Metagenome / Metatranscriptome Family F077118

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077118
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	94 residues
Representative Sequence	MAAFLVVYDPSKGKEHEVVAALHRWGATRIFRGAWVIEFDSTADLARRALVAVGGAITCAIVEIKPNGDHAEMGAEPAGRDALRRLGASVSAP
Number of Associated Samples	97
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.83 %
% of genes near scaffold ends (potentially truncated)	31.62 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.538 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.658 % of family members)
Environment Ontology (ENVO)	Unclassified (29.060 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.795 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.40% β-sheet: 18.18% Coil/Unstructured: 50.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF04392	ABC_sub_bind	2.56
PF13505	OMP_b-brl	1.71
PF01381	HTH_3	1.71
PF00239	Resolvase	1.71
PF13546	DDE_5	1.71
PF13417	GST_N_3	0.85
PF00550	PP-binding	0.85
PF13467	RHH_4	0.85
PF06823	DUF1236	0.85
PF01042	Ribonuc_L-PSP	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.56
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.71
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.71
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
All Organisms	root	All Organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
cellular organisms	root	All Organisms → cellular organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.04 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	25.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.08 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1050734	Not Available	738	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10034557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1355	Open in IMG/M
3300000955\|JGI1027J12803_100416673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300001545\|JGI12630J15595_10085043	Not Available	621	Open in IMG/M
3300002906\|JGI25614J43888_10037544	Not Available	1511	Open in IMG/M
3300002910\|JGI25615J43890_1027362	Not Available	942	Open in IMG/M
3300004633\|Ga0066395_10254770	Not Available	942	Open in IMG/M
3300005177\|Ga0066690_10436536	Not Available	887	Open in IMG/M
3300005178\|Ga0066688_10675766	Not Available	659	Open in IMG/M
3300005181\|Ga0066678_10655981	Not Available	699	Open in IMG/M
3300005186\|Ga0066676_10367360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	965	Open in IMG/M
3300005187\|Ga0066675_10470236	Not Available	937	Open in IMG/M
3300005332\|Ga0066388_100562871	Not Available	1768	Open in IMG/M
3300005332\|Ga0066388_100982979	Not Available	1411	Open in IMG/M
3300005332\|Ga0066388_101877307	Not Available	1068	Open in IMG/M
3300005332\|Ga0066388_106742623	Not Available	578	Open in IMG/M
3300005363\|Ga0008090_10158812	Not Available	644	Open in IMG/M
3300005447\|Ga0066689_10106343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1617	Open in IMG/M
3300005467\|Ga0070706_100166623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2057	Open in IMG/M
3300005468\|Ga0070707_102035931	Not Available	542	Open in IMG/M
3300005518\|Ga0070699_100567436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1034	Open in IMG/M
3300005555\|Ga0066692_10934870	Not Available	531	Open in IMG/M
3300005556\|Ga0066707_11001260	Not Available	510	Open in IMG/M
3300005559\|Ga0066700_10245109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1251	Open in IMG/M
3300005559\|Ga0066700_11116770	Not Available	515	Open in IMG/M
3300005576\|Ga0066708_10791094	Not Available	596	Open in IMG/M
3300005598\|Ga0066706_10811123	Not Available	737	Open in IMG/M
3300005713\|Ga0066905_100264828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1329	Open in IMG/M
3300005713\|Ga0066905_100624309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300005764\|Ga0066903_103365074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300005764\|Ga0066903_108766161	Not Available	514	Open in IMG/M
3300005764\|Ga0066903_109032116	Not Available	504	Open in IMG/M
3300006028\|Ga0070717_10283420	Not Available	1470	Open in IMG/M
3300006794\|Ga0066658_10044379	Not Available	1881	Open in IMG/M
3300006797\|Ga0066659_10922114	Not Available	730	Open in IMG/M
3300006800\|Ga0066660_10429344	Not Available	1099	Open in IMG/M
3300009012\|Ga0066710_101180495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1185	Open in IMG/M
3300009012\|Ga0066710_101378041	Not Available	1093	Open in IMG/M
3300009090\|Ga0099827_11927072	Not Available	515	Open in IMG/M
3300009137\|Ga0066709_101127745	Not Available	1154	Open in IMG/M
3300009792\|Ga0126374_10410313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	950	Open in IMG/M
3300010043\|Ga0126380_10703691	Not Available	813	Open in IMG/M
3300010043\|Ga0126380_11116576	Not Available	673	Open in IMG/M
3300010046\|Ga0126384_11078839	Not Available	735	Open in IMG/M
3300010046\|Ga0126384_11130753	Not Available	719	Open in IMG/M
3300010047\|Ga0126382_10584731	Not Available	916	Open in IMG/M
3300010048\|Ga0126373_10484199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1277	Open in IMG/M
3300010337\|Ga0134062_10677998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300010358\|Ga0126370_10389036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1141	Open in IMG/M
3300010359\|Ga0126376_11250046	Not Available	760	Open in IMG/M
3300010362\|Ga0126377_12111040	Not Available	640	Open in IMG/M
3300010362\|Ga0126377_13181299	Not Available	530	Open in IMG/M
3300010366\|Ga0126379_11867743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300010376\|Ga0126381_102489311	Not Available	742	Open in IMG/M
3300010398\|Ga0126383_10959816	Not Available	942	Open in IMG/M
3300011271\|Ga0137393_10365918	Not Available	1233	Open in IMG/M
3300012199\|Ga0137383_11179417	Not Available	551	Open in IMG/M
3300012204\|Ga0137374_10068370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3515	Open in IMG/M
3300012204\|Ga0137374_10654669	Not Available	794	Open in IMG/M
3300012205\|Ga0137362_10409541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1174	Open in IMG/M
3300012207\|Ga0137381_10290393	Not Available	1423	Open in IMG/M
3300012209\|Ga0137379_10631866	Not Available	977	Open in IMG/M
3300012210\|Ga0137378_11498792	Not Available	586	Open in IMG/M
3300012211\|Ga0137377_11300773	Not Available	657	Open in IMG/M
3300012350\|Ga0137372_10611363	Not Available	798	Open in IMG/M
3300012350\|Ga0137372_11101436	Not Available	545	Open in IMG/M
3300012356\|Ga0137371_10225436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1465	Open in IMG/M
3300012357\|Ga0137384_10382569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1164	Open in IMG/M
3300012358\|Ga0137368_10109498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2122	Open in IMG/M
3300012917\|Ga0137395_10047550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2681	Open in IMG/M
3300012923\|Ga0137359_10180262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1886	Open in IMG/M
3300012948\|Ga0126375_11800096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300012971\|Ga0126369_10454983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1330	Open in IMG/M
3300015356\|Ga0134073_10233487	Not Available	627	Open in IMG/M
3300016294\|Ga0182041_10774061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	856	Open in IMG/M
3300016319\|Ga0182033_11156784	Not Available	692	Open in IMG/M
3300016371\|Ga0182034_11852032	Not Available	532	Open in IMG/M
3300016422\|Ga0182039_10559828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	995	Open in IMG/M
3300018433\|Ga0066667_10348020	Not Available	1177	Open in IMG/M
3300018468\|Ga0066662_11727915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300019789\|Ga0137408_1436841	Not Available	1150	Open in IMG/M
3300021560\|Ga0126371_10806818	Not Available	1085	Open in IMG/M
3300021560\|Ga0126371_12696036	Not Available	602	Open in IMG/M
3300024288\|Ga0179589_10171024	Not Available	937	Open in IMG/M
3300025910\|Ga0207684_10115844	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300025910\|Ga0207684_10123854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2217	Open in IMG/M
3300026304\|Ga0209240_1005421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4810	Open in IMG/M
3300026304\|Ga0209240_1114411	Not Available	936	Open in IMG/M
3300026319\|Ga0209647_1091562	Not Available	1472	Open in IMG/M
3300026325\|Ga0209152_10048056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1492	Open in IMG/M
3300026446\|Ga0257178_1061173	Not Available	501	Open in IMG/M
3300026547\|Ga0209156_10270320	Not Available	778	Open in IMG/M
3300026550\|Ga0209474_10384653	Not Available	746	Open in IMG/M
3300026551\|Ga0209648_10007060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9642	Open in IMG/M
3300026552\|Ga0209577_10359466	Not Available	1068	Open in IMG/M
3300027748\|Ga0209689_1106596	Not Available	1434	Open in IMG/M
3300027748\|Ga0209689_1170908	Not Available	1001	Open in IMG/M
3300027874\|Ga0209465_10235585	Not Available	915	Open in IMG/M
3300028047\|Ga0209526_10012820	All Organisms → cellular organisms → Bacteria	5791	Open in IMG/M
3300028536\|Ga0137415_10441534	Not Available	1107	Open in IMG/M
3300028878\|Ga0307278_10434790	Not Available	575	Open in IMG/M
3300031543\|Ga0318516_10004568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6159	Open in IMG/M
3300031546\|Ga0318538_10196022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1077	Open in IMG/M
3300031573\|Ga0310915_10512152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300031668\|Ga0318542_10256935	Not Available	889	Open in IMG/M
3300031890\|Ga0306925_10371196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1535	Open in IMG/M
3300031910\|Ga0306923_11906649	Not Available	606	Open in IMG/M
3300031912\|Ga0306921_10168090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2568	Open in IMG/M
3300032001\|Ga0306922_10196730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2163	Open in IMG/M
3300032001\|Ga0306922_10999431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300032008\|Ga0318562_10206021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1140	Open in IMG/M
3300032039\|Ga0318559_10049980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1747	Open in IMG/M
3300032063\|Ga0318504_10264471	Not Available	811	Open in IMG/M
3300032076\|Ga0306924_10246094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2053	Open in IMG/M
3300032076\|Ga0306924_11166994	Not Available	835	Open in IMG/M
3300032261\|Ga0306920_101604069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	925	Open in IMG/M
3300032261\|Ga0306920_103830519	Not Available	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.76%
Loam	Environmental → Terrestrial → Soil → Loam	16.24%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	29.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.13%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_10507341	2228664022	Soil	MAAFIVVYDPSKGKEREMIEALHRWGATRIFRGAWVIEFDSTADLARRALVAVGGDITCAIVEIKPNGDHAEIGAEPDGRDALRRFGAPALAL
AF_2010_repII_A1DRAFT_100345571	3300000597	Forest Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLPLGALTSPAPASPSPC*
JGI1027J12803_1004166731	3300000955	Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGADHAVR
JGI12630J15595_100850432	3300001545	Forest Soil	MAAFLVVYNPSKGKESEMVAALHRWSGACIFRGAWVIEFDSTADLARRALIAAGGPETSCAIVEFKPNSDHAEVGVEPAGQDALQRVGGPTSRP*
JGI25614J43888_100375442	3300002906	Grasslands Soil	MATFLVVYDPSKAKEPATTDALHRWRGTRILRGAWVIEFDATADLARRTLVAVGGPKISCAIVEIKPNGDHAEVGVDPAGQDALQSVGGPAGQDALQRVGVRSARG*
JGI25615J43890_10273622	3300002910	Grasslands Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFCGAWVIEFDSNADLARRALVAVGGAISCAIVEIKPNADHAETGAEPAGRDALWRVGAAVLAS*
Ga0066395_102547702	3300004633	Tropical Forest Soil	MAAFLVVYDPSKGKEDEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPSGDHAEMGAEHAVRDVLLRLGALTSPAPASPLPC*
Ga0066690_104365361	3300005177	Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRIFRGAWVIEFDSTADLARRALVAVGGAISCAIVEIKLNGDHAEMGAEPAGRDALRRVGAFVT*
Ga0066688_106757661	3300005178	Soil	MAAFLVVYDPSKGKEREVIEALHRWGARRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGGLASAL*
Ga0066678_106559811	3300005181	Soil	MAAFLVVYDPSKGKEREMVEALHRWGARRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGALASAL*
Ga0066676_103673601	3300005186	Soil	MAAFLVVYDPSKGKEPEMVAALHRWGATCVFRGAWVIEFNSTADLARRALVAVGGAITCAIVEIKPNGDHAEMGAEHAGRDALQRLGAPTSGP*
Ga0066675_104702362	3300005187	Soil	MAAFLVVYDPSKGKEREMVEALHRWGARRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGGLASAL*
Ga0066388_1005628711	3300005332	Tropical Forest Soil	MASFLVVYDPAKGKEHEVVAALHQWGGTRLFRGAWVIEFDSTADLARRALIAVGGAIACAIVEIKPNGDHAELGVEHAGRDALQRLGAAVPES*
Ga0066388_1009829792	3300005332	Tropical Forest Soil	MAAFLVVYDPSKGKEREMIEALHRWGATRIFRGAWVIEFDSTADLARRALIAVGGDITCAIVEIKPNGDQAEMGANPVGRDALRRFGAPALAP*
Ga0066388_1018773072	3300005332	Tropical Forest Soil	MIRKRTKQMAAFLVVYDPSNGKEREMIEALHRWSATRIFRGAWVMEFDSTADLARRALVAVGGDITCAIVEIKPNGDHAELGAEPDGRDALRRFGAP*
Ga0066388_1067426232	3300005332	Tropical Forest Soil	MVAALHRWGATRIFRGAWVLEFDSTADLARRALTGIGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGALTSPAPASPSLY*
Ga0008090_101588122	3300005363	Tropical Rainforest Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGAPAPASPSPC*
Ga0066689_101063431	3300005447	Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFRGAWVIEFDSTADLARRALVAVGGAISCAIVEIKPNGDHAEMGAEPAGRDALRRVGAFVT*
Ga0070706_1001666231	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGAQTSPAPASPSPC*
Ga0070707_1020359311	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAAFLVVYDPSKGKEQEMVAALHRWGATCVFRGAWVIEFNSTADLARRALVAVGGAITCAIVEIKPNGDHAEMGAEHAGRDALQRLGAPTSGP*
Ga0070699_1005674363	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGNHAEMGAEHAVRDALLRLGAQTSP
Ga0066692_109348702	3300005555	Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRIFRGAWVIEYDSTADLARRALVAVGGAITCAIVEIKPNGDHAEMGAEPA
Ga0066707_110012601	3300005556	Soil	MAAFLVVYDPSKGKEREMVEALHRWGATRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGGLASAL*
Ga0066700_102451094	3300005559	Soil	MAAFLVVYDPSKGKEQEIVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGAPDVPAPASPSPC*
Ga0066700_111167701	3300005559	Soil	MATFLVVYDPSKAKEPATTDALHRWRGTRILRGAWVIEFDATADLARRTLVAVGGPKISCAIVEIKPNGDHAEMGAEPAGRDALRRLGASVSAP*
Ga0066708_107910942	3300005576	Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRIFRGAWVIEYDSTADLARRALVAVGGAITCAIVEIKPNGDHAEMGAEPAGRDA
Ga0066706_108111232	3300005598	Soil	MAAFLVVYDPSKGKEREVIEALHRWGARRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDA
Ga0066905_1002648285	3300005713	Tropical Forest Soil	MAAFLVVYDPSKGKEREMIEALHRWSATRIFRGAWVIEFDSTADLARRALVAVGGAITCAIVEIKPNGDHAEIGAEPAGEDALRCFGAPASAP*
Ga0066905_1006243091	3300005713	Tropical Forest Soil	ALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKRNGDHAEMGAEHAVRDALLRLGALTSPAPASPSPC*
Ga0066903_1033650741	3300005764	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGALTSPAPASSSPC*
Ga0066903_1087661611	3300005764	Tropical Forest Soil	LVVYDPAKGKEHEVVAALHRWGATRLFRGAWVIEFNSTADLARRALIAVGGAIACAIVEIKPNGDHAELGVEHAGRDALLRLSASVSGP*
Ga0066903_1090321161	3300005764	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMVAALQRLGATRIFRGAWVLKFDSTADLARRALAGIGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRPGALTSPAPASPSPC*
Ga0070717_102834203	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAAFLVIYDPSKGKEHEMVAALHRWSGARIFRGAWVIEFDSTADLARRALFAVGGDISCAVVEIKPNGDHAEIGAEPAGQDALRRLGGPASGP*
Ga0066658_100443793	3300006794	Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRLFRGAWVIEFDSTADLARRALVAVGGAISCAIVEIKPNGDHAEMGAEPAGRDALRRVGAFVT*
Ga0066659_109221141	3300006797	Soil	MAAFLVVYDPSKGKEREMVEALHRWSATRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGALASTL*
Ga0066660_104293443	3300006800	Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFRGAWVIEFDSTADLARRALVAVGGAISCAIVEIKPNGDHAEMGAEPAGRDALRRLGASVSAP*
Ga0066710_1011804951	3300009012	Grasslands Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATCVFRGAWVIEFNSTADLARRALVAVGGAITCAIVEIKPNGDHAEMGAEHAGRDALRRLGAQTSGP
Ga0066710_1013780412	3300009012	Grasslands Soil	MAAFLVVYDPSKGKEREMVEALHRWGARRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGALASAL
Ga0099827_119270721	3300009090	Vadose Zone Soil	YDPSKGKEHEVVAALHRWGATRLFCGAWVIEFDSNADLARRALVAVGGAISCAIVEIKPNADHAETGAEPAGRDALWRVGAAVLAS*
Ga0066709_1011277451	3300009137	Grasslands Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRIFRGAWVIEYDSTADLARRALVAVGGAITCAIVEIKPNGDHAEMGAEPAGRDALRRLGASVSAP*
Ga0126374_104103131	3300009792	Tropical Forest Soil	MVAALHRWGATRIFRGAWVLEFYSTADLARRALTGIGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGALTSPAPASPSPC*
Ga0126380_107036911	3300010043	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGIGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGALTSPAPASSSPC*
Ga0126380_111165761	3300010043	Tropical Forest Soil	MATFLVVYDPSKGKEQEMITARHRWGATRIFRGAWVLQFDSTADLARRALVGVGGIITCAIFLMIPNADPAEMGAEHAVRDALLRLSPAAA
Ga0126384_110788391	3300010046	Tropical Forest Soil	MIRKRTKQMAAFLVVYDPSKGKEHEMVTALHRWGATRIFRGTWVLESDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGADHAVRDALLRLGAQTSPAPASPSPC*
Ga0126384_111307531	3300010046	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMVSALHRWGATRIFRGAWVLEFDSTADLARRALAGIGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGPLTSPAPASPSLC*
Ga0126382_105847311	3300010047	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAQMGAEHAVRDALLRLGALTSSAPVGPSLC*
Ga0126373_104841992	3300010048	Tropical Forest Soil	MAAFLIVYDPSKGKEEEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPSGDHAEMGAEHAVRDVLLRLGALTSPAPASPLPC*
Ga0134062_106779981	3300010337	Grasslands Soil	MAAFLVVYDPSKGKEPEMVAALHRWGATCVFRGAWVIEFNSTADLARRALVAVGGAITCAIVEIKPDGDHAEMGAEHAGRDALRHVGAS
Ga0126370_103890363	3300010358	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPSGDHAEMGAEHAVRDALLRLGALTSPAPASPLPC*
Ga0126376_112500461	3300010359	Tropical Forest Soil	MAAFLIVYDPSKGKEEEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGALTSPAPASRSPC*
Ga0126377_121110402	3300010362	Tropical Forest Soil	MIRKRTKQMAAFLVVYDPSNGKEREMIEALHRWSATRIFRGAWVIEFDSTADLARRALIAVGGAITCAIAEIKPNGDHAEMGAEPAGRDALRRLGAPALA
Ga0126377_131812991	3300010362	Tropical Forest Soil	MATFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGVGGIITCAIVEIKPNGDHVEMGAEHAVRDELLRLGALTSPAPAARHLFSVAPMPAFSIASRPSKS
Ga0126379_118677431	3300010366	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGIGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGALTSPAPASPSLC*
Ga0126381_1024893112	3300010376	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADFARRALVGVGGIITCAIVEIKPNGDHVEMGAEHAVRDELLRLGALTSPAPASPSLC*
Ga0126383_109598162	3300010398	Tropical Forest Soil	MATFLVGYDPSKGKEHEMVTALHRWGATRIFRGTWVLESDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGADHAVRDALLRLGAQTSPAPASPPPC*
Ga0137393_103659181	3300011271	Vadose Zone Soil	MASFLVVYDPTKGKEHEVVAALHRWGATRLFCGAWVIEFDSNADLARRALVAVGGAISCAIVEIKPNADHAETGAEPAGRDALWRVGAAVLAS*
Ga0137383_111794171	3300012199	Vadose Zone Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRIFRGAWVIEFDSTADLARRALVAVGGAITCAIVEIKPNGDHAEMGAEPAGRDALRRVGAFVT*
Ga0137374_100683706	3300012204	Vadose Zone Soil	MATFLVVYDPSKGKEREIVAALHRWGATRIFRGAWVVEFNSTADLALRALVAVGGAISCAIVEMQTNGDHAEMGAEHAGRDALRRLGAQTSGP*
Ga0137374_106546691	3300012204	Vadose Zone Soil	MATFLVVYDPSKGKEREMVAALHRWGATRIFRGAWVIEFNSTADLALRALVAVGGAISCAIVEMQPNGDHAEMGAEHAGRDALRRLGAQTSEP*
Ga0137362_104095412	3300012205	Vadose Zone Soil	GLLMASFLVVYDPIKGKEHEVVAALHRWGATRLFRGAWVVEFDSTADLARRALIAVGGAIACAIVEIKPNGDHAELGAEHAGRDALRRLGASVAGP*
Ga0137381_102903932	3300012207	Vadose Zone Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRIFRGAWVIEFDSTADLARRALVAVGGAITCAIVEIKPNGDHAEMGAEPAGRDALRRLGASVSAP*
Ga0137379_106318661	3300012209	Vadose Zone Soil	SNYDDKHALQMAAFLVVYDPSKGKEREMVEALHRWGARRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGGLASAL*
Ga0137378_114987922	3300012210	Vadose Zone Soil	MAAFLVVYDPSKGKEREMVEALHRWGARRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGALASAS*
Ga0137377_113007731	3300012211	Vadose Zone Soil	VYDPSKGKEREIVAALHRWGATRIFRGAWVVEFNSTADLALRALVAVGGAISCAIVEMQTNGDHAEMGAEHAGRDALRRLGAQTSGP*
Ga0137372_106113632	3300012350	Vadose Zone Soil	MATFLVVYDPSKGKEREIVAALHRWGATRIFRGAWVVEFNSTADLALRALVAVGGAISCAIVEMQPNGDHAEMGAEHAGRDALRRLGAQTSGP*
Ga0137372_111014361	3300012350	Vadose Zone Soil	FLVVYEPSKGNEREMTAALHRWRGARIFRGAWVVEFDSTAELVRRALAKAGGANISCAIVEIRPKGDHAEMGADAAGRDALRRFGAPTSGP*
Ga0137371_102254362	3300012356	Vadose Zone Soil	MAAFLVVYEPSKGKEHEVVAALHRWGATRIFRGAWVIEFDSTADLARRALVAVGGAISCAIVEIKPNGDHAEMGAEPAGRDALRRLGASVSAP*
Ga0137384_103825692	3300012357	Vadose Zone Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRIFRGAWVIEFDSTADLARRALVAVGGAISCAIVEIKPNGDHAEMGAEPAGRDALRRLGASVSAP*
Ga0137368_101094982	3300012358	Vadose Zone Soil	MATFLVVYDPSKGKEREIVAALHRWGATRIFRGAWVIEFNSTADLALRALVAVGGAISCAIVEMQPNGDHAEMGAEHAGRDALRRLGAQTSGP*
Ga0137395_100475504	3300012917	Vadose Zone Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFCGAWVIEFDSNADLARRALVAVGGAISCAIVEIKPNGDHAEMGAEP
Ga0137359_101802623	3300012923	Vadose Zone Soil	MASFLVVYDPTKGKEHEVVAALNRWGATRLFRGAWVLEFDSTTDLARRALIAVGGAIACAIVEIKPNGDHAELGVEHAGRDALRRVAASVSGP*
Ga0126375_118000961	3300012948	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMITARHRWGATRIFRGAWVLQFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRL
Ga0126369_104549832	3300012971	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMVAALQRLGATRIFRGAWVLKFDSTADLARRALAGIGGIITCAIVEIKPNGGHAELGAEHAVRDALLRLGALTSPAPASPSLC*
Ga0134073_102334872	3300015356	Grasslands Soil	MAAFLVVYDPSKGKEHEVIAALHRWGATRIFRGAWVIEFDSTADLARRALVAVGGAISCTIVEIKPNGDHAEMGAEPAGRDALGRLGASVSAP*
Ga0182041_107740611	3300016294	Soil	KEPEMVAALHRWGATRIFRGAWVLEFDSTADRARQALVGVGGIITCAIVEIKPSGDHAEMGAEHAVRDALLRLGAPPASPLPC
Ga0182033_111567842	3300016319	Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEVDSTADVARRARVGVGGIITCAIVEIKPSGDHAEMGAEHAVRDVLLRLGALTSPAPASPLPC
Ga0182034_118520321	3300016371	Soil	MAAFLIVYDPSKGKEEEMVAALHRWGATRIFRGAWVPEFDSTADLARRALTGIGGIITCAIVEIKRNGDHAEMGAEHAVRDALLRLGALTSPAPASPSLC
Ga0182039_105598281	3300016422	Soil	MAAFLVVYDPSKGKEDEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGVGGIITCAIVEIKPSGDHAEMGAEHAVRDVLLR
Ga0066667_103480202	3300018433	Grasslands Soil	MAAFLVVYDPSKGKEREVIEALHRWGARRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGALASAL
Ga0066662_117279151	3300018468	Grasslands Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRIFRGAWVIEFDSTADLARRALVAVGGAISCAIVEIKPNGDHAEMGAEPAGRDALRRLGASVSAP
Ga0137408_14368412	3300019789	Vadose Zone Soil	MATFLVVYDPSKAKEPATTDALHRWRGTRILRGAWVIEFDATADLARRTLVAVGGPKISCAIVEIKPNGDHAEVGVDPAGQDALQSVGGPAGQDALQRVGVRSARG
Ga0126371_108068181	3300021560	Tropical Forest Soil	MAAFLIVYDPSKGKEEEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGAGGIITCAIVEIKPSGDHAEMGAEHAVRDVLLRLGALTSPAPASPLPC
Ga0126371_126960363	3300021560	Tropical Forest Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALTGIGGIITCAIVEIKPNGDHAEMGAEH
Ga0179589_101710241	3300024288	Vadose Zone Soil	DALHRWGGTRILRGAWVIEFDATADLARRTLVAVGGPKISCAIVEIKPNGDHAEVGVDPAGQDALQSVGGPAGQDALQRVGVRSARG
Ga0207684_101158444	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAAFLVVYDPSKGKEQEMVAALHRWGATCVFRGAWVIEFNSTADLARRALVAVGGAITCAIVEIKPNGDHAEMGAEHAGRDALQRLGAPTSGP
Ga0207684_101238546	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGAQTSPAPASPSPC
Ga0209240_10054214	3300026304	Grasslands Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFCGAWVIEFDSNADLARRALVAVGGAISCAIVEIKPNADHAETGAEPAGRDALWRVGAAVLAS
Ga0209240_11144111	3300026304	Grasslands Soil	FLVVYDPSKAKEPATTDALHRWRGTRILRGAWVIEFDATADLARRTLVAVGGPKISCAIVEIKPNGDHAEVGVDPAGQDALQSVGGPAGQDALQRVGVRSARG
Ga0209647_10915621	3300026319	Grasslands Soil	MAAFLVIYDPSKGKEHEMVAALHRWSGARIFRGAWVIEFDSTADLARRALFAVGGDISCAVVEIKPNGDHAEIGAEPAGQDALRRLGGPASGP
Ga0209152_100480563	3300026325	Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFRGAWVIEFDSTADLARRALVAVGGAISCAIVEIKPNGDHAEMGAEPAGRDALRRVGAFVT
Ga0257178_10611731	3300026446	Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFCGAWVIEFDSNADLARRALVAVGGAISCAIVEIKPNADHAETGAEPTGRDALWRVGAAVLAS
Ga0209156_102703201	3300026547	Soil	MAAFLVVYDPSKGKEREMVEALHRWGARRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGGLASAL
Ga0209474_103846532	3300026550	Soil	DKHALQMAAFLVVYDPSKGKEREMVEALHRWGARRIFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGGLASAL
Ga0209648_100070605	3300026551	Grasslands Soil	MATFLVVYDPSKAKEPATTDALHRWRGTRILRGAWVIEFDATADLARRTLVAVGGPKISCAIVEIKPNGDHAEVGVDPAGQDALQSVGGPAGQDALQRVGVRSARGGRNPRASSAAIRFCECSRTKARRSM
Ga0209577_103594661	3300026552	Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFRGAWVIEFDSTADLARRALVAVGGAISCAIVEIKPNGDHAEMGAEPAGRDALRRVGAFV
Ga0209689_11065961	3300027748	Soil	MAAFLVVYDPSKGKEQEIVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGAPDVPAPASPSPC
Ga0209689_11709081	3300027748	Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFRGAWVIEFDSTADLARRALIAVGGAITCAVVEIKPNGDHAELGAEPAGRDALRRLGGLASAL
Ga0209465_102355851	3300027874	Tropical Forest Soil	MAAFLVVYDPSKGKEDEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGVGGIITCAIVEIKPNGDHAEMGAEHAFRDALLRLGALTSPAPASPSPC
Ga0209526_100128206	3300028047	Forest Soil	MAAFLVVYNPSKGKESEMVAALHRWSGACIFRGAWVIEFDSTADLARRALIAAGGPETSCAIVEFKPNSDHAEVGVEPAGQDALQRVGGPTSRP
Ga0137415_104415341	3300028536	Vadose Zone Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFCGGWVIEFDSNADLARRALVAVGGAISCAIVEIKPNADHAETGAEPAGRDALWRVGAAVLAS
Ga0307278_104347901	3300028878	Soil	MAAFLVVYDPSKGKEHEVVAALHRWGATRLFRGAWVIEFDSNADLARRALVAVGGAISCAIVEIKPNGDHAEMGAEPAGRDVLRRVGALVLAS
Ga0318516_100045682	3300031543	Soil	MAAFLVVYDPSKGKEQEMVGALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGALTSPAPASPSPC
Ga0318538_101960221	3300031546	Soil	VYDPSKGKEQEMVGALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGALTSPAPASPSPC
Ga0310915_105121521	3300031573	Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVPEFDSTADLARRALTGIGGIITCAIVEIKRNGDHAEMGAEHAV
Ga0318542_102569351	3300031668	Soil	LVVYDPSKGKEQEMVGALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLRLGALTSPAPASPSPC
Ga0306925_103711961	3300031890	Soil	MAAFLVVYDPSKGKEDEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGVGGIITCAIVEIKPSGDHAEMGAEHAVRDALLRLGALTSPAPASPLPC
Ga0306923_119066492	3300031910	Soil	MAAFLIVYDPSKGKEEEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPSGDHAEMGAEHAVRDVLLRLGALTSPAPASPLPC
Ga0306921_101680905	3300031912	Soil	MAAFLIVYDPSKGKEEEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPSGDHAEMGAEHAVRDVLLRLGALTSPAPAS
Ga0306922_101967303	3300032001	Soil	MAAFLVVYDPSKGKEDEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPSGDHAEMGAEHAVRDALLRLGALTSPAPASPLPC
Ga0306922_109994311	3300032001	Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVPEFDSTADLARRALTGIGGIITCAIVEIKRNGDHAEMGAEHAVRDALLRLGAL
Ga0318562_102060212	3300032008	Soil	MAAFLVVYDPSKGKEQEMVGALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLR
Ga0318559_100499801	3300032039	Soil	MAAFLVVYDPSKGKEQEMVGALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHA
Ga0318504_102644711	3300032063	Soil	MAAFLVVYDPSKGKEDEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGVGGIITCAIVEIKPSGDHAEMGAEHAVRDALLRLGALT
Ga0306924_102460941	3300032076	Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGVGGIITCAIVEIKPSGDHAEMGAEHAVRDALLRLGALTSPAPASPLPC
Ga0306924_111669942	3300032076	Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALAGVGGIITCAIVEIKPNGDHAEMGAEHAVRDALLPPGALTSPAPASPSPC
Ga0306920_1016040691	3300032261	Soil	MAAFLVVYDPSKGKEQEMVAALHRWGATRIFRGAWVLEFDSTADLARRALVGVGGIITCAIVEIKPNGDHAEMGAEHAVRDAL
Ga0306920_1038305191	3300032261	Soil	PSKGKEQEMVAALHRWGATRIFRGAWVPEFDSTADLARRALTGIGGIITCAIVEIKRNGDHAEMGAEHAVRDALLRLGALTSPAPASPSLC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077118

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences