRPAWPSGTVDEDTAAWVAMATGLYRPALTRLRHADVWRIGEQPQEN*
Ga0137377_101599761	3300012211	Vadose Zone Soil	VQPIIPAPGPNGLWRVLILDRDPADPKWILATVATPGDIRPARPDATVDEVTAAWAASAAGLFHPTLTPLPGALCWRVDEGGKQR*
Ga0137377_102412321	3300012211	Vadose Zone Soil	PTTTGNGPWRLLILDRDSADPKWILATIATPGDVRPAWPSGTVDEDTAAWVATATGLYRPALTRLRHADVWRIDEQPQEN*
Ga0137377_110998731	3300012211	Vadose Zone Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATSDEIRPARPDAIVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR*
Ga0137370_105678571	3300012285	Vadose Zone Soil	MPNDPTTTSNGPWRLLILDREPADPKWILATVATPGDVRPAWPSGTVDEDTAAWVAMATGLYRPALTRLRHADVWRIDEQPQEN*
Ga0137372_100334494	3300012350	Vadose Zone Soil	MPGSSHAGKADLPRGSPAAGPNGPWRVLILDRDPADPKWILATVATPDDIRPARPGVTVDEVTAAWVASAAGLFHPALTSLPGALCWRADEGSKQR*
Ga0137372_100447302	3300012350	Vadose Zone Soil	MSNDRTSPGYHTSSNGPWRVLILDRDPADPKWILTTVASPGDVRPAYPGATVDEVTAAWVASAAGLSRPALTPVPGALCWRVDEGGKQR*
Ga0164299_105103332	3300012958	Soil	MSHDSTSSSNGPWRLLILDRSADDPKWILATVATPGDVRPAHAAGAVLDEVTIAWVAAAVGLYRAALTPLRHADVWRVDEGGRPW*
Ga0126369_106607432	3300012971	Tropical Forest Soil	VQPIIPAPGPKGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVIAAWVASATGLFRPALTPLPGALTWRVDEGGKPR*
Ga0157379_122353551	3300014968	Switchgrass Rhizosphere	MPNDPTTIGNEPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIATATGLYRPVLTRLRHADVWRIDEQPQEN*
Ga0157376_126282241	3300014969	Miscanthus Rhizosphere	MPNDPTTTGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATRLYRPVLTRLRHADVWRIDEQPQEN*
Ga0132258_117814141	3300015371	Arabidopsis Rhizosphere	MPNDPTTTGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATGLYRPVLTRLRHADVWHIDEQPQEN*
Ga0182033_101645221	3300016319	Soil	GSPVEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALRRPQGDR
Ga0187779_100063523	3300017959	Tropical Peatland	VQPIIPAPGPNGPWRVLILDRDPADPKWILATVATPDEIRPARPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR
Ga0187766_101214353	3300018058	Tropical Peatland	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPARPDATLDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR
Ga0187765_101450832	3300018060	Tropical Peatland	VQPIIPAPGPNGPWRVLILDRDAADPKWILATIATPDEIRPGRSDATVDEVTAAWVASAAGLFRPALTPLPGALVWRVDEGGKPR
Ga0187773_103759132	3300018064	Tropical Peatland	VQPIIPTPGPNGPWRVLILDRDPADPKWILATIATPDEIRPASPDATVDEVTAAWVTSAAGLFRPALTPLPGALAWRVDEEGKPR
Ga0066669_108508341	3300018482	Grasslands Soil	MPNDPTTTGNGPWRILVLDRDPADPKWILATVATPGDVRPVWPSGTVDEDTAAWVATATGLYQPALTRLRHVDVWRIDEQPQEN
Ga0126371_108034272	3300021560	Tropical Forest Soil	VQPIIPAPGPHGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDQVTAAWVASAAGLSRPVLTPLPGALAWRVDEGGKPR
Ga0126371_131883621	3300021560	Tropical Forest Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVTTAWVASAAGLFRPALTPLPGALAWRVDEEGKPR
Ga0207671_103936421	3300025914	Corn Rhizosphere	MPNDPTTTGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIAMATDLYRPVLTRLRHADVWRIDEQPQEN
Ga0207693_111169331	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPASPDATVDEVTTAWVASAAGLFRPALTPLPGALAWRVDKG
Ga0207700_106250142	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSDPSTAPPGRNGPWRVLILDRDPDDPKWIVATVVELADVRPAGPGAAVDEVTTAWVAGRAGLARAALTPLPGALAWRVE
Ga0207664_113559421	3300025929	Agricultural Soil	MSHDSTSSSNGPWRLLILDRSADDPKWILATVATPGDVRPADAAGAVLDEVTIAWVAAAVGLYRTALTPLRHADVWRVDEGR
Ga0207711_120154771	3300025941	Switchgrass Rhizosphere	VLILDRDLADPKWILATIATPDEIRPAPPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDEGGKPR
Ga0207667_105754282	3300025949	Corn Rhizosphere	MSHPALHPWRVLILDREHGDPKWILATVAAPRDVRPARDGADVDEVTQRWVASAAGLYQPALTPMPGAHVWRVDEGGRQR
Ga0207702_100428573	3300026078	Corn Rhizosphere	MPNDPTTTGNGPWRLLILDRDPADPKWILATIATPGDVRPAWPSGTVDEDTAAWIATATGLYRPVLTRLRHADVWRIDEQPQEN
Ga0207702_100455221	3300026078	Corn Rhizosphere	VQPIIPASGTNGPWRVLILDRDLADPKWILATIATPDEIRPAPPDATVDEVTAAWVASAAGLFRPALTP
Ga0209382_107152522	3300027909	Populus Rhizosphere	MSHPALHPWRVLILDCEHGDPKWILATVFDPADVRPARDGDDGVDEVTWRWVASASGLWQPELTPMPGATVWRVDEGDKPR
Ga0307282_101884512	3300028784	Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVTTAWVASAAGLFRPALTPLPGALAWRVDEGGKPR
Ga0307305_105660491	3300028807	Soil	MPNDPTTGNGPWRLLILDRDPADPKWILATVATPGDVRPAWPSGTVDEDTAAWVAMATGLYRPALTRLRRADVWRIDEQPQET
Ga0318516_101582214	3300031543	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALRRPQGDR
Ga0318534_108578011	3300031544	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALRHPQGDR
Ga0318561_102569271	3300031679	Soil	LILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALRRPQGDR
Ga0318574_100081174	3300031680	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAARLFHPVLAPLPGALAWRVDEGGNALRRPQGDR
Ga0306917_103509211	3300031719	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAARLFHPVLAPLPGALAWRVDEGGNALR
Ga0318501_101559891	3300031736	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALRRPQ
Ga0318498_100673073	3300031778	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALRHPQ
Ga0318568_102320232	3300031819	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALRHPQGD
Ga0318517_101346332	3300031835	Soil	LILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALRHPQGDR
Ga0318495_104267841	3300031860	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAARLFHPVLAPLPGALAWRVDEGGNALRHPQGDR
Ga0318551_101843322	3300031896	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNAL
Ga0318556_106885451	3300032043	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALRRPQGD
Ga0318570_104742151	3300032054	Soil	WRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALRRPQGDR
Ga0318575_103567852	3300032055	Soil	VEPIIPALPGTNGPWRILILDRDPADPKWILATVATPGDVRPARPGAAVDEVTAAWVASAAGLFHPVLAPLPGALAWRVDEGGNALR
Ga0307470_108555732	3300032174	Hardwood Forest Soil	SPGPDREEPSAMSHPALHPWRVLILDREHGDPKWILATVAAPRDVRPARDGADVDEVTQRWVASAAGLYQPALTPMPGAHVWRVDEGERQR
Ga0307472_1005601701	3300032205	Hardwood Forest Soil	MSHPALHPWRVLILDREHGDPKWILATVAAPRDVRPARDGADVDEVTQRWVASAAGLYQPALTPMPGAHVWRVDEGERQR
Ga0335085_100911013	3300032770	Soil	VEPIIPAPPATNGPWRLLIFDPDPADPKWILATVATPNDIRPARPCATEDEVTAAWVASAADLSRPALTPLPGASCWRVDEGGKPR
Ga0335085_112797561	3300032770	Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPAHPDATVDEVTTAWVASAAGLFRPALTPLP
Ga0335078_108969412	3300032805	Soil	PVQPIIPAPVPKGPWRVLILDRDPADPKWILATIATPDEIRPARPDTTVDEVTAAWVASTTGLFRLALTPLPGALAWRVDEGGKPR
Ga0335078_127515121	3300032805	Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPARPDATVDEVTAAWVASAAGLFRPALTPLPGALAWRVDERGKPR
Ga0335080_114661911	3300032828	Soil	APGPNGPWRVLILDRDPADPKWILATIATPDEIRPAHPDATVDEVTTAWVASAAGLFRPALTPLPGALAWRVDEGGKPR
Ga0335081_102923544	3300032892	Soil	VQPIIPAPGPNGPWRVLILDRDPADPKWILATIATPDEIRPAHPDATVDEVTTAWVASAAGLFRPALTPLPGALAWRVDEGGKPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076562

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences