Metagenome Family F076993

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076993
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	42 residues
Representative Sequence	LIAAVAATIASLALAWARNGAIADLLDGVLDHVRTLFGIG
Number of Associated Samples	79
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.26 %
% of genes near scaffold ends (potentially truncated)	50.43 %
% of genes from short scaffolds (< 2000 bps)	79.49 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.538 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (32.479 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (25.641 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.53% β-sheet: 0.00% Coil/Unstructured: 51.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF07811	TadE	51.28
PF08751	TrwC	10.26
PF00892	EamA	9.40
PF13400	Tad	6.84
PF00482	T2SSF	3.42
PF03641	Lysine_decarbox	2.56
PF02347	GDC-P	0.85
PF13581	HATPase_c_2	0.85
PF08241	Methyltransf_11	0.85
PF11706	zf-CGNR	0.85
PF09369	MZB	0.85
PF13604	AAA_30	0.85
PF13424	TPR_12	0.85
PF03551	PadR	0.85
PF13358	DDE_3	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	2.56
COG0403	Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain	Amino acid transport and metabolism [E]	0.85
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.85
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
All Organisms	root	All Organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
cellular organisms	root	All Organisms → cellular organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	6.84 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	6.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	6.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004016\|Ga0058689_10058335	Not Available	733	Open in IMG/M
3300005457\|Ga0070662_100548175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	969	Open in IMG/M
3300005562\|Ga0058697_10062260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1460	Open in IMG/M
3300005562\|Ga0058697_10195201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300005563\|Ga0068855_101927608	Not Available	598	Open in IMG/M
3300006049\|Ga0075417_10614899	Not Available	553	Open in IMG/M
3300006844\|Ga0075428_101318773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	759	Open in IMG/M
3300009094\|Ga0111539_10478258	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300009147\|Ga0114129_10418946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1762	Open in IMG/M
3300009147\|Ga0114129_12215609	Not Available	661	Open in IMG/M
3300009147\|Ga0114129_12387068	Not Available	634	Open in IMG/M
3300009156\|Ga0111538_10378595	Not Available	1792	Open in IMG/M
3300009162\|Ga0075423_11736754	Not Available	672	Open in IMG/M
3300009789\|Ga0126307_10010366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6762	Open in IMG/M
3300009789\|Ga0126307_10026543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4431	Open in IMG/M
3300009789\|Ga0126307_10057776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3040	Open in IMG/M
3300009789\|Ga0126307_10138005	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1949	Open in IMG/M
3300009789\|Ga0126307_11247613	Not Available	602	Open in IMG/M
3300009804\|Ga0105063_1079487	Not Available	521	Open in IMG/M
3300009807\|Ga0105061_1009959	Not Available	1177	Open in IMG/M
3300009811\|Ga0105084_1064286	Not Available	661	Open in IMG/M
3300009817\|Ga0105062_1086310	Not Available	609	Open in IMG/M
3300009821\|Ga0105064_1060957	Not Available	737	Open in IMG/M
3300009840\|Ga0126313_10008792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6259	Open in IMG/M
3300009840\|Ga0126313_10009832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5984	Open in IMG/M
3300009840\|Ga0126313_10023097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4163	Open in IMG/M
3300009840\|Ga0126313_10045038	All Organisms → cellular organisms → Bacteria	3090	Open in IMG/M
3300010029\|Ga0105074_1009273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1531	Open in IMG/M
3300010037\|Ga0126304_10263670	Not Available	1136	Open in IMG/M
3300010037\|Ga0126304_10367392	Not Available	958	Open in IMG/M
3300010038\|Ga0126315_10122260	Not Available	1518	Open in IMG/M
3300010041\|Ga0126312_10192397	Not Available	1424	Open in IMG/M
3300010041\|Ga0126312_10993781	Not Available	614	Open in IMG/M
3300010042\|Ga0126314_10158144	Not Available	1582	Open in IMG/M
3300010042\|Ga0126314_10508443	Not Available	875	Open in IMG/M
3300010166\|Ga0126306_10034726	All Organisms → cellular organisms → Bacteria	3428	Open in IMG/M
3300010362\|Ga0126377_10033917	Not Available	4341	Open in IMG/M
3300012350\|Ga0137372_10546869	Not Available	856	Open in IMG/M
3300012354\|Ga0137366_11133136	Not Available	536	Open in IMG/M
3300012355\|Ga0137369_10113347	Not Available	2205	Open in IMG/M
3300012355\|Ga0137369_10391852	Not Available	1004	Open in IMG/M
3300012358\|Ga0137368_10343023	Not Available	996	Open in IMG/M
3300012358\|Ga0137368_10815832	Not Available	576	Open in IMG/M
3300012359\|Ga0137385_10106789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2480	Open in IMG/M
3300012360\|Ga0137375_10529354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300012360\|Ga0137375_10755149	Not Available	787	Open in IMG/M
3300012532\|Ga0137373_11148810	Not Available	552	Open in IMG/M
3300012938\|Ga0162651_100090107	Not Available	518	Open in IMG/M
3300014487\|Ga0182000_10083409	Not Available	1036	Open in IMG/M
3300014487\|Ga0182000_10679798	Not Available	506	Open in IMG/M
3300017997\|Ga0184610_1077745	Not Available	1024	Open in IMG/M
3300018028\|Ga0184608_10201181	Not Available	872	Open in IMG/M
3300018052\|Ga0184638_1017379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2512	Open in IMG/M
3300018061\|Ga0184619_10319073	Not Available	710	Open in IMG/M
3300018063\|Ga0184637_10000651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25348	Open in IMG/M
3300018078\|Ga0184612_10361346	Not Available	735	Open in IMG/M
3300018081\|Ga0184625_10061522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1895	Open in IMG/M
3300018082\|Ga0184639_10225307	Not Available	993	Open in IMG/M
3300018465\|Ga0190269_10047783	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300018465\|Ga0190269_11050404	Not Available	622	Open in IMG/M
3300018466\|Ga0190268_10116836	Not Available	1282	Open in IMG/M
3300018476\|Ga0190274_10019370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4434	Open in IMG/M
3300018476\|Ga0190274_12407638	Not Available	624	Open in IMG/M
3300022694\|Ga0222623_10282662	Not Available	638	Open in IMG/M
3300022756\|Ga0222622_10020311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3369	Open in IMG/M
3300022756\|Ga0222622_10617491	Not Available	783	Open in IMG/M
3300025928\|Ga0207700_10319071	All Organisms → cellular organisms → Bacteria → Acidobacteria	1346	Open in IMG/M
3300026702\|Ga0208708_101645	Not Available	598	Open in IMG/M
3300027332\|Ga0209861_1006671	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300027718\|Ga0209795_10206706	Not Available	550	Open in IMG/M
3300027718\|Ga0209795_10226313	Not Available	524	Open in IMG/M
3300027954\|Ga0209859_1006840	Not Available	2365	Open in IMG/M
3300027961\|Ga0209853_1153438	Not Available	556	Open in IMG/M
3300028704\|Ga0307321_1088377	Not Available	620	Open in IMG/M
3300028705\|Ga0307276_10034101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1070	Open in IMG/M
3300028708\|Ga0307295_10100583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	779	Open in IMG/M
3300028711\|Ga0307293_10121956	Not Available	828	Open in IMG/M
3300028717\|Ga0307298_10141650	Not Available	696	Open in IMG/M
3300028720\|Ga0307317_10000894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8968	Open in IMG/M
3300028771\|Ga0307320_10084596	Not Available	1195	Open in IMG/M
3300028796\|Ga0307287_10295484	Not Available	612	Open in IMG/M
3300028876\|Ga0307286_10340188	Not Available	558	Open in IMG/M
3300028881\|Ga0307277_10208620	Not Available	857	Open in IMG/M
3300028889\|Ga0247827_10839740	Not Available	612	Open in IMG/M
3300030336\|Ga0247826_11524879	Not Available	542	Open in IMG/M
3300030510\|Ga0268243_1158531	Not Available	550	Open in IMG/M
3300031548\|Ga0307408_100028668	All Organisms → cellular organisms → Bacteria	3849	Open in IMG/M
3300031548\|Ga0307408_101446728	Not Available	648	Open in IMG/M
3300031731\|Ga0307405_10016389	All Organisms → cellular organisms → Bacteria	4041	Open in IMG/M
3300031731\|Ga0307405_10020988	All Organisms → cellular organisms → Bacteria	3663	Open in IMG/M
3300031731\|Ga0307405_10133098	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300031731\|Ga0307405_10232742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1359	Open in IMG/M
3300031731\|Ga0307405_10740946	Not Available	818	Open in IMG/M
3300031731\|Ga0307405_11633726	Not Available	569	Open in IMG/M
3300031824\|Ga0307413_10466099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1006	Open in IMG/M
3300031824\|Ga0307413_10534260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	948	Open in IMG/M
3300031852\|Ga0307410_10037489	All Organisms → cellular organisms → Bacteria	3167	Open in IMG/M
3300031852\|Ga0307410_10081413	All Organisms → cellular organisms → Bacteria	2274	Open in IMG/M
3300031852\|Ga0307410_10302701	Not Available	1262	Open in IMG/M
3300031901\|Ga0307406_10002457	All Organisms → cellular organisms → Bacteria	10095	Open in IMG/M
3300031903\|Ga0307407_10074705	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300031903\|Ga0307407_10433226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	950	Open in IMG/M
3300031903\|Ga0307407_10887253	Not Available	683	Open in IMG/M
3300031903\|Ga0307407_11215935	Not Available	589	Open in IMG/M
3300031938\|Ga0308175_100862604	Not Available	994	Open in IMG/M
3300031995\|Ga0307409_100164838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1943	Open in IMG/M
3300031996\|Ga0308176_10907729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	926	Open in IMG/M
3300032002\|Ga0307416_102880493	Not Available	575	Open in IMG/M
3300032004\|Ga0307414_12273481	Not Available	506	Open in IMG/M
3300032005\|Ga0307411_10460339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1066	Open in IMG/M
3300032005\|Ga0307411_11177456	Not Available	694	Open in IMG/M
3300032005\|Ga0307411_11200145	Not Available	688	Open in IMG/M
3300032126\|Ga0307415_100137592	Not Available	1860	Open in IMG/M
3300032126\|Ga0307415_100173846	Not Available	1682	Open in IMG/M
3300032159\|Ga0268251_10042926	Not Available	1454	Open in IMG/M
3300032159\|Ga0268251_10056327	Not Available	1304	Open in IMG/M
3300032159\|Ga0268251_10139514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	904	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.39%
Host-Associated	Host-Associated	37.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.99%
Plants	Host-Associated → Plants	37.61%
Aquatic	Environmental → Aquatic	9.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.91%
Sediment	Environmental → Aquatic → Sediment	9.40%
Phylloplane	Host-Associated → Plants → Phylloplane	5.98%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	29.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.40%
Sand	Environmental → Terrestrial → Soil → Sand	7.69%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.98%
Loam	Environmental → Terrestrial → Soil → Loam	1.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	29.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.40%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	22.22%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	14.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.55%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	7.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.84%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026702	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN593 (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058689_100583352	3300004016	Agave	TGSQTTEYALIMVVAATIASLALAWARNGAIADLLNGVLDHVRSLFGMG*
Ga0070662_1005481751	3300005457	Corn Rhizosphere	ETGSQTTEYALIMVVAATIASLALAWARNGAIADLLTGVLDHVRSLFGIG*
Ga0058697_100622601	3300005562	Agave	SQTTEYALIMVVAATIASLALAWARNGAVADLLNGVLDHVRSLFGMG*
Ga0058697_101952012	3300005562	Agave	MSSECGSQTTEYALIMVVAATIAALALAWARNGAIAGLLDGVLDHVRALFGIG*
Ga0068855_1019276081	3300005563	Corn Rhizosphere	MVVAATIASLALAWARNGAVADLLTGVLDHVRSLFGIG*
Ga0075417_106148992	3300006049	Populus Rhizosphere	VAATIASLALAWARNGAIAGLLDGVLDHVRSLFGMG*
Ga0075428_1013187733	3300006844	Populus Rhizosphere	ATIASLALAWARNGAIADLLTGVLDHVRSLFGIG*
Ga0111539_104782581	3300009094	Populus Rhizosphere	VRLSLTLAVAATIASLALAWARNGAVAGLLDGVLDHVRSLFGMG*
Ga0114129_104189462	3300009147	Populus Rhizosphere	LIAAVAATIASLALAWARNGAVAGLLDGVLDHVRSLFGMG*
Ga0114129_122156092	3300009147	Populus Rhizosphere	LTLAVAATIASLALAWARNGAIADLLDGVLDHVRSLFGMG*
Ga0114129_123870682	3300009147	Populus Rhizosphere	ATIAALALAWARNGAIAGLLDGVLDHVRALFGIA*
Ga0111538_103785954	3300009156	Populus Rhizosphere	LIMVVAATIASLALAWARNGAVAGLLDGVLDHVRSLFGMG*
Ga0075423_117367541	3300009162	Populus Rhizosphere	LIAAVAATIASLALAWARNGAIAGLLDGVLDHVRSLFGMG
Ga0126307_100103662	3300009789	Serpentine Soil	MAAVAATIASLALAWARQGAIAELLDGVLDHVRSLFGIG*
Ga0126307_100265431	3300009789	Serpentine Soil	VAATIASLALAWARQGAIAGLLDGVLDHVRALFGIG*
Ga0126307_100577765	3300009789	Serpentine Soil	LIAAVAATIASLALAWARNGAIADLLTGVLDHVRSLFGMG*
Ga0126307_101380052	3300009789	Serpentine Soil	LIAAVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG*
Ga0126307_112476132	3300009789	Serpentine Soil	MAAVAATIASLALARARNGAIADLLTGVLDHIRSLFGMG*
Ga0105063_10794871	3300009804	Groundwater Sand	MSSEAGSQTTEYALIMVVAATIAALALAWARNGAIAGLRDGVLDHVRALFGIA*
Ga0105061_10099593	3300009807	Groundwater Sand	VAATIAALALAWARNGAIAGLLDGVLDHVRALFGIA*
Ga0105084_10642862	3300009811	Groundwater Sand	VAATIAALALAWARNGAIAGLLDGVLEHVRALFGIA*
Ga0105062_10863102	3300009817	Groundwater Sand	MSSEAGSQTTEYALIMVVAATIAALALAWARNGAIAGLLDGGLEHVRALFGIA*
Ga0105064_10609571	3300009821	Groundwater Sand	RLYYRPSLIAAVAATIAALALAWARNGAIAGLLDGVLDHVRALFGIA*
Ga0126313_100087928	3300009840	Serpentine Soil	LIAAVAATIASLALAWARNGAVADLLNGVLDHVRSLFGMG*
Ga0126313_100098322	3300009840	Serpentine Soil	LIAAVAATIASLALAWARNGAVAELLDGVLDHVRALFGIG*
Ga0126313_100230972	3300009840	Serpentine Soil	LIAAVAATIASLALAWARKGAVAGLLDGVLDQVRSLFGIG*
Ga0126313_100450384	3300009840	Serpentine Soil	LIAAVAATIASLALAWARQGAIAELLDGVLDHVRSLFGIG*
Ga0105074_10092732	3300010029	Groundwater Sand	VAATIAALALAWARNGAIAGLLDGVLDHVRALFGIT*
Ga0126304_102636701	3300010037	Serpentine Soil	MAAVSATIASLALAWARNGAIADLLTGVLDHIRSLFGIG*
Ga0126304_103673921	3300010037	Serpentine Soil	VARYYRPSLIAAVSATIASLALAWARNGAIADLLTGVLDHIRSLFGIG*
Ga0126315_101222603	3300010038	Serpentine Soil	LIAAVAATIASLALAWARQGAIAGLLDGVLDHVRALFGIG*
Ga0126312_101923971	3300010041	Serpentine Soil	VAATIASLALAWARNGAIAELLDGVLDHVRTLFGIS*
Ga0126312_109937811	3300010041	Serpentine Soil	LIAAVAATIASLALAWARNGAVAELLDGVLDHVRTL
Ga0126314_101581442	3300010042	Serpentine Soil	LIAAVSATIASLALAWARNGAIADLLTGVLDHIRSLFGIG*
Ga0126314_105084434	3300010042	Serpentine Soil	YYGLSLIAAVAATIASLALAWARNGAIGDLLDGVLDHVRSLFGMG*
Ga0126306_100347261	3300010166	Serpentine Soil	LIPAVAATIASLALAWARNGAIADLLDGVLDHVRTLFGIS*
Ga0126377_100339174	3300010362	Tropical Forest Soil	MEYALLLIVAATIAVLALSWARQGAIKDLLDAVLDKVQDLFGIG*
Ga0137372_105468692	3300012350	Vadose Zone Soil	SEEGSQTTEYALLIVVSATIASLALAWARNGAVAGLLDAVLKQVRGLFGVA*
Ga0137366_111331361	3300012354	Vadose Zone Soil	SETVEYALMMLVAASIAGLALAWARHGAVVALLDGVIKHVRSLFGIA*
Ga0137369_101133471	3300012355	Vadose Zone Soil	MVLAATIAALALAWARNGAVAGLLDTVLRQVRGMLGIG*
Ga0137369_103918522	3300012355	Vadose Zone Soil	LIAAVAATIAALALAWARNGAIAGLLDGVLDHVRALFG
Ga0137368_103430231	3300012358	Vadose Zone Soil	LIAAVAATIAALALAWARNGAIAGLLDGVLDHVRAL
Ga0137368_108158321	3300012358	Vadose Zone Soil	VSPTYDLSLIVALAATIAALALAWARNGAVAGLLDTVLRQVRGMLGIG*
Ga0137385_101067892	3300012359	Vadose Zone Soil	LIVVLAATIAALALAWARNGAVASLLDTVMRQVRGMLGAG*
Ga0137375_105293541	3300012360	Vadose Zone Soil	LIMVLAATIAALALAWARNGAVAGLLDTVLRQVRGMLGIG*
Ga0137375_107551492	3300012360	Vadose Zone Soil	LIAAVAATIAALALAWARNGAIAGLLDGVLDHVRALFGIA*
Ga0137373_111488102	3300012532	Vadose Zone Soil	VSATIASLALAWARKGAIAGLLDVVMRQVRSLFGIG*
Ga0162651_1000901071	3300012938	Soil	MAAVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG*
Ga0182000_100834091	3300014487	Soil	LILVVAATIASLALAWARQGAIADLLDGVLDHVRSLFGIG*
Ga0182000_106797982	3300014487	Soil	MAAVAATIASLALAWARKGAVADLLNGVLDHVRSLFGMG*
Ga0184610_10777453	3300017997	Groundwater Sediment	MAAVAATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0184608_102011812	3300018028	Groundwater Sediment	LMAAVAATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0184638_10173792	3300018052	Groundwater Sediment	VAATIAALALAWARNGAIAGLLDGVLDHVRALFGIA
Ga0184619_103190731	3300018061	Groundwater Sediment	SQTTEYALIMVVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0184637_100006513	3300018063	Groundwater Sediment	VWQQAWPYGLSLIMVLAATIAALALAWARNGAVAGLLDTVLRQVRGMLGIG
Ga0184612_103613462	3300018078	Groundwater Sediment	MAAVAATIASLALAWARNGAIADLLDGVLDHVRTLFGMG
Ga0184625_100615222	3300018081	Groundwater Sediment	MRGRYYRPSLIAAVAATIASLALAWARNGAIADLLDGVLDHVRSLFGMG
Ga0184639_102253071	3300018082	Groundwater Sediment	LIMVVAATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0190269_100477831	3300018465	Soil	LIVAVAATIASLALAWARNGAIADLLDGVLDHVRSLFGMG
Ga0190269_110504041	3300018465	Soil	RGRYYRPSLIAAVTATIASLALAWARNGAIADLLTGVLDHVRSLFGMG
Ga0190268_101168363	3300018466	Soil	SLIAAVAATIASLALAWARNGAIGDLLDGVLDHVRSLFGMG
Ga0190274_100193708	3300018476	Soil	VAATIASLALAWARNGAIADLLDGVLDHVRTLFGIS
Ga0190274_124076382	3300018476	Soil	YALIMVVAATIASLALAWARNGAVADLLNGVLDHVRSLFGIG
Ga0222623_102826621	3300022694	Groundwater Sediment	ETGSQTTEYALIMVVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0222622_100203111	3300022756	Groundwater Sediment	AATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0222622_106174911	3300022756	Groundwater Sediment	RPFDPETGSQTTEYALIMVVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0207700_103190714	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VVSATIASLALAWARKGAIAGLLDVVMRQVRSLFGIG
Ga0208708_1016452	3300026702	Soil	LIAAVAATIASLALAWAREGAVADLLNGVLDHVRSLFGMG
Ga0209861_10066713	3300027332	Groundwater Sand	MRGRYYGPSLIAAVAATIAALALAWARNGAIAGLLDGVLDHVRALFGIA
Ga0209795_102067062	3300027718	Agave	MSSECGSQTTEYALIMVVAATIAALALAWARNGAIAGLLDGVLDHVRALFGIA
Ga0209795_102263132	3300027718	Agave	ALIMVVAATIASLALAWARNGAVAGLLDGVLDHVRSLFGMG
Ga0209859_10068403	3300027954	Groundwater Sand	VAATIAALALAWARNGAIAGLLDGVLEHVRALFGIA
Ga0209853_11534382	3300027961	Groundwater Sand	MIPPATIAALALAWARNGAVAGLLSGVLDHVRELFGIG
Ga0307321_10883771	3300028704	Soil	LAAENCSQTTEYALIMVVAATIASLALAWARNGAIADLLDGVMDHVRTLFGIG
Ga0307276_100341013	3300028705	Soil	AAENGSQTTEYALIMVVAATIASLALAWARNGAIADLLDGVLDHVRTLFGVG
Ga0307295_101005833	3300028708	Soil	TGDRYYGPSLMAAVAATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0307293_101219561	3300028711	Soil	VPNLEPPYALIMVVAATIASLALAWAHNGAIADLLDGVLDHVRTLFGVG
Ga0307298_101416502	3300028717	Soil	QTTEYALIMVVAATIASLALAWARNGAIADLLDGVMDHVRTLFGIG
Ga0307317_1000089411	3300028720	Soil	MVVAATIASLALAWARNGAIAGLLDGVLDHVRSLFGMG
Ga0307320_100845963	3300028771	Soil	IMVVAATIASLALAWARNGAIDDLLTGVLDHVRSLFGIG
Ga0307287_102954841	3300028796	Soil	IMVVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0307286_103401881	3300028876	Soil	AVAATIASLALAWARNGAIADLLDGVLDHVRTLFGIG
Ga0307277_102086203	3300028881	Soil	LIAAVAATIASLALAWARKGAVADLLNGVLDHVRSLFGMG
Ga0247827_108397401	3300028889	Soil	YALLMIVAATLAMLALAWARQGAIKALLDAVMDKVLALFGIGRG
Ga0247826_115248792	3300030336	Soil	QTTEYALIMVVAATIASLALAWARNGAIADLLDGVLDHVRSLFGMG
Ga0268243_11585312	3300030510	Soil	GTSPNYHPSLTAAVAATIASLALAWARQGAIADLLDGVLDHVRSLFGIG
Ga0307408_1000286686	3300031548	Rhizosphere	LMAVVAATIASLALAWARQGAIADLLDGVLDHVRSLFGIG
Ga0307408_1014467282	3300031548	Rhizosphere	LIAAVAATIASLALAWARQGAIAELLDGVLDHVRSLFGIG
Ga0307405_100163895	3300031731	Rhizosphere	LIAAVAATIASLALAWARNGAVAELLDGVLDHVRALFGIG
Ga0307405_100209886	3300031731	Rhizosphere	LIAAVAATIASLALAWARQGAIADLLDGVLDHVRSLFGIG
Ga0307405_101330981	3300031731	Rhizosphere	LIAAVAATIASLALAWARNGAVADLLNGVLDHVRSLFGMG
Ga0307405_102327423	3300031731	Rhizosphere	LIAAVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0307405_107409461	3300031731	Rhizosphere	LIAAVAATIASLALAWARKGAVAGLLDGVLDQVRSLFGIG
Ga0307405_116337262	3300031731	Rhizosphere	LIAAVAATIASLALAWARNGAIGDLLDGVLDHVRSLFGMG
Ga0307413_104660991	3300031824	Rhizosphere	LIMVVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0307413_105342603	3300031824	Rhizosphere	LIAAVAATIASLALAWARQGAIAELLDGVLDHVRALFGIG
Ga0307410_100374891	3300031852	Rhizosphere	ALIMVVAATIASLALAWARNGAVADLLNGVLDHVRSLFGMG
Ga0307410_100814131	3300031852	Rhizosphere	RTGDRYYGPSLMAAVAATIASLALAWARQGAIADLLDGVLDHVRSLFGIG
Ga0307410_103027013	3300031852	Rhizosphere	IMVVAATIASLALAWARNGAVAGLLDGVLDHVRSLFGMG
Ga0307406_100024572	3300031901	Rhizosphere	MAVVAATIASLALAWARQGAIADLLDGVLDHVRSLFGIG
Ga0307407_100747052	3300031903	Rhizosphere	MAAVAATIASLALAWARQGAIADLLDGVLDHVRSLFGIG
Ga0307407_104332261	3300031903	Rhizosphere	RERYYGLSLIAAVAATIASLALAWARQGAIAELLDGVLDHVRSLFGIG
Ga0307407_108872533	3300031903	Rhizosphere	RYYRPSLIAAVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0307407_112159351	3300031903	Rhizosphere	MAVVAATIASLALAWARNGAIGDLLDGVLDHVRSLFGMG
Ga0308175_1008626042	3300031938	Soil	LIAAVAATIASLALAWARNGAIADLLDGVLDHVRTLFGIG
Ga0307409_1001648381	3300031995	Rhizosphere	LIAAVAATIASLALAWARQGAIAELLDGVLDHVQSLSGSAEP
Ga0308176_109077293	3300031996	Soil	ALIMVVAATIASLALAWARNGAIADLLDGVLDHVRTLFGIG
Ga0307416_1028804931	3300032002	Rhizosphere	GPSLMAVVAATIASLALAWARQGAIADLLDGVLDHVRSLFGIG
Ga0307414_122734812	3300032004	Rhizosphere	LIAAVAATIASLALAWARNGAIADLLTGVLDHVRSLFGMG
Ga0307411_104603391	3300032005	Rhizosphere	SASSKVARYYRPSLIAAVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0307411_111774561	3300032005	Rhizosphere	LVAETGSQTTEYALILVVAATIASLALAWARQGAIAELLDGVLDHVRSLFGIG
Ga0307411_112001451	3300032005	Rhizosphere	GDRYYGPSLMAAVAATIASLALAWARNGAIGDLLDGVLDHVRSLFGMG
Ga0307415_1001375922	3300032126	Rhizosphere	MLAVAATIASLALAWARQGAIAELLDGVLDHVQSLFGIG
Ga0307415_1001738461	3300032126	Rhizosphere	AAVSATIASLALAWARNGAIADLLTGVLDHVRSLFGIG
Ga0268251_100429261	3300032159	Agave	TTEYALIMVVAATIASLALAWARNGAVADLLNGVLDHVRSLFGMG
Ga0268251_100563273	3300032159	Agave	MSSECGSQTTEYALIMVVAATIAALALAWARNGAIAGLLDGVLDHVRALFGIG
Ga0268251_101395141	3300032159	Agave	ETGPQTTEYALIMVVAATIASLALAWARNGAIADLLNGVLDHVRSLFGMG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076993

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences