Metagenome / Metatranscriptome Family F077310

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077310
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	98 residues
Representative Sequence	MTLDANSVIIVIVASILSGMGTALVAEIKESKKEKIRRAEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIVMHE
Number of Associated Samples	81
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.53 %
% of genes near scaffold ends (potentially truncated)	15.38 %
% of genes from short scaffolds (< 2000 bps)	60.68 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.504 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (23.932 % of family members)
Environment Ontology (ENVO)	Unclassified (64.103 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (75.214 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.02% β-sheet: 0.00% Coil/Unstructured: 25.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF02467	Whib	23.08
PF00082	Peptidase_S8	6.84
PF00085	Thioredoxin	5.98
PF05257	CHAP	3.42
PF13640	2OG-FeII_Oxy_3	1.71
PF02675	AdoMet_dc	0.85
PF14579	HHH_6	0.85
PF00166	Cpn10	0.85
PF13936	HTH_38	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.92 %
Unclassified	root	N/A	23.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.50 %
Unclassified	root	N/A	23.08 %
Viruses	superkingdom	All Organisms → Viruses	3.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.50 %
Unclassified	root	N/A	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.56 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.09 %
Unclassified	root	N/A	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.56 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	70.09 %
Unclassified	root	N/A	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.56 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.85 %

Name	Rank	Taxonomy	Distribution
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	70.09 %
Unclassified	root	N/A	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.56 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.85 %

Name	Rank	Taxonomy	Distribution
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	70.09 %
Unclassified	root	N/A	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.56 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Methylophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae	70.09 %
Unclassified	root	N/A	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.56 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.85 %

Name	Rank	Taxonomy	Distribution
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	70.09 %
Unclassified	root	N/A	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.56 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000736\|JGI12547J11936_1001083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	7618	Open in IMG/M
3300000756\|JGI12421J11937_10008695	Not Available	3940	Open in IMG/M
3300000756\|JGI12421J11937_10108962	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300002408\|B570J29032_109211236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	637	Open in IMG/M
3300004112\|Ga0065166_10199770	Not Available	787	Open in IMG/M
3300004240\|Ga0007787_10032651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2256	Open in IMG/M
3300005580\|Ga0049083_10002666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	6776	Open in IMG/M
3300005580\|Ga0049083_10310589	Not Available	527	Open in IMG/M
3300005583\|Ga0049085_10207766	Not Available	649	Open in IMG/M
3300005583\|Ga0049085_10296911	Not Available	525	Open in IMG/M
3300005662\|Ga0078894_10040197	Not Available	3910	Open in IMG/M
3300005662\|Ga0078894_10041719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3845	Open in IMG/M
3300006484\|Ga0070744_10003483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	4730	Open in IMG/M
3300006484\|Ga0070744_10060949	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300006875\|Ga0075473_10107095	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300007544\|Ga0102861_1095336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	793	Open in IMG/M
3300007559\|Ga0102828_1016758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1557	Open in IMG/M
3300007634\|Ga0102901_1227212	Not Available	524	Open in IMG/M
3300007708\|Ga0102859_1084674	Not Available	904	Open in IMG/M
3300007974\|Ga0105747_1035038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1434	Open in IMG/M
3300008107\|Ga0114340_1008022	Not Available	9771	Open in IMG/M
3300008107\|Ga0114340_1046268	All Organisms → Viruses → Predicted Viral	2585	Open in IMG/M
3300008107\|Ga0114340_1269391	Not Available	507	Open in IMG/M
3300008111\|Ga0114344_1003247	Not Available	20859	Open in IMG/M
3300008113\|Ga0114346_1030232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2843	Open in IMG/M
3300008953\|Ga0104241_1003705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1107	Open in IMG/M
3300008962\|Ga0104242_1001653	Not Available	4478	Open in IMG/M
3300008962\|Ga0104242_1032583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	891	Open in IMG/M
3300008996\|Ga0102831_1116655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	887	Open in IMG/M
3300009059\|Ga0102830_1193271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	595	Open in IMG/M
3300009155\|Ga0114968_10259706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	984	Open in IMG/M
3300009159\|Ga0114978_10122718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1694	Open in IMG/M
3300009159\|Ga0114978_10271651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1046	Open in IMG/M
3300009159\|Ga0114978_10335258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	918	Open in IMG/M
3300009159\|Ga0114978_10374681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	857	Open in IMG/M
3300009161\|Ga0114966_10062778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2593	Open in IMG/M
3300009161\|Ga0114966_10130550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1655	Open in IMG/M
3300009164\|Ga0114975_10129468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1451	Open in IMG/M
3300009183\|Ga0114974_10123115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1647	Open in IMG/M
3300009183\|Ga0114974_10150000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1458	Open in IMG/M
3300009183\|Ga0114974_10196930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1232	Open in IMG/M
3300009183\|Ga0114974_10767265	Not Available	519	Open in IMG/M
3300009419\|Ga0114982_1003994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	5915	Open in IMG/M
3300009419\|Ga0114982_1044744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1405	Open in IMG/M
3300010334\|Ga0136644_10011521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	6153	Open in IMG/M
3300011116\|Ga0151516_11107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	11507	Open in IMG/M
3300012000\|Ga0119951_1099624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	697	Open in IMG/M
3300012006\|Ga0119955_1000509	Not Available	21186	Open in IMG/M
3300012665\|Ga0157210_1065284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	550	Open in IMG/M
3300012774\|Ga0138283_1151963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	736	Open in IMG/M
3300013006\|Ga0164294_10646523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	715	Open in IMG/M
3300014819\|Ga0119954_1050151	Not Available	724	Open in IMG/M
3300017774\|Ga0181358_1003253	Not Available	7180	Open in IMG/M
3300019784\|Ga0181359_1077959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1246	Open in IMG/M
3300020048\|Ga0207193_1034654	Not Available	5702	Open in IMG/M
3300020141\|Ga0211732_1581030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2052	Open in IMG/M
3300020151\|Ga0211736_10428187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	755	Open in IMG/M
3300020159\|Ga0211734_10644521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1003	Open in IMG/M
3300020161\|Ga0211726_10312733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	541	Open in IMG/M
3300020172\|Ga0211729_10678843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	4757	Open in IMG/M
3300020575\|Ga0208053_1082514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	582	Open in IMG/M
3300021519\|Ga0194048_10158116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	850	Open in IMG/M
3300021600\|Ga0194059_1253543	Not Available	526	Open in IMG/M
3300021602\|Ga0194060_10130715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1352	Open in IMG/M
3300021956\|Ga0213922_1038855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1102	Open in IMG/M
3300022748\|Ga0228702_1112948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	625	Open in IMG/M
3300022752\|Ga0214917_10253351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	819	Open in IMG/M
3300023174\|Ga0214921_10011203	Not Available	10937	Open in IMG/M
3300023174\|Ga0214921_10026028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	5952	Open in IMG/M
3300023174\|Ga0214921_10032386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	5069	Open in IMG/M
3300023174\|Ga0214921_10047489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3837	Open in IMG/M
3300023174\|Ga0214921_10097523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2225	Open in IMG/M
3300023174\|Ga0214921_10183004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1345	Open in IMG/M
3300023179\|Ga0214923_10109093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1841	Open in IMG/M
3300023184\|Ga0214919_10010667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	11592	Open in IMG/M
3300023184\|Ga0214919_10399548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	892	Open in IMG/M
3300024346\|Ga0244775_10007085	Not Available	11060	Open in IMG/M
3300024346\|Ga0244775_10161525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1889	Open in IMG/M
3300024346\|Ga0244775_10459062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1043	Open in IMG/M
3300024346\|Ga0244775_11454903	Not Available	525	Open in IMG/M
3300025635\|Ga0208147_1081832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	796	Open in IMG/M
3300027129\|Ga0255067_1037057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	698	Open in IMG/M
3300027132\|Ga0255110_1000060	Not Available	30302	Open in IMG/M
3300027143\|Ga0255105_1010763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1839	Open in IMG/M
3300027621\|Ga0208951_1000004	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	115112	Open in IMG/M
3300027621\|Ga0208951_1186045	Not Available	525	Open in IMG/M
3300027644\|Ga0209356_1071455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1046	Open in IMG/M
3300027710\|Ga0209599_10001951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	9085	Open in IMG/M
3300027710\|Ga0209599_10016480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2136	Open in IMG/M
3300027720\|Ga0209617_10144431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	938	Open in IMG/M
3300027734\|Ga0209087_1031775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2519	Open in IMG/M
3300027747\|Ga0209189_1046136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2134	Open in IMG/M
3300027754\|Ga0209596_1001657	Not Available	18940	Open in IMG/M
3300027754\|Ga0209596_1003081	Not Available	13328	Open in IMG/M
3300027754\|Ga0209596_1006293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	8607	Open in IMG/M
3300027759\|Ga0209296_1019785	Not Available	3851	Open in IMG/M
3300027759\|Ga0209296_1035231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2723	Open in IMG/M
3300027759\|Ga0209296_1136412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1120	Open in IMG/M
3300027763\|Ga0209088_10175550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	931	Open in IMG/M
3300027769\|Ga0209770_10072760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1438	Open in IMG/M
3300027770\|Ga0209086_10196660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	932	Open in IMG/M
3300027782\|Ga0209500_10159360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1054	Open in IMG/M
3300027782\|Ga0209500_10193935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	922	Open in IMG/M
3300027797\|Ga0209107_10000143	Not Available	41587	Open in IMG/M
3300027797\|Ga0209107_10015091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	4393	Open in IMG/M
3300027804\|Ga0209358_10088801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1737	Open in IMG/M
3300027963\|Ga0209400_1181211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	889	Open in IMG/M
3300027969\|Ga0209191_1272398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	637	Open in IMG/M
3300028025\|Ga0247723_1007592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	4579	Open in IMG/M
3300028025\|Ga0247723_1059168	All Organisms → Viruses → Predicted Viral	1065	Open in IMG/M
3300034066\|Ga0335019_0007243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	7559	Open in IMG/M
3300034066\|Ga0335019_0043378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3088	Open in IMG/M
3300034068\|Ga0334990_0216339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1047	Open in IMG/M
3300034082\|Ga0335020_0006133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	7604	Open in IMG/M
3300034082\|Ga0335020_0104711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1441	Open in IMG/M
3300034093\|Ga0335012_0167435	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300034110\|Ga0335055_0011756	All Organisms → cellular organisms → Bacteria	4094	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	94.87%
Terrestrial	Environmental → Terrestrial	5.13%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	82.05%
Marine	Environmental → Aquatic → Marine	12.82%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	5.13%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	57.27%
Lentic	Environmental → Aquatic → Freshwater → Lentic	19.66%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.13%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	5.13%
River	Environmental → Aquatic → Freshwater → River	2.56%
Coastal	Environmental → Aquatic → Marine → Coastal	2.56%
Creek	Environmental → Aquatic → Freshwater → Creek	1.71%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	56.41%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	13.68%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	5.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.13%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	5.13%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	3.42%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.56%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	1.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	23.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	15.38%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.26%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.69%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	5.13%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.13%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	5.13%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.27%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	3.42%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	3.42%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.56%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.56%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	1.71%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	1.71%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.71%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.71%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.85%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.85%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.85%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008953	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT4	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300011116	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Nov	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300012774	Freshwater microbial communities from Lake Simoncouche, Canada - S_130109_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300014819	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011A	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020575	Freshwater microbial communities from Lake Mendota, WI - 20MAY2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021600	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300022748	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MG	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027129	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8h	Environmental	Open in IMG/M
3300027132	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepC_8h	Environmental	Open in IMG/M
3300027143	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_8h	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027720	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034110	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12547J11936_10010833	3300000736	Freshwater And Sediment	MSMDANSVIIVIIASVLSGIGTAMFNGIKESRREKSRKIEREQDLLKMELKDLEIKLYKLEKDLIEWRDKYYNAIQELIEVKGELENCLVELSHIAHHED*
JGI12421J11937_100086959	3300000756	Freshwater And Sediment	MSIDANSVIIVIAASILSGIGTALVNGIKESKREKIRQSEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIAMHE*
JGI12421J11937_101089622	3300000756	Freshwater And Sediment	MALDSNSVIIVIVASILSGMGTALIKEIKESKKEKIRRAERDQDMLKMDLKDLEIKLYKLEKDLAEWRDKYYDALQELIEVKAELEDTLIKLTHIGLHD*
B570J29032_1092112361	3300002408	Freshwater	MNVSTSQIILAILASILSGFGTALYGSIREKRKEKFRAQEKVQIDLKLELKDLEIKLYQLEKDLHEWKSKYYEAIQELIAVKAELEDTLIKLTHIQIHLNEG*
Ga0065166_101997702	3300004112	Freshwater Lake	MTLDSNSVIIVIVASILSGMGTALIKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIVMHE*
Ga0007787_100326511	3300004240	Freshwater Lake	MTLDSNSVIIVIVASILSGMGTALVKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLTEWRDRYYEALQELIEVKAELEDTLIKLTHIVMHE*
Ga0049083_100026669	3300005580	Freshwater Lentic	MNVSTSQIILAILASILSGFGTALYGSIREKKREAFRAQEKIQIDLKLELKDLEIKLYQLEKDLNEWKDKYYEAIQELIAVRAELEDTLIKLTHIQIHLNEG*
Ga0049083_103105892	3300005580	Freshwater Lentic	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKGELENCLVELSHIVHHED*
Ga0049085_102077662	3300005583	Freshwater Lentic	MSIDANSVIIVIAASILSGIGTALVNGIKESKREKIRQSEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYETLQELIEVKAELEDTLIKLTHIAMHE*
Ga0049085_102969111	3300005583	Freshwater Lentic	MNVSTSQIMLAIFASILSGFGTALYGSIREKKRENFRAQQKIQIDLKLELKDLEIKLYQLEKDLHEWKDKYYEAIQELIAVKAELEDTLI
Ga0078894_100401979	3300005662	Freshwater Lake	MTLDSNSVIIVIVASILSGMGTALVKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLTEWRDRYYEALQELIEVKAELEDTLIKLNHIVMHE*
Ga0078894_100417194	3300005662	Freshwater Lake	MTLDSNSIIIVIAASILSGMGTALVNGIRESKKEKNRQAEREQDMLKMDLKDLEIKLYKLERDLIEWRDKYYAAVQELIEVKAELEDTLIKLNHIVLHD*
Ga0070744_100034839	3300006484	Estuarine	MTLDSNSIIIVIVASILSGMGTALVKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLTEWRDRYYEALQELIEVKAELEDTLIKLNHIVMHE*
Ga0070744_100609493	3300006484	Estuarine	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKGELENCLVELSHIIHHED*
Ga0075473_101070953	3300006875	Aqueous	MTLDANSIIIVIAASILSGMGTALVAEIKESKREKVRRAEREQDMLKMELKDLEIKLYKLERDLIEWRDKYYEAVQELIEVKAELEDTLIKLTHLNIHD*
Ga0102861_10953362	3300007544	Estuarine	MNVSSSQIILTILASILSGFGTAWYGSIREKKREIFRSQEKAQTDLKLELKDLEIKLYQLEKDLSEWRDKYYEAIQELIAVRAELEDTLIKLTHIQIHLNEG*
Ga0102828_10167582	3300007559	Estuarine	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKGELENCLIELSHIVHHED*
Ga0102901_12272122	3300007634	Estuarine	MSIDANSVIIVIAASILSGIGTALVNGIKESKREKIRQTEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIAMHE*
Ga0102859_10846741	3300007708	Estuarine	MDANSVIIVIAASILSGIGTALVNGIKESKREKIRQTEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIAMHE*
Ga0105747_10350382	3300007974	Estuary Water	MNVSSSQIILTILASILSGFGTAWYGSIREKKREIFRSQEKAQTDLKLELKDLEIKLYQLEKDLSEWRDKYYEAIQELIAVKAELEDTLIKLTHIQIHLNEG*
Ga0114340_100802217	3300008107	Freshwater, Plankton	MDANSVIIVIIASVLSGIGTAMFNGIKESRREKSRKIEREQDLLKMELKDLEIKLYKLEKDLIEWRDKYYNAIQELIEVKGELENCLVELSHIAHHED*
Ga0114340_10462682	3300008107	Freshwater, Plankton	MTLDSNSIIIVIAASILSGMGTALVNGIRESKKEKNRRAEREQDMLKMELKDLEIKLYKLERDLIEWRDKYYAAVQELIEVKAELEDTLIKLNHIILHD*
Ga0114340_12693911	3300008107	Freshwater, Plankton	MSIDANSVIIVIIASVLSGIGTAMFNGIKESRREKNRKIEREQDLLKMELKDLEIKLYKLEKDLDEWRDKYYEALKELIEVKGELENCLVELSHIVHHED*
Ga0114344_100324710	3300008111	Freshwater, Plankton	MDANSVIIVIIASVLSGIGTAMFNGIKESRREKSRKIEREQDLLKMELKDLEIKLYKLEKDLIEWRDKYYNAIQELIEVITRTSVSNLYLVY*
Ga0114346_103023211	3300008113	Freshwater, Plankton	MTLDANSIFIVIIASILSGIGTAFVGGIKDAKREKIRQAEREQDILRMELKDLEIKLYKLERDLIEWRDKYYQAVQELIEVKAELEDTLIKLSHINIHE*
Ga0104241_10037052	3300008953	Freshwater	MTLDANSIIIVIAASILSGMGTALVAEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLERDLIEWRDKYYEAVQELIEVKAELEDTLIKLTHIGMHE*
Ga0104242_100165313	3300008962	Freshwater	MDLLSVSIAISAAILSGMGTAIISGIKESKREKTRQAEREHDHLKLELKDLKIQLYQVERDLTEWKDKYYSAIQELIVVKAELEETLIKIS
Ga0104242_10325832	3300008962	Freshwater	MSIDANSVIIVIVASILSGMGTAMINGIKESRKEKIRQSEREQDMLKIDLKDLEIKLYKLEKDLAEWRDKYYDTLQKLIDVKAELEDTLIKLSHIGLHE*
Ga0102831_11166552	3300008996	Estuarine	MNVSSSQIILTILASILSGFGTARYGSIREKKREIFRSQEKAQTDLKLELKDLEIKLYQLEKDLSEWRDKYYEAIQELIAVRAELEDTLIKLTHIQIHLNEG*
Ga0102830_11932712	3300009059	Estuarine	ASILSGMGTALVAEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKGELENCLVELSHIIHHED*
Ga0114968_102597062	3300009155	Freshwater Lake	MDANSVIIVIIASVLSGIGTAMFNSIKESRRERNRKIEREQDMLKMELKDLEIKLYKLEKDLDEWRNKYYQALQELIEVKGELENCLVELSHIAHHED*
Ga0114978_101227182	3300009159	Freshwater Lake	MTLDANSVIIVIVASILSGMGTALVAEIKESKREKIRQTEREQDMLKMELKDLEIKLYKLEKDLTEWRDKYYEAIQELIEVKAELEDTLIKLTHIVMHE*
Ga0114978_102716513	3300009159	Freshwater Lake	MTLDANSVIIVIIASILSGMGTALVSGLKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKGELENCLVELSHIVHHED*
Ga0114978_103352581	3300009159	Freshwater Lake	MTLDANSVIIVIIASILSGMGTALVSGLKESKREKIRRTEREQEMLKMELKDLEIKLYKLEKDLVEWRDKYYAAVQELIEVKAELEDTLIKLNHIILHD*
Ga0114978_103746812	3300009159	Freshwater Lake	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYAAVQELIEVKSELENCLIELSHIAHHED*
Ga0114966_100627789	3300009161	Freshwater Lake	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYAAVQELIEVKSELENCLIELSHIVHHED*
Ga0114966_101305502	3300009161	Freshwater Lake	MTLDSNSIIIVIVASILSGMGTALVKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLTEWRDKYYQALQELIEVKAELEDTLIKLNHIVMHE*
Ga0114975_101294682	3300009164	Freshwater Lake	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLVEWRDKYYAAVQELIEVKSELENCLIELTHIVHHED*
Ga0114974_101231152	3300009183	Freshwater Lake	MSIDANSIVIVIVASILSGMGTAMINGIKESRKEKIRQSEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYQALKELIEIKAELEDTLIKLTHIGMHE*
Ga0114974_101500002	3300009183	Freshwater Lake	MDANSVIIVIIASVLSGIGTAMFNSIKESKKERNRKIEREQDMLKMELKDLEIKLYKLEKDLDEWRNKYYEALQELIEVKGELENCLVELSHIAHHED*
Ga0114974_101969301	3300009183	Freshwater Lake	MTLDANSVIIVIIASILSGMGTALVSGFKESKREKIRRTEREQDMLKMELKDLEIKLYKLEKDLIEWRDKYYQAVQELIEVKAELEDTLIKLNHITLHE*
Ga0114974_107672652	3300009183	Freshwater Lake	MDANSVIIVIIASVLSGIGTAMFNGIKESKRERNRKIEREQDMLKMELKDLEIKLYKLEKDLDEWRNKYYQALQELIEVKGELENCLVELSHIAHHED*
Ga0114982_10039948	3300009419	Deep Subsurface	MTLDSNSVIIVILAALLSGMGTAMINGIRESKKEKIRRTEREQDMLKMELKDLKIELYKLEKDLIEWRDKYYEAVQELIEVKGELENCLVELSHIVHHED*
Ga0114982_10447445	3300009419	Deep Subsurface	MTLDSNSIIIVIAASILSGMGTAFVNVIRESKKEKNRRAEREQDMLKMELKDLEIKLYKLERDLIEWRDKYYAAVQELIEVKAELEDTLIKLNHIILHD*
Ga0136644_1001152110	3300010334	Freshwater Lake	MSIDANSVIIVIVASILSGMGTAMINGIKESKKEKIRQSEREQDMLKMELKDLEIKLYKLEKDLVEWRDKYYAAVQELIEVKSELENCLIELNHIVHHED*
Ga0151516_1110723	3300011116	Freshwater	MTLDANSVIIVIVASILSGMGTALVAEIKESKREKVRQAEREQDMLRMELKDLEIKLYKLEKDLIEWRDKYYAAVQELIEVKAELEDTLIKLNHIILHD*
Ga0119951_10996242	3300012000	Freshwater	MTLDSNSIIIVIAASILSGMGTAFVGNYKESKKEKARLAEREQDMLKMELKDLEIKLYKLERDLIEWRDRYYNTLQELIEVKAELESTLIKLTHIGMHE*
Ga0119955_100050947	3300012006	Freshwater	MPLDANYIVVVISASAVSGIGTALVVGRIEAKREKIRKTEREQDALKIELKDLQIKLYQLEKDLNEWREKYYNAIQELISVKAELEESLIKLSLIDLELHTHDD*
Ga0157210_10652842	3300012665	Freshwater	MTLDANSVIIVIIASILSGMGTALVSGLKESKREKIRRTEREQDMLKMELKDLEIKLYKLEKDLVEWRDKYYAAVQELIEVKAELEDTLVKLNHIILHD*
Ga0138283_11519631	3300012774	Freshwater Lake	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLVEWRDKYYAAVQELIEVKSELENCLIELSHIAHHED*
Ga0164294_106465232	3300013006	Freshwater	MTLDANSVIIVIIASIVSGMGTALVSGFKESKKEKIRKNEREQDLLKMELKDLEIKLYKLEKDLIEWRDKYYEAVQELIEVKAELENTLIKLTYLKPID*
Ga0119954_10501513	3300014819	Freshwater	MPLDANYIVVVISASAVSGIGTALVVGRIEAKREKIRKTEREQDALKIELKDLQIKLYQLEKDLNEWREKYYNAIQELISVKAEQFGTISSP
Ga0181358_10032539	3300017774	Freshwater Lake	MSIDANSVIIVIAASILSGIGTALVNGIKESKREKIRQSEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALKELIEVKAELEDTLIKLTHIAMH
Ga0181359_10779594	3300019784	Freshwater Lake	MSIDANSVIIVIVASILSGIGTALVNGIKESKREKIRQSEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALKELIEVKAELEDTLIKLTHIAMH
Ga0207193_10346549	3300020048	Freshwater Lake Sediment	MTLDSNSVIIVIVASILSGMGTALVKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLTEWRDRYYEALQELIEVKAELEDTLIKLNHIVLHE
Ga0211732_15810302	3300020141	Freshwater	MNVSTSQIILAILASILSGFGTALYGSIRERKKEAFRAQEKIQTDLKLELKDLEIKLYQLEKDLHEWKSKYYEAIQELIAVKAELEDTLIKLSHIQIHLNEG
Ga0211736_104281871	3300020151	Freshwater	VIAASILSGIGTALVNGIKEAKREKNRRVEREQDMLKMELKDLEIKLYKLEKDLTEWRDKYYEALQELIEVKAELEDTLIKLSHIVHHED
Ga0211734_106445213	3300020159	Freshwater	MTLDANSVIIVIAASILSGIGTALVNGIKEAKREKNRRVEREQDMLKMELKDLEIKLYKLEKDLTEWRDKYYEALQELIEVKAELEDTLIKLSHIVHHED
Ga0211726_103127332	3300020161	Freshwater	IVIAASILSGIGTALVNGIKEAKREKNRRVEREQDMLKMELKDLEIKLYKLEKDLTEWRDKYYEALQELIEVKAELEDTLIKLSHIVHHED
Ga0211729_106788439	3300020172	Freshwater	MTLDANSVIIVIAASILSGIGTALVNGIKEAKREKNRRVEREQDMLKMELKDLEIKLYKLEKDLTEWRDKYYEALQELIEVKAELEDTLIKLTHIVMHE
Ga0208053_10825142	3300020575	Freshwater	MNVSTSQIILAILASILSGFGTALYGSIREKRKEKFRAQEKVQIDLKLELKDLEIKLYQLEKDLHEWKSKYYEAIQELIAVKAELEDTLIKLTH
Ga0194048_101581161	3300021519	Anoxic Zone Freshwater	ILSGMGTALVSGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYAAVQELIEVKSELENCLIELTHIVHHED
Ga0194059_12535432	3300021600	Anoxic Zone Freshwater	MTLDANSVIIVIVASILSGMGTALVAEIKESKKEKIRRAEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIVMHE
Ga0194060_101307155	3300021602	Anoxic Zone Freshwater	MTLDSNSILIVIIASILSGMGTALVSGIKEFKREKIRQAEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYAAVQELIEVKSELENCLIELTHIVHHED
Ga0213922_10388553	3300021956	Freshwater	MKVSTLQILITILVSILSGFGTALFNSLKEKKREAIRKQEKIQNDLKLELKDLEIKLYQLEKDLHDWKDKYYEAIQELIQVKAELEETLIKLSHIQIHLNEG
Ga0228702_11129482	3300022748	Freshwater	MTLDSNSIIIVIAASILSGMGTAFVGNYKESKKEKARLAEREQDMLKMELKDLEIKLYKLERDLIEWRDRYYNTLQELIEVKAELESTLIKLTHIGMHE
Ga0214917_102533511	3300022752	Freshwater	ASILSGLGTAIFDGIKESKREKVRQNEREQDLLKMELKDLEIKLYKLEKDLAEWRDKYYDALKELIEIKAELEDTLIKLSHIGMHE
Ga0214921_1001120326	3300023174	Freshwater	MSIDANSVIIVIVASILSGMGTAMINGIKESRKEKIRQSEREQDMLKIDLKDLEIKLYKLEKDLAEWRDKYYDTLQKLIDVKAELEDTLIKLSHIGLHE
Ga0214921_100260289	3300023174	Freshwater	MTLDANSVIIVIIASILSGMGTALVSGIKESKREKARLVEREQDLLKMDLKDLEIKLYKLEKDLSEWRDKYYSALQELIEVKAELEETLIKLTHIGLHE
Ga0214921_100323868	3300023174	Freshwater	MTLDANSIIIVIAASILSGMGTALVAEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLERDLIEWRDKYYEAVQELIEVKAELEDTLIKLTHLNIHD
Ga0214921_100474891	3300023174	Freshwater	MTLDSNSIIIVIAASILSGMGTAFVGNYKESKKEKARLAEREQDMLKMELKDLEIKLYKLERDLIEWRDRYYNTLQELIEVKAELESTLIKLTHIGM
Ga0214921_100975234	3300023174	Freshwater	MTLDANSVIIVIVASILSGMGTALVAEIKESKKEKIRRTEREQDMLKMELKDLEIKLYKLEKDLIEWRDKYYEAVQELIEVKAELEDTLIKLNHIILHE
Ga0214921_101830042	3300023174	Freshwater	MSIDANSVIIVIVASILSGMGTAMINEIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYAAVQELIEVKSELENCLIELSHIVHHED
Ga0214923_101090932	3300023179	Freshwater	MTLDSNSIIIVIAASILSGMGTAFVSNYKESKKEKARIVEREQDMLKMELKDLEIKLYKLERDLIEWRDRYYNTLQELIEVKAELESTLIKLTHIGMHE
Ga0214919_1001066712	3300023184	Freshwater	MPLDANYIVVVISASAVSGIGTALVVGRIEAKREKIRKTEREQDALKIELKDLQIKLYQLEKDLNEWREKYYNAIQELISVKAELEESLIKLSLIDLELHTHDD
Ga0214919_103995482	3300023184	Freshwater	MTLDANSVIIVIIASILSGMGTALVSGLKESKRERIRRTEREQDMLKMELKDLEIKLYKLEKDLVEWRDKYYAAVQELIEVKAELEDTLIKLTHINMHE
Ga0244775_1000708510	3300024346	Estuarine	MTLDSNSIIIVIVASILSGMGTALVKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLTEWRDRYYEALQELIEVKAELEDTLIKLNHIVMHE
Ga0244775_101615255	3300024346	Estuarine	MNVSNSQIILTILASILSGFGTALYGSIREKKREIFRSQEKAQTDLKLELKDLEIKLYQLEKDLSEWRDKYYEAIQELIAVRAELEDTLIKLTHIQIHLNEG
Ga0244775_104590624	3300024346	Estuarine	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKGELENCLIELSHIVHHED
Ga0244775_114549032	3300024346	Estuarine	MSIDANSVIIVIAASILSGIGTALVNGIKESKREKIRQTEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIAMHE
Ga0208147_10818324	3300025635	Aqueous	MTLDANSIIIVIAASILSGMGTALVAEIKESKREKVRRAEREQDMLKMELKDLEIKLYKLERDLIEWRDKYYEAVQELIEVKAE
Ga0255067_10370572	3300027129	Freshwater	MDANSVIIVIAASILSGIGTALVNGIKESKREKIRQTEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIAMHE
Ga0255110_100006023	3300027132	Freshwater	MDANSVIIVIIASVLSGIGTAMFNGIKESRREKSRKIEREQDLLKMELKDLEIKLYKLEKDLIEWRDKYYNAIQELIEVKGELENCLVELSHIAHHED
Ga0255105_10107635	3300027143	Freshwater	IMSMDANSVIIVIIASVLSGIGTAMFNGIKESRREKSRKIEREQDLLKMELKDLEIKLYKLEKDLIEWRDKYYNAIQELIEVKGELENCLVELSHIAHHED
Ga0208951_1000004173	3300027621	Freshwater Lentic	MNVSTSQIILAILASILSGFGTALYGSIREKKREAFRAQEKIQIDLKLELKDLEIKLYQLEKDLNEWKDKYYEAIQELIAVRAELEDTLIKLTHIQIHLNEG
Ga0208951_11860452	3300027621	Freshwater Lentic	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKGELENCLVELSHIVHHED
Ga0209356_10714553	3300027644	Freshwater Lake	MSIDANSVIIVIVASILSGIGTALVNGIKESKREKIRQSEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIAMH
Ga0209599_1000195110	3300027710	Deep Subsurface	MTLDSNSVIIVILAALLSGMGTAMINGIRESKKEKIRRTEREQDMLKMELKDLKIELYKLEKDLIEWRDKYYEAVQELIEVKGELENCLVELSHIVHHED
Ga0209599_100164803	3300027710	Deep Subsurface	MTLDSNSIIIVIAASILSGMGTAFVNVIRESKKEKNRRAEREQDMLKMELKDLEIKLYKLERDLIEWRDKYYAAVQELIEVKAELEDTLIKLNHIILHD
Ga0209617_101444312	3300027720	Freshwater And Sediment	PLTSGIGTALVNGIKESKREKIRQSEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIAMHE
Ga0209087_10317759	3300027734	Freshwater Lake	MTLDANSVIIVIVASILSGMGTALVAEIKESKREKIRQTEREQDMLKMELKDLEIKLYKLEKDLTEWRDKYYEAIQELIEVKAELEDTLIKLTHIVMHE
Ga0209189_10461369	3300027747	Freshwater Lake	MSIDANSVIIVIVASILSGMGTAMINGIKESKKEKIRQSEREQDMLKMELKDLEIKLYKLEKDLVEWRDKYYAAVQELIEVKSELENCLIELNHIVHHED
Ga0209596_100165722	3300027754	Freshwater Lake	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYAAVQELIEVKSELENCLIELSHIVHHED
Ga0209596_10030816	3300027754	Freshwater Lake	MSIDANSVIIVIAASILSGIGTALVNGIKESKREKIRQSEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIAMH
Ga0209596_10062939	3300027754	Freshwater Lake	MIIDANSVIIVIIASILSGMGTALVSGIKESKREKIRQSEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIAMHE
Ga0209296_10197859	3300027759	Freshwater Lake	MSMDANSVIIVIIASVLSGIGTAMFNGIKESKRERNRKIEREQDMLKMELKDLEIKLYKLEKDLDEWRNKYYQALQELIEVKGELENCLVELSHIAHHED
Ga0209296_10352317	3300027759	Freshwater Lake	MSIDANSIVIVIVASILSGMGTAMINGIKESRKEKIRQSEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYQALKELIEIKAELEDTLIKLTHIGMHE
Ga0209296_11364125	3300027759	Freshwater Lake	MTLDANSVIIVIIASILSGMGTALVSGFKESKREKIRRTEREQDMLKMELKDLEIKLYKLEKDLIEWRDKYYQAVQELIEVKAELEDTL
Ga0209088_101755504	3300027763	Freshwater Lake	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKGELENCL
Ga0209770_100727605	3300027769	Freshwater Lake	MTLDSNSVIIVIVASILSGMGTALVKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLTEWRDRYYEALQELIEVKAELEDTLIKLNHIVLH
Ga0209086_101966602	3300027770	Freshwater Lake	MTLDSNSIIIVIVASILSGMGTALVKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLTEWRDKYYQALQELIEVKAELEDTLIKLNHIVMHE
Ga0209500_101593601	3300027782	Freshwater Lake	MTLDANSVIIVIIASILSGMGTALVSGLKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKGELENCLVELSHIVHHED
Ga0209500_101939351	3300027782	Freshwater Lake	MTLDANSVIIVIIASILSGMGTALVSGLKESKREKIRRTEREQEMLKMELKDLEIKLYKLEKDLVEWRDKYYAAVQELIEVKAELEDTLIKLNHIILHD
Ga0209107_1000014341	3300027797	Freshwater And Sediment	MSIDANSVIIVIAASILSGIGTALVNGIKESKREKIRQSEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIAMHE
Ga0209107_100150919	3300027797	Freshwater And Sediment	MALDSNSVIIVIVASILSGMGTALIKEIKESKKEKIRRAERDQDMLKMDLKDLEIKLYKLEKDLAEWRDKYYDALQELIEVKAELEDTLIKLTHIGLHD
Ga0209358_100888011	3300027804	Freshwater Lake	MTLDSNSVIIVIVASILSGMGTALVKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLTEWRDRYYEALQELIEVKAELEDTLIKLNHIVMHE
Ga0209400_11812112	3300027963	Freshwater Lake	MSMDANSVIIVIIASVLSGIGTAMFNSIKESRRERNRKIEREQDMLKMELKDLEIKLYKLEKDLDEWRNKYYQALQELIEVKGELENCLVELSHIAHHED
Ga0209191_12723982	3300027969	Freshwater Lake	MSIDANSVIIVIVASILSGMGTAMINGIKESKREKNRQIEREQDMLKMELKDLEIKLYKLEKDLVEWRDKYYAAVQELIEVKSELENCLIELSHIAHHED
Ga0247723_100759212	3300028025	Deep Subsurface Sediment	MTLDSNSIIIVIAASILSGMGTAFVNGIRESKKEKNRRAEREQDMLKMELKDLEIKLYKLERDLIEWRDKYYAAVQELIEVKAELEDTLIKLNHIILHD
Ga0247723_10591682	3300028025	Deep Subsurface Sediment	MTLDSNSVIIVIVASILSGMGTALIKEIKESKREKIRRAEREQDMLKMELKDLEIKLYKLEKDLAEWRDKYYEALQELIEVKAELEDTLIKLTHIVMHE
Ga0335019_0007243_4834_5142	3300034066	Freshwater	MKVSAFQIGITILISILSGFGTALFNSIKEKKREAVRRQEKIQSDLKLELKDLEIKLYQLEKDLHEWKSKYYEAIQELIEVKAELENTLIKLSHIEIHLKED
Ga0335019_0043378_2608_2916	3300034066	Freshwater	MEVSAFQIGITILISILSGFGTALFNSIKEKKREAFRRQEKIQSDLKLELKDLEIKLYQLEKDLHEWKNKYYEAIQELIEVKAELENTLIKLSHIEIHLKKD
Ga0334990_0216339_342_641	3300034068	Freshwater	MTLDANSVIIVIAASILSGMGTALVAEIKESKREKIRQAEREQDMLRMELKDLEIKLYKLERDLIEWRDKYYAAVQELIEVKAELEDTLIKLNHIVLHD
Ga0335020_0006133_5061_5360	3300034082	Freshwater	MTLDANSITIVILASILSGMGTALVNGIKESKKEKARRTEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYNALQELIEVKAELEDTLIKLTHIGLHD
Ga0335020_0104711_227_526	3300034082	Freshwater	MTLDSNSIIIVIAASILSGVGTAFVNGIRESKKEKNRRAEREQDMLKMELKDLEIKLYKLERDLIEWRDKYYAAVQELIEVKAELEDTLIKLNHIILHD
Ga0335012_0167435_2_244	3300034093	Freshwater	MGTALVNGIKESKKEKARRTEREQDLLKMDLKDLEIKLYKLEKDLAEWRDKYYNALQELIEVKAELEDTLIKLTHIGLHD
Ga0335055_0011756_3768_4076	3300034110	Freshwater	MNVSTSQIILAILASILSGFGTALYGSIREKRKEKFRAQEKVQIDLKLELKDLEIKLYQLEKDLHEWKSKYYEAIQELIAVKAELEDTLIKLTHIQIHLNEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077310

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences