Metagenome / Metatranscriptome Family F077290

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077290
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	94 residues
Representative Sequence	MQCPKCSHSRHVVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNN
Number of Associated Samples	78
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.38 %
% of genes near scaffold ends (potentially truncated)	30.77 %
% of genes from short scaffolds (< 2000 bps)	82.91 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (81.197 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (29.060 % of family members)
Environment Ontology (ENVO)	Unclassified (42.735 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (47.009 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 39.13% Coil/Unstructured: 60.87%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF12728	HTH_17	11.11
PF12684	DUF3799	4.27
PF03330	DPBB_1	3.42
PF04851	ResIII	2.56
PF11753	DUF3310	0.85
PF09250	Prim-Pol	0.85
PF00692	dUTPase	0.85
PF14279	HNH_5	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.85
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.20 %
All Organisms	root	All Organisms	18.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.20 %
cellular organisms	root	All Organisms → cellular organisms	11.97 %
Viruses	superkingdom	All Organisms → Viruses	6.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.20 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.97 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.20 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.20 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.13 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.20 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.13 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.20 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.85 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.20 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.85 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.20 %
unclassified Siphoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.85 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.20 %
Synechococcus phage S-CBS3	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.85 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005990\|Ga0073921_1098836	Not Available	556	Open in IMG/M
3300006484\|Ga0070744_10060370	All Organisms → Viruses → Predicted Viral	1106	Open in IMG/M
3300006484\|Ga0070744_10112033	Not Available	787	Open in IMG/M
3300007555\|Ga0102817_1060585	Not Available	826	Open in IMG/M
3300007708\|Ga0102859_1155728	Not Available	672	Open in IMG/M
3300007972\|Ga0105745_1086895	Not Available	906	Open in IMG/M
3300007973\|Ga0105746_1220803	Not Available	650	Open in IMG/M
3300008996\|Ga0102831_1276191	Not Available	555	Open in IMG/M
3300009026\|Ga0102829_1022419	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	1811	Open in IMG/M
3300009039\|Ga0105152_10063459	Not Available	1486	Open in IMG/M
3300009155\|Ga0114968_10030165	All Organisms → cellular organisms → Bacteria → Proteobacteria	3642	Open in IMG/M
3300009158\|Ga0114977_10014902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4905	Open in IMG/M
3300009158\|Ga0114977_10017479	All Organisms → cellular organisms → Bacteria	4512	Open in IMG/M
3300009159\|Ga0114978_10027831	All Organisms → cellular organisms → Bacteria → Proteobacteria	4069	Open in IMG/M
3300009160\|Ga0114981_10127709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1406	Open in IMG/M
3300009164\|Ga0114975_10014346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4877	Open in IMG/M
3300009180\|Ga0114979_10007100	All Organisms → cellular organisms → Bacteria	7353	Open in IMG/M
3300009181\|Ga0114969_10302339	Not Available	943	Open in IMG/M
3300009183\|Ga0114974_10004771	Not Available	10128	Open in IMG/M
3300009183\|Ga0114974_10692877	Not Available	554	Open in IMG/M
3300009184\|Ga0114976_10038743	All Organisms → cellular organisms → Bacteria → Proteobacteria	2844	Open in IMG/M
3300010368\|Ga0129324_10086567	All Organisms → Viruses → Predicted Viral	1369	Open in IMG/M
3300011009\|Ga0129318_10087282	Not Available	871	Open in IMG/M
3300011009\|Ga0129318_10312216	Not Available	538	Open in IMG/M
3300012013\|Ga0153805_1002337	Not Available	3600	Open in IMG/M
3300012017\|Ga0153801_1001543	Not Available	4799	Open in IMG/M
3300013372\|Ga0177922_10548509	Not Available	556	Open in IMG/M
3300017701\|Ga0181364_1030784	Not Available	868	Open in IMG/M
3300017701\|Ga0181364_1042628	Not Available	721	Open in IMG/M
3300017716\|Ga0181350_1058952	Not Available	1004	Open in IMG/M
3300017716\|Ga0181350_1106472	Not Available	684	Open in IMG/M
3300017722\|Ga0181347_1073282	Not Available	1007	Open in IMG/M
3300017723\|Ga0181362_1104486	Not Available	561	Open in IMG/M
3300017736\|Ga0181365_1039197	Not Available	1192	Open in IMG/M
3300017736\|Ga0181365_1067803	Not Available	882	Open in IMG/M
3300017736\|Ga0181365_1134611	Not Available	590	Open in IMG/M
3300017736\|Ga0181365_1176122	Not Available	500	Open in IMG/M
3300017761\|Ga0181356_1029156	Not Available	1985	Open in IMG/M
3300017761\|Ga0181356_1048782	Not Available	1466	Open in IMG/M
3300017761\|Ga0181356_1171042	Not Available	661	Open in IMG/M
3300017774\|Ga0181358_1079428	Not Available	1201	Open in IMG/M
3300017777\|Ga0181357_1097549	Not Available	1116	Open in IMG/M
3300017777\|Ga0181357_1218975	Not Available	672	Open in IMG/M
3300017777\|Ga0181357_1298091	Not Available	548	Open in IMG/M
3300017778\|Ga0181349_1315181	Not Available	503	Open in IMG/M
3300017780\|Ga0181346_1203553	Not Available	713	Open in IMG/M
3300017780\|Ga0181346_1264552	Not Available	595	Open in IMG/M
3300017785\|Ga0181355_1341727	Not Available	552	Open in IMG/M
3300019784\|Ga0181359_1071858	Not Available	1309	Open in IMG/M
3300019784\|Ga0181359_1102529	Not Available	1047	Open in IMG/M
3300019784\|Ga0181359_1251213	Not Available	536	Open in IMG/M
3300019784\|Ga0181359_1263813	Not Available	515	Open in IMG/M
3300020151\|Ga0211736_10370562	Not Available	744	Open in IMG/M
3300020161\|Ga0211726_10687062	Not Available	776	Open in IMG/M
3300021312\|Ga0210306_1174383	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	1873	Open in IMG/M
3300021336\|Ga0210307_1216002	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3915	Open in IMG/M
3300021961\|Ga0222714_10166089	Not Available	1307	Open in IMG/M
3300021961\|Ga0222714_10312420	Not Available	857	Open in IMG/M
3300021962\|Ga0222713_10151070	Not Available	1602	Open in IMG/M
3300021963\|Ga0222712_10022707	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5163	Open in IMG/M
3300021963\|Ga0222712_10061102	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS3	2763	Open in IMG/M
3300021963\|Ga0222712_10210593	Not Available	1266	Open in IMG/M
3300022306\|Ga0224509_10201313	Not Available	713	Open in IMG/M
3300022407\|Ga0181351_1053654	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1676	Open in IMG/M
3300022407\|Ga0181351_1055937	Not Available	1635	Open in IMG/M
3300024346\|Ga0244775_10462050	Not Available	1039	Open in IMG/M
3300024346\|Ga0244775_11044993	Not Available	643	Open in IMG/M
3300024348\|Ga0244776_10322151	Not Available	1049	Open in IMG/M
3300025843\|Ga0209182_10179663	Not Available	593	Open in IMG/M
3300027213\|Ga0208555_1062093	Not Available	573	Open in IMG/M
3300027320\|Ga0208923_1017256	Not Available	1272	Open in IMG/M
3300027631\|Ga0208133_1050808	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300027733\|Ga0209297_1001108	Not Available	15655	Open in IMG/M
3300027733\|Ga0209297_1024102	All Organisms → cellular organisms → Bacteria	2872	Open in IMG/M
3300027734\|Ga0209087_1010827	All Organisms → cellular organisms → Bacteria	4658	Open in IMG/M
3300027763\|Ga0209088_10001526	Not Available	14959	Open in IMG/M
3300027782\|Ga0209500_10006216	All Organisms → cellular organisms → Bacteria	7684	Open in IMG/M
3300027797\|Ga0209107_10358188	Not Available	673	Open in IMG/M
3300027798\|Ga0209353_10267040	Not Available	732	Open in IMG/M
3300027808\|Ga0209354_10128818	Not Available	1033	Open in IMG/M
3300027808\|Ga0209354_10406267	Not Available	529	Open in IMG/M
3300027942\|Ga0209841_1002605	Not Available	2717	Open in IMG/M
3300027963\|Ga0209400_1033744	Not Available	2814	Open in IMG/M
3300031746\|Ga0315293_10374571	Not Available	1125	Open in IMG/M
3300031746\|Ga0315293_10722451	Not Available	738	Open in IMG/M
3300031746\|Ga0315293_11162976	Not Available	538	Open in IMG/M
3300031772\|Ga0315288_10650657	Not Available	1004	Open in IMG/M
3300031772\|Ga0315288_10878843	Not Available	815	Open in IMG/M
3300031834\|Ga0315290_10992568	Not Available	707	Open in IMG/M
3300031834\|Ga0315290_11434703	Not Available	563	Open in IMG/M
3300031885\|Ga0315285_10510858	Not Available	821	Open in IMG/M
3300031885\|Ga0315285_10587843	Not Available	741	Open in IMG/M
3300031885\|Ga0315285_10686672	Not Available	661	Open in IMG/M
3300031885\|Ga0315285_10723683	Not Available	636	Open in IMG/M
3300031952\|Ga0315294_11281042	Not Available	588	Open in IMG/M
3300031952\|Ga0315294_11495941	Not Available	528	Open in IMG/M
3300031997\|Ga0315278_10287491	Not Available	1698	Open in IMG/M
3300031997\|Ga0315278_11716047	Not Available	596	Open in IMG/M
3300031999\|Ga0315274_10671226	Not Available	1127	Open in IMG/M
3300032046\|Ga0315289_10416518	Not Available	1328	Open in IMG/M
3300032046\|Ga0315289_11441675	Not Available	530	Open in IMG/M
3300032053\|Ga0315284_11430002	Not Available	739	Open in IMG/M
3300032053\|Ga0315284_11567728	Not Available	694	Open in IMG/M
3300032070\|Ga0315279_10211636	Not Available	1495	Open in IMG/M
3300032118\|Ga0315277_10634715	Not Available	1041	Open in IMG/M
3300032143\|Ga0315292_10162149	All Organisms → cellular organisms → Bacteria → Proteobacteria	1807	Open in IMG/M
3300032143\|Ga0315292_11256071	Not Available	607	Open in IMG/M
3300032156\|Ga0315295_10554507	Not Available	1166	Open in IMG/M
3300032156\|Ga0315295_10670721	Not Available	1047	Open in IMG/M
3300032156\|Ga0315295_11475070	Not Available	656	Open in IMG/M
3300032163\|Ga0315281_11899346	Not Available	572	Open in IMG/M
3300032164\|Ga0315283_12067051	Not Available	564	Open in IMG/M
3300032173\|Ga0315268_10816499	Not Available	934	Open in IMG/M
3300032342\|Ga0315286_10809394	Not Available	947	Open in IMG/M
3300032342\|Ga0315286_10954066	Not Available	856	Open in IMG/M
3300032516\|Ga0315273_11757537	Not Available	748	Open in IMG/M
3300033233\|Ga0334722_10203730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1465	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.29%
Terrestrial	Environmental → Terrestrial	1.71%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	76.07%
Marine	Environmental → Aquatic → Marine	22.22%
Soil	Environmental → Terrestrial → Soil	1.71%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	48.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic	26.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.40%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.69%
Coastal	Environmental → Aquatic → Marine → Coastal	4.27%
Sand	Environmental → Terrestrial → Soil → Sand	1.71%
Ice	Environmental → Aquatic → Freshwater → Ice	0.85%
Sediment	Environmental → Aquatic → Marine → Sediment	0.85%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	30.77%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	25.64%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	17.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.40%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	7.69%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.27%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.71%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	29.06%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	25.64%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	14.53%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	7.69%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.13%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	4.27%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.42%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.56%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	1.71%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.71%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.71%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.85%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.85%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005990	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T3_30-Apr-14	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300021312	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1072 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021336	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022306	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_24	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025843	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm (SPAdes)	Environmental	Open in IMG/M
3300027213	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027942	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_30-Apr-14 (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0073921_10988362	3300005990	Sand	MQCPKCSHSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPQLPAGRPPG
Ga0070744_100603701	3300006484	Estuarine	MQCPKCSHSRHGVRSSNSQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHI
Ga0070744_101120331	3300006484	Estuarine	MQCPKCSHSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHI
Ga0102817_10605852	3300007555	Estuarine	MQCPKCSHSRHGVRSSNNQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNNAPQVVGDN*
Ga0102859_11557282	3300007708	Estuarine	VATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPQLPAGRPPGPHYELLQQQ*
Ga0105745_10868953	3300007972	Estuary Water	MQCPKCDHSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLRQAVTLELGFVPQLPPGRPPRGHITNRDSRNDAPQVGGIIRGRPKGLPPTSQK*
Ga0105746_12208032	3300007973	Estuary Water	MQCPKCSHGRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQR
Ga0102831_12761912	3300008996	Estuarine	MLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQRQ*
Ga0102829_10224198	3300009026	Estuarine	MQCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTESSKPVLRRAVTLELGFVPELPRGRPPRGHITNCDSPGDVPQVGGDN*
Ga0105152_100634593	3300009039	Lake Sediment	MQCPKCSHGRHRAAIVNGLLADQVVRKRVCAECGHKWFTVEAEVSRYAIGWSSEHQNKPVLRVPVTLQLGFVAELPRGRPPLPDYELLQPD*
Ga0114968_100301658	3300009155	Freshwater Lake	MQCPKCSHSRHRAAITNSRVPDQVVRKRVCEACGHMWFTVEAEVSRYSIGWCSKHQNKPVLRVPVTLELGFVECLPPGRPPLPHYDL*
Ga0114977_100149028	3300009158	Freshwater Lake	MQCPKCSHSRHRVVIVNNRVPDQVVRKRVCEACGHMWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLELDFVPQLPQGRPPLPHYDL*
Ga0114977_100174798	3300009158	Freshwater Lake	MQCPKCSHNRHRAAITNSRVLDQVVRKRVCEACGHMWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLELDFVPCLPPGRPPLPHYEL*
Ga0114978_100278315	3300009159	Freshwater Lake	MQCPKCSHSRHRVAIINSRVLDQVVRKRVCEQCGHQWFTVEAEVSRYAIGWCSEHQNKPVLRVPVTLQLGFVPCLPPGRPPLPHYEL*
Ga0114981_101277091	3300009160	Freshwater Lake	MMPMKCPKCSHNRHRVVIVNNRVPDQVVRKRVCEACGHMWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLELDFVPQLPQGRPPLPHYDL*
Ga0114975_100143462	3300009164	Freshwater Lake	MQCPKCSHNRHRAAITNSRVLDQVVRKRVCEECGHQWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLELDFVPCLPPGRPPLPHYEL*
Ga0114979_1000710010	3300009180	Freshwater Lake	MMPMKCPKCSHNRHRVVIVNNRVPDQVVRKRVCEHCGHQWFTVEAEVSRYSIGWSSEHQNKPVLRVPVSLELGFVECLPPGRPPLPHYEL*
Ga0114969_103023393	3300009181	Freshwater Lake	MQCPKCSHSRHRAAITNSRVPDQVVRKRVCEACGHMWFTVEADVSRYSIGWCSKHQNKPVLRVPVTLELGFVECLPPGRPPLPHYDL*
Ga0114974_100047714	3300009183	Freshwater Lake	MMPMKCPKCSHSRHRVAIVNNRVPDQVVRKRVCEACGHMWFTVEAEVSRYSIGWSSEHQNKPVLRVPVSLELGFVECLPPGRPPLPHYEL*
Ga0114974_106928772	3300009183	Freshwater Lake	SVLMQCPKCSHSRHRVVIVNNRVPDQVVRKRVCEACGHMWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLELGFVECLPPGRPPLPHYEL*
Ga0114976_100387436	3300009184	Freshwater Lake	MQCPKCSHSRHRVVIVNNRVPDQVVRKRVCEACGHMWFTVEAEVSRYSIGWSSEHHNKPVLRVPVTLELDFVPQLPQGRPPLPHYDL*
Ga0129324_100865671	3300010368	Freshwater To Marine Saline Gradient	MQCPKCSHSRHGVRSSNSQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSRNDAPQVVGDN*
Ga0129318_100872822	3300011009	Freshwater To Marine Saline Gradient	MQCPKCRHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLRQAVTLELGFVPPLPPGRPPRGHITNRDSRGDAPPMVGHN*
Ga0129318_103122162	3300011009	Freshwater To Marine Saline Gradient	MQCPKCSHSRHGVRSSNSQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNC
Ga0153805_10023378	3300012013	Surface Ice	MQCPKCSHSRHGVRSSNSQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDIRGDAPPVVGDN*
Ga0153801_10015436	3300012017	Freshwater	MQCPKCSHSHHRVAIINSRVPDQVVRKRVCEQCGHQWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLQLGFVPQLPPGRPPRGHITNCDIRGDAPPVVGDN*
Ga0177922_105485092	3300013372	Freshwater	MQCPKCSHSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPSRGHITNCYSGNDAPPVVGDN*
Ga0181364_10307843	3300017701	Freshwater Lake	MQCPKCSHGRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCYSGN
Ga0181364_10426283	3300017701	Freshwater Lake	PDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSGNDAPPVVGDN
Ga0181350_10589522	3300017716	Freshwater Lake	MQCPNCRDSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPLLREAVTLELGFVPQLPPGRTPRGHITNCDSRNDAPQVVGDN
Ga0181350_11064722	3300017716	Freshwater Lake	MQCPKCSHSRHGVRSSNSQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDIRGDAPPVVGDN
Ga0181347_10732824	3300017722	Freshwater Lake	MQCPKCSHSRHVVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNDAPHVGVDN
Ga0181362_11044862	3300017723	Freshwater Lake	QVPDQVVRQRVCQACGSMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNDAPQVGGDN
Ga0181365_10391972	3300017736	Freshwater Lake	MQCPKCSHGRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQPQ
Ga0181365_10678032	3300017736	Freshwater Lake	MQCPNCRDSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPLLREAVTLELGFVPQLPPGRPPRGHITNCDSRNDALQVVGDN
Ga0181365_11346112	3300017736	Freshwater Lake	MQCPNCRDSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSNPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNDAPQVGGDN
Ga0181365_11761221	3300017736	Freshwater Lake	MQCPKCSHSRHVVRSSNSQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNNAP
Ga0181356_10291564	3300017761	Freshwater Lake	MQCPKCSHGRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCYSGNDAPPVVGDN
Ga0181356_10487822	3300017761	Freshwater Lake	MQCPKCRHSRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPQLPPGRPPRGHITNCYSGNDAPPVVGDN
Ga0181356_11710422	3300017761	Freshwater Lake	MQCPKCSHGRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSGNDAPPVVGDN
Ga0181358_10794282	3300017774	Freshwater Lake	MQCPKCSHGRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQQQ
Ga0181357_10975492	3300017777	Freshwater Lake	MQCPKCSHGRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSGNDAPPVVGDN
Ga0181357_12189752	3300017777	Freshwater Lake	MQCTKCRHSRHVVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNC
Ga0181357_12980911	3300017777	Freshwater Lake	HSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASRKPVLREPVTLELDPVPCLPPGRPPRGHITNCDSRNDAPQVVGDN
Ga0181349_13151812	3300017778	Freshwater Lake	LLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNDAPQVGGDN
Ga0181346_12035533	3300017780	Freshwater Lake	HSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNDAPQVGGDN
Ga0181346_12645521	3300017780	Freshwater Lake	MQCPKCSHSRHGVRSSNSQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRTPRGHITNCDSRNDAPQVVGDN
Ga0181355_13417272	3300017785	Freshwater Lake	MQCPKCSHSRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPQLPAGRPPRDHITNCYSGNDAPPVVGDN
Ga0181359_10718582	3300019784	Freshwater Lake	MQCPKCSHGRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCYSGNNAPQVVVDN
Ga0181359_11025292	3300019784	Freshwater Lake	MQCPKCRHSRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSGNDAPPVVGDN
Ga0181359_12512132	3300019784	Freshwater Lake	MQCPKCSHSRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQPQ
Ga0181359_12638131	3300019784	Freshwater Lake	MQCPKCSHSRHGVRSSNSQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNNA
Ga0211736_103705623	3300020151	Freshwater	MQCPKCSHSRHRAAITNSRVLDQVVRKRICEECGHVWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLQLGFVPCLPPGRPPLPDYEL
Ga0211726_106870621	3300020161	Freshwater	MQCPKCSHSRHRAAITNSRVLDQVVRKRICEECGHVWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLQLGFVPCLPPGRPPLPHYEL
Ga0210306_11743837	3300021312	Estuarine	MQCPKCSHSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNNAPQVVADN
Ga0210307_121600211	3300021336	Estuarine	MQCPKCSHSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNAAPQVVGDN
Ga0222714_101660894	3300021961	Estuarine Water	MQCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGDVPQVGGIIRGRPKGLPPTSQK
Ga0222714_103124204	3300021961	Estuarine Water	SQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRDHITNCDSRNDAPPVVGDN
Ga0222713_101510705	3300021962	Estuarine Water	MQCPKCSHGRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRRHIANCDSLGGVPQVVGDN
Ga0222712_100227074	3300021963	Estuarine Water	MQCPKCSHSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRVHITNRDIRGDAPPVVGIIRGRPKGLPSTSQK
Ga0222712_100611022	3300021963	Estuarine Water	MQCPKCSHSRHGVRSSNSQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRDHITNCDSRNDAPPVVGDN
Ga0222712_102105932	3300021963	Estuarine Water	MQCPKCSHSRHRVAITNNRVPDQVVRKRVCEACGHMWFTVEAEVSRYSIGWSSEHQNKPVLRVPVSLELGFVECLPPGRPPLPHYEL
Ga0224509_102013132	3300022306	Sediment	MQCPKCSHSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRVHITNRDIR
Ga0181351_10536544	3300022407	Freshwater Lake	MQCPKCSHNRHRALITNSLLETQTVRKRICNQCSHVWFTVEAEVSRYKIGWSTAHQNKPVLRTPVALQLQCVPELPPGRPKVTHDEMSQPG
Ga0181351_10559375	3300022407	Freshwater Lake	MQCPKCSHSRHVVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNN
Ga0244775_104620505	3300024346	Estuarine	VLMQCPKCSHSRHGVRSSNSQLPNQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNDAPQGVGDN
Ga0244775_110449931	3300024346	Estuarine	YPMLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQQQ
Ga0244776_103221512	3300024348	Estuarine	MQCPKCSHSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDIRGDAPQVVGDN
Ga0209182_101796632	3300025843	Lake Sediment	MQCPKCSHGRHRAAIVNGLLADQVVRKRVCAECGHKWFTVEAEVSRYAIGWSSEHQNKPVLRVPVTLQLGFVAELPRGRPPLPDYELLQPD
Ga0208555_10620932	3300027213	Estuarine	MQCPKCSHSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRDHITNCDSRNDAPQVVGDN
Ga0208923_10172566	3300027320	Estuarine	MQCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTESSKPVLRRAVTLELGFVPELPRGRPPRGHITNCDSPGDVPQVGGDN
Ga0208133_10508082	3300027631	Estuarine	MQCPKCSHSRHGVRSSNSQVPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNDAPHVVGDN
Ga0209297_100110833	3300027733	Freshwater Lake	MQCPKCSHSRHRVVIVNNRVPDQVVRKRVCEACGHMWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLELDFVPQLPQGRPPLPHYDL
Ga0209297_10241021	3300027733	Freshwater Lake	MQCPKCSHNRHRAAITNSRVLDQVVRKRVCEECGHQWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLELDFVPCLPPGRPPLPH
Ga0209087_10108278	3300027734	Freshwater Lake	MQCPKCSHNRHRAAITNSRVLDQVVRKRVCEECGHQWFTVEAEVSRYSIGWSSEHQNKPVLRVPVTLELDFVPCLPPGRPPLPHYEL
Ga0209088_1000152630	3300027763	Freshwater Lake	MMPMKCPKCSHNRHRVVIVNNRVPDQVVRKRVCEHCGHQWFTVEAEVSRYSIGWSSEHQNKPVLRVPVSLELGFVECLPPGRPPLPHYEL
Ga0209500_100062169	3300027782	Freshwater Lake	MQCPKCSHSRHRVAIINSRVLDQVVRKRVCEQCGHQWFTVEAEVSRYAIGWCSEHQNKPVLRVPVTLQLGFVPCLPPGRPPLPHYEL
Ga0209107_103581882	3300027797	Freshwater And Sediment	MQCPKCSHGRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSSNDAPPVVGDN
Ga0209353_102670402	3300027798	Freshwater Lake	MQCPKCSHSRHVVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSRNDAPQVGGDN
Ga0209354_101288183	3300027808	Freshwater Lake	MQCPKCSHGRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSSNDAPPVVGDN
Ga0209354_104062672	3300027808	Freshwater Lake	MQCPNCRDSRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPQLPPGRPPRGHITNCDSSNDAPPVVGDN
Ga0209841_10026056	3300027942	Sand	MQCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGDVPPVGGIIRRRPKGLPPTSQK
Ga0209400_10337444	3300027963	Freshwater Lake	MQCPKCSHSRHRAAITNSRVPDQVVRKRVCEACGHMWFTVEAEVSRYSIGWCSKHQNKPVLRVPVTLELGFVECLPPGRPPLPHYDL
Ga0315293_103745712	3300031746	Sediment	MQCPKCSHSRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQQQ
Ga0315293_107224512	3300031746	Sediment	MLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQPQ
Ga0315293_111629763	3300031746	Sediment	HIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQQQ
Ga0315288_106506571	3300031772	Sediment	MQCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGGVPHVGGDN
Ga0315288_108788432	3300031772	Sediment	MQCPKCSHGRHGVRSSNSQLPDQVVRQRVCQACGWMWFTVEAEVDRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSGNDAPQVVGDN
Ga0315290_109925681	3300031834	Sediment	MLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECTECGHGWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSSNDAPPVVGDN
Ga0315290_114347032	3300031834	Sediment	MLCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGDVPQVGGDN
Ga0315285_105108581	3300031885	Sediment	MQCPKCSYSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGGVPHVGGDN
Ga0315285_105878433	3300031885	Sediment	MQCPKCSHSRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQQ
Ga0315285_106866721	3300031885	Sediment	SLPATTFRNPSAGGSYPMLPMQCPKCRHSHIRTMATNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPKDVPPVGGDN
Ga0315285_107236833	3300031885	Sediment	SRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGGVPQVGGDN
Ga0315294_112810422	3300031952	Sediment	SRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGDVPQVGGDN
Ga0315294_114959412	3300031952	Sediment	MLPMQCPKCRHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQPQ
Ga0315278_102874912	3300031997	Sediment	MQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQPQ
Ga0315278_117160471	3300031997	Sediment	AGGSYPMLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECTECGHGWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPKDVPPVGGDN
Ga0315274_106712261	3300031999	Sediment	MQCPKCSHSRIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQPQ
Ga0315289_104165181	3300032046	Sediment	MLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQQQ
Ga0315289_114416751	3300032046	Sediment	MQCPNCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQPQ
Ga0315284_114300021	3300032053	Sediment	MQCPKCRHSHIRTVATNSLLPDQVVRKRECTECGHGWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPKDVPPVGGDN
Ga0315284_115677281	3300032053	Sediment	MLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPQLPPGRPPR
Ga0315279_102116361	3300032070	Sediment	AFQVGSLPATTFRNPSAGGSYPMLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGYGWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPKDVPPVGVDN
Ga0315277_106347151	3300032118	Sediment	TCCCSGELLGGACVSGRSVLMLCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGDVPQVGGDN
Ga0315292_101621494	3300032143	Sediment	MQCPKCRHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQQQ
Ga0315292_112560711	3300032143	Sediment	MQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELDFVPPLPAGRPPGPHYELLQPQ
Ga0315295_105545071	3300032156	Sediment	PSAGGSYPMLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQPQ
Ga0315295_106707215	3300032156	Sediment	LPMQCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGDVPQVGGDN
Ga0315295_114750701	3300032156	Sediment	MLCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSTG
Ga0315281_118993461	3300032163	Sediment	MLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELDFVPPLPAGRPPGPHYELLQPQ
Ga0315283_120670511	3300032164	Sediment	VSGRSVLMLCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGGVPHVGGDN
Ga0315268_108164992	3300032173	Sediment	MQCPKCLQSRHRAAITNNRVPDQVVRKRVCEACGHMWFTVEAEVSQYSIGWSSEHQNKPVLRVPVTLQLGFVPPLPPGRPPLPHCELLQPD
Ga0315286_108093941	3300032342	Sediment	MLPMQCPKCSHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYEL
Ga0315286_109540661	3300032342	Sediment	VATNSLLPDQVVRKRECAECGHGWFTVEAEVSRFAIGWSTEYQNKPVLREAVTLELGFVPPLPAGRPPGPHYELLQPQ
Ga0315273_117575372	3300032516	Sediment	MLCPKCSHSRHGVKSSNSQLPDQVVRQRVCQACGWMWFTVEAEVNRFAIGWSTASSKPVLREAVTLELGFVPELPRGRPPRGHITNCDSPGGVPHVGGDN
Ga0334722_102037301	3300033233	Sediment	MQCPKCRHSHIRTVATNSLLPDQVVRKRECAECGHGWFTVEAEVNRFAIGWSTEYQNKPVLREAVTLELDFVPPLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077290

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences