NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F077458

Metagenome / Metatranscriptome Family F077458

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077458
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 85 residues
Representative Sequence MADEHEDGPIDAQEVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH
Number of Associated Samples 98
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 76.07 %
% of genes near scaffold ends (potentially truncated) 33.33 %
% of genes from short scaffolds (< 2000 bps) 81.20 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.291 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(8.547 % of family members)
Environment Ontology (ENVO) Unclassified
(29.915 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(25.641 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.21%    β-sheet: 0.00%    Coil/Unstructured: 47.79%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF02769AIRS_C 2.56
PF02754CCG 2.56
PF00586AIRS 1.71
PF01061ABC2_membrane 1.71
PF00581Rhodanese 1.71
PF01202SKI 0.85
PF01638HxlR 0.85
PF01424R3H 0.85
PF01207Dus 0.85
PF00004AAA 0.85
PF00535Glycos_transf_2 0.85
PF12705PDDEXK_1 0.85
PF06762LMF1 0.85
PF04257Exonuc_V_gamma 0.85
PF00216Bac_DNA_binding 0.85
PF00574CLP_protease 0.85
PF00378ECH_1 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG0247Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcFEnergy production and conversion [C] 2.56
COG2048Heterodisulfide reductase, subunit BEnergy production and conversion [C] 2.56
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.71
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 1.71
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 0.85
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 0.85
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 0.85
COG1330Scaffold subunit RecC of the DNA repair enzyme RecBCD (exonuclease V)Replication, recombination and repair [L] 0.85
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.85
COG1847Predicted RNA-binding protein Jag (SpoIIIJ-associated), conains KH and R3H domainsGeneral function prediction only [R] 0.85

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.29 %
UnclassifiedrootN/A1.71 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_104987889All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105707594All Organisms → cellular organisms → Bacteria2041Open in IMG/M
3300000443|F12B_11743808All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300001213|JGIcombinedJ13530_107096783All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300002231|KVRMV2_100662749All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300003154|Ga0052186_10065114All Organisms → cellular organisms → Bacteria3789Open in IMG/M
3300003154|Ga0052186_10065126All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300003310|D1draft_1000598All Organisms → cellular organisms → Bacteria50272Open in IMG/M
3300003987|Ga0055471_10261420All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300003992|Ga0055470_10032449All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300004000|Ga0055458_10248902All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300004027|Ga0055459_10156978All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300004052|Ga0055490_10041715All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300004082|Ga0062384_100544628All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300004463|Ga0063356_101992239All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300004479|Ga0062595_102493507All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300005332|Ga0066388_100000429All Organisms → cellular organisms → Bacteria19515Open in IMG/M
3300005332|Ga0066388_100004079All Organisms → cellular organisms → Bacteria9738Open in IMG/M
3300005332|Ga0066388_100957459All Organisms → cellular organisms → Bacteria1426Open in IMG/M
3300005332|Ga0066388_104800437All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300005354|Ga0070675_100325497All Organisms → cellular organisms → Bacteria1358Open in IMG/M
3300005367|Ga0070667_100712776All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300005367|Ga0070667_101044325All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300005441|Ga0070700_101793893All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300005466|Ga0070685_11494921All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005468|Ga0070707_101340895All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300005536|Ga0070697_101889181All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005539|Ga0068853_102005626All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300005764|Ga0066903_101212646All Organisms → cellular organisms → Bacteria1402Open in IMG/M
3300005826|Ga0074477_1349824All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300005833|Ga0074472_10546314All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300005842|Ga0068858_100313557All Organisms → cellular organisms → Bacteria1498Open in IMG/M
3300005843|Ga0068860_100081065All Organisms → cellular organisms → Bacteria3086Open in IMG/M
3300005844|Ga0068862_101095814All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium791Open in IMG/M
3300005844|Ga0068862_102042282All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300006224|Ga0079037_100040489All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3551Open in IMG/M
3300006865|Ga0073934_10233161All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300007521|Ga0105044_10001560All Organisms → cellular organisms → Bacteria30761Open in IMG/M
3300007799|Ga0105049_10925352All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300009111|Ga0115026_10206990All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300009177|Ga0105248_11095371All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300009506|Ga0118657_10076055All Organisms → cellular organisms → Bacteria → Proteobacteria9290Open in IMG/M
3300009506|Ga0118657_12146357All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300009702|Ga0114931_10001865All Organisms → cellular organisms → Bacteria26832Open in IMG/M
3300009792|Ga0126374_10084909All Organisms → cellular organisms → Bacteria1745Open in IMG/M
3300009792|Ga0126374_10168113All Organisms → cellular organisms → Bacteria1351Open in IMG/M
3300009870|Ga0131092_10318842All Organisms → cellular organisms → Bacteria1501Open in IMG/M
3300009873|Ga0131077_11522149All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300010046|Ga0126384_10048273All Organisms → cellular organisms → Bacteria2923Open in IMG/M
3300010047|Ga0126382_10459245All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300010356|Ga0116237_10483952All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300010360|Ga0126372_10655113All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300010360|Ga0126372_12295622All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300010361|Ga0126378_11627812All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300010362|Ga0126377_10743112All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300010362|Ga0126377_12987940All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300010392|Ga0118731_113057934All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300010398|Ga0126383_12186582All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300010401|Ga0134121_12775128All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300012212|Ga0150985_113838698All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300013233|Ga0172420_10108525Not Available2125Open in IMG/M
3300013306|Ga0163162_11963468All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300013308|Ga0157375_13143968All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300014272|Ga0075327_1004660All Organisms → cellular organisms → Bacteria4233Open in IMG/M
3300014968|Ga0157379_11234288All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300016357|Ga0182032_11222391All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300017959|Ga0187779_10037410All Organisms → cellular organisms → Bacteria2807Open in IMG/M
3300017959|Ga0187779_10370188All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300019360|Ga0187894_10215121All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300019487|Ga0187893_10014175All Organisms → cellular organisms → Bacteria10928Open in IMG/M
3300020192|Ga0163147_10041517All Organisms → cellular organisms → Bacteria3646Open in IMG/M
3300021332|Ga0210339_1266088All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1457Open in IMG/M
3300021432|Ga0210384_11126017All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300023444|Ga0256747_1062001All Organisms → cellular organisms → Bacteria1863Open in IMG/M
3300023444|Ga0256747_1069615Not Available1742Open in IMG/M
3300023444|Ga0256747_1070286All Organisms → cellular organisms → Bacteria1732Open in IMG/M
3300025310|Ga0209172_10160238All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300025910|Ga0207684_10692116All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300025923|Ga0207681_11012451All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300025931|Ga0207644_10867640All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300025971|Ga0210102_1021949All Organisms → cellular organisms → Bacteria1374Open in IMG/M
3300025986|Ga0207658_10765051All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300026088|Ga0207641_10201409All Organisms → cellular organisms → Bacteria1836Open in IMG/M
3300026088|Ga0207641_11388274All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300026111|Ga0208291_1024540All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300027877|Ga0209293_10075755All Organisms → cellular organisms → Bacteria → Acidobacteria1461Open in IMG/M
3300027887|Ga0208980_10148024All Organisms → cellular organisms → Bacteria1376Open in IMG/M
3300028380|Ga0268265_10217612All Organisms → cellular organisms → Bacteria1669Open in IMG/M
3300028380|Ga0268265_10364493All Organisms → cellular organisms → Bacteria1324Open in IMG/M
3300030606|Ga0299906_11181147All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300030620|Ga0302046_10107927All Organisms → cellular organisms → Bacteria2272Open in IMG/M
3300031238|Ga0265332_10026830All Organisms → cellular organisms → Bacteria2524Open in IMG/M
3300031256|Ga0315556_1194511All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300031455|Ga0307505_10000550All Organisms → cellular organisms → Bacteria40321Open in IMG/M
3300031564|Ga0318573_10343480All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300031771|Ga0318546_10386213All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300031834|Ga0315290_10142967All Organisms → cellular organisms → Bacteria2053Open in IMG/M
3300032067|Ga0318524_10475139All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300032205|Ga0307472_100473267All Organisms → cellular organisms → Bacteria1072Open in IMG/M
3300032261|Ga0306920_101507901All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300032342|Ga0315286_11790869All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300032770|Ga0335085_10142331All Organisms → cellular organisms → Bacteria3023Open in IMG/M
3300032770|Ga0335085_10336685All Organisms → cellular organisms → Bacteria1774Open in IMG/M
3300032770|Ga0335085_10363478All Organisms → cellular organisms → Bacteria1692Open in IMG/M
3300033004|Ga0335084_10385107All Organisms → cellular organisms → Bacteria1446Open in IMG/M
3300033407|Ga0214472_11177431All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300033407|Ga0214472_11336033All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300033408|Ga0316605_12401165All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300033416|Ga0316622_102236164All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300033417|Ga0214471_10363586All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300033482|Ga0316627_100298520All Organisms → cellular organisms → Bacteria1321Open in IMG/M
3300033483|Ga0316629_10639475All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300033485|Ga0316626_10980456All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300033521|Ga0316616_100659371All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1243Open in IMG/M
3300033805|Ga0314864_0000406All Organisms → cellular organisms → Bacteria9155Open in IMG/M
3300034155|Ga0370498_025991All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300034178|Ga0364934_0220335All Organisms → cellular organisms → Bacteria719Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.55%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil8.55%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere6.84%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands5.13%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.42%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.42%
Hydrothermal Fe-Rich MatEnvironmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Fe-Rich Mat2.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.56%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland1.71%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.71%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater1.71%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland1.71%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment1.71%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.71%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.71%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.71%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.71%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks1.71%
BioreactorEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Bioreactor1.71%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.85%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.85%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.85%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.85%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.85%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment0.85%
MarineEnvironmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Marine0.85%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.85%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.85%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.85%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.85%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.85%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.85%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater0.85%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge0.85%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge0.85%
Down-Flow Hanging Sponge ReactorEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000443Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemlyEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300003154Anode biofilm microbial communities from J. Craig Venter Institute, USA, in microbial fuel cellsEngineeredOpen in IMG/M
3300003310Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - L1-648F-DHSEngineeredOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003992Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1EnvironmentalOpen in IMG/M
3300004000Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2EnvironmentalOpen in IMG/M
3300004027Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005826Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.186_BBAEnvironmentalOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300007521Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01EnvironmentalOpen in IMG/M
3300007799Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009702Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV14_V59a metaGEnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009870Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plantEngineeredOpen in IMG/M
3300009873Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plantEngineeredOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010356AD_USDEcaEngineeredOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300013233Combined Assembly of Gp0198154, Gp0198156, Gp0198157, Gp0198161EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014272Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300020192Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP6.G1EnvironmentalOpen in IMG/M
3300021332Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300023444Hydrothermal Fe-rich mat microbial community from Loihi Seamount, Hawaii, USA - 675-SC9EnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025971Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026111Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031238Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaGHost-AssociatedOpen in IMG/M
3300031256Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033805Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10EnvironmentalOpen in IMG/M
3300034155Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10498788923300000364SoilMAEEHEEGHVEAQDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAVTTH*
INPhiseqgaiiFebDRAFT_10570759453300000364SoilMAEEHDDGPVDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSALTVEDIADLEHLLTETLDHLLSPAYEAVSQMLGVTSGGAVTTH*
F12B_1174380823300000443SoilMADEHEDAPVEGQDVLRSLEDVRSRLRTTIWALHGMHQDMSALTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAVTTH*
JGIcombinedJ13530_10709678313300001213WetlandDGQEVLRLLDDVRNRIRITVWALHGMHQDMTALCVDDLVELEHLLTETVDHLLAPAYDAVGQMVGAAPGGAVTTH*
KVRMV2_10066274913300002231Marine SedimentSSALEDKMMPVETDEMPIEPQEALRLLDDVRSRLRITIWALHGMHQDMGALSIDDLADLEQLLTETVDHVLAPAYDAVGQMMGASPDGVVTTH*
Ga0052186_1006511433300003154BioreactorMAGDIEEAPMDGQEVLRLLEDVRSRIRITVWALHGMHQDMTALCVDDLAELEHLLTETVDHLLIPAYEALGQMIGAASPGGAVTTH*
Ga0052186_1006512613300003154BioreactorMAGDIEEAPMDGQEVLRLLEDVRSRIRITVWALHGMHQDMTALCVDDLAELEHLLTETVDHLLIPAYEALGQMIGTATPGGAVTTH*
D1draft_1000598183300003310Down-Flow Hanging Sponge ReactorMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVEDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0055471_1026142013300003987Natural And Restored WetlandsMADQHEDTAVEPQELLRSLDDVRGRIRTTIWALHGMHQDMAALTVEDLADLEHLLTETLDHVLTPACEAVGQLLGATSGGAVTTH*
Ga0055470_1003244923300003992Natural And Restored WetlandsMADEHEDGPIDAQEVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0055458_1024890213300004000Natural And Restored WetlandsMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0055459_1015697823300004027Natural And Restored WetlandsAMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0055490_1004171513300004052Natural And Restored WetlandsEHEDGPVEAQDVLRSLEDVRSRLRTTIWALHGMHQDMASLTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAATTH*
Ga0062384_10054462813300004082Bog Forest SoilMAEEHDDGPIDPQDVLRSLEDARSRLRTTIWALHGMHQDISSLTVDDLADLEHLLTETLDHLLSPAYEAVSQMVGASSGGAVTTH*
Ga0063356_10199223913300004463Arabidopsis Thaliana RhizosphereMAEQHEDAQVDTQEVMRSLEDVRIRLRTAIWALHGMHQDMAALTVDDLADLEHLMTETLDHLLTPACDAVGQLLGATSGGAVTTH*
Ga0062595_10249350713300004479SoilMADEHDDGPVDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVEDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAVTTH*
Ga0066388_100000429113300005332Tropical Forest SoilMAEEHDEGPADAQDVLRSLEDVRSRLRTMIWALHGMHQDMAALTVDDLADLEHLMTETLDHLLSPAYEAVSQMLGVSSGGAVTTH*
Ga0066388_10000407933300005332Tropical Forest SoilMAEEHDDGQADAQDVLRSLEDVRSRLRTMIWALHGMHQDMSSLTVEDLADLEHLMTETLDHLLSPAYEAVSQMLGVSSGGAVTTH*
Ga0066388_10095745913300005332Tropical Forest SoilDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAVTTH*
Ga0066388_10480043713300005332Tropical Forest SoilMAEEHEDGPINGQEVLRILEDARSRLRTTIWALHGMHQDMSSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGATSGG
Ga0070675_10032549743300005354Miscanthus RhizosphereDAMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0070667_10071277633300005367Switchgrass RhizosphereMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGA
Ga0070667_10104432513300005367Switchgrass RhizosphereMADEHDDGPVDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVEDLADLEHLLTETLDHLLSPAYEAVSQML
Ga0070700_10179389313300005441Corn, Switchgrass And Miscanthus RhizosphereMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLPTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0070685_1149492113300005466Switchgrass RhizosphereMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGAV
Ga0070707_10134089513300005468Corn, Switchgrass And Miscanthus RhizosphereMAEEHDDGPIDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGVTSGGAVTTH*
Ga0070697_10188918113300005536Corn, Switchgrass And Miscanthus RhizosphereMAEEHDDGPIDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSALTVEDIADLEHLLTETLDHLLSPAYEAVSQMLGVTSGGAVT
Ga0068853_10200562613300005539Corn RhizosphereVEGQDVLRSLEDVRSRLRTTIWALHGMHQDMSALTVEDLADLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0066903_10121264623300005764Tropical Forest SoilMAEEHEDVPIEPQEVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLTDLEHLLTETLDHLLSPAYEAVSQMLGVSSGGAVTTH*
Ga0074477_134982413300005826Sediment (Intertidal)MSDQHDEMAIDPEEVLRTLDDVRSRLRTAIWALHGMHQDVSGLTTDDLADLEHLLSETLEQLLNPAVDAVGQMLGLSTDGAVTTH*
Ga0074472_1054631423300005833Sediment (Intertidal)MADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSALTVDDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0068858_10031355713300005842Switchgrass RhizosphereMADEHDDGPVDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVEDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGG
Ga0068860_10008106533300005843Switchgrass RhizosphereMAEEHDDGPVEGQDVLRSLEDVRSRLRTTIWALHGMHQDMSALTVEDLADLEHLLTETLDHLLSPAYEA
Ga0068862_10109581413300005844Switchgrass RhizosphereDDGPIDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGVTSGGAVTTH*
Ga0068862_10204228213300005844Switchgrass RhizosphereMAEEHDDGPVDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSALTVEDIADLEHLLTETLDHLLSPAYEAVS
Ga0079037_10004048933300006224Freshwater WetlandsMADKQDDAPTDPQDVLRLLEDVRSRLRTAIWALHGMHQDMSSLSVDDLADLEHLLTETVEQVLAPAYDVVSQMIGTSPAGGAVTTH*
Ga0073934_1023316113300006865Hot Spring SedimentAQEVLHLLEDVRSRLRTTVWALHGMHQDMAALTVDDLADLEHLLTETIDHVLAPAYDAVSQMLGAPSPGGAVTTH*
Ga0105044_10001560113300007521FreshwaterMADEHQDDGPIDAQEVLQTLEDVRSRLRTTIWALHGMHQDVSALTVDDLTDLEHLLTETLDHLLSPAYEAVSQMIGATSGGAVTTH*
Ga0105049_1092535213300007799FreshwaterMADEHQDDGPIDAQEVLQTLEDVRSRLRTTIWALHGMHQDVSALTVDDLTDLEHLLTETLDHLLSPDYEAVSQMIGATSGGAVTTH*
Ga0115026_1020699033300009111WetlandLRAGQPAEEDNMADKQDDAPTDPQDVLRLLEDVRSRLRTAIWALHGMHQDMSSLSVDDLADLEHLLTETVEQVLAPAYDVVSQMIGTSPAGGAVTTH*
Ga0105248_1109537123300009177Switchgrass RhizosphereMADEHDDGPVDAQDVLRSLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0118657_1007605523300009506Mangrove SedimentMDGQDVLSLLEDVRSRIRITIWALHGMHQEMTALSVEDLADLEHLLTETVDHVLAPAYDAVGQMLGASPGGAVTTH*
Ga0118657_1214635723300009506Mangrove SedimentVFGEEDRMAGDQEERMEAQDVLRMLEDVRSRLRTTIWALHGMHQDMNALSVEDLADLEHLLTETVDHVLAPAYEAVS
Ga0114931_10001865173300009702Deep SubsurfaceMSEYHEDVAIDPEEVVRTLDDVRSRLRTAIWALHGMHQDVSGLTIDDLADLEHMLSETLEQVLTPAVDAVGQILGIAPDGSVPTTH*
Ga0126374_1008490933300009792Tropical Forest SoilMAEEHEDGPVEPQEVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLTDLEHLLTETLDHLLSPAYEAVSQMLGVSSGGAVTTH*
Ga0126374_1016811323300009792Tropical Forest SoilVYCVAASAQPEKPAQEDRMAEEHDEGPADAQDVLRSLEDVRSRLRTMIWALHGMHQDMAALTVDDLADLEHLMTETLDHLLSPAYEAVSQMLGVSSGGAVTTH*
Ga0131092_1031884233300009870Activated SludgeMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLLTETLDHLLSPAYDAVSQMLGATSGGAVTTH*
Ga0131077_1152214913300009873WastewaterMADQPQDDGPIDAQEVLRTLDDVRSRLRTLIWALHGMHQDMSSLTVDDLTDLEHLLTETLDHLLSPAYEAVSQMLGASSGGAVTTH*
Ga0126384_1004827313300010046Tropical Forest SoilVYCVAASAQPEKPAQEDRMAEEHDEGPADAQDVLRSLEDVRSRLRTMIWALHGMHQDMAALTVDDLADLEHLMTETLDHLLSPAYEAVSQMLG
Ga0126382_1045924513300010047Tropical Forest SoilMPAQEDRMAEEHDDGQADAQDVLRSLEDVRSRLRTMIWALHGMHQDMSSLTVDDLADLEHLMTETLDHLLSPAYEAVSQMLGVSSGGAVTTH*
Ga0116237_1048395243300010356Anaerobic Digestor SludgeAGCEEEAMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVEDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0126372_1065511323300010360Tropical Forest SoilMAEEHEDGPINGQEVLRTLEDARSRLRTTIWALHGMHQDMSSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0126372_1229562213300010360Tropical Forest SoilMAEEHEDGPIEPQEVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLTDLEHLLTETLDHLLSPAYEAVSQMLGVSSGGAVTTH*
Ga0126378_1162781213300010361Tropical Forest SoilMAEEHEDGPINGQEVLRTLEDARSRLRTTIWALHGMHQDVSSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0126377_1074311223300010362Tropical Forest SoilVLALQGSAWQRRRTPATPAQEDVMAEEHEEGPVEGQDVLRSLEDVRSRLRTTIWALHGMHQDMSALTVEDLADLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0126377_1298794013300010362Tropical Forest SoilMPAQEDSMAEEHDDGQADAQDVLRSLEDVRSRLRTMIWALHGMHQDMSSLTVDDLADLEHLMTETLDHLLSPAYEAVSQMLGVSSGGAVTTH*
Ga0118731_11305793423300010392MarineMSDQHEEMTIDPQEVLSTLDDVRSRLRTAIWALHGMHQDVGGLTLEDLADLEHLLSETLEQMLNPAVDAVSQMLGTDADGAMTQH*
Ga0126383_1218658223300010398Tropical Forest SoilMAEEHEDGPINGQEVLRILEDARSRLRTTIWALHGMHQDVSSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0134121_1277512823300010401Terrestrial SoilVGVREDAMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH*
Ga0150985_11383869823300012212Avena Fatua RhizosphereRAREEAMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLLTETLDHLLSPAYDAVSQMLGATSGGAVTTH*
Ga0172420_1010852533300013233MarineMSESGDEIPSEQELLLLLEDARGRLRTVIWALHGMHQDMSAVSGEDLADLEQLVTETLDHSVSPACELLSRMFGAGSGEAVTTH*
Ga0163162_1196346823300013306Switchgrass RhizosphereMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDMSSLTVEDLADLEHLPTETLDHLLSPAYEAVSQMLGASSGGAVTTH*
Ga0157375_1314396823300013308Miscanthus RhizosphereMHRARDARLQQRARQACLHCRALRGSVGASRRTRRQEDEMAEEHDDGPVEGQDVLRSLEDVRSRLRTTIWALHGMHQDMSALTVEDLADLEHLLTETLDHLLSPAYEAVSQMLGA
Ga0075327_100466033300014272Natural And Restored WetlandsMHLAEEETMANQHEEAPIDAQEVMRLLDDVRGRLRTAIWALHGMHQDVSALMVEDLADLEHLMTETLDHMLSPACDAVGQLLGATPDGAVTTH*
Ga0157379_1123428823300014968Switchgrass RhizosphereMADEHDDGPVDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVEDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAVTIH*
Ga0182032_1122239113300016357SoilMAEDHEDGPITAQDVLRTLEDARSRLRTTIWALHGMHQDISSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLG
Ga0187779_1003741023300017959Tropical PeatlandMAESQNGDSIDSQDALRLLEDVRSRLRTVIWALHGMHQDLSSLTVDDLADLEHLMTETVEQVLAPAYDAISEMIGATSSDGGTVTTH
Ga0187779_1037018823300017959Tropical PeatlandMAEEHEDGPINGQEVLRTLEDARSRLRTTIWALHGMHQDMSSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH
Ga0187894_1021512123300019360Microbial Mat On RocksMADEHHDDGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDLASLTVDDLSDLEHLLTETLDHLLSPAYEAVSHMLGAATSGAETTH
Ga0187893_1001417553300019487Microbial Mat On RocksMAEEHEEGPIDGQEVLRSLEDARSRLRTTIWALHGMHQDMSSLTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGVSSGGAVTTH
Ga0163147_1004151743300020192Freshwater Microbial MatMADEHQDDGPIDAQEVLQTLEDVRSRLRTTIWALHGMHQDVSALTVDDLTDLEHLLTETLDHLLSPAYEAVSQMIGATSGGAVTTH
Ga0210339_126608833300021332EstuarineMSDQHDEMAIDPEEVLRTLDDVRSRLRTAIWALHGMHQDVSGLTTDDLADLEHLLSETLEQLLNPAVDAVGQMLGLSTDGAVTTH
Ga0210384_1112601723300021432SoilMAEEHEDGPLDPQEVLRSLEDARSRLRTTIWALHGMHQDVSSLTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAITTH
Ga0256747_106200133300023444Hydrothermal Fe-Rich MatMSVNCDEIPTEQEMLLLLEDVRGRLRTVIWALHGMHQDMSALTVDDLADLEHILTEALDHALSPACEIISHMVGTSSNDAVTTH
Ga0256747_106961533300023444Hydrothermal Fe-Rich MatMADECDREVVDSQEVLRLLEDVRSRIRTVIWALHGMHQDMTALSVDDLADLEQLLTETVDQVLAPAYEAATNVLGMLPDGVVTTH
Ga0256747_107028633300023444Hydrothermal Fe-Rich MatMSEYHEEIAIDPEEVVRTLDDVRSRLRTAIWALHGMHQDVSGLTIDDLADLEHMLSETLEQVLTPAVDAVGQILGVAPDGAVPTTH
Ga0209172_1016023813300025310Hot Spring SedimentAQEVLHLLEDVRSRLRTTVWALHGMHQDMAALTVDDLADLEHLLTETIDHVLAPAYDAVSQMLGAPSPGGAVTTH
Ga0207684_1069211613300025910Corn, Switchgrass And Miscanthus RhizosphereSAKCVQMSARQVSISAVPCTARQCVAASAQPEFTAREDGMAEEHDDGPIDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGVTSGGAVTTH
Ga0207681_1101245123300025923Switchgrass RhizosphereRSLEDVRIRLRTAIWALHGMHQDMAALTVDDLADLEHLMTETLDHLLTPACDAVGQLLGATSGGAVTTH
Ga0207644_1086764013300025931Switchgrass RhizosphereMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDMSSLTVEDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAVTTH
Ga0210102_102194943300025971Natural And Restored WetlandsEHEDGPVEAQDVLRSLEDVRSRLRTTIWALHGMHQDMASLTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAATTH
Ga0207658_1076505133300025986Switchgrass RhizosphereMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEHLLTETLDHLLSPAYEAVSQM
Ga0207641_1020140913300026088Switchgrass RhizosphereMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVSSLTVDDLSDLEPPLTETLDHLLSPAYEAVSQMLGATSGGAVTTH
Ga0207641_1138827433300026088Switchgrass RhizosphereMADEHDDGPVDAQDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVEDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAVT
Ga0208291_102454013300026111Natural And Restored WetlandsMANQHEEAPIDAQEVMRLLDDVRGRLRTAIWALHGMHQDVSALMVEDLADLEHLMTETLDHMLSPACDAVGQLLGATPDGAVTTH
Ga0209293_1007575523300027877WetlandMADKQDDAPTDPQDVLRLLEDVRSRLRTAIWALHGMHQDMSSLSVDDLADLEHLLTETVEQVLAPAYDVVSQMIGTSPAGGAVTTH
Ga0208980_1014802433300027887WetlandMAAEEEDAPLDGQEVLRLLDDVRNRIRITVWALHGMHQDMTALCVDDLAELEHLLTETVDHLLAPAYEAVGQMLGATPGGAVTTH
Ga0268265_1021761223300028380Switchgrass RhizosphereMAEQHEDAQVDTQEVMRSLEDVRIRLRTAIWALHGMHQDMAALTVDDLADLEHLMTETLDHLLTPACDAVGQLLGATSGGAVTTH
Ga0268265_1036449343300028380Switchgrass RhizosphereEMAEEHDDGPVEGQDVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH
Ga0299906_1118114713300030606SoilAQEVMRLLDDVRGRLRTAIWALHGMHQDMSALMVEDLADLEHLMTETLDHMLSPACDAVGQLLGATSDGAVTTH
Ga0302046_1010792743300030620SoilMANQHEEAPIDTQEVMRLLDDVRGRLRTAIWALHGMHQDMSALMVEDLADLEHLMTETLDHMLSPACDAVGQLLGATSDGAVTTH
Ga0265332_1002683033300031238RhizosphereMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDLASLTVDDLSDLEHLLTETLDHLLSPAYEAVSHMLGSQSNGAETTH
Ga0315556_119451113300031256Salt Marsh SedimentMADDHDDGPIDAEEVVRSLEEVRGRLRTAIWALHGMHQDVQALTVDDLAGLEQLMTETVDHLLTPAYEAVSQMLLGANSGGAVTTH
Ga0307505_10000550133300031455SoilMSDFEEDVAIDPEEIVRTLDDVRSRLRTAIWALHGMHQDVSGLTTDDLADLEHMLSETLEQVLTPAVDAVGQILGVAPDGAVPTTH
Ga0318573_1034348023300031564SoilMAEDHEDGPITAQDVLRTLEDARSRLRTTIWALHGMHQDISSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGATPGGAATTH
Ga0318546_1038621313300031771SoilRGVRGSVGAAGNPAREDAMAEDHEDGPITAQDVLRTLEDARSRLRTTIWALHGMHQDISSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGATPGGAATTH
Ga0315290_1014296733300031834SedimentMADEHHDDGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDLASLTVDDLSDLEHLLTETLDHLLSPAYEAVSHMLGAPSSGAETTH
Ga0318524_1047513913300032067SoilMAEDHEDGPITAQDVLRTLEDARSRLRTTIWALHGMHQDISSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGAT
Ga0307472_10047326723300032205Hardwood Forest SoilMAEEHDDGPVEGQDVLRSLEDVRSRLRTTIWALHGMHQDMSALTVEDLADLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH
Ga0306920_10150790123300032261SoilMAEDHEDGPITAQDVLRTLEDARSRLRTTIWALHGMHQDISSLTVDDLADVEHLLTETLDHLLSPAYEAVSQMLGATPGG
Ga0315286_1179086923300032342SedimentMAAEEEDAPLDGQEVLRLLDDVRNRIRITVWALHGMHQDMTALCVDDLAELEHLLTETVDHLLAPAYEAIGQMLGATPGGAVT
Ga0335085_1014233153300032770SoilMAEEHEGGPIDAQEVLRSLEDVRSRLRTTIWALHGMHQDMSSLTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGASSGGAVTTH
Ga0335085_1033668533300032770SoilMADKQDDVPSDPQEILRLLEDVRGRLRTAVWALHGMHQDPSSLSPDDLADLEHMMSETVEHILTPAYEALSQMLGA
Ga0335085_1036347823300032770SoilMAESQNEEAAIDPQDALRLLEDVRSRLRTVIWALHGMHQDLSSLSVDDLADLEHLMTETVEQVLAPAYDAISQMLGAATSGGGAVTTH
Ga0335084_1038510723300033004SoilMADKQDDVPSDPQEILRLLEDVRGRLRTAVWALHGMHQDPSSLSPDDLADLEHMMSETVEHILTPAYEALSQMLGASSSGEVTTH
Ga0214472_1117743113300033407SoilMADEEGSLEVDAMHLLEEARSRLRTVIWALHGMHQDMTALTADDLADLEHLLTETVDHILGPAGEAISQLMGASPGGAVTTH
Ga0214472_1133603323300033407SoilMADQHEDTPTDPQEVLRSLEDVRSRIRTTIWALHGMHQDMGALTVEDLADLEHLLTETLDHLLTPACDAVGQLLGATPGGAVTTH
Ga0316605_1240116513300033408SoilMADERQDAPIDGQEMLRLLEDVRSRIRIAVWALHGMHQDMTALCVDDLAELEQLLTETVDHLLAPAYEALGQMIGATSGGAVTTH
Ga0316622_10223616423300033416SoilMADERQDAPIDGQEMLRLLEDVRSRIRIAVWALHGMHQDMTALCVDDLAELEQLLTETVDHLLAPAYEALGQMIGATSGGVVTTH
Ga0214471_1036358633300033417SoilMADEHHDDGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDLSSLTVDDLSDLEHLLTETLDHLLSPAYEAVSHMLGSVHDGAETTH
Ga0316627_10029852033300033482SoilMADEHQDEGPIDAQEVLRTLEDVRSRLRTTIWALHGMHQDVTSLTVDDLSDLEHLLTETLDHLLSPAYEAVSQMLGATSGGAVTTH
Ga0316629_1063947513300033483SoilMADEQRDAPIDGQEMLRLLEDVRSRIRIAVWALHGMHQDMTALCVDDLAELEQLLTETVDHLLAPAYEALGQMIGATSGGAVTTH
Ga0316626_1098045613300033485SoilMAENTTEDQEQGAVEPQDVLHLLEDVRSRLRTVIWALHGMHQDMSALTVDDLADLEHLMTETVDHVLAPAYEAISQMFGSDGGSAVTTH
Ga0316616_10065937133300033521SoilDGVTTSLRAGQPAEEDNMADKQDDAPTDPQDVLRLLEDVRSRLRTAIWALHGMHQDMSSLSVDDLADLEHLLTETVEQVLAPAYDVVSQMIGTSPAGGAVTTH
Ga0314864_0000406_868_11703300033805PeatlandMAASTQPAAPAQEDVMAEEHEEEPTEGQDVLRLLDDIRSRLRTTIWALHGMHQDMSALTVDDLADLEHLLTETLDHLLSPVCEAVSQLLGATSGGAVTTH
Ga0370498_025991_317_5743300034155Untreated Peat SoilMAEQHEDAPIDAQEVMRSLEDVRSRLRTAIWALHGMHQDMAALTVDDLADLEHLMTETLDHLLTPVCDAVSQLLGATSGGAVTTH
Ga0364934_0220335_22_2793300034178SedimentMAEEHEDGPIDGQDVLRSLEDVRSRLRTTIWALHGMHQDMSALTVDDLADLEHLLTETLDHLLSPAYEAVSQMLGVTSGGAVTTH

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.