Metagenome / Metatranscriptome Family F077130

Basic Information
Family ID	F077130
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	55 residues
Representative Sequence	DPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEASANKVIRSNK
Number of Associated Samples	82
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.74 %
% of genes near scaffold ends (potentially truncated)	91.45 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (83.761 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.496 % of family members)
Environment Ontology (ENVO)	Unclassified (48.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.812 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.38% β-sheet: 0.00% Coil/Unstructured: 59.62%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF03401	TctC	1.71
PF03720	UDPG_MGDP_dh_C	1.71
PF00872	Transposase_mut	1.71
PF13683	rve_3	1.71
PF08238	Sel1	0.85
PF13727	CoA_binding_3	0.85
PF00027	cNMP_binding	0.85
PF00239	Resolvase	0.85
PF03721	UDPG_MGDP_dh_N	0.85
PF00196	GerE	0.85
PF00498	FHA	0.85
PF06147	DUF968	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.71
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.71
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.85
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.85
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.85
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.85
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.76 %
All Organisms	root	All Organisms	16.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.76 %
cellular organisms	root	All Organisms → cellular organisms	16.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.76 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.42 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.71 %
Denitrobaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Denitrobaculum	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.71 %
Denitrobaculum tricleocarpae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Denitrobaculum → Denitrobaculum tricleocarpae	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02RWIDJ	Not Available	507	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig575167	Not Available	683	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1065146	Not Available	555	Open in IMG/M
3300000955\|JGI1027J12803_103851404	Not Available	523	Open in IMG/M
3300000955\|JGI1027J12803_108026845	Not Available	734	Open in IMG/M
3300000956\|JGI10216J12902_123866970	Not Available	532	Open in IMG/M
3300001081\|JGI12662J13196_1016112	Not Available	617	Open in IMG/M
3300001593\|JGI12635J15846_10442719	Not Available	776	Open in IMG/M
3300004152\|Ga0062386_101799978	Not Available	511	Open in IMG/M
3300005167\|Ga0066672_10528318	Not Available	765	Open in IMG/M
3300005178\|Ga0066688_10579011	Not Available	721	Open in IMG/M
3300005332\|Ga0066388_101205933	Not Available	1294	Open in IMG/M
3300005332\|Ga0066388_104304676	Not Available	725	Open in IMG/M
3300005332\|Ga0066388_105123500	Not Available	665	Open in IMG/M
3300005332\|Ga0066388_107787849	Not Available	536	Open in IMG/M
3300005363\|Ga0008090_15506311	Not Available	880	Open in IMG/M
3300005440\|Ga0070705_101895239	Not Available	507	Open in IMG/M
3300005764\|Ga0066903_101035268	Not Available	1505	Open in IMG/M
3300005764\|Ga0066903_102744657	Not Available	955	Open in IMG/M
3300005764\|Ga0066903_103475225	Not Available	849	Open in IMG/M
3300005764\|Ga0066903_104121112	Not Available	778	Open in IMG/M
3300005764\|Ga0066903_104524732	Not Available	741	Open in IMG/M
3300005764\|Ga0066903_106157615	Not Available	627	Open in IMG/M
3300005764\|Ga0066903_106611911	Not Available	603	Open in IMG/M
3300005921\|Ga0070766_10762340	Not Available	658	Open in IMG/M
3300006028\|Ga0070717_10044306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3632	Open in IMG/M
3300006791\|Ga0066653_10352000	Not Available	747	Open in IMG/M
3300006796\|Ga0066665_11191564	Not Available	581	Open in IMG/M
3300006846\|Ga0075430_100929704	Not Available	716	Open in IMG/M
3300006953\|Ga0074063_12833264	Not Available	544	Open in IMG/M
3300009162\|Ga0075423_10534539	Not Available	1234	Open in IMG/M
3300009162\|Ga0075423_11894962	Not Available	644	Open in IMG/M
3300009162\|Ga0075423_12897285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300010043\|Ga0126380_11652208	Not Available	574	Open in IMG/M
3300010358\|Ga0126370_10189637	Not Available	1542	Open in IMG/M
3300010361\|Ga0126378_10635850	Not Available	1181	Open in IMG/M
3300010361\|Ga0126378_10641798	Not Available	1175	Open in IMG/M
3300010366\|Ga0126379_12100702	Not Available	667	Open in IMG/M
3300010376\|Ga0126381_103547928	Not Available	612	Open in IMG/M
3300010376\|Ga0126381_104293207	Not Available	552	Open in IMG/M
3300010398\|Ga0126383_11989923	Not Available	669	Open in IMG/M
3300012198\|Ga0137364_10258956	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300012209\|Ga0137379_10022128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6106	Open in IMG/M
3300012350\|Ga0137372_11085975	Not Available	550	Open in IMG/M
3300012355\|Ga0137369_10421794	Not Available	958	Open in IMG/M
3300012362\|Ga0137361_11642698	Not Available	563	Open in IMG/M
3300012971\|Ga0126369_10128398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2348	Open in IMG/M
3300012971\|Ga0126369_12298644	Not Available	626	Open in IMG/M
3300012971\|Ga0126369_12968337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300016270\|Ga0182036_11593393	Not Available	550	Open in IMG/M
3300016294\|Ga0182041_10308979	Not Available	1314	Open in IMG/M
3300016294\|Ga0182041_10503561	Not Available	1050	Open in IMG/M
3300016294\|Ga0182041_11497896	Not Available	621	Open in IMG/M
3300016319\|Ga0182033_10593206	Not Available	962	Open in IMG/M
3300016319\|Ga0182033_10774989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	844	Open in IMG/M
3300016319\|Ga0182033_11528437	Not Available	603	Open in IMG/M
3300016319\|Ga0182033_11578417	Not Available	593	Open in IMG/M
3300016319\|Ga0182033_12067347	Not Available	519	Open in IMG/M
3300016341\|Ga0182035_10328339	Not Available	1264	Open in IMG/M
3300016371\|Ga0182034_10129474	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300016387\|Ga0182040_10273237	Not Available	1280	Open in IMG/M
3300016387\|Ga0182040_10494102	Not Available	977	Open in IMG/M
3300016404\|Ga0182037_12037259	Not Available	515	Open in IMG/M
3300016422\|Ga0182039_10338896	Not Available	1259	Open in IMG/M
3300016422\|Ga0182039_10575461	Not Available	982	Open in IMG/M
3300016422\|Ga0182039_10618925	Not Available	948	Open in IMG/M
3300018433\|Ga0066667_11198275	Not Available	660	Open in IMG/M
3300020579\|Ga0210407_11101585	Not Available	602	Open in IMG/M
3300020580\|Ga0210403_11516261	Not Available	504	Open in IMG/M
3300021178\|Ga0210408_11512074	Not Available	502	Open in IMG/M
3300021358\|Ga0213873_10130063	Not Available	745	Open in IMG/M
3300021560\|Ga0126371_10806146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1085	Open in IMG/M
3300025916\|Ga0207663_10058489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2433	Open in IMG/M
3300027654\|Ga0209799_1135305	Not Available	561	Open in IMG/M
3300027909\|Ga0209382_10393861	All Organisms → cellular organisms → Bacteria → Proteobacteria	1544	Open in IMG/M
3300028878\|Ga0307278_10163006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Denitrobaculum → Denitrobaculum tricleocarpae	997	Open in IMG/M
3300031544\|Ga0318534_10521240	Not Available	678	Open in IMG/M
3300031545\|Ga0318541_10146632	Not Available	1293	Open in IMG/M
3300031545\|Ga0318541_10749217	Not Available	545	Open in IMG/M
3300031561\|Ga0318528_10406693	Not Available	731	Open in IMG/M
3300031564\|Ga0318573_10662461	Not Available	561	Open in IMG/M
3300031680\|Ga0318574_10667342	Not Available	609	Open in IMG/M
3300031680\|Ga0318574_10943631	Not Available	505	Open in IMG/M
3300031719\|Ga0306917_10247727	Not Available	1364	Open in IMG/M
3300031736\|Ga0318501_10594300	Not Available	607	Open in IMG/M
3300031781\|Ga0318547_10296101	Not Available	982	Open in IMG/M
3300031805\|Ga0318497_10152280	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300031821\|Ga0318567_10208959	Not Available	1091	Open in IMG/M
3300031833\|Ga0310917_10056610	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300031845\|Ga0318511_10200638	Not Available	886	Open in IMG/M
3300031879\|Ga0306919_10016710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4328	Open in IMG/M
3300031879\|Ga0306919_10543289	Not Available	896	Open in IMG/M
3300031890\|Ga0306925_10102268	Not Available	3050	Open in IMG/M
3300031897\|Ga0318520_10098383	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300031910\|Ga0306923_10832513	Not Available	1016	Open in IMG/M
3300031910\|Ga0306923_11973058	Not Available	593	Open in IMG/M
3300031912\|Ga0306921_10097970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3395	Open in IMG/M
3300031912\|Ga0306921_11510527	Not Available	734	Open in IMG/M
3300031912\|Ga0306921_11831277	Not Available	652	Open in IMG/M
3300031941\|Ga0310912_10894868	Not Available	683	Open in IMG/M
3300031942\|Ga0310916_10413057	Not Available	1149	Open in IMG/M
3300031945\|Ga0310913_10285259	Not Available	1163	Open in IMG/M
3300031945\|Ga0310913_10772792	Not Available	678	Open in IMG/M
3300031946\|Ga0310910_10527181	Not Available	937	Open in IMG/M
3300031954\|Ga0306926_10619095	Not Available	1320	Open in IMG/M
3300031981\|Ga0318531_10001431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7527	Open in IMG/M
3300032001\|Ga0306922_11992923	Not Available	566	Open in IMG/M
3300032010\|Ga0318569_10015514	Not Available	2974	Open in IMG/M
3300032044\|Ga0318558_10122320	Not Available	1235	Open in IMG/M
3300032052\|Ga0318506_10416052	Not Available	596	Open in IMG/M
3300032076\|Ga0306924_10840321	Not Available	1020	Open in IMG/M
3300032261\|Ga0306920_100189472	All Organisms → cellular organisms → Bacteria	3069	Open in IMG/M
3300032261\|Ga0306920_103570623	Not Available	573	Open in IMG/M
3300033289\|Ga0310914_10408330	Not Available	1229	Open in IMG/M
3300033289\|Ga0310914_10903573	Not Available	782	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.87%
Host-Associated	Host-Associated	5.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.02%
Plants	Host-Associated → Plants	5.13%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.13%
Freshwater	Environmental → Aquatic → Freshwater	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.63%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.56%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001081	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_03938210	2070309004	Green-Waste Compost	VGKLFDGGFRAGTVSLAMLAVFLEAKIALTLVQPEALANKVIRSNK
KansclcFeb2_01044890	2124908045	Soil	KWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANKVIRSNK
AF_2010_repII_A01DRAFT_10651462	3300000580	Forest Soil	LLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPETSANKVIRSNK*
JGI1027J12803_1038514041	3300000955	Soil	PKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEASANKVIRSNK*
JGI1027J12803_1080268451	3300000955	Soil	YGPSPEHLRLLQDPKWGRLFDSGFHCERGGTVPLAMLTVFLEAKIALMCAEPAASADKAIRLNK*
JGI10216J12902_1238669701	3300000956	Soil	HLRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPAALRIT*
JGI12662J13196_10161122	3300001081	Forest Soil	WGKLFDNGFHCDRGGTVPLAMLAVFLEARIAVELCEQRAPSGNKVVRLNR*
JGI12635J15846_104427191	3300001593	Forest Soil	RPEHLQLLQDPKWGTLFDNAFHCDRGGTVPLAMLAVFLEARIAVELCEQRATSENKVIRLNK*
Ga0062386_1017999781	3300004152	Bog Forest Soil	QLLQDPKWGTLFDNGFHCDRGGTVPLAMLAVFLEARIAVELCEQRATSENKVIRLNK*
Ga0066672_105283182	3300005167	Soil	HDPKWGKLFDSGFHCDRAGTVPLAMLAVLLEAKIALTLVQPEALANKVIRSNK*
Ga0066688_105790111	3300005178	Soil	MGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLLKPEALANKVIRSNK*
Ga0066388_1012059333	3300005332	Tropical Forest Soil	KWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANNVIRSNK*
Ga0066388_1043046761	3300005332	Tropical Forest Soil	HLRLLRDRKWGRLFDDGFHCERGSTVPLAMLTVFLEAKIALMCAEPAASADKAVRLNK*
Ga0066388_1051235002	3300005332	Tropical Forest Soil	WGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALASKVIRSNK*
Ga0066388_1077878491	3300005332	Tropical Forest Soil	PRPEHLRLLHDRKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPETLANNVIRSNK*
Ga0008090_155063111	3300005363	Tropical Rainforest Soil	PKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPETSANKVIRSNK*
Ga0070705_1018952391	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RPEHLRLLHDPKWGKLFDSGFHSDRAGSVPLAMLAVFLEAKIALTLVQPEALANKVIRSNK*
Ga0066903_1010352683	3300005764	Tropical Forest Soil	FDSGFHCDRAGTVALAMLAVFLEAKIALTFVQPEASANKVIRSNK*
Ga0066903_1027446571	3300005764	Tropical Forest Soil	DPKWGKLFDGGFHCDRAGTVSLAMLAVFLEAKIALTLVQPEASANKVIRSNK*
Ga0066903_1034752252	3300005764	Tropical Forest Soil	LHHPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANKVIRSNK*
Ga0066903_1041211122	3300005764	Tropical Forest Soil	KWGKLFDSGFHCDRAGTVALAMLAVFLEAKIALTFVQPEAPANKVIRLNK*
Ga0066903_1045247321	3300005764	Tropical Forest Soil	EHLRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVRPEALANKVIRSNK*
Ga0066903_1061576151	3300005764	Tropical Forest Soil	KWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANKVIRSNK*
Ga0066903_1066119111	3300005764	Tropical Forest Soil	KWGKLFDGGFHCDRAGTVSLAMLAVFLEAKIALTLVQPEASANKVIRSNK*
Ga0070766_107623402	3300005921	Soil	LQLLQGPKWGTLFDNGFHCDRGGTVPLAMLAVFLEARIAVELCEQRATSENKVIRLNK*
Ga0070717_100443061	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GPRPEHLRLLHDPKWGKLFDSGFHCDRAGTVALAMLAVFLEAKIALTFVQPEALANKVIRSNK*
Ga0066653_103520002	3300006791	Soil	MGKLFDSGFHCDRAGTVPLAMLAVLLEAKIALTLVQPEALANKVIRSNK*
Ga0066665_111915641	3300006796	Soil	QDPKWGKLFDSGFHCERGGTVPLAMLAVFLEAKIALMCVQPAASADKAIRLSK*
Ga0075430_1009297041	3300006846	Populus Rhizosphere	IGPDRPRPEHLRLLQDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEASANKVIRSNK*
Ga0074063_128332641	3300006953	Soil	LLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEASANKVIRSNK*
Ga0075423_105345393	3300009162	Populus Rhizosphere	PKWGELFDSGFHSDRAGSVPLAMLAVFLEAKIALTLVQPEALANKVIRSNK*
Ga0075423_118949622	3300009162	Populus Rhizosphere	WGKLFDSGFHCDRAGTVPLAMLAVLLEAKIALTLVQPEALANKVIRSNK*
Ga0075423_128972851	3300009162	Populus Rhizosphere	SRRDLRLLQDPKWGTLFDSGFHCDRGGTVPLALLAVFLEAKIALRFVSAARTGNKVLRLRK*
Ga0126380_116522082	3300010043	Tropical Forest Soil	HRLLHDSKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLIQPEALANKVIRSNK*
Ga0126370_101896371	3300010358	Tropical Forest Soil	PKWGKLFDSGFHCDRAGTVPLAMLAVFLEATIALTLVQPEALANKVIRSNK*
Ga0126378_106358501	3300010361	Tropical Forest Soil	RPEHLRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANNVIRSNK*
Ga0126378_106417983	3300010361	Tropical Forest Soil	DPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALASKVIRSNK*
Ga0126378_128362011	3300010361	Tropical Forest Soil	LQDPKWGKLFNRGFHCNRRDGTVPLAMLAVFLEAKIALTLVQPAASANKAIRSNN*
Ga0126379_121007021	3300010366	Tropical Forest Soil	GFHCERGSTVPLAMLTVLLEAKIALMCAEPAASADKAVRLNK*
Ga0126381_1035479281	3300010376	Tropical Forest Soil	PRPEHLRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALASKVIRSNK*
Ga0126381_1042932072	3300010376	Tropical Forest Soil	WGRLFDGGFHCERGSTVPLAMLTVLLEAKIALMCAEPAASADKAVRLNK*
Ga0126383_119899232	3300010398	Tropical Forest Soil	HLRLLRDRKWGRLFDGGFHCERGSTVPLAMLTVLLEAKIALMCAEPAASADKAVRLNK*
Ga0137364_102589563	3300012198	Vadose Zone Soil	HDPKLGKLFVSGFHCDRAVTVPLALLAVFLEAKIALTLVQSEPLANKVIRSDR*
Ga0137379_100221281	3300012209	Vadose Zone Soil	HLRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLIQPEALANKVIRSNK*
Ga0137372_110859751	3300012350	Vadose Zone Soil	RPEHLRLLQDPKWGKLFDSGFHCDHGGTVPLAMLTVLLEAKIALTFVQPEASAEQVTRLNK*
Ga0137369_104217943	3300012355	Vadose Zone Soil	DPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANKVIRSNK*
Ga0137361_116426982	3300012362	Vadose Zone Soil	KLFDGGFHCDRGGTVPLAMLAVFLEAKIALMCVQPAASADKAIRLRK*
Ga0126369_101283985	3300012971	Tropical Forest Soil	EHLRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALASKVIRSNK*
Ga0126369_122986441	3300012971	Tropical Forest Soil	PEHLRLLHDPKWGKLFDSGFHCGRAGTVPLAMLAVFLEAKIALTLVQPEALENKVIRSNK
Ga0126369_129683371	3300012971	Tropical Forest Soil	KWGRLFDSGFHCDRGGTVPLAMLTVFLEAKIALTCVQPKASANKVIRLNK*
Ga0182036_115933932	3300016270	Soil	KLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLIQPEALANKVIRSNK
Ga0182041_103089791	3300016294	Soil	GPRPEHLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0182041_105035611	3300016294	Soil	HCDRAGTVPLAMLAVFLEAEIALTLVQPEASANKVIRSNK
Ga0182041_114978962	3300016294	Soil	LRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLIQPEALANKVIRSNK
Ga0182033_105932062	3300016319	Soil	FGPRPEHLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANNVIRSNK
Ga0182033_107749892	3300016319	Soil	GPDFGLRPAHLRLLHDPKWVKLFVSVLHCDRAGTIPLAMLAVFLEAKIALTLVQPEALANNVIRSNK
Ga0182033_115284372	3300016319	Soil	LQDPKWGKLFDSGFHCDRGGTIPLAMLAVFLEAKIALTFVQPEASANKVIRLNK
Ga0182033_115784172	3300016319	Soil	DPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPETSANKVIRSNK
Ga0182033_120673472	3300016319	Soil	DPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEASANKVIRSNK
Ga0182035_103283393	3300016341	Soil	LLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVILSNK
Ga0182034_101294744	3300016371	Soil	LRLLLDPKWGRLFDSGFHCERGGTVPLAMLTVFLEAKIALMCAEPAASADKAIRLNK
Ga0182040_102732372	3300016387	Soil	KWGRLFDSGFHCERGGTVPLAMLTVFLQAKIALMCAEPAASADKAIRLNK
Ga0182040_104941021	3300016387	Soil	LLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEASANKVIRSNK
Ga0182037_120372591	3300016404	Soil	LLRDPKWGRLFDSGFHCERGGTVPLAMLTVLLEAKIALMCAEPAASADKAIRLNK
Ga0182039_103388962	3300016422	Soil	YGPSPEHLRLLRDPKWGRLFDSGFHCERGGTVPLAMLTVFLQAKIALMCAEPAASADKAIRLNK
Ga0182039_105754612	3300016422	Soil	FDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPETSANKVIRSNK
Ga0182039_106189252	3300016422	Soil	WGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0066667_111982751	3300018433	Grasslands Soil	QDPKWGKLFDSGFHCERGGTVPLAMLAVFLEAKIALMCVQPAASADKAIRLSK
Ga0210407_111015852	3300020579	Soil	KLFDSGFHCDRAGTVALAMLAVFLEAKIALTLVQPEASANKVVRSNK
Ga0210403_115162611	3300020580	Soil	ELRLLQDPKWGTLFDGGFHCDRGGTVPLAMLAVFLEAKIALTLVQPEASANKVIGSNK
Ga0210408_115120742	3300021178	Soil	HLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALMLVQPEASANKVIRSNK
Ga0213873_101300631	3300021358	Rhizosphere	GKVFNRGFHCDRGGGTIPLAMLSVFLQAKIALILVQPEASAIKLAHS
Ga0126371_108061463	3300021560	Tropical Forest Soil	YIPGSSQIRVNLPGTRAASEYGPSPEHLRLLRDRKWGRLFDGGFHCERGSTVPLAMLTVLLEAKIALMCAEPAASADKAVRLNK
Ga0207663_100584891	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	HDPKWGKLFDSGFHSDRAGSVPLAMLAVFLEAKIALTLVQPEALANKVIRSNK
Ga0209799_11353052	3300027654	Tropical Forest Soil	LRLLQDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAEIALTLVQPEASANKVIRSNK
Ga0209382_103938612	3300027909	Populus Rhizosphere	ARPEDLRLLEHPKWGTLFDSGFHCDRGGTVPLAMLAVFLEAKIALTCVQPAASANNRLNRRP
Ga0307278_101630061	3300028878	Soil	LRLLQDPKWGKLFDSGFHCERGGTVPLAMLAVFLEAKIALMCVQPAASADKAIRLSK
Ga0318534_105212402	3300031544	Soil	GPRPEHLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEASANKVIRSNK
Ga0318541_101466323	3300031545	Soil	HDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0318541_107492171	3300031545	Soil	GKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPETSANKVIRSNK
Ga0318528_104066931	3300031561	Soil	RPEHLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANKVIRSN
Ga0318573_106624611	3300031564	Soil	VGKLFDGGFRAGTVSLAMLAVFLEAKIALTLVQPEALANEALANNAIRSNK
Ga0310915_100913934	3300031573	Soil	CDRAATVALAMLAVFLEAKIALTFVQPEASANKVIRSNK
Ga0318574_106673421	3300031680	Soil	WGKLFDGGFHCDRAATVALAMLAVFLEAKIALTFVQPEASANKVIRSNK
Ga0318574_109436311	3300031680	Soil	EHLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0306917_102477271	3300031719	Soil	LRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0318501_105943002	3300031736	Soil	DPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANNVIRSNK
Ga0318547_102961013	3300031781	Soil	DPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0318497_101522801	3300031805	Soil	PKWGKLFDGGFHCDRAATVALAMLAVFLEAKIALTFVQPEASANKVIRSNK
Ga0318567_102089591	3300031821	Soil	EHLRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0310917_100566107	3300031833	Soil	RPEHLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSN
Ga0318511_102006381	3300031845	Soil	GPRPEHLRLLQDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0306919_100167106	3300031879	Soil	EHLRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANKVIRSNK
Ga0306919_105432892	3300031879	Soil	AGTSPDFGPRPEHLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0306925_101022681	3300031890	Soil	GPDFAPRPEHLRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEALANKVIRSNK
Ga0318520_100983833	3300031897	Soil	EHLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEASANKVIRSNK
Ga0306923_108325131	3300031910	Soil	GRLFDSGFHCERGGTVPLAMLTVFLQAKIALMCAEPAASADKAIRLNK
Ga0306923_119730582	3300031910	Soil	EHLRLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVRPEALANKVIRSNK
Ga0306921_100979708	3300031912	Soil	FGPRPEHLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0306921_115105271	3300031912	Soil	WWNCGYGAVRNGASLYIPGSSQIRVNLPGTKAAPEYGPSPEHLRLLQDPKWGRLFDSGFHCERGSTVPLAMLTVFLEAKIALMCAEPAASADKAIRLNK
Ga0306921_118312772	3300031912	Soil	FHCERGGTVPLAMLTVFLEAKIALMCAEPAASADKAMRLNK
Ga0310912_108948682	3300031941	Soil	LFDGGFHCDRAGTVSLAMLAVFLEAKIALTLVQPEASANKVIRSNK
Ga0310916_104130572	3300031942	Soil	RDPKWGRLFDSGFHCERGSTVPLAMLTVFLEAKIALMCAEPAASADKAIRLNK
Ga0310913_102852591	3300031945	Soil	KWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPETSANKVIRSNK
Ga0310913_107727921	3300031945	Soil	GTNAAPGYGPSPEHLRLLRDPKWGRLFDSGFHCERGGTVPLAMLTVFLQAKIALMCAEPAASADKAIRLNK
Ga0310910_105271811	3300031946	Soil	HDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPETSANKVIRSNK
Ga0306926_106190952	3300031954	Soil	LPGTNAAPGYGPSPEHLRLLRDPKWGRLFDSGFHCERGGTVPLAMLTVFLQAKIALMCAEPAASADKAIRLNK
Ga0318531_100014311	3300031981	Soil	PEHLRLLQDPKWGKLFDGGFHCDRAGTVPLAMLAVFLEAEIALTLVQPEASANKVIRSNK
Ga0306922_119929232	3300032001	Soil	DPKWGRLFDSGFHCERGSTVPLAMLTVFLEAKIALMCAEPAASADKAIHLNK
Ga0318569_100155145	3300032010	Soil	VGKLFDGGFRAGTVPLAMLAVFLEAEIALTLVQPEASANKVIRSNK
Ga0318558_101223201	3300032044	Soil	LHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKVALTLVRPEALANNVIRSNK
Ga0318506_104160522	3300032052	Soil	SGPRPEHLQLLHDPKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPEASANKVIRSNK
Ga0306924_108403211	3300032076	Soil	LFDSGFHCERGGTVPLAMLTVFLQAKIALMCAEPAASADKAIRLNK
Ga0306920_1001894721	3300032261	Soil	PGTNAAPGYGPSPEHLRLLRDPKWGRLFDSGFHCERGGTVPLAMLTVFLQAKIALMCAEPAASADKAIRLNK
Ga0306920_1035706231	3300032261	Soil	HDPKCGKLFDSCFHCDRAGTVPLAMLAVFLEAKIALTLVQPEASANKVIRSNK
Ga0310914_104083302	3300033289	Soil	LRLLRDPKWGRLFDSGFHCERGGTVPLAMLTVFLQAKIALMCAEPAASADKAIRLNK
Ga0310914_109035732	3300033289	Soil	PKWGKLFDSGFHCDRAGTVPLAMLAVFLEAKIALTLVQPETSANKVIRSNK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077130

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign