Metagenome / Metatranscriptome Family F077433

Basic Information
Family ID	F077433
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	113 residues
Representative Sequence	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIIVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Number of Associated Samples	98
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.43 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	81.20 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (63.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.658 % of family members)
Environment Ontology (ENVO)	Unclassified (46.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.556 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 18.10% β-sheet: 44.83% Coil/Unstructured: 37.07%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF02518	HATPase_c	31.62
PF07366	SnoaL	5.98
PF00486	Trans_reg_C	2.56
PF06057	VirJ	2.56
PF05694	SBP56	2.56
PF00535	Glycos_transf_2	0.85
PF09924	LPG_synthase_C	0.85
PF02770	Acyl-CoA_dh_M	0.85
PF02743	dCache_1	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3946	Type IV secretory pathway, VirJ component	Intracellular trafficking, secretion, and vesicular transport [U]	2.56
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.85
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.25 %
Unclassified	root	N/A	36.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.25 %
Unclassified	root	N/A	36.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.25 %
Unclassified	root	N/A	36.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	24.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.55 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.55 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.42 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.55 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.55 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.55 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.42 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.55 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	3.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.42 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.85 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.55 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	3.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.42 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.85 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.55 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	3.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.42 %
Variovorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	0.85 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2361285	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2362860	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14473578	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300000550\|F24TB_12272299	Not Available	938	Open in IMG/M
3300000956\|JGI10216J12902_107742331	All Organisms → cellular organisms → Bacteria	2437	Open in IMG/M
3300004114\|Ga0062593_100631695	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1029	Open in IMG/M
3300004463\|Ga0063356_104544601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	597	Open in IMG/M
3300004480\|Ga0062592_102358266	Not Available	533	Open in IMG/M
3300004643\|Ga0062591_101688399	Not Available	642	Open in IMG/M
3300004799\|Ga0058863_11088496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	588	Open in IMG/M
3300004800\|Ga0058861_11354121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	512	Open in IMG/M
3300004801\|Ga0058860_11949466	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	564	Open in IMG/M
3300004801\|Ga0058860_11994345	Not Available	505	Open in IMG/M
3300005290\|Ga0065712_10001514	All Organisms → cellular organisms → Bacteria	6242	Open in IMG/M
3300005333\|Ga0070677_10650557	Not Available	589	Open in IMG/M
3300005334\|Ga0068869_100172698	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300005338\|Ga0068868_100791834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300005340\|Ga0070689_101995509	Not Available	530	Open in IMG/M
3300005344\|Ga0070661_101198311	Not Available	635	Open in IMG/M
3300005367\|Ga0070667_100039919	All Organisms → cellular organisms → Bacteria	3934	Open in IMG/M
3300005457\|Ga0070662_100780584	Not Available	811	Open in IMG/M
3300005564\|Ga0070664_100423088	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300005577\|Ga0068857_100519793	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1119	Open in IMG/M
3300005577\|Ga0068857_100658235	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300005618\|Ga0068864_100245611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1660	Open in IMG/M
3300005718\|Ga0068866_10291816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1015	Open in IMG/M
3300005840\|Ga0068870_10123193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1496	Open in IMG/M
3300005844\|Ga0068862_102283646	Not Available	553	Open in IMG/M
3300006237\|Ga0097621_100165624	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300006845\|Ga0075421_100803927	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300006881\|Ga0068865_100247019	All Organisms → cellular organisms → Bacteria → Acidobacteria	1407	Open in IMG/M
3300009094\|Ga0111539_10376748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1652	Open in IMG/M
3300009094\|Ga0111539_12311231	Not Available	624	Open in IMG/M
3300009100\|Ga0075418_10697655	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300009156\|Ga0111538_11521675	Not Available	843	Open in IMG/M
3300009156\|Ga0111538_11630713	Not Available	813	Open in IMG/M
3300009176\|Ga0105242_13140275	Not Available	512	Open in IMG/M
3300009177\|Ga0105248_10319620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1748	Open in IMG/M
3300009553\|Ga0105249_12184644	Not Available	626	Open in IMG/M
3300009610\|Ga0105340_1063588	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300009678\|Ga0105252_10073476	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300010110\|Ga0126316_1110492	Not Available	597	Open in IMG/M
3300010154\|Ga0127503_10217331	Not Available	513	Open in IMG/M
3300010403\|Ga0134123_11580755	Not Available	703	Open in IMG/M
3300011119\|Ga0105246_11463077	Not Available	640	Open in IMG/M
3300011435\|Ga0137426_1139725	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300012891\|Ga0157305_10072878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300012899\|Ga0157299_10061244	Not Available	875	Open in IMG/M
3300012902\|Ga0157291_10040666	Not Available	1054	Open in IMG/M
3300012904\|Ga0157282_10157734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	698	Open in IMG/M
3300012908\|Ga0157286_10002886	All Organisms → cellular organisms → Bacteria	2822	Open in IMG/M
3300012911\|Ga0157301_10000659	All Organisms → cellular organisms → Bacteria	5138	Open in IMG/M
3300012912\|Ga0157306_10087152	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300013306\|Ga0163162_13296669	Not Available	517	Open in IMG/M
3300013308\|Ga0157375_10316984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1724	Open in IMG/M
3300013308\|Ga0157375_12526401	Not Available	613	Open in IMG/M
3300014325\|Ga0163163_10108451	All Organisms → cellular organisms → Bacteria	2804	Open in IMG/M
3300014326\|Ga0157380_10003540	All Organisms → cellular organisms → Bacteria → Acidobacteria	10740	Open in IMG/M
3300014326\|Ga0157380_11527369	Not Available	721	Open in IMG/M
3300014326\|Ga0157380_12368147	Not Available	596	Open in IMG/M
3300014969\|Ga0157376_11253197	Not Available	771	Open in IMG/M
3300015200\|Ga0173480_10022325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2656	Open in IMG/M
3300015371\|Ga0132258_13597237	Not Available	1060	Open in IMG/M
3300015373\|Ga0132257_102333793	Not Available	694	Open in IMG/M
3300015374\|Ga0132255_100930608	Not Available	1301	Open in IMG/M
3300017965\|Ga0190266_10082263	Not Available	1264	Open in IMG/M
3300018081\|Ga0184625_10086562	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300018083\|Ga0184628_10024134	All Organisms → cellular organisms → Bacteria	3009	Open in IMG/M
3300018469\|Ga0190270_10087871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2333	Open in IMG/M
3300018469\|Ga0190270_10274394	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300018476\|Ga0190274_10266736	Not Available	1566	Open in IMG/M
3300018476\|Ga0190274_10733899	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300019356\|Ga0173481_10012553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2429	Open in IMG/M
3300019361\|Ga0173482_10016457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2023	Open in IMG/M
3300021082\|Ga0210380_10586204	Not Available	511	Open in IMG/M
3300022889\|Ga0247785_1056534	Not Available	504	Open in IMG/M
3300025315\|Ga0207697_10446648	Not Available	573	Open in IMG/M
3300025893\|Ga0207682_10012149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3363	Open in IMG/M
3300025893\|Ga0207682_10223229	Not Available	872	Open in IMG/M
3300025901\|Ga0207688_10439003	Not Available	813	Open in IMG/M
3300025901\|Ga0207688_11078964	Not Available	507	Open in IMG/M
3300025907\|Ga0207645_10849139	Not Available	621	Open in IMG/M
3300025908\|Ga0207643_10017881	All Organisms → cellular organisms → Bacteria	3882	Open in IMG/M
3300025925\|Ga0207650_10077831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2508	Open in IMG/M
3300025938\|Ga0207704_11086620	Not Available	679	Open in IMG/M
3300025942\|Ga0207689_10080934	All Organisms → cellular organisms → Bacteria	2670	Open in IMG/M
3300025945\|Ga0207679_10555028	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300025972\|Ga0207668_10493981	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300025986\|Ga0207658_10449948	Not Available	1140	Open in IMG/M
3300026089\|Ga0207648_10019308	All Organisms → cellular organisms → Bacteria → Acidobacteria	6151	Open in IMG/M
3300026116\|Ga0207674_10376522	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1372	Open in IMG/M
3300027573\|Ga0208454_1082037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300027909\|Ga0209382_11421431	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300028381\|Ga0268264_11715592	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300028589\|Ga0247818_11336598	Not Available	515	Open in IMG/M
3300028812\|Ga0247825_10004722	All Organisms → cellular organisms → Bacteria	8950	Open in IMG/M
3300028812\|Ga0247825_10419571	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300031184\|Ga0307499_10019636	All Organisms → cellular organisms → Bacteria → Acidobacteria	1441	Open in IMG/M
3300031184\|Ga0307499_10096865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300031226\|Ga0307497_10017050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2173	Open in IMG/M
3300031547\|Ga0310887_10116999	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300031740\|Ga0307468_100045329	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300031740\|Ga0307468_100305873	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300031858\|Ga0310892_11389968	Not Available	504	Open in IMG/M
3300031940\|Ga0310901_10400394	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300032003\|Ga0310897_10173214	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300032012\|Ga0310902_10725452	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300032017\|Ga0310899_10165716	Not Available	955	Open in IMG/M
3300032075\|Ga0310890_10224274	All Organisms → cellular organisms → Bacteria → Acidobacteria	1305	Open in IMG/M
3300032075\|Ga0310890_10885564	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300032144\|Ga0315910_10193468	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300032144\|Ga0315910_10502021	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300032157\|Ga0315912_10002172	All Organisms → cellular organisms → Bacteria	21573	Open in IMG/M
3300032157\|Ga0315912_10012291	All Organisms → cellular organisms → Bacteria → Acidobacteria	7233	Open in IMG/M
3300032157\|Ga0315912_10435155	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300032179\|Ga0310889_10391402	Not Available	688	Open in IMG/M
3300034148\|Ga0364927_0078474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.43%
Environmental	Environmental	49.57%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	47.01%
Terrestrial	Environmental → Terrestrial	41.88%
Aquatic	Environmental → Aquatic	7.69%
Human	Host-Associated → Human	3.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.51%
Sediment	Environmental → Aquatic → Sediment	5.13%
Digestive System	Host-Associated → Human → Digestive System	3.42%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Roots	Host-Associated → Plants → Roots	1.71%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.13%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.42%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.71%
Loam	Environmental → Terrestrial → Soil → Loam	1.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.71%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.53%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.98%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.56%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010110	Soil microbial communities from Illinois, USA to study soil gas exchange rates - BV-IL-AGR metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23612852	3300000033	Soil	LASGTARAANLEVNVPFSFMVNHEAFPAGRYQIEEDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHRENQYRLENIWESPTEGQSIIQHK*
ICChiseqgaiiDRAFT_23628602	3300000033	Soil	MRSVMLKTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLXNIWESPTEGQSIIDHK*
ICChiseqgaiiFebDRAFT_144735782	3300000363	Soil	LLASGTARAANLEVNVPFSFMVNHEAFPAGRYQIEEDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHRENQYRLENIWESPTEGQSIIQHK*
F24TB_122722991	3300000550	Soil	MRSVILKWAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIIVTHEAGGQGPSKPALQFEHRENQYRLSXXXXSPTEGQTIIEHK*
JGI10216J12902_1077423312	3300000956	Soil	MRSVMLKTAMLGAAFLLASGTARAAEVLEVNVPFPFVVNHETFPAGRYQLEQDTLAGPAIMIIRGMHTPQAAIFVTHEAAGQGPRKPALQFEHRENQYRLQNIWESPTEGQNIIEHK*
Ga0062593_1006316952	3300004114	Soil	MRSVMLKTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK*
Ga0063356_1045446011	3300004463	Arabidopsis Thaliana Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHREDQYRLSNIWESPTEGQTIIEHK*
Ga0062592_1023582661	3300004480	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFERRENQYRLSNIWESPTEGQTIIEHK*
Ga0062591_1016883991	3300004643	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSTPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0058863_110884961	3300004799	Host-Associated	RIPNPEPGSRVPVMEVIMRSVMLKTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK*
Ga0058861_113541211	3300004800	Host-Associated	EFRIPNPEPGSRVPVMEVIMRSVMLKTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK*
Ga0058860_119494661	3300004801	Host-Associated	IMRSVMLKTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK*
Ga0058860_119943451	3300004801	Host-Associated	MRSVMFKTAMLGAAFLLAAGTARAESLEVNVPFPFIVNHESFPAGRYQIEEDALAGPTVWTIRGMNTSQAAIIVTREAGGRGPSKPALQFEHRENQYRLQNIWESPTEGQSIIQHK*
Ga0065712_100015141	3300005290	Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIXQXSLXGPTVWTIRGMNTSQTAIFVTHEAGGQGPSTPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0070677_106505571	3300005333	Miscanthus Rhizosphere	MRSVMFKTAMLGAAFLLAAGTARAESLEVNVPFPFIVNHESFPAGRYQIEEDALAGPTVWTIRGMNTSQAAIIVTREAGGRGPSKPALQFEHRENQYRLQNIWESPTEGQ
Ga0068869_1001726982	3300005334	Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQ
Ga0068868_1007918342	3300005338	Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFERRENQYRLSNIWESPTEGQT
Ga0070689_1019955091	3300005340	Switchgrass Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSTPALQFEHRENQYRLSNIWESPTEGQTIVIHK*
Ga0070661_1011983111	3300005344	Corn Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK*
Ga0070667_1000399193	3300005367	Switchgrass Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK*
Ga0070662_1007805842	3300005457	Corn Rhizosphere	AFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQVEQDSLAGPTVWTIRGMNTSQTAIIVTHEASGHGPSKPALQFAHRENQYRLSNIWESPTEGQTIIEHK*
Ga0070664_1004230881	3300005564	Corn Rhizosphere	MLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK*
Ga0068857_1005197932	3300005577	Corn Rhizosphere	GTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK*
Ga0068857_1006582352	3300005577	Corn Rhizosphere	MRSVMLKTAMLGAAFLLAAGTARAASLEVNVPFPFIVNHETFPAGRYQLEQDVLAGPSVMIIRGMHTPQAAIVATHEAAGHGPSKPALQFEHRENQYRLENIWESPTEGQSIIQHK*
Ga0068864_1002456112	3300005618	Switchgrass Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSRPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0068866_102918162	3300005718	Miscanthus Rhizosphere	GAAAFLFASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK*
Ga0068870_101231931	3300005840	Miscanthus Rhizosphere	PNPGSRVPDPGPLDPESRFMEVIMRSVMFKTAMLGAAFLLAAGTARAESLEVNVPFPFIVNHESFPAGRYQIEEDALAGPTVWTIRGMNTSQAAIIVTREAGGRGPSKPALQFEHRENQYRLQNIWESPTEGQSIIDHK*
Ga0068862_1022836461	3300005844	Switchgrass Rhizosphere	SAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK*
Ga0097621_1001656242	3300006237	Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLSGPTVWTIRGMNTSQTAIFVTHEAGGQGPSTPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0075421_1008039272	3300006845	Populus Rhizosphere	MRSVMLKTAMLGAAFLLASGTARAAVLEVDVPFPFVVNHETFPAGRYQLEQDVLAGPSVMIIRGMHTPQAAIIATHEAGGQGPSKPALQFEHRENQYRLQNIWESPTEGQSIIQHK*
Ga0068865_1002470192	3300006881	Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK*
Ga0111539_103767482	3300009094	Populus Rhizosphere	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSRPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0111539_123112311	3300009094	Populus Rhizosphere	AANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFKHSSENQYRLSNIWESPTEGQTIIEHK*
Ga0075418_106976552	3300009100	Populus Rhizosphere	MLKTAMLGAAFLLASGTARAAVLEVDVPFPFVVNHETFPAGRYQLEQDVLAGPSVMIIRGMHTPQAAIIATHEAGGQGPSKPALQFEHRENQYRLQNIWESPTEGQSIIQHK*
Ga0111538_115216751	3300009156	Populus Rhizosphere	WRFIMRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSTPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Ga0111538_116307132	3300009156	Populus Rhizosphere	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQVEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFKHSSENQYRLSNIWESPTEGQTIIEHK*
Ga0105242_131402751	3300009176	Miscanthus Rhizosphere	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK*
Ga0105248_103196203	3300009177	Switchgrass Rhizosphere	MLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSRPALQFEHREKQYQLSNIWESPTEGQTIIEHK*
Ga0105249_121846441	3300009553	Switchgrass Rhizosphere	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0105340_10635882	3300009610	Soil	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIIVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0105252_100734762	3300009678	Soil	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIIVTHEAGGQGPSKPALQFEHHENQYRLSNIWESPTEGQTIIEHSKSLRRPQHGVRISLC*
Ga0126316_11104921	3300010110	Soil	MEVIMRSVMLKTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK*
Ga0127503_102173311	3300010154	Soil	MLKTAMLGAAFLLASGTARAAEVLEVNVPFPFIVNHETFPAGRYQLEEDTLAGPTVMIMRGMHTPQAAILVTHEAAGHGPRKPALQFEHRENQYRLQNIWESPTEGQSIIDHK*
Ga0134123_115807551	3300010403	Terrestrial Soil	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK*
Ga0105246_114630771	3300011119	Miscanthus Rhizosphere	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK*
Ga0137426_11397252	3300011435	Soil	MLKSAMLGAAFLLASGTARAGNLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0157305_100728782	3300012891	Soil	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQVEQDSLAGPTVWTIRGMNTSQTAIIVTHEADGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0157299_100612441	3300012899	Soil	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDWLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSRPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0157291_100406662	3300012902	Soil	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWAIRGMNTSQTAIFVTHEAGGQGPSQPALQFERRENQYRLSNIWESPTEGQTIIEHK*
Ga0157282_101577342	3300012904	Soil	LGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFERRENQYRLSNIWESPTEGQTIIEHK*
Ga0157286_100028861	3300012908	Soil	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFERRENQYRLSNIWESPTEGQTIIEHK*
Ga0157301_100006596	3300012911	Soil	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSTPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0157306_100871522	3300012912	Soil	MEVIMRSVMLKTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQ
Ga0163162_132966691	3300013306	Switchgrass Rhizosphere	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFERRENQYRLSNIWESPTEGQSIIDHK*
Ga0157375_103169842	3300013308	Miscanthus Rhizosphere	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLSGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFERRENQYRLSNIWESPTEGQTIIEHK*
Ga0157375_125264012	3300013308	Miscanthus Rhizosphere	MLKTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDH
Ga0163163_101084513	3300014325	Switchgrass Rhizosphere	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFERRENQYRLSNIWESPTEGQTIIEHK*
Ga0157380_100035407	3300014326	Switchgrass Rhizosphere	MEVIMRSVMFKTAMLGAAFLLAAGTARAESLEVNVPFPFIVNHESFPAGRYQIEEDALAGPTVWTIRGMNTSQAAIIVTREAGGRGPSKPALQFEHRENQYRLQNIWESPTEGQSIIQHK
Ga0157380_115273692	3300014326	Switchgrass Rhizosphere	MLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFERRENQYRLSNIWESPTEGQTIIEHK*
Ga0157380_123681472	3300014326	Switchgrass Rhizosphere	MLKTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSII
Ga0157376_112531971	3300014969	Miscanthus Rhizosphere	AANLEVNVPFSFIVNHETFPAGRYQIEQDSLSGPTVWTIRGMNTSQTAIFVTHEAGGQGPSRPALQFEHRENQYQLSNIWESPTEGQTIIEHK*
Ga0173480_100223251	3300015200	Soil	MLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIIVTHEADGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0132258_135972372	3300015371	Arabidopsis Rhizosphere	FIMRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSRPALQFEHRENQYRLSNIWESPTEGQTIIEHK*
Ga0132257_1023337931	3300015373	Arabidopsis Rhizosphere	AMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK*
Ga0132255_1009306082	3300015374	Arabidopsis Rhizosphere	MEVIMRSVMFKTAMLGAAFLLAAGTARAESLEVNVPFPFIVNHESFPAGRYQIEEDALAGPTVWTIRGMNTSQAAIIVTHEAGGRGPSKPALQFEHRENQYRLQNIWESPTEGQSIIQHK
Ga0190266_100822632	3300017965	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEEDSLAGPTIWTIRGMNTSQTAIIVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Ga0184625_100865622	3300018081	Groundwater Sediment	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFEHRENQYRLQNIWESPTEGQSIIDHK
Ga0184628_100241343	3300018083	Groundwater Sediment	MRSVMLKTAMLGAAAFLLASGSARAANLEVNVPFSFTVNHETFPAGRYQIEEDSLAGPTVWTIRGMNTSQAAIIVTHEAAGRGPAKPALQFERRENQYRLSNIWESPTEGQTIVIHK
Ga0190270_100878713	3300018469	Soil	MRSVMLKSAIVGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEEDSLAGPTIWTIRGMNTSQTAIIVTHEAGGQGPSKPALQFEHHENQYRLSNIWESPTEGQTIIEHK
Ga0190270_102743942	3300018469	Soil	MRSVMLKTAMLGAAAFLLASGSARAANLEVNVPFSFTVNHETFPAGRYQIEEDSLAGPTVWTIRGMNTSQAAIIVTHEAAGRGPARPALQFERRENQYRLSNIWESPTEGQTIVIHK
Ga0190274_102667361	3300018476	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSRPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Ga0190274_107338992	3300018476	Soil	MRSVMLKTAMLGAAFLLAAGTARAASLEVNVPFPFIVNHETFPAGRYQLEQDVLAGPSVMIIRGMHTPQAAIIATHEAAGHGPSKPALQFEHRENQYRLENIWESPTEGQSIIQHK
Ga0173481_100125532	3300019356	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIIVTHEADGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Ga0173482_100164573	3300019361	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSTPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Ga0210380_105862041	3300021082	Groundwater Sediment	MRSVVLKSAMVGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAAGRGPAKPALQFERRENQYRLSNIWESPTEGQTIVIHK
Ga0247785_10565341	3300022889	Soil	LASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK
Ga0207697_104466481	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLSGPTVWTIRGMNTSQTAIFVTHEAGGQGPSTPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Ga0207682_100121493	3300025893	Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK
Ga0207682_102232291	3300025893	Miscanthus Rhizosphere	MRSVMFKTAMLGAAFLLAAGTARAESLEVNVPFPFIVNHESFPAGRYQIEEDALAGPTVWTIRGMNTSQAAIIVTREAGGRGPSKPALQFEHRENQYRLQNIWESPTEGQSIIQHK
Ga0207688_104390031	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFERRENQYRLSNIWESPTEGQTIIEHK
Ga0207688_110789641	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	RAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK
Ga0207645_108491391	3300025907	Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Ga0207643_100178812	3300025908	Miscanthus Rhizosphere	MRSVMLKTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK
Ga0207650_100778313	3300025925	Switchgrass Rhizosphere	KTAMLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK
Ga0207704_110866201	3300025938	Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAAGRGPAKPALQFEHRENQYRLSNIWESPTEGQTIVIHK
Ga0207689_100809343	3300025942	Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSRPALQFEHRENQYRLENIWESPTEGQSIIQHK
Ga0207679_105550281	3300025945	Corn Rhizosphere	MLGAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK
Ga0207668_104939811	3300025972	Switchgrass Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK
Ga0207658_104499481	3300025986	Switchgrass Rhizosphere	LASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK
Ga0207648_100193083	3300026089	Miscanthus Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHRENQFRLSNIWESPTEGQTIIERK
Ga0207674_103765222	3300026116	Corn Rhizosphere	MRSVMLKTAMLGAAFLLAAGTARAASLEVNVPFPFIVNHETFPAGRYQLEQDVLAGPSVMIIRGMHTPQAAIVATHEAAGHGPSKPALQFEHRENQFRLSNIWESPTEGQTIIEHK
Ga0208454_10820372	3300027573	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIIVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Ga0209382_114214312	3300027909	Populus Rhizosphere	GTARAAVLEVDVPFPFVVNHETFPAGRYQLEQDVLAGPSVMIIRGMHTPQAAIIATHEAGGQGPSKPALQFEHRENQYRLQNIWESPTEGQSIIQHK
Ga0268264_117155921	3300028381	Switchgrass Rhizosphere	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQSAIIVTREAGGQGPSKPALQFEHREN
Ga0247818_113365981	3300028589	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGEGPSKPALQFEHREDQYRLSNIWESPTEGQTIIEHK
Ga0247825_100047226	3300028812	Soil	MRSVMLKSAMLGAAFLLASGTARAGNLEVNVPFSFIVNHETFPAGRYQFEQDALAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Ga0247825_104195712	3300028812	Soil	MRSVVLKSAMVGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIIVTHEAGGQGPSKPALQFEHHENQYRLSNIWESPTEGQTIIEHK
Ga0307499_100196362	3300031184	Soil	MRSVMLKTAMLGAAAFLLASGTARAAVLEVNVPFSFTVNHETFPAGRYQLEEDSLAGPTVWTIRGMHTPQAAIIVTREADGRGPDKPALQFQHRENQYRLSNIWESSTEGQSIV
Ga0307499_100968652	3300031184	Soil	MRSAMLKTAMLGAAFLLAAGTARAASLEVNVPFPFIVNHETFPAGRYQLEQDVLAGPSVMIIRGMHTPQVAIVATHEAAGHGPSKPALQFEHRENQYRLENIWESPTEGQSIIQHK
Ga0307497_100170503	3300031226	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQVEQDSLAGPTVWTIRGMNTSQTAIIVTHEAGGQGPSKPALQFKHSENQYRLSNIWESPTEGQTIIEHK
Ga0310887_101169991	3300031547	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIVEHK
Ga0307468_1000453292	3300031740	Hardwood Forest Soil	MRSVMLKTAMLGAAAFLLTSGTARAANLEVNVPFSFTVNHETFPAGRYQIEEDSLAGPTVWTIRGMNTSQAAIIVTHEAAGRGPAKPALQFEHRENQYRLSNIWESPTEGQTIVIHK
Ga0307468_1003058732	3300031740	Hardwood Forest Soil	MRSAMLKTAMLGAAFLLASGTARAASLEVNVPFPFIVNHETFPAGRYQLEQDVLAGPSVMIIRGMHTPQVAIVATHEAAGHGPSKPALQFEHRENQYRLENIWESPTEGQSIIQHK
Ga0310892_113899681	3300031858	Soil	MRSVMFKTAMLGAAFLLAAGTARAESLEVNVPFPFIVNHESFPAGRYQIEEDALAGPTVWTIRGMNTSQAAIIVTREAGGRGPSKPALQFEHRENQYRLQNIWESP
Ga0310901_104003942	3300031940	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIFVTHEAGGQGPSKPALQFERRENQYR
Ga0310897_101732142	3300032003	Soil	AANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIVEHK
Ga0310902_107254522	3300032012	Soil	GAAFLLASGTARAAEVLEVNVPFPFTVNHETFPAGRYQLEQDTLAGPSVMILRGMHTPQAAIIATHEAGGQGPRKPALQFERRDNQYRLQNIWESPTEGQSIIDHK
Ga0310899_101657161	3300032017	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVHVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHRENQYRLSNIWESPTEGQTIIEHK
Ga0310890_102242742	3300032075	Soil	MRSVMLKSAMLGAAFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQIEQDSLAGPTVWTIRGMNTSQTAIIVTHEAGGQGPSKPALQFEHHENQYRLSNIWESP
Ga0310890_108855641	3300032075	Soil	VIMRSVMFKTAMLGAAFLLAAGTARAESLEVNVPFPFIVNHETFPAGRYQLEQDVLAGPSVMIIRGMHTPQAAIVATHEAAGHGPSKPALQFEHRENQYRLENIWESPTEGQSIIQHK
Ga0315910_101934682	3300032144	Soil	MRSVMLKTAMLGAATFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQLEEDSLAGPTVWTIRGMNTSQAAIIVTREADGRGPSKPALQFQHRENQYRLSRIWESSTEGQSIVEHK
Ga0315910_105020212	3300032144	Soil	MRSVMLKTAMLGAAFLLAAGTARAAGVLEVNVPFPFVVNHETFPAGRYQLEQDTLAGPSVMIIRGMHTPQAAIIATHEAAGQGPRQPALQFEHRENQYRLQNIWESPTEGQNIIERK
Ga0315912_1000217216	3300032157	Soil	MRSVMLKTAMLGAAAFLLASGTARAAALDVNVPFPFTVNHETFPAGRYQLEQDQIAGPSVWTIRGMNTPQAAIIVTHEAGGRGPSKPALQFQHRENQYRLSNIWESPTEGQTIVEHK
Ga0315912_100122917	3300032157	Soil	MRSVMLKTAMLGAAVLLVSGTARAAEILEVNVPFPFVVNHETFPAGKYQLEQDVLAGPSVMIIRGMNTSHSAIVATHEAGGQGPRQPALQFEHKENQYRLQNIWESPTEGQSIIQHK
Ga0315912_104351551	3300032157	Soil	RIPKSRIPSLGPGSGSMEVIMRSVMLKTAMLGAATFLLASGTARAANLEVNVPFSFIVNHETFPAGRYQLEEDSLAGPTVWTIRGMNTSQAAIIVTREADGRGPSKPALQFQHRENQYRLSRIWESSTEGQSIVEHK
Ga0310889_103914022	3300032179	Soil	MRSVMLKSAMLGAAFLLASGTARAGNLEVNVPFSFIVNHEAFPAGRYQIEQDSLAGPTVWTIRGMNTSQAAIIVTHEAGGQGPSKPALQFEHREDQYRLSNIWESPTEGQTIIEHK
Ga0364927_0078474_490_831	3300034148	Sediment	MLKTAMLGAAAFLLASGSARAANLEVNVPFSFTVNHETFPAGRYQIEEDSLAGPTVWTIRGMNTSQAAIIVTHEAAGRGPAKPALQFERRENQYRLSNIWESPTEGQTIVIHK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077433

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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