Metagenome Family F076997

Basic Information
Family ID	F076997
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	72 residues
Representative Sequence	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKATS
Number of Associated Samples	91
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	35.34 %
% of genes near scaffold ends (potentially truncated)	30.77 %
% of genes from short scaffolds (< 2000 bps)	87.18 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Most Common Taxonomy
Group	Bacteria (54.701 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.932 % of family members)
Environment Ontology (ENVO)	Unclassified (54.701 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (72.650 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.27% Coil/Unstructured: 72.73%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00072	Response_reg	24.79
PF11752	DUF3309	7.69
PF00011	HSP20	5.98
PF01471	PG_binding_1	5.13
PF13701	DDE_Tnp_1_4	0.85
PF03631	Virul_fac_BrkB	0.85
PF05239	PRC	0.85
PF02586	SRAP	0.85
PF11154	DUF2934	0.85
PF00899	ThiF	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	5.98
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.85
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.70 %
Unclassified	root	N/A	45.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.70 %
Unclassified	root	N/A	45.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.70 %
Unclassified	root	N/A	45.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	15.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.56 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	15.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.56 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	14.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.56 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	13.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.56 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1.71 %
Deltaproteobacteria bacterium RBG_19FT_COMBO_46_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_46_12	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002886\|JGI25612J43240_1032413	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300002907\|JGI25613J43889_10069096	Not Available	960	Open in IMG/M
3300005276\|Ga0065717_1016922	Not Available	505	Open in IMG/M
3300005347\|Ga0070668_100153419	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1864	Open in IMG/M
3300005353\|Ga0070669_101554029	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	576	Open in IMG/M
3300005366\|Ga0070659_101008610	Not Available	731	Open in IMG/M
3300005444\|Ga0070694_100584241	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005457\|Ga0070662_100099932	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300005459\|Ga0068867_100493448	Not Available	1051	Open in IMG/M
3300005459\|Ga0068867_100925753	Not Available	786	Open in IMG/M
3300005526\|Ga0073909_10125468	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005526\|Ga0073909_10620254	Not Available	536	Open in IMG/M
3300005539\|Ga0068853_102421824	Not Available	508	Open in IMG/M
3300005543\|Ga0070672_100412693	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300006844\|Ga0075428_100151349	All Organisms → cellular organisms → Bacteria	2521	Open in IMG/M
3300006844\|Ga0075428_101172522	Not Available	810	Open in IMG/M
3300006847\|Ga0075431_101638881	Not Available	601	Open in IMG/M
3300006854\|Ga0075425_100889019	Not Available	1019	Open in IMG/M
3300006871\|Ga0075434_100321203	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300006881\|Ga0068865_100750820	Not Available	838	Open in IMG/M
3300009094\|Ga0111539_12041093	Not Available	665	Open in IMG/M
3300009156\|Ga0111538_12688465	Not Available	624	Open in IMG/M
3300009162\|Ga0075423_10367214	Not Available	1510	Open in IMG/M
3300009162\|Ga0075423_10960998	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300009176\|Ga0105242_10060305	All Organisms → cellular organisms → Bacteria	3116	Open in IMG/M
3300009553\|Ga0105249_10169337	Not Available	2117	Open in IMG/M
3300009553\|Ga0105249_10934871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	935	Open in IMG/M
3300009553\|Ga0105249_11573597	Not Available	730	Open in IMG/M
3300010373\|Ga0134128_12184815	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300010399\|Ga0134127_13272442	Not Available	530	Open in IMG/M
3300010400\|Ga0134122_10585508	Not Available	1028	Open in IMG/M
3300010403\|Ga0134123_10106522	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300012200\|Ga0137382_10329866	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1068	Open in IMG/M
3300012200\|Ga0137382_10704003	Not Available	724	Open in IMG/M
3300012201\|Ga0137365_10595969	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	810	Open in IMG/M
3300012203\|Ga0137399_10030697	All Organisms → cellular organisms → Bacteria	3694	Open in IMG/M
3300012203\|Ga0137399_10892165	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300012285\|Ga0137370_10237807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1076	Open in IMG/M
3300012479\|Ga0157348_1025204	Not Available	534	Open in IMG/M
3300012480\|Ga0157346_1007599	Not Available	727	Open in IMG/M
3300012484\|Ga0157333_1009761	Not Available	692	Open in IMG/M
3300012486\|Ga0157331_1006575	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300012486\|Ga0157331_1019789	Not Available	589	Open in IMG/M
3300012487\|Ga0157321_1001512	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1196	Open in IMG/M
3300012492\|Ga0157335_1025603	Not Available	589	Open in IMG/M
3300012498\|Ga0157345_1012964	Not Available	760	Open in IMG/M
3300012499\|Ga0157350_1001264	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300012501\|Ga0157351_1007373	Not Available	934	Open in IMG/M
3300012506\|Ga0157324_1019308	Not Available	677	Open in IMG/M
3300012511\|Ga0157332_1010660	Not Available	918	Open in IMG/M
3300012511\|Ga0157332_1021339	Not Available	757	Open in IMG/M
3300012512\|Ga0157327_1002167	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1322	Open in IMG/M
3300012514\|Ga0157330_1000266	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300012514\|Ga0157330_1001254	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300012514\|Ga0157330_1039518	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300012517\|Ga0157354_1002302	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300012519\|Ga0157352_1001836	Not Available	1650	Open in IMG/M
3300012582\|Ga0137358_10973931	Not Available	551	Open in IMG/M
3300012685\|Ga0137397_10044899	Not Available	3161	Open in IMG/M
3300012685\|Ga0137397_10439687	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300012685\|Ga0137397_10924213	Not Available	646	Open in IMG/M
3300012922\|Ga0137394_10043628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3685	Open in IMG/M
3300012922\|Ga0137394_10137247	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300012922\|Ga0137394_10230560	Not Available	1583	Open in IMG/M
3300012922\|Ga0137394_10357533	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300012922\|Ga0137394_10660636	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300012922\|Ga0137394_10692325	Not Available	858	Open in IMG/M
3300012922\|Ga0137394_11237159	Not Available	610	Open in IMG/M
3300012923\|Ga0137359_10170652	Not Available	1942	Open in IMG/M
3300012924\|Ga0137413_10362141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1032	Open in IMG/M
3300012924\|Ga0137413_11091141	Not Available	631	Open in IMG/M
3300012925\|Ga0137419_10081062	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300012927\|Ga0137416_10301677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1328	Open in IMG/M
3300012929\|Ga0137404_10098525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2353	Open in IMG/M
3300012941\|Ga0162652_100038456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_46_12	745	Open in IMG/M
3300012944\|Ga0137410_10229550	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300012944\|Ga0137410_11238877	Not Available	643	Open in IMG/M
3300012957\|Ga0164303_10385207	Not Available	860	Open in IMG/M
3300012957\|Ga0164303_10665080	Not Available	696	Open in IMG/M
3300012958\|Ga0164299_10590641	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300012984\|Ga0164309_10986050	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300012986\|Ga0164304_11278417	Not Available	596	Open in IMG/M
3300013297\|Ga0157378_10835856	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300013306\|Ga0163162_10260943	Not Available	1864	Open in IMG/M
3300013306\|Ga0163162_12071093	Not Available	653	Open in IMG/M
3300015242\|Ga0137412_10257991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1377	Open in IMG/M
3300015372\|Ga0132256_101685393	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300015373\|Ga0132257_101135592	Not Available	987	Open in IMG/M
3300015373\|Ga0132257_101319969	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	916	Open in IMG/M
3300015374\|Ga0132255_102809393	Not Available	744	Open in IMG/M
3300017792\|Ga0163161_10083908	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300018031\|Ga0184634_10162995	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300018051\|Ga0184620_10181665	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300018073\|Ga0184624_10002500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5490	Open in IMG/M
3300018074\|Ga0184640_10178054	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300018081\|Ga0184625_10192566	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300018469\|Ga0190270_11616925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300019997\|Ga0193711_1026406	Not Available	733	Open in IMG/M
3300021344\|Ga0193719_10217678	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300025916\|Ga0207663_10385782	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300025930\|Ga0207701_10580477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	955	Open in IMG/M
3300025933\|Ga0207706_10303413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1391	Open in IMG/M
3300025961\|Ga0207712_10242056	Not Available	1454	Open in IMG/M
3300026118\|Ga0207675_101668487	Not Available	657	Open in IMG/M
3300026285\|Ga0209438_1076692	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300026304\|Ga0209240_1100177	Not Available	1038	Open in IMG/M
3300026320\|Ga0209131_1091038	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300028536\|Ga0137415_10267437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1516	Open in IMG/M
3300031170\|Ga0307498_10299867	Not Available	601	Open in IMG/M
3300031231\|Ga0170824_119115405	All Organisms → cellular organisms → Bacteria → Terrabacteria group	659	Open in IMG/M
3300031474\|Ga0170818_113624155	All Organisms → cellular organisms → Bacteria → Terrabacteria group	785	Open in IMG/M
3300031720\|Ga0307469_10394863	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300031740\|Ga0307468_101281060	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300032174\|Ga0307470_10738708	Not Available	755	Open in IMG/M
3300032205\|Ga0307472_101828574	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300034417\|Ga0364941_044794	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.81%
Host-Associated	Host-Associated	34.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.54%
Plants	Host-Associated → Plants	34.19%
Aquatic	Environmental → Aquatic	4.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.38%
Sediment	Environmental → Aquatic → Sediment	4.27%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.42%
Loam	Environmental → Terrestrial → Soil → Loam	1.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.71%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	5.13%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.27%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	4.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012479	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.yng.030610	Environmental	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012484	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510	Environmental	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25612J43240_10324131	3300002886	Grasslands Soil	NIKAAENLVSGDFVEFIKDRDGELSCKKALELSSISAIAARDIGEGEMLTFDTNGDTKDLTTPQKAI*
JGI25613J43889_100690962	3300002907	Grasslands Soil	MRWNIKASENFISGDFVEFAADPDGKLRCKKALELMAIKAVAARNIAEGEMLTFATDDDTHDLMSLSGMVEIPCLEAK*
Ga0065717_10169222	3300005276	Arabidopsis Rhizosphere	MLWNIKAVENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVTSRP*
Ga0070668_1001534191	3300005347	Switchgrass Rhizosphere	ENLISGDFVEFIKDGDGNLSCKKALELGSITAVAARDIAEGELLTFDTNGDTKDLTTPQKATS*
Ga0070669_1015540291	3300005353	Switchgrass Rhizosphere	KSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKATS*
Ga0070659_1010086101	3300005366	Corn Rhizosphere	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKD
Ga0070694_1005842411	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	KSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVTSRP*
Ga0070662_1000999325	3300005457	Corn Rhizosphere	MLWNIKAAENFISGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKATS*
Ga0068867_1004934481	3300005459	Miscanthus Rhizosphere	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKATS*
Ga0068867_1009257531	3300005459	Miscanthus Rhizosphere	MELKAAENLVSGDFVEFITDRDGKLSCKKALELARISAIAARDIAEEVLTFDTNGDTKDLKTPQKTTSLP*
Ga0073909_101254681	3300005526	Surface Soil	AENLISGDFVEFIKDGDGNLSCKKALELGSITAVAVRDIAESEILTFYTNGDTKDLTTPQKATS*
Ga0073909_106202541	3300005526	Surface Soil	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVTSRP*
Ga0068853_1024218242	3300005539	Corn Rhizosphere	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVTLRP*
Ga0070672_1004126932	3300005543	Miscanthus Rhizosphere	MLWNIKAAENLISGDFVEFIKDGDGNLSCKKALELGSITTIAARDIAEGEMLTFDTNGDTKI*
Ga0075428_1001513492	3300006844	Populus Rhizosphere	MNFARTVQQREKSMLWNIKAAENLVSGDFVEFITDQDGKLSCKKALELASISAIAARDIAEGEMLRFDTNGNTKDLTTPQKATSRP*
Ga0075428_1011725222	3300006844	Populus Rhizosphere	MLWNIKAGENLVCGAFVEFITDRDGKLSCKKALELARISAVAARDIAEGEVLSFDTNGDTKDFKTPQKATSRP*
Ga0075431_1016388811	3300006847	Populus Rhizosphere	MLWNIKAAENLISGDFVEFIKDRDGELSCKKASELTSISAIAARDIAEGEMLIFDTNGGSKDLTTPQKAI*
Ga0075425_1008890192	3300006854	Populus Rhizosphere	MLWNIKVENLISGDFVEFIKDGDGNLSCKKALELGSITAVAARDIAEGELLTFDTNGDTKDLTTPQKATS*
Ga0075434_1003212033	3300006871	Populus Rhizosphere	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTRDLTTPQKVTSRP*
Ga0068865_1007508202	3300006881	Miscanthus Rhizosphere	MLWNIKVENLISGDFVEFIKDGDGNLSCKKALELGSITAVAARDIAEGEMLTFDTNGDTKDLTAPPKATS*
Ga0111539_120410931	3300009094	Populus Rhizosphere	MLSNIQAAENLISGDFVEFIKDGEGKLSCKKALELGSIRAIVARDIAEGEILSFDTNGDTNDLTTPQKTTSRS*
Ga0111538_126884651	3300009156	Populus Rhizosphere	MLWNIKVENLISGDFVEFIKDGDGNLSCKKGLELGSIPTIAARDIAEGELLTFDTNGDTKDLTTPQKATS*
Ga0075423_103672141	3300009162	Populus Rhizosphere	MLWNIKAVENLVSGDSVEFITDRDGKLSCKKALELKSISAIAARDIAEGEVLSFDTNGDTKDLKTPQKTTSLP*
Ga0075423_109609981	3300009162	Populus Rhizosphere	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIVARDIAAGEMLTFDTNGDTRDLTTPQKVTSRP*
Ga0105242_100603054	3300009176	Miscanthus Rhizosphere	MLWNIKAENLLSAIKDGDGNLSCKKALELGSITAVAARDIAEGELLTFDTNGDTKDLTTPQKATS*
Ga0105249_101693372	3300009553	Switchgrass Rhizosphere	MLWNIKVENLISGDFVEFIKDGDGNLSCKKALELGSITTIAARDIVEGELLTFDTNGDTKDLTTPQKATS*
Ga0105249_109348711	3300009553	Switchgrass Rhizosphere	MLWNIKAAENFISGDFVEFITDRDGKLSCKKALELASITAIAARDIAEGEMLTFDTNGDT
Ga0105249_115735971	3300009553	Switchgrass Rhizosphere	MLWNIKAAENLFSGDFVEFISDRDGKLSCKRALDLKSISAIAARNIAEGEVLSFDTNGDTKDL
Ga0134128_121848152	3300010373	Terrestrial Soil	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTN
Ga0134127_132724421	3300010399	Terrestrial Soil	MLWNIKVENLISAIKDGDGNLSCKKALELGSITTIAARDIAEGEMLTFDTNGDTKD
Ga0134122_105855083	3300010400	Terrestrial Soil	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTRDLTTPQKVTSRP*
Ga0134123_101065224	3300010403	Terrestrial Soil	VSGDFVEFITDRDGKLSCKKALELKSISAIAAREVAEGEMLFDTSGDTKDLTTPQNPISRP*
Ga0137382_103298662	3300012200	Vadose Zone Soil	MLWNIKAAENLISGDFVEFVNDRDGKLTCKKALELATISAIAARDIAEGETLTFDTNGDTKDLTTPPKATS*
Ga0137382_107040031	3300012200	Vadose Zone Soil	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELGSISAIAARDIAEGEMLAFDTNGDTEDLMTPQKVTSRP*
Ga0137365_105959693	3300012201	Vadose Zone Soil	VEYKSCRNLISGDFVEFIKDEEGKLSCKKALELESISAIAARNIAEGEMLTFDTNGDTEDLTTPQKATSRQ*
Ga0137399_100306972	3300012203	Vadose Zone Soil	MLWNIKAAENLISGDFVEFVTDRDGKLICKKALELATISAIAARDIAEGEMLRFDTNGDTEDLTTPQKASPQQ*
Ga0137399_108921653	3300012203	Vadose Zone Soil	RNLISGDFVEFIKDEEGKLSCKKALELESISAIAARNIAEGEMLTFDTNGDTEDLTTPQKATSRQ*
Ga0137370_102378072	3300012285	Vadose Zone Soil	MLWNIKATENLISGDFVEFIKDEEGKLSCKKALELESISAIAARNIAEGEMLTFDTNGDTEDLTTPQKATSRQ*
Ga0157348_10252042	3300012479	Unplanted Soil	LQYSVILWNIKVENLISGDFVEFIKDGDGNLSCKKAFELGSITTIAARDIAEGEMLTFDTNGD
Ga0157346_10075992	3300012480	Arabidopsis Rhizosphere	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFD
Ga0157333_10097612	3300012484	Soil	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVTSRP*
Ga0157331_10065752	3300012486	Soil	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQNPISRP*
Ga0157331_10197891	3300012486	Soil	MLWNIKVENLISGDFVEFIKDGDGNLSCKKAFELGSITTIAARDIAEGEMLTFDTNGDTKDLTTPQKATTKSSRREPALRR*
Ga0157321_10015121	3300012487	Arabidopsis Rhizosphere	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDANGDTKDLTTPQKVTSRP*
Ga0157335_10256031	3300012492	Arabidopsis Rhizosphere	MLWNIKVENLISGDFVEFIKDGDGNLSCKKAFELGSITVVATRDIAEGELLTFDTNGDTKDLTTPQKATS*
Ga0157345_10129642	3300012498	Arabidopsis Rhizosphere	MLWNIKVENLISGDFVEFIKDGDGNLSCKKALELGSITTIAARDIAEGEMLTFDTNGDTRDLTTPQKVTSRP*
Ga0157350_10012642	3300012499	Unplanted Soil	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKATS*
Ga0157351_10073731	3300012501	Unplanted Soil	MLWNIKAENLISGDFVEFIKDGDGNLSCNKALELGSITAVAARDIAEGELLTFDTNGDTKDLTTPQKATS*
Ga0157324_10193082	3300012506	Arabidopsis Rhizosphere	MLWNIKVENLISGDFVEFIKDGDGNLSCKKALELGLITAVAARDIAEGELLTFDTNGDTKDLTTPQKATS*
Ga0157332_10106602	3300012511	Soil	MLWNIKAAENLISGDFVEFIKDGDGNLSCNKALELGSITAVAARDIAEGELLTFDTNGDTKDLTTPQKATS*
Ga0157332_10213391	3300012511	Soil	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTRDLTTPQKVTSRR*
Ga0157327_10021673	3300012512	Arabidopsis Rhizosphere	MLWNIKTAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTRDLTTPQKVTSRP*
Ga0157330_10002661	3300012514	Soil	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELKSISAIAARDIAEGEMLTFDTNGDTKDLTTPQKATSRP*
Ga0157330_10012543	3300012514	Soil	MLWNIKVENLISAIKDGDGNLSCKKALELGSITAVAARDIAEGESLTFDTNGDTKDLTTPQKATS*
Ga0157330_10395182	3300012514	Soil	SCWKDKSNLIFEAAQLEKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVTSRR*
Ga0157354_10023021	3300012517	Unplanted Soil	VIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTRDLTTPQKVTSRP*
Ga0157352_10018362	3300012519	Unplanted Soil	MLWNIKAENLISAIKDGDGNLSCKKALELGSITAVAARDIAEGELLTFDTNGDTKDLTTPQKATS*
Ga0137358_108726491	3300012582	Vadose Zone Soil	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLT
Ga0137358_109739311	3300012582	Vadose Zone Soil	MPWNIKAAENLISGDFVEFIKDRGGELSCKKASELASISAIAARDIAAGETLSFDTNGDTKDLATPQRQSSAKTKESKFRLRIR*
Ga0137397_100448995	3300012685	Vadose Zone Soil	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAITARDIAEGEMLTFDTNGDTKDLTTPQKVTSRP*
Ga0137397_104396872	3300012685	Vadose Zone Soil	MLWKIKAAENLISGDFVEFIKDQDGELSCKKALELSSISAIAARDIGEGEMLTFDTNGDTKDLTTPQKAI*
Ga0137397_109242132	3300012685	Vadose Zone Soil	MLWNIKAAENLVSGDFVEFISDRNGKLSCKKALELGSISAIAARDIAEGEMLAFDTNGDTEDLMTPQKVTSRP*
Ga0137394_100436285	3300012922	Vadose Zone Soil	MPWNIKAAENLISGDFVEFIKDRDGELSCKKASELASISAIAARDIAAGETLSFDTNGDTKDLATPQRQSSAKTKESKFRLRIR*
Ga0137394_101372472	3300012922	Vadose Zone Soil	MLWNIKAAENLISGDFVEFITDRDGKLICKKALELATISAIAARDIAEGEMLRFDTNGDTEDLTTPQKASPQR*
Ga0137394_102305601	3300012922	Vadose Zone Soil	MLWNIKAAENLVSGDFVEFIKDRDGELSCKKALELSSISAIAARDIGEGEMLTFDTNGDTKDLTTPQKAI*
Ga0137394_103575332	3300012922	Vadose Zone Soil	MLWNIKAAENLISGDFVEFIKDRDGELSCKKALELSSISAIAARDIGEGEILTFDTNGDTKDLTTPQKAI*
Ga0137394_106606361	3300012922	Vadose Zone Soil	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLAFDTNGDTEDLMTPQKVTSRP*
Ga0137394_106923252	3300012922	Vadose Zone Soil	MLWKIKAAENMVSGDFVEFTNDQNGKLSCKKTLELVSIRATAARDIGKGEMLIFDTNGGTKDLT
Ga0137394_112371591	3300012922	Vadose Zone Soil	MLWNIKAAENLVSGDFVEFISDRNGKLSCKRALELGSISAIAARDIAEGETLTFDTKDDTEDLRKAHKETS*
Ga0137359_101706522	3300012923	Vadose Zone Soil	MPWNIKAAENLISGDFVEFIKDRGGELSCKKASELASISAIAARDIATGETLSFDTNGDTKDLATPQRQSSAKTKESKFRLRIR*
Ga0137413_103621412	3300012924	Vadose Zone Soil	MLWNIKAAENLISGDFVEFVNDRDGKLTCKKALELATIRAIAARDIAEGETLTFDTNGDTKDLTTPPKATS*
Ga0137413_110911411	3300012924	Vadose Zone Soil	MLWNIKAAENLISGDFVEFITDRDGKLICKKALELATISAIAARDIAEGEMLRFDTNGDTEDLTTPQKASPQQ*
Ga0137419_100810622	3300012925	Vadose Zone Soil	MLWNIKAAENLISGDFVEFVTDRDGKLICKKALELATISAIAARDIAEGEMLRFDTNGDTEDLTTPQKASPQR*
Ga0137416_103016771	3300012927	Vadose Zone Soil	NAVEYKSCRNLISGDFVEFIKDEEGKLSCKKALELESISAIAARNIAEGEMLTFDTNGDTEDLTTPQKATSRQ*
Ga0137404_100985251	3300012929	Vadose Zone Soil	SCRNLISGDFVEFIKDEEGKLTCKKALELESISAIAARNIAEGEMLTFDTNGDTEDLTTPQKATSRQ*
Ga0162652_1000384562	3300012941	Soil	MLWTIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAQGEMLNFDTNGDTKDLTTPQKATSRP*
Ga0137410_102295503	3300012944	Vadose Zone Soil	MLWNIKAAENLISGDFVEFVTDRDGKLICKKALELATISAIAARDIAEGEMLRFDTNGDT
Ga0137410_112388771	3300012944	Vadose Zone Soil	SVMPWNIKAAENLISGDFVEFIKDRDGELSCKKASELASISAIAARDIAAGETLSFDTNGDTKDLATPQRQSSAKTKESKFRLRIR*
Ga0164303_103852071	3300012957	Soil	MLSNIQAAENLISGDFVEFIKDGEGKLSCKKALELGSIRAIVARDIAEGEMLSFDTNGDTKDLTKPQNQ
Ga0164303_106650802	3300012957	Soil	VRFIRNLQYSLMLWNIKAAENLISGDFVEFIKDGDGNLSCKKALELGSITAVAARDIAEGEMLTFDTNGDTKDLTTPQKATS*
Ga0164299_105906413	3300012958	Soil	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLNFDTNGDTKD
Ga0164309_109860501	3300012984	Soil	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVTSRR*
Ga0164304_112784171	3300012986	Soil	MLSNIQAAENLVSGDFVEFIKDGEGKLSCKKALELASISAIAARDIAEGEMLTFDANGDTKDLTTPQKVTSRP*
Ga0157378_108358562	3300013297	Miscanthus Rhizosphere	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEILTFDTNGDTRDLTTPQKVTSRP*
Ga0163162_102609431	3300013306	Switchgrass Rhizosphere	MLWNIKAAENFISGDFVEFITDRDGKLSCKKALELASITAIAARDIAEGEMLTFDTNGDTEDLTTPQKVTS*
Ga0163162_120710931	3300013306	Switchgrass Rhizosphere	MLWNIKAAENLVPGDFVEFITDRDGKLSCKKALELARISAIAARDIAEGEVLTFDTNGDTKDLKTPQKTTSLP*
Ga0137412_102579912	3300015242	Vadose Zone Soil	MLWNIKAAENLISGDFVEFVNDRDGKLTCKKALELATIRAIAARDIAEGEMLRFDTNGDTEDLTTPQKASPQR*
Ga0132256_1016853931	3300015372	Arabidopsis Rhizosphere	AAENLFSGDFVEFITDRDGKLSCKKALELKTINAIAARDIAEGEVLSFDTNGDTKDLKTPQKATSLP*
Ga0132257_1011355921	3300015373	Arabidopsis Rhizosphere	MSVGGSSGDFVEFITDRGGKAKLQKSFELKSISAIAAREVAEGECSLIRTDTKDLTTPQNPISRP*
Ga0132257_1013199691	3300015373	Arabidopsis Rhizosphere	MLWNIKAAENLVSGDFVEFISDRDGKLSCKRALELKLISAIAARDIAEGEVLSFDTNGDTKDLKTPQKATSLP*
Ga0132255_1028093931	3300015374	Arabidopsis Rhizosphere	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELKSISAIAARDIAEGEMLTFDTNGDTKDLTTPQKATSRP*
Ga0163161_100839085	3300017792	Switchgrass Rhizosphere	MLWNIKVENLISGDFVEFIKDGDGNLSCKKALELGSITTIAARDIAEGETLTFDTNGDTKDLTTPQKATS
Ga0184634_101629952	3300018031	Groundwater Sediment	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVTSRP
Ga0184620_101816651	3300018051	Groundwater Sediment	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLNFDTNGDTKDLTTPQKATSRP
Ga0184624_1000250010	3300018073	Groundwater Sediment	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVTSRL
Ga0184640_101780541	3300018074	Groundwater Sediment	MLSNIQAAENLISGDFVEFIKDGEGKLSCKKALELESIRAIVARDIAEGEMLSFDTNGDTKDLTKPQNQ
Ga0184625_101925664	3300018081	Groundwater Sediment	NLVPGDFVEFITDRDGKLSCKKALELARISAIAARDIAEGEVLSFDTNGDTKDLKTPQKATSLP
Ga0190270_116169251	3300018469	Soil	MLWNIKAAENLIAGDFVEFIKDADGKLSCKKALELASISAIAARDIADGEMLSFDTNGDTQDLTTPQKGKLALVK
Ga0193711_10264061	3300019997	Soil	MLSNIQAAENLISGDFVEFIKDGEGKLSCKKALELESIRAIVARDIAEGEMLSFDTNGDTKD
Ga0193719_102176781	3300021344	Soil	AQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVTSRP
Ga0207663_103857821	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLSNIQAAENLISGDCVEFIKDGEGKLSCKKALELESIRAIAARDIAEGEMLSFDTNGDTKDLTTPQKQSNGSETAHF
Ga0207701_105804771	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLWNIKAAENFISGDFVEFITDRDGKLSCKKALELASITAIAARDIAEGEMLTFDTNGDTEDLTTPQKVTS
Ga0207706_103034132	3300025933	Corn Rhizosphere	MLWNIKAAENFISGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTRDLTTPQKVTSRP
Ga0207712_102420563	3300025961	Switchgrass Rhizosphere	MLWNIKVENLISGDFVEFIKDGDGNLSCKKALELGSITTIAARDIVEGELLTFDTNGDTKDLTTPQ
Ga0207675_1016684873	3300026118	Switchgrass Rhizosphere	MLWNIKAAENLVSGDFVEFITDRDGKLSCKRALELARISAIAARDIAEGEVLSFDTNGD
Ga0209438_10766921	3300026285	Grasslands Soil	MLWNIKAAENLVSGDFVEFIKDRDGELSCKKALELSSISAIAARDIGEGEMLTFDTNGDTKDLTTPQKAI
Ga0209240_11001771	3300026304	Grasslands Soil	MLWNIKAAENLISGDFVEFITDRDGKLICKKALELATISAIEARDIAEGEMLRFDTNGDTEDLTTPQKASPQQ
Ga0209131_10910382	3300026320	Grasslands Soil	MRWNIKASENFISGDFVEFAADPDGKLRCKKALELMAIKAVAARNIAEGEMLTFATDDDTHDLMSLSGMVEIPCLEAK
Ga0137415_102674371	3300028536	Vadose Zone Soil	MLWNIKAAENLISGDFVEFIKDRDGELSCKKALELSSISAIAARDIGEGEMLTFDTNGDTEDLTTPQKATSRQ
Ga0307498_102998671	3300031170	Soil	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDANGDTKDLTTPQKVTSRP
Ga0170824_1191154051	3300031231	Forest Soil	MLWNIKAAENLVSGDFVEFITDRDGNLSCKKALELASISAIAARDIAEGEMLRYDANGDTEDLTTPQKATSRP
Ga0170818_1136241552	3300031474	Forest Soil	MLWNIKAAENLVSGDFVEFITDRDGNLSCKKALELASISAIAARDIAEGEMLNFDTNGDTKALTTPQKTTSRP
Ga0307469_103948631	3300031720	Hardwood Forest Soil	MLWNIKAAENLVSGNFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKVT
Ga0307468_1012810601	3300031740	Hardwood Forest Soil	MLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTRDLTTPQKVTSRP
Ga0307470_107387081	3300032174	Hardwood Forest Soil	MLWNIKAENLISAIKDGDGNLSCKKALELGSITAVAARDIAEGELLTFDTNGDTKDLTTPQKATS
Ga0307472_1018285741	3300032205	Hardwood Forest Soil	MLWNIKAAEKLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNGDTKDLTTPQKATSRP
Ga0364941_044794_2_226	3300034417	Sediment	LIFEAAQREKSMLWNIKAAENLVSGDFVEFITDRDGKLSCKKALELASISAIAARDIAEGEMLTFDTNSDTKDLT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076997

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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