Metagenome / Metatranscriptome Family F076859

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076859
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	81 residues
Representative Sequence	MARKFDIRRSMHKDMLYGALLELSQNARVWHESTVSPEYSHLTEDGQKAIIHVVEEMFRGLQTIHKQEVKEEAKRQTLESLK
Number of Associated Samples	65
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.52 %
% of genes near scaffold ends (potentially truncated)	25.64 %
% of genes from short scaffolds (< 2000 bps)	51.28 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (43.590 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (13.675 % of family members)
Environment Ontology (ENVO)	Unclassified (27.350 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (65.812 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.18% β-sheet: 3.64% Coil/Unstructured: 38.18%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF14743	DNA_ligase_OB_2	32.48
PF01027	Bax1-I	11.97
PF01503	PRA-PH	10.26
PF00574	CLP_protease	6.84
PF00149	Metallophos	2.56
PF04055	Radical_SAM	1.71
PF02668	TauD	1.71
PF02562	PhoH	0.85
PF00106	adh_short	0.85
PF01145	Band_7	0.85
PF00293	NUDIX	0.85
PF00583	Acetyltransf_1	0.85
PF07733	DNA_pol3_alpha	0.85
PF13186	SPASM	0.85
PF00596	Aldolase_II	0.85
PF05050	Methyltransf_21	0.85
PF13385	Laminin_G_3	0.85
PF01467	CTP_transf_like	0.85
PF01521	Fe-S_biosyn	0.85
PF02169	LPP20	0.85
PF03721	UDPG_MGDP_dh_N	0.85
PF13640	2OG-FeII_Oxy_3	0.85
PF00166	Cpn10	0.85
PF04325	DUF465	0.85
PF01176	eIF-1a	0.85
PF07883	Cupin_2	0.85
PF03851	UvdE	0.85
PF00782	DSPc	0.85
PF01844	HNH	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	13.68
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	13.68
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	6.84
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.71
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.85
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	0.85
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.85
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.85
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.85
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.85
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.85
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.85
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	0.85
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.41 %
Unclassified	root	N/A	43.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.59 %
Viruses	superkingdom	All Organisms → Viruses	39.32 %
cellular organisms	root	All Organisms → cellular organisms	17.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.59 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	29.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.59 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	29.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.59 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	29.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.59 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	29.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.59 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	24.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.71 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.59 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	24.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1.71 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002447\|JGI24768J34885_10003439	All Organisms → cellular organisms → Bacteria	5159	Open in IMG/M
3300003393\|JGI25909J50240_1023647	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1395	Open in IMG/M
3300003754\|Ga0005853_1020928	All Organisms → cellular organisms → Bacteria	3096	Open in IMG/M
3300004096\|Ga0066177_10484443	Not Available	545	Open in IMG/M
3300004112\|Ga0065166_10014667	All Organisms → cellular organisms → Bacteria	2198	Open in IMG/M
3300004112\|Ga0065166_10478852	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	526	Open in IMG/M
3300004112\|Ga0065166_10496047	Not Available	517	Open in IMG/M
3300004240\|Ga0007787_10001285	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8537	Open in IMG/M
3300004240\|Ga0007787_10018221	Not Available	2917	Open in IMG/M
3300005582\|Ga0049080_10070325	Not Available	1200	Open in IMG/M
3300005662\|Ga0078894_10000212	Not Available	38515	Open in IMG/M
3300005662\|Ga0078894_10038261	All Organisms → cellular organisms → Bacteria	3998	Open in IMG/M
3300005662\|Ga0078894_10523690	All Organisms → Viruses	1062	Open in IMG/M
3300005662\|Ga0078894_11589774	Not Available	540	Open in IMG/M
3300005805\|Ga0079957_1121099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1383	Open in IMG/M
3300005941\|Ga0070743_10000010	Not Available	61005	Open in IMG/M
3300008107\|Ga0114340_1000100	Not Available	61363	Open in IMG/M
3300008107\|Ga0114340_1000638	Not Available	45332	Open in IMG/M
3300008107\|Ga0114340_1001546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14056	Open in IMG/M
3300008107\|Ga0114340_1022838	All Organisms → cellular organisms → Bacteria → Proteobacteria	2931	Open in IMG/M
3300008108\|Ga0114341_10000070	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	215349	Open in IMG/M
3300008108\|Ga0114341_10001913	Not Available	43123	Open in IMG/M
3300008108\|Ga0114341_10028653	All Organisms → cellular organisms → Bacteria → Proteobacteria	3832	Open in IMG/M
3300008108\|Ga0114341_10370461	Not Available	709	Open in IMG/M
3300008110\|Ga0114343_1000179	Not Available	60110	Open in IMG/M
3300008113\|Ga0114346_1018177	All Organisms → cellular organisms → Bacteria	3834	Open in IMG/M
3300008259\|Ga0114841_1092857	All Organisms → Viruses	1333	Open in IMG/M
3300008261\|Ga0114336_1367427	Not Available	510	Open in IMG/M
3300009419\|Ga0114982_1002324	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8383	Open in IMG/M
3300009419\|Ga0114982_1003725	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6197	Open in IMG/M
3300009419\|Ga0114982_1004207	Not Available	5744	Open in IMG/M
3300009419\|Ga0114982_1023057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2057	Open in IMG/M
3300009419\|Ga0114982_1042091	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1455	Open in IMG/M
3300009419\|Ga0114982_1165479	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	683	Open in IMG/M
3300010354\|Ga0129333_10000014	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	110283	Open in IMG/M
3300010354\|Ga0129333_10000020	Not Available	91225	Open in IMG/M
3300010354\|Ga0129333_10042788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4258	Open in IMG/M
3300010354\|Ga0129333_10088232	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2870	Open in IMG/M
3300010354\|Ga0129333_10380261	Not Available	1252	Open in IMG/M
3300010354\|Ga0129333_10995657	Not Available	705	Open in IMG/M
3300010354\|Ga0129333_11736689	Not Available	507	Open in IMG/M
3300010370\|Ga0129336_10730135	Not Available	523	Open in IMG/M
3300010374\|Ga0114986_1095116	All Organisms → Viruses	539	Open in IMG/M
3300010388\|Ga0136551_1001668	Not Available	5639	Open in IMG/M
3300010388\|Ga0136551_1009938	Not Available	1992	Open in IMG/M
3300010388\|Ga0136551_1091044	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	536	Open in IMG/M
3300012346\|Ga0157141_1000167	Not Available	28518	Open in IMG/M
3300012346\|Ga0157141_1006925	All Organisms → Viruses	1728	Open in IMG/M
3300012352\|Ga0157138_1008678	All Organisms → Viruses → Predicted Viral	1684	Open in IMG/M
3300012663\|Ga0157203_1001221	Not Available	6467	Open in IMG/M
3300012663\|Ga0157203_1018839	Not Available	1024	Open in IMG/M
3300012664\|Ga0157497_1017043	Not Available	992	Open in IMG/M
3300012664\|Ga0157497_1032523	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	672	Open in IMG/M
3300012665\|Ga0157210_1001680	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6532	Open in IMG/M
3300012665\|Ga0157210_1003852	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3316	Open in IMG/M
3300012665\|Ga0157210_1005410	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2602	Open in IMG/M
3300012667\|Ga0157208_10000002	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	98325	Open in IMG/M
3300012667\|Ga0157208_10000172	Not Available	21862	Open in IMG/M
3300012933\|Ga0157211_1000122	Not Available	16675	Open in IMG/M
3300014050\|Ga0119952_1029418	Not Available	1697	Open in IMG/M
3300014960\|Ga0134316_1039467	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	539	Open in IMG/M
3300017766\|Ga0181343_1093659	All Organisms → Viruses	856	Open in IMG/M
3300020160\|Ga0211733_10662662	Not Available	1439	Open in IMG/M
3300020528\|Ga0208224_1016983	All Organisms → Viruses	1045	Open in IMG/M
3300021091\|Ga0194133_10021101	All Organisms → cellular organisms → Bacteria	6454	Open in IMG/M
3300021093\|Ga0194123_10531582	Not Available	518	Open in IMG/M
3300021956\|Ga0213922_1045423	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	995	Open in IMG/M
3300021956\|Ga0213922_1064651	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	785	Open in IMG/M
3300021956\|Ga0213922_1118834	Not Available	522	Open in IMG/M
3300021962\|Ga0222713_10047007	All Organisms → cellular organisms → Bacteria → Proteobacteria	3326	Open in IMG/M
3300021962\|Ga0222713_10062426	Not Available	2792	Open in IMG/M
3300021963\|Ga0222712_10147314	Not Available	1592	Open in IMG/M
3300021963\|Ga0222712_10210851	All Organisms → Viruses	1265	Open in IMG/M
3300021963\|Ga0222712_10408607	Not Available	823	Open in IMG/M
3300022179\|Ga0181353_1100607	Not Available	711	Open in IMG/M
3300022591\|Ga0236341_1000030	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	79770	Open in IMG/M
3300022748\|Ga0228702_1143514	Not Available	524	Open in IMG/M
3300023311\|Ga0256681_10068222	Not Available	14691	Open in IMG/M
3300024289\|Ga0255147_1000008	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	241027	Open in IMG/M
3300024289\|Ga0255147_1000161	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	28063	Open in IMG/M
3300024289\|Ga0255147_1022261	Not Available	1322	Open in IMG/M
3300024289\|Ga0255147_1048788	Not Available	826	Open in IMG/M
3300024298\|Ga0255178_1035532	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300024298\|Ga0255178_1062696	Not Available	709	Open in IMG/M
3300024346\|Ga0244775_10000225	Not Available	74893	Open in IMG/M
3300024351\|Ga0255141_1000258	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17425	Open in IMG/M
3300024357\|Ga0255165_1020413	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300024495\|Ga0255164_1058538	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	610	Open in IMG/M
3300024496\|Ga0255151_1069890	Not Available	562	Open in IMG/M
3300024504\|Ga0255179_1001373	All Organisms → cellular organisms → Bacteria → Proteobacteria	4540	Open in IMG/M
3300024515\|Ga0255183_1027802	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1342	Open in IMG/M
3300027418\|Ga0208022_1024034	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1416	Open in IMG/M
3300027697\|Ga0209033_1077511	All Organisms → Viruses → Predicted Viral	1128	Open in IMG/M
3300027710\|Ga0209599_10000002	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	299582	Open in IMG/M
3300027710\|Ga0209599_10003732	Not Available	5751	Open in IMG/M
3300027710\|Ga0209599_10013801	All Organisms → Viruses → Predicted Viral	2390	Open in IMG/M
3300027710\|Ga0209599_10017529	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300027710\|Ga0209599_10035903	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1335	Open in IMG/M
3300027710\|Ga0209599_10124914	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	680	Open in IMG/M
3300027732\|Ga0209442_1001150	Not Available	15112	Open in IMG/M
3300027797\|Ga0209107_10133133	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1290	Open in IMG/M
3300027804\|Ga0209358_10012481	Not Available	5573	Open in IMG/M
3300027836\|Ga0209230_10002848	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7180	Open in IMG/M
3300027836\|Ga0209230_10027539	All Organisms → cellular organisms → Bacteria → Proteobacteria	2817	Open in IMG/M
3300027836\|Ga0209230_10118825	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300028025\|Ga0247723_1031676	All Organisms → Viruses → Predicted Viral	1658	Open in IMG/M
3300028103\|Ga0255172_1069831	Not Available	635	Open in IMG/M
3300031758\|Ga0315907_10099892	All Organisms → cellular organisms → Bacteria → Proteobacteria	2488	Open in IMG/M
3300031784\|Ga0315899_10001326	Not Available	28455	Open in IMG/M
3300031784\|Ga0315899_10002332	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21055	Open in IMG/M
3300031784\|Ga0315899_10215210	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1930	Open in IMG/M
3300031784\|Ga0315899_11119391	Not Available	689	Open in IMG/M
3300031784\|Ga0315899_11585461	Not Available	544	Open in IMG/M
3300031857\|Ga0315909_10040554	All Organisms → cellular organisms → Bacteria → Proteobacteria	4408	Open in IMG/M
3300031857\|Ga0315909_10365621	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1048	Open in IMG/M
3300034071\|Ga0335028_0011535	Not Available	6178	Open in IMG/M
3300034103\|Ga0335030_0764139	Not Available	571	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	88.03%
Terrestrial	Environmental → Terrestrial	11.97%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	74.36%
Marine	Environmental → Aquatic → Marine	13.68%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	11.97%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	20.51%
Lake	Environmental → Aquatic → Freshwater → Lake	17.95%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	11.97%
Lotic	Environmental → Aquatic → Freshwater → Lotic	11.11%
River	Environmental → Aquatic → Freshwater → River	11.11%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.84%
Coastal	Environmental → Aquatic → Marine → Coastal	6.84%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.98%
Creek	Environmental → Aquatic → Freshwater → Creek	3.42%
Pond	Environmental → Aquatic → Freshwater → Pond	2.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	17.95%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	17.95%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	11.97%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	11.11%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	11.11%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.98%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	2.56%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.71%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.85%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.85%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	13.68%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	11.11%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	11.11%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	11.11%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	10.26%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.84%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	6.84%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.27%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	3.42%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.42%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	3.42%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	2.56%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.71%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.71%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.85%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.85%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.85%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.85%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.85%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	0.85%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.85%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003754	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010374	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S-1-Day17	Environmental	Open in IMG/M
3300010388	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV, may 2015	Environmental	Open in IMG/M
3300012346	Freshwater microbial communities from Emily Creek, Ontario, Canada - S29	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012664	Freshwater microbial communities from Zephyr Creek, Ontario, Canada - S17	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300012667	Freshwater microbial communities from Maskinonge River, Ontario, Canada - S15	Environmental	Open in IMG/M
3300012933	Freshwater microbial communities from Tributary to Mariposa, Ontario, Canada - S7	Environmental	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300014960	Surface water microbial communities from Bangladesh - BaraHaldiaSW0709	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020528	Freshwater microbial communities from Lake Mendota, WI - 26OCT2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021093	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015023 Mahale A surface	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022591	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S2	Environmental	Open in IMG/M
3300022748	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MG	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300024289	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h	Environmental	Open in IMG/M
3300024298	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepC_8d	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024351	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_0h	Environmental	Open in IMG/M
3300024357	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8d	Environmental	Open in IMG/M
3300024495	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8d	Environmental	Open in IMG/M
3300024496	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8h	Environmental	Open in IMG/M
3300024504	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepA_8d	Environmental	Open in IMG/M
3300024515	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8d	Environmental	Open in IMG/M
3300027418	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 (SPAdes)	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028103	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8d	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24768J34885_100034399	3300002447	Freshwater And Sediment	YGALMELVKNKGVWHESTVSPEYSHLTDDGKDAIIHVVEEMFRGMQTIHNAEVKEEAKKQTMDALR*
JGI25909J50240_10236475	3300003393	Freshwater Lake	YAFHDFSILEALQMAKKFDLKRSMNKDLVYGGLLELSRNKMVWHESTVSPEYSHLTEDGKVAIIHVVENMFRGLQTVHETEIKEEAKRQTIEAFKL*
Ga0005853_10209282	3300003754	Freshwater And Sediment	MAKKFDLKRSMNKDLVYGGLLELSRNKMVWHESTVSPEYSHLTEDGKVAIIHVVENMFRGLQTIHETEIKEEAKRQTIEAFKL*
Ga0066177_104844431	3300004096	Freshwater Lake	GLLELSRNKMVWHESTVSPEYSHLTEDGKVAIIHVVENMFRGLQTIHETEIKEEAKRQTIEAFKL*
Ga0065166_100146671	3300004112	Freshwater Lake	ARKFDLKRSMNKDLVYGGLLELSRNKMVWHESTVSPEYSHLTEDGKVAIIHIVENMFRGLQIIHEAEVKEEAKRQTLEALR*
Ga0065166_104788522	3300004112	Freshwater Lake	MARKFDIKRSMHKDMVYGSLMELVKNRQVWHESTVSPEYSHLTDDGKDAIIHVVEEMFRGMQTIHNQEIKEEAKRQTLEALKQ*
Ga0065166_104960471	3300004112	Freshwater Lake	NIKRSMNKDLVYGGLLELSRNKLVWHESTVSAEYSHLTDEGKDAIIHIVENMFRGLQIIHEQEIKEEAKRQTLESLK*
Ga0007787_1000128511	3300004240	Freshwater Lake	MARKFDIRRSMHKDMLYGSLLELSQNARVWHESSVSPEYSHLTEDGKAAIIHVVEELFRGLQTIHKQEVNEEAKRQTMEALK*
Ga0007787_100182211	3300004240	Freshwater Lake	VARKFDIRRSMHKDMLYGSLLELSKNQRVWHESSVSPEYSHLTEDGQKAIIHVVEELFRGLQTIHKQEVNEEAKRQTMEALK*
Ga0049080_100703252	3300005582	Freshwater Lentic	MAKKFDLKRSMNKDLVYGGLLELSRNKMVWHESTVSPEYSHLTEDGKVAIIHVVENMFRGLQTVHETEIKEEAKRQTIEAFKL*
Ga0078894_1000021238	3300005662	Freshwater Lake	MNKDLVYGGLLELSRNKMVWHESTVSPEYSHLTEDGKVAIIHIVENMFRGLQIIHEAEVKEEAKRQTLEALR*
Ga0078894_100382616	3300005662	Freshwater Lake	MARKFDIKRSMHKDMVYGSLMELVKNKQVWHESSVAPEYSHLTDDGKDAIIHVVEEMFRGMQTIQSQEIKEEAKRQTLEALKQ*
Ga0078894_105236902	3300005662	Freshwater Lake	MAKKFDIKRSMNKDLIYGGLLELSRNRLVWHESTVSAEYSHLTDEGKEAIIHVVENMFRGLQIIHEQELKEEAKRQTMEALKQ*
Ga0078894_115897742	3300005662	Freshwater Lake	MAKKFNIKRSMNKDLVYGGLLELSRNKLVWHESTVSAEYSHLTDEGKDAIIHIVENMFRGLQIIHEQEIKEEAKRQTLE
Ga0079957_11210992	3300005805	Lake	MAKKYELKRSMNKDIIYGSLMELSKNNRVWYESSIGAEYSHLTDDGKKAIIHVVEEMFRGLQRIHQEEIKEEAKKQMIEELKK*
Ga0070743_1000001043	3300005941	Estuarine	MAKKFNLRRSMNKDIVYGALLELSQNPKVWHESSVSAEYSHLTEDGKDAIIHVIEEMFRGLQTIHRQEVKEEAKLQTLESLK*
Ga0114340_100010064	3300008107	Freshwater, Plankton	MAKKFNLRRSMNKDIVYGALLELSRNKSVWHESSVSPEYSHLTEEGKDAIIHVIEDMFRGLQTIHNQEVKEEAKQQTLEALR*
Ga0114340_100063851	3300008107	Freshwater, Plankton	MARKFNIRRSMHKDMTYGALMELVKNPKVWHESSVAPEYSHLTEDGKDAIVHVVEEMFRGMQTIHNAEVKEEAKRQTLEALK*
Ga0114340_100154623	3300008107	Freshwater, Plankton	MHKDMLYGALLELAKNQRVWHESTVSPEYSHLTEDGKDAIIHVVEELFRGLQTIHKQEVKEEAKRQTLESLKQ*
Ga0114340_10228386	3300008107	Freshwater, Plankton	MAKKFDIKRSMNKDLIYGGLLELSRNKLVWHESTVSPEYSHLTEDGKVAIIHIVENMFRGLQIIHEQEVKEEAKQQTLEALR*
Ga0114341_1000007061	3300008108	Freshwater, Plankton	MARKYNIRRSMHKDMLYGALLELVQNQRVWHESSVSPEYSHLTEEGKDAIIHIVEEMFRGLQTIHKQEIKEEAKKQTMEALK*
Ga0114341_1000191355	3300008108	Freshwater, Plankton	MARKYDIRRSMHKDMLYGALLELSQNGKVWHESSVSPEYSHLTDQGKDAIIHVVEEMFRGLQTIHKQEVKEEAKRQTLESLK*
Ga0114341_100286532	3300008108	Freshwater, Plankton	MGKKFNIRRSMNKDIVYGALLELSQNQRVWHESSVSPEYSKLTDEGREAIVHVIEEMFRGLQTIHKMEIADEAKRQTLEALQ*
Ga0114341_103704612	3300008108	Freshwater, Plankton	MNKDIVYGALLELSQNQRVWHESSVSPEYSKLTEEGREAIIHVIEEMFRGLQTIHQLEIKEEAKRQTLEALR*
Ga0114343_1000179103	3300008110	Freshwater, Plankton	MARKFNIRRSMHKDMTYGALMELVKNPKVWHESSVAPEYSHLTEDGKDAIVHVVEEMFRGMQTIHNAEVKEEAKRQTLEAMK*
Ga0114346_10181772	3300008113	Freshwater, Plankton	VARKFDIRRSMHKDMLYGALLELSQNQRVWHESSVSPEYSHLTEDGKAAIIHVVEELFRGLQTIHKQEVKEEAKRQTMESLKS*
Ga0114841_10928571	3300008259	Freshwater, Plankton	MNKDIVYGALLELSQNQRVWHESSVSPEYSKLTDEGREAIVHVIEEMFRGLQTIHKMEIADEAKRQ
Ga0114336_13674272	3300008261	Freshwater, Plankton	FHDFSILEALQMAKKFDLKRSMNKDLVYGGLLELSRNKMVWHESTVSPEYSHLTEDGKVAIIHVVENMFRGLQTVHETEIKEEAKRQTIEAFKL*
Ga0114982_10023243	3300009419	Deep Subsurface	MARKFDIKRSMNKDLVYGGLLELSKNKLVWHESTVSPEYSHLTEDGKTAIIHIVENMFRGLQIIHQQEIKEEAKRQTLEALK*
Ga0114982_10037256	3300009419	Deep Subsurface	MAKNFNIRRSMNKDLVYGGLLELSKNKLVWHESTVSPEYSHLTEDGKDAIIHIVENMFRGLQTIHNQEVKEEAKKQTLDTLKGK*
Ga0114982_10042079	3300009419	Deep Subsurface	MAKNFDIKRSMNKDLVYGGLLELSRNKLVWHESSVAPEYSHLTEDGQKAIIHIVENMFRGLQIIHNQEVKEEAKRQTLEALK*
Ga0114982_10230572	3300009419	Deep Subsurface	MAKNFDIKRSMNKDLVYGGLLELAKNPRVWHESVVSPEYSHLTEDGKKAIIHVIENMFRGLQIIHAQEIKDEAKRQTMDALR*
Ga0114982_10420912	3300009419	Deep Subsurface	MARKFEIKRSMHKDMIYGSLMELVKNQRVWHESSVSPEYSHLTEDGKAAIVHVVEDMFRGMQTIHNQEVKEEAKRQTLESLKA*
Ga0114982_11654792	3300009419	Deep Subsurface	MAKNFDIKRSMNKDLVYGGLLELAKNKLVWHESTVSAEYSHLTDDGKKAIIHIVENMFRGLQVIHQQEIKEEAMRQTMDALR*
Ga0129333_1000001489	3300010354	Freshwater To Marine Saline Gradient	MARKFNIRRSMNKDIIYGALLELSQNQRVWHESSVGAEYSHLTEEGKEAIIHVVEEMFRGLQTIHKMEVADEAKRQTLEALK*
Ga0129333_1000002074	3300010354	Freshwater To Marine Saline Gradient	MGKKFNIRRSMNKDIIYGALLELSQNQRVWHESSVSPEYSKLTDEGREAIIHVVEEMFRGLQTIHKMEIADEAKRQTLEALQ*
Ga0129333_100427884	3300010354	Freshwater To Marine Saline Gradient	MAKKYDLRRSMNKDIVYGSLMELSRNNRVWYESSVGPEYSSLTEDGKKAIIHVVEEMFRGLQRIHAEEVKEEAKKQMLDELQK*
Ga0129333_100882324	3300010354	Freshwater To Marine Saline Gradient	MARKYDIRRSMHKDMLYGSLLELAKNKQVWYESSTGPEYSHLTDEGKEAIIHVIEEMFRGLQTIHKQEIREEAKNQTLEALKN*
Ga0129333_103802613	3300010354	Freshwater To Marine Saline Gradient	MARKFEIKRSMNKDIIYGALMELSQNPRVWRESTVSPEYSSLTEDGKEAIIHVIEEMFRGLQTIHKLEIREEAKKQTLDALKG*
Ga0129333_109956573	3300010354	Freshwater To Marine Saline Gradient	MNKDIVYGALLELSQNQRVWHESSVSPEYSKLTDEGREAIVHVIEEMFRGLQTIHQMEIKEEAKRQTLEALQ*
Ga0129333_117366891	3300010354	Freshwater To Marine Saline Gradient	VVTLCVFRGFSISEALAMAKKYELNRSMNKDIVYGSLMELSRNSRVWYESSIGVEYSHLTEDGKDAIIHVVEELFRGMQTIHNQEIKEEAKKQTLEALKP*
Ga0129336_107301352	3300010370	Freshwater To Marine Saline Gradient	LKMGKKFNIRRSMNKDIIYGALLELSQNQIVWHESSVSPEYSKLTDEGREAIIHVVEEMFRGLQTIHKMEIADEAKRQTLEALQ*
Ga0114986_10951162	3300010374	Deep Subsurface	MAKKFNLRRSMNKDIIYGALLELSQNRTVWHESSVSPEYSHLTEDGKDAIIHVIEDMFRGLQTIHNQEVKEEAKRQTLEALKA*
Ga0136551_10016684	3300010388	Pond Fresh Water	MAKNFDIKRSMNKDLVYGGLLELAKNSRVWHESAVSPEYSHLTEDGKKAIIHVVENMFRGLQQIHAQEIKEEAKRQTLESLK*
Ga0136551_10099382	3300010388	Pond Fresh Water	MAKRFDIRRSMNKDMVYGALSELVKNRMVWHESSVAPEYSHLTEDGKKAIIHVVEEMFRGLQIIHQAEVKEEAKRQTLDALK*
Ga0136551_10910441	3300010388	Pond Fresh Water	MARKYDIRRSMHKDMLYGSLMELVKNQRVWHESSVSPEYSHLTEDGKDAIVHVIEEMFRGLQTIHCQEIKEEAKRQTLESLK*
Ga0157141_10001672	3300012346	Freshwater	MAKNFDIKRSMNKDLVYGGLLELAKNRLVWHESSVSPEYSHLTEDGKKAIIHVVENMFRGLQVIHETEIKEEAKRQTLESLR*
Ga0157141_10069252	3300012346	Freshwater	MAKKFDIKRSMNKDLVYGGLLELSKNRLVWHESTVAPEYSHLTEDGKKAIIHVVENMFRGLQTIHEQEVKEEAKRQTLDALR*
Ga0157138_10086782	3300012352	Freshwater	MAKNFDIKRSMNKDLVYGGLLELAKNKLVWHESSVSPEYSHLTEDGKKAIIHVVENMFRGLQIIHNQEVTEEAKRQTFERLK*
Ga0157203_100122111	3300012663	Freshwater	MARKFNIRRSMHKDMTYGALMELVKNKGVWHESTVSPEYSHLTDDGKDAIIHVVEEMFRGMQTIHNAEVKEEAKRQTMDALR*
Ga0157203_10188392	3300012663	Freshwater	MNKDMVYGALSELVRNKTVWHESTVAPEYSHLTEDGKDAIIHVVEEMFRGLQIIHEQEVKEEAKRQTLEALK*
Ga0157497_10170433	3300012664	Freshwater	MAKKFEIRRSMHKDMVYGSLMELVKNGRVWHESRVAPEYSHLTEDGRNAIIHVVEEMFRGMQTIHNQEVKEEAKRQTLESLK*
Ga0157497_10325232	3300012664	Freshwater	MAKKFNIRRSMHKDMVYGSLMELVKNRQVWHESSVAPEYSXXXXSHLTEDGKDAIVHVVEEMFRGMQTIHNQEIKEEAKKQTLESLK*
Ga0157210_10016809	3300012665	Freshwater	MAKKFDIKRSMNKDLVYGGLLELSRNKLVWHESTVAPEYSHLTEDGQKAIIHVVENMFRGLQIIHTQEVKEEAKRQTLESLKL*
Ga0157210_10038523	3300012665	Freshwater	MARKFDIKRSMNKDLVYGGLLELSRNRLVWHESTVAPEYSHLTEDGKDAIIHIVENMFRGLQIIHSQEVKEEAKRQTFEALK*
Ga0157210_10054102	3300012665	Freshwater	MARKFDIKRSMNKDLVYGGLLELSRNRLVWHESTVAPEYSHLTEDGQKAIIHVVENMFRGLQIIHNQEVKEEAKRQTLESLKL*
Ga0157208_1000000258	3300012667	Freshwater	MAKNFDIKRSMNKDLVYGGLLELAKNPRVWYESAVSPDYSHLTEDGKKAIIHVVENMFRGLQQIHAQEIKEEAKRQTLESLK*
Ga0157208_1000017211	3300012667	Freshwater	MAKNFDIKRSMNKDLVYGGLLELAKNPRVWHESTVSPEYSHLTDDGKKAIIHVIENMFRGLQIIHEQEVKDEAKRQTLDALR*
Ga0157211_100012223	3300012933	Freshwater	MARKFNIRRSMNKDMVYGALSELVKNRTVWHQSTVSPEYSHLTEDGKDAIVHVIEDMFRGLQIIHEQEVKEEAKRQTMESLKG*
Ga0119952_10294182	3300014050	Freshwater	MARKFDLRRSMHKDMLYGALLELSQNKRVWHESSVSPEYSHLTEEGREAIVHVVEEMFRGLQTIHTIEIKEEAKRQTLDAMK*
Ga0134316_10394672	3300014960	Surface Water	MARKFDIKRSMHKDMVYGALMELVKNRTVWHESSVSVEYSHLTDEGKDAIIHVVEEMFRGLQTIHNQEVKEEAKRQTLETLR
Ga0181343_10936591	3300017766	Freshwater Lake	MAKNYDIRRSMHKDMLYGALLELSQNQRVWYESTVGPQYSHLTDEGKDAIMHVVEEMFRGLQTVHQQEITEEAKRQTMEALKS
Ga0211733_106626623	3300020160	Freshwater	MAKKFDLKRSMNKDLVYGGLLELSRNKMVWHESTVSPEYSHLTEDGKVAIIHVVENMFRGLQTIHETEIKEEAKRQTIEAFKL
Ga0208224_10169832	3300020528	Freshwater	MARKFNIRRSMNKDIVYGALLELSQNQRVWHESSVSPEYSKLTEEGREAIIHVIEEMFRGLQTIHQLEIKEEAKRQTLEALR
Ga0194133_100211016	3300021091	Freshwater Lake	MARKFDISRSMNKDIVYGSLLELSQNQRVWHESTVSPEYSKLTDEGREAIIHVVEEMFRGLQTIHKMEIADEAKRQTLDSLKS
Ga0194123_105315821	3300021093	Freshwater Lake	VLIRYVFRGLSVSEDFKMARKFDISRSMNKDIVYGSLLELSQNQRVWHESTVSPEYSKLTDEGREAIIHVVEEMFRGLQTIHKMEIADEAKRQTLDSLKS
Ga0213922_10454231	3300021956	Freshwater	GALSELVKNKSVWHESTVSPEYSHLTDDGKDAIIHVVEEMFRGLQTIHQAEIKEEAKRQTLDSLR
Ga0213922_10646513	3300021956	Freshwater	MARKFEIRRSMHKDMIYGSLMELVKNQRVWHESSVSPEYSHLTEDGKNAIIHVVEDMFRGMQTIHNQEVKEEAKRQTLESLKV
Ga0213922_11188342	3300021956	Freshwater	DMIYGSLMELVKNQRVWHESTVSPEYSHLTDDGRNAIIHVVEEMFRGMQTIQQQEIKEEAKRQTLESLK
Ga0222713_100470072	3300021962	Estuarine Water	MGKKFNIRRSMNKDIVYGALLELSQNQRVWHESSVSPEYSKLTDEGREAIVHVIEEMFRGLQTIHQMEIKEEAKRQTLEALQ
Ga0222713_100624262	3300021962	Estuarine Water	MLYGALLELSQNQKVWHESSVSPEYSHLTDSGKDAIVHVVEEMFRGLQTIHKQEIKEEAKRQTLEALK
Ga0222712_101473145	3300021963	Estuarine Water	MNKDIIYGALLELSQNQRVWHESSVSAEYSHLTEEGKEAIIHVVEEMFRGLQTIHKQEIHEEAKRQTLESLK
Ga0222712_102108512	3300021963	Estuarine Water	VARKFDIRRSMHKDMLYGSLLELSQNARVWHESTVSPEYSHLTDDGKAAIIHVVEELFRGLQTIHKQEVKEEAKRQTMDALR
Ga0222712_104086073	3300021963	Estuarine Water	MARKFNIRRSMNKDIIYGALLELSQNQRVWHESSVGAEYSHLTEEGKEAIIHVVEEMFRGLQTIHKMEVADEAKRQTLEALK
Ga0181353_11006072	3300022179	Freshwater Lake	LYGALLELSQNQRVWYESTVGPQFSHLTDEGKDAIMHVVEEMFRGLQTVHQQEIAEEAKRQTMEALKS
Ga0236341_100003024	3300022591	Freshwater	MHKDMVYGSLMELVKNRQVWHESTVSVEYSHLTEDGKNAIIHVVEELFRGMQNIQQQEIREEAKQQTMNALK
Ga0228702_11435143	3300022748	Freshwater	KRSMHKDMVYGSLMELVRNKQVWHESTVSPEYSHLTDDGRDAIIHVVEEMFRGLQTIHNQEVKEEAKKQTLEALKQ
Ga0256681_1006822217	3300023311	Freshwater	MARKFDIKRSMHKDMVYGSLMELVKNRQVWHESTVSVEYSHLTEDGKNAIIHVVEELFRGMQNIQQQEIREEAKQQTMNALK
Ga0255147_1000008218	3300024289	Freshwater	MLYGALLELSQNGRVWHESTVSPEYSHLTEDGKNAIIHVVEEMFRGLQTIHKQEVKEEAKRQTLEGLKS
Ga0255147_10001619	3300024289	Freshwater	MAKRFDIRRSMHKDMLYGAMLELAKNQRVWHESSVSPEYSHLTDDGKAAIIHVVEEMFRGLQTIHKEEVKEEAKRQTMEALK
Ga0255147_10222612	3300024289	Freshwater	MARKFDIRRSMHKDMLYGALLELSQNARVWHESTVSPEYSHLTEDGQKAIIHVVEEMFRGLQTIHKQEVKEEAKRQTLESLK
Ga0255147_10487881	3300024289	Freshwater	IRYVSRGLSVLEALKMARKFEIKRAMNKDIVYGALMELSQNPRVWRESTVSPEYSSLTDDGKEAIIHVIEEMFRGLQTIHKLEIREEAKKQTLDALKG
Ga0255178_10355321	3300024298	Freshwater	YILEGLTMARKFDIRRSMHKDMLYGALLELSQNARVWHESTVSPEYSHLTEDGQKAIIHVVEEMFRGLQTIHKQEVKEEAKRQTLESLK
Ga0255178_10626962	3300024298	Freshwater	MARKFEIKRAMNKDIVYGALMELSQNPRVWRESTVSPEYSSLTDDGKEAIIHVIEEMFRGLQTIHKLEIRE
Ga0244775_1000022555	3300024346	Estuarine	MNKDIVYGALLELSQNPKVWHESSVSAEYSHLTEDGKDAIIHVIEEMFRGLQTIHRQEVKEEAKLQTLESLK
Ga0255141_10002584	3300024351	Freshwater	VARKFDIRRSMHKDMLYGALLELSQNGRVWHESTVSPEYSHLTEDGKNAIIHVVEEMFRGLQTIHKQEVKEEAKRQTLEGLKS
Ga0255165_10204133	3300024357	Freshwater	KMAAIRYVSRGLSVLEALKMARKFEIKRAMNKDIVYGALMELSQNPRVWRESTVSPEYSSLTDDGKEAIIHVIEEMFRGLQTIHKLEIREEAKKQTLDALKG
Ga0255164_10585382	3300024495	Freshwater	MNKDIVYGALMELSQNPRVWRESTVSPEYSSLTDDGKEAIIHVIEEMFRGLQTIHKLEIREEAKKQTLDALKG
Ga0255151_10698902	3300024496	Freshwater	MARKFEIKRAMNKDIVYGALMELSQNPRVWRESTVSPEYSSLTDDGKEAIIHVIEEMFRGLQTIHKLEIREEAKKQTLDALK
Ga0255179_10013737	3300024504	Freshwater	LYGAMLELAKNQRVWHESSVSPEYSHLTDDGKAAIIHVVEEMFRGLQTIHKEEVKEEAKRQTMEALK
Ga0255183_10278023	3300024515	Freshwater	KMARKFEIKRAMNKDIVYGALMELSQNPRVWRESTVSPEYSSLTDDGKEAIIHVIEEMFRGLQTIHKLEIREEAKKQTLDALKG
Ga0208022_10240344	3300027418	Estuarine	MAKKFNLRRSMNKDIVYGALLELSQNPKVWHESSVSAEYSHLTEDGKDAIIHVIEEMFRGLQTIHRQEVKEEAKLQTLESLK
Ga0209033_10775112	3300027697	Freshwater Lake	MARKFDIRRSMHKDMLYGSLLELSQNARVWHESSVSPEYSHLTEDGKAAIIHVVEELFRGLQTIHKQEVNEEAKRQTMEALK
Ga0209599_1000000249	3300027710	Deep Subsurface	MARKFDIKRSMNKDLVYGGLLELSKNKLVWHESTVSPEYSHLTEDGKTAIIHIVENMFRGLQIIHQQEIKEEAKRQTLEALK
Ga0209599_100037329	3300027710	Deep Subsurface	MAKNFDIKRSMNKDLVYGGLLELSRNKLVWHESSVAPEYSHLTEDGQKAIIHIVENMFRGLQIIHNQEVKEEAKRQTLEALK
Ga0209599_100138011	3300027710	Deep Subsurface	MNKDLVYGGLLELSKNKLVWHESTVSPEYSHLTEDGKDAIIHIVENMFRGLQTIHNQEVKEEAKKQTLDTLKGK
Ga0209599_100175292	3300027710	Deep Subsurface	MAKNFDIKRSMNKDLVYGGLLELAKNPRVWHESVVSPEYSHLTEDGKKAIIHVIENMFRGLQIIHAQEIKDEAKRQTMDALR
Ga0209599_100359032	3300027710	Deep Subsurface	MARKFEIKRSMHKDMIYGSLMELVKNQRVWHESSVSPEYSHLTEDGKAAIVHVVEDMFRGMQTIHNQEVKEEAKRQTLESLKA
Ga0209599_101249142	3300027710	Deep Subsurface	MAKNFDIKRSMNKDLVYGGLLELAKNKLVWHESTVSAEYSHLTDDGKKAIIHIVENMFRGLQVIHQQEIKEEAMRQTMDALR
Ga0209442_100115017	3300027732	Freshwater Lake	MAKKFDLKRSMNKDLVYGGLLELSRNKMVWHESTVSPEYSHLTEDGKVAIIHVVENMFRGLQTVHETEIKEEAKRQTIEAFKL
Ga0209107_101331331	3300027797	Freshwater And Sediment	TLYVFHDFSILEALQMAKKFDLKRSMNKDLVYGGLLELSRNKMVWHESTVSPEYSHLTEDGKVAIIHVVENMFRGLQTVHETEIKEEAKRQTIEAFKL
Ga0209358_1001248111	3300027804	Freshwater Lake	MARKFDIRRSMHKDMLYGSLLELSQNARVWHESSVSPEYSHLTEDGKAAIIHVVEELFRGLQTIHKQEVNEEAKRQTM
Ga0209230_1000284814	3300027836	Freshwater And Sediment	MAKKFDIKRSMNKDLIYGGLLELSRNKLVWHESTVSPEYSHLTEDGKVAIIHIVENMFRGLQIIHEQEVKEEAKRQTLETLKS
Ga0209230_100275392	3300027836	Freshwater And Sediment	MARKFDIRRSMHKDMTYGALMELVKNKGVWHESTVSPEYSHLTDDGKDAIIHVVEEMFRGMQTIHNAEVKEEAKKQTMDALR
Ga0209230_101188252	3300027836	Freshwater And Sediment	MARKFNIRRSMNKDMVYGALSELVKNKQVWHQSTVAPEYSHLTEDGKDAIVHVVEEMFRGLQIIHEAEIKEEAKRQTLEALK
Ga0247723_10316763	3300028025	Deep Subsurface Sediment	MAKNFNIRRSMNKDLVYGGLLELSKNKLVWHESTVSPEYSHLTEDGKDAIIHIVENMFRGLQTIHNQEVKEEAKKQTLDTLKGK
Ga0255172_10698312	3300028103	Freshwater	LEGLTMARKFDIRRSMHKDMLYGALLELSQNARVWHESTVSPEYSHLTEDGQKAIIHVVEEMFRGLQTIHKQEVKEEAKRQTLESLK
Ga0315907_100998924	3300031758	Freshwater	MARKYNIRRSMHKDMLYGALLELVQNQRVWHESSVSPEYSHLTEEGKDAIIHIVEEMFRGLQTIHKQEIKEEAKKQTMEALK
Ga0315899_1000132642	3300031784	Freshwater	MLYGALLELAKNQRVWHESTVSPEYSHLTEDGKDAIIHVVEELFRGLQTIHKQEVKEEAKRQTLESLKQ
Ga0315899_1000233216	3300031784	Freshwater	MNKDIVYGALLELSRNKSVWHESSVSPEYSHLTEEGKDAIIHVIEDMFRGLQTIHNQEVKEEAKQQTLEALR
Ga0315899_102152106	3300031784	Freshwater	MARKFNIRRSMHKDMTYGALMELVKNPKVWHESSVAPEYSHLTEDGKDAIVHVVEEMFRGMQTIHNAEVKEEAKRQTLEALK
Ga0315899_111193911	3300031784	Freshwater	VLIRYVFRGSYVSEGLKMGKKFNIRRSMNKDIVYGALLELSQNQRVWHESSVSPEYSKLTDEGREAIVHVIEEMFRGLQTIHKMEIADEAKRQTLEALQ
Ga0315899_115854612	3300031784	Freshwater	YILEGLNVARKFDIRRSMHKDMLYGALLELSQNQRVWHESSVSPEYSHLTEDGKAAIIHVVEELFRGLQTIHKQEVKEEAKRQTMESLKS
Ga0315909_100405543	3300031857	Freshwater	MNKDIVYGALLELSQNQRVWHESSVSPEYSKLTDEGREAIVHVIEEMFRGLQTIHKMEIADEAKRQTLEALQ
Ga0315909_103656214	3300031857	Freshwater	MARKFNIRRSMHKDMTYGALMELVKNPTVWHESSVAPEYSHLTEDGKDAIVHVVEEMFRGMQTIHNAEVKEEAKRQTLEAMK
Ga0335028_0011535_799_1017	3300034071	Freshwater	MNKDIVYGALLELSQNQRVWHESSVSPEYSKLTEEGREAIIHVIEEMFRGLQTIHQLEIKEEAKRQTLEALR
Ga0335030_0764139_2_223	3300034103	Freshwater	MHKDMVYGSLMELVKNRQVWHESTVSPEYSHLTDDGKDAIIHVVEELFRGMQTIHNQEVKEEAKKQTLEALKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076859

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences