Metagenome / Metatranscriptome Family F077516

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077516
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	58 residues
Representative Sequence	KDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Number of Associated Samples	75
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.87 %
% of genes from short scaffolds (< 2000 bps)	73.50 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.974 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.479 % of family members)
Environment Ontology (ENVO)	Unclassified (42.735 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.812 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 1.75% Coil/Unstructured: 98.25%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF12697	Abhydrolase_6	4.27
PF00561	Abhydrolase_1	2.56
PF00106	adh_short	1.71
PF00583	Acetyltransf_1	1.71
PF11158	DUF2938	1.71
PF01738	DLH	1.71
PF02371	Transposase_20	1.71
PF07858	LEH	1.71
PF02738	MoCoBD_1	1.71
PF01548	DEDD_Tnp_IS110	1.71
PF00092	VWA	0.85
PF13432	TPR_16	0.85
PF13426	PAS_9	0.85
PF03551	PadR	0.85
PF00078	RVT_1	0.85
PF00383	dCMP_cyt_deam_1	0.85
PF11700	ATG22	0.85
PF14319	Zn_Tnp_IS91	0.85
PF05406	WGR	0.85
PF05050	Methyltransf_21	0.85
PF01609	DDE_Tnp_1	0.85
PF07238	PilZ	0.85
PF06348	DUF1059	0.85
PF07107	WI12	0.85
PF13650	Asp_protease_2	0.85
PF07676	PD40	0.85
PF00691	OmpA	0.85
PF01022	HTH_5	0.85
PF13751	DDE_Tnp_1_6	0.85
PF10282	Lactonase	0.85
PF00069	Pkinase	0.85
PF11706	zf-CGNR	0.85
PF02781	G6PD_C	0.85
PF14224	DUF4331	0.85
PF13490	zf-HC2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.42
COG3547	Transposase	Mobilome: prophages, transposons [X]	3.42
COG3631	Ketosteroid isomerase-related protein	General function prediction only [R]	1.71
COG4308	Limonene-1,2-epoxide hydrolase LimA/EphG	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.71
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.85
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.85
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.85
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.85
COG3831	WGR domain, predicted DNA-binding domain in MolR	Transcription [K]	0.85
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.85
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.85
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.97 %
Unclassified	root	N/A	41.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.97 %
Unclassified	root	N/A	41.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.97 %
Unclassified	root	N/A	41.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.03 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.40 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.03 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.03 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	4.27 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.85 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	0.85 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	4.27 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
unclassified Acidisoma	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma	0.85 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	4.27 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Acidisoma sp. L85	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma → Acidisoma sp. L85	0.85 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.85 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig31385	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300003368\|JGI26340J50214_10059372	Not Available	1038	Open in IMG/M
3300004633\|Ga0066395_10499808	Not Available	700	Open in IMG/M
3300005435\|Ga0070714_101618163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300005842\|Ga0068858_100737933	Not Available	959	Open in IMG/M
3300005921\|Ga0070766_10789485	Not Available	646	Open in IMG/M
3300006052\|Ga0075029_100098193	All Organisms → cellular organisms → Bacteria → Acidobacteria	1755	Open in IMG/M
3300006176\|Ga0070765_101137303	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300006176\|Ga0070765_102246620	Not Available	508	Open in IMG/M
3300006804\|Ga0079221_10029605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2308	Open in IMG/M
3300009093\|Ga0105240_10816960	Not Available	1009	Open in IMG/M
3300009545\|Ga0105237_11417083	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300009545\|Ga0105237_12343151	Not Available	544	Open in IMG/M
3300010048\|Ga0126373_10279868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1655	Open in IMG/M
3300010048\|Ga0126373_10559867	Not Available	1192	Open in IMG/M
3300010048\|Ga0126373_11539116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300010048\|Ga0126373_12346493	Not Available	594	Open in IMG/M
3300010048\|Ga0126373_12917701	Not Available	533	Open in IMG/M
3300010360\|Ga0126372_10777729	Not Available	945	Open in IMG/M
3300010361\|Ga0126378_11490226	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300010366\|Ga0126379_10007863	Not Available	7289	Open in IMG/M
3300010376\|Ga0126381_101163695	Not Available	1114	Open in IMG/M
3300010863\|Ga0124850_1043141	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300012961\|Ga0164302_11826413	Not Available	514	Open in IMG/M
3300015374\|Ga0132255_104079454	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300016270\|Ga0182036_10535752	Not Available	932	Open in IMG/M
3300016270\|Ga0182036_10689814	Not Available	825	Open in IMG/M
3300016294\|Ga0182041_10105739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2079	Open in IMG/M
3300016294\|Ga0182041_10486244	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300016294\|Ga0182041_11485243	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300016319\|Ga0182033_10216075	Not Available	1535	Open in IMG/M
3300016319\|Ga0182033_12149996	Not Available	509	Open in IMG/M
3300016341\|Ga0182035_10022210	All Organisms → cellular organisms → Bacteria	3961	Open in IMG/M
3300016341\|Ga0182035_10140156	Not Available	1840	Open in IMG/M
3300016357\|Ga0182032_10191667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1549	Open in IMG/M
3300016357\|Ga0182032_11676168	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300016387\|Ga0182040_10008018	All Organisms → cellular organisms → Bacteria → Acidobacteria	5279	Open in IMG/M
3300016404\|Ga0182037_10448869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1072	Open in IMG/M
3300016422\|Ga0182039_10025689	All Organisms → cellular organisms → Bacteria → Acidobacteria	3702	Open in IMG/M
3300016422\|Ga0182039_10170311	All Organisms → cellular organisms → Bacteria → Acidobacteria	1708	Open in IMG/M
3300017928\|Ga0187806_1065751	Not Available	1121	Open in IMG/M
3300017970\|Ga0187783_11037336	Not Available	591	Open in IMG/M
3300017970\|Ga0187783_11405169	Not Available	503	Open in IMG/M
3300018007\|Ga0187805_10350423	Not Available	682	Open in IMG/M
3300020579\|Ga0210407_10169709	All Organisms → cellular organisms → Bacteria → Acidobacteria	1687	Open in IMG/M
3300020580\|Ga0210403_10030930	All Organisms → cellular organisms → Bacteria	4278	Open in IMG/M
3300020580\|Ga0210403_10938910	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300020581\|Ga0210399_10002322	All Organisms → cellular organisms → Bacteria	14837	Open in IMG/M
3300020581\|Ga0210399_10010058	All Organisms → cellular organisms → Bacteria	7396	Open in IMG/M
3300020581\|Ga0210399_10193364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1690	Open in IMG/M
3300021171\|Ga0210405_10739367	Not Available	757	Open in IMG/M
3300021181\|Ga0210388_10130800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2169	Open in IMG/M
3300021181\|Ga0210388_10281918	Not Available	1459	Open in IMG/M
3300021404\|Ga0210389_10155171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma → Acidisoma sp. L85	1776	Open in IMG/M
3300021406\|Ga0210386_10989889	Not Available	717	Open in IMG/M
3300021477\|Ga0210398_10818896	Not Available	749	Open in IMG/M
3300021559\|Ga0210409_10094287	Not Available	2763	Open in IMG/M
3300021560\|Ga0126371_10883070	Not Available	1038	Open in IMG/M
3300021560\|Ga0126371_12907431	Not Available	580	Open in IMG/M
3300024187\|Ga0247672_1102332	Not Available	504	Open in IMG/M
3300024347\|Ga0179591_1085170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2244	Open in IMG/M
3300025898\|Ga0207692_10016448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3277	Open in IMG/M
3300025924\|Ga0207694_11841728	Not Available	508	Open in IMG/M
3300025928\|Ga0207700_11773172	Not Available	543	Open in IMG/M
3300026849\|Ga0207804_104678	Not Available	1343	Open in IMG/M
3300026869\|Ga0207821_1013810	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300027070\|Ga0208365_1039806	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300027842\|Ga0209580_10416572	Not Available	670	Open in IMG/M
3300027911\|Ga0209698_11049946	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300027911\|Ga0209698_11079832	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300030813\|Ga0265750_1039928	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300031122\|Ga0170822_14140303	Not Available	567	Open in IMG/M
3300031573\|Ga0310915_10260744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1220	Open in IMG/M
3300031715\|Ga0307476_10044802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2996	Open in IMG/M
3300031718\|Ga0307474_10057990	All Organisms → cellular organisms → Bacteria → Acidobacteria	2865	Open in IMG/M
3300031718\|Ga0307474_10709872	Not Available	794	Open in IMG/M
3300031744\|Ga0306918_10639519	Not Available	833	Open in IMG/M
3300031879\|Ga0306919_10081238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	2235	Open in IMG/M
3300031879\|Ga0306919_10090805	All Organisms → cellular organisms → Bacteria → Proteobacteria	2127	Open in IMG/M
3300031890\|Ga0306925_10043321	Not Available	4666	Open in IMG/M
3300031890\|Ga0306925_10082241	All Organisms → cellular organisms → Bacteria	3406	Open in IMG/M
3300031890\|Ga0306925_10108031	All Organisms → cellular organisms → Bacteria	2966	Open in IMG/M
3300031890\|Ga0306925_10336178	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300031890\|Ga0306925_12134898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300031910\|Ga0306923_10255173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2006	Open in IMG/M
3300031910\|Ga0306923_10718715	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300031910\|Ga0306923_11235662	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300031912\|Ga0306921_10137895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2849	Open in IMG/M
3300031912\|Ga0306921_10171454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	2541	Open in IMG/M
3300031912\|Ga0306921_10675214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189	Open in IMG/M
3300031912\|Ga0306921_10958953	All Organisms → cellular organisms → Bacteria → Acidobacteria	967	Open in IMG/M
3300031912\|Ga0306921_11295188	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300031941\|Ga0310912_10069072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	2538	Open in IMG/M
3300031946\|Ga0310910_10015268	All Organisms → cellular organisms → Bacteria → Acidobacteria	4919	Open in IMG/M
3300031946\|Ga0310910_10065764	Not Available	2601	Open in IMG/M
3300031946\|Ga0310910_10269312	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300031946\|Ga0310910_10404090	Not Available	1082	Open in IMG/M
3300031946\|Ga0310910_10517201	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300031947\|Ga0310909_10049785	Not Available	3214	Open in IMG/M
3300031954\|Ga0306926_10292775	All Organisms → cellular organisms → Bacteria → Acidobacteria	2015	Open in IMG/M
3300031954\|Ga0306926_10531584	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300031954\|Ga0306926_11450241	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300032076\|Ga0306924_10023850	All Organisms → cellular organisms → Bacteria → Acidobacteria	6540	Open in IMG/M
3300032076\|Ga0306924_10841627	All Organisms → cellular organisms → Bacteria → Acidobacteria	1019	Open in IMG/M
3300032076\|Ga0306924_10951123	Not Available	946	Open in IMG/M
3300032180\|Ga0307471_100634544	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1229	Open in IMG/M
3300032261\|Ga0306920_100073099	All Organisms → cellular organisms → Bacteria	5027	Open in IMG/M
3300032783\|Ga0335079_10515351	Not Available	1273	Open in IMG/M
3300032892\|Ga0335081_11386462	Not Available	786	Open in IMG/M
3300033004\|Ga0335084_11920931	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300033158\|Ga0335077_10669052	Not Available	1073	Open in IMG/M
3300033289\|Ga0310914_10700458	Not Available	908	Open in IMG/M
3300033290\|Ga0318519_10023359	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300033290\|Ga0318519_10098461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1570	Open in IMG/M
3300033290\|Ga0318519_10256647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300033828\|Ga0334850_054888	Not Available	750	Open in IMG/M
3300034163\|Ga0370515_0378719	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.02%
Host-Associated	Host-Associated	5.13%
Engineered	Engineered	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Aquatic	Environmental → Aquatic	5.13%
Plants	Host-Associated → Plants	5.13%
Modeled	Engineered → Modeled	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.42%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Sediment	Environmental → Aquatic → Sediment	2.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.71%
Peat	Environmental → Terrestrial → Peat	0.85%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.65%
Loam	Environmental → Terrestrial → Soil → Loam	9.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026849	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0385.00002620	2166559005	Simulated	MFFLPMKDPAELNANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
JGI26340J50214_100593722	3300003368	Bog Forest Soil	MFFLPMKDPAELNADDPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0066395_104998081	3300004633	Tropical Forest Soil	DPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0070714_1016181631	3300005435	Agricultural Soil	PIKDPAELNADDPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0068858_1007379331	3300005842	Switchgrass Rhizosphere	PIKDPAELNANDPNSPISSTSVWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0070766_107894852	3300005921	Soil	NDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0075029_1000981931	3300006052	Watersheds	DPNSPISSTSMWFPDPDKPDSPLNKDLPPLRTVPIEVPYWSDGTLAFH*
Ga0070765_1011373031	3300006176	Soil	DPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0070765_1022466201	3300006176	Soil	DPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0079221_100296051	3300006804	Agricultural Soil	NDPKAPIFSTSMWFPDPDKPDSPLNNELPPLRTVPIEVPYWSDGTLAFH*
Ga0105240_108169602	3300009093	Corn Rhizosphere	FFLPIKDPAELNAHDPDSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0105237_114170832	3300009545	Corn Rhizosphere	PAELNANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0105237_123431511	3300009545	Corn Rhizosphere	KDPAELNANDPNSPISSTSVWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0126373_102798681	3300010048	Tropical Forest Soil	PKSPISSTSMWFPDPDKPDSPLNKELPPLRTVPVEVPYWSDGTLAFH*
Ga0126373_105598672	3300010048	Tropical Forest Soil	DANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVVIEVPYWSDGTLAFH*
Ga0126373_115391161	3300010048	Tropical Forest Soil	MKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0126373_123464932	3300010048	Tropical Forest Soil	SHNLCHVMLFLPIKDPAELDANDPNSPISCTSMWFPYPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0126373_129177011	3300010048	Tropical Forest Soil	FLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTPAFH*
Ga0126372_107777291	3300010360	Tropical Forest Soil	KDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0126378_114902261	3300010361	Tropical Forest Soil	AELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIKVPYWSDGTLAFH*
Ga0126379_100078636	3300010366	Tropical Forest Soil	ANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0126381_1011636952	3300010376	Tropical Forest Soil	ASGELGDNDPNSPISSTSMWFPDPDKPDNPLNKELPPLRTVPIAVPYWSDGTVAFK*
Ga0124850_10431413	3300010863	Tropical Forest Soil	MFFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0164302_118264131	3300012961	Soil	PISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSLGPMALLRSTK*
Ga0132255_1040794541	3300015374	Arabidopsis Rhizosphere	HVMLFLPIKDPAELNANDPNSPISSTSLWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH*
Ga0182036_105357521	3300016270	Soil	KDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKGLPPLRTVPIEVPYWSDGTLAFH
Ga0182036_106898141	3300016270	Soil	DPAELNANDPNSPISSTSMWFPDPDKPDSPLNKELPALRTVPIEVPYWSDGTLAFH
Ga0182041_101057393	3300016294	Soil	LDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTLAFH
Ga0182041_104862441	3300016294	Soil	ELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIKVPYWSDGTLAFH
Ga0182041_114852432	3300016294	Soil	DNDPNSPISSTSMWFPDPDKPDNPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0182033_102160751	3300016319	Soil	KDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0182033_121499961	3300016319	Soil	FLPMKAPGELGENDPNSPVSSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFHK
Ga0182035_100222101	3300016341	Soil	PMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTLAFH
Ga0182035_101401561	3300016341	Soil	ELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0182032_101916671	3300016357	Soil	FFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTLAFH
Ga0182032_116761682	3300016357	Soil	LDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIKVPYWSDGTLAFH
Ga0182040_100080181	3300016387	Soil	KDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTLAFH
Ga0182037_104488691	3300016404	Soil	SASGELGDNDPNSPISSTSMWFPDPDKPDNPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0182039_100256891	3300016422	Soil	MFFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVAIEVPYWSDGTLAFH
Ga0182039_101703111	3300016422	Soil	ASGELGDNDPNSPISSTSMWFPDPDKPDNPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0187806_10657513	3300017928	Freshwater Sediment	MKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0187783_110373361	3300017970	Tropical Peatland	KDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVVIEVPYWSDGTVAFH
Ga0187783_114051691	3300017970	Tropical Peatland	AGELGEDDPNAPLGSTSMWFPDPDKPDSPLNKELPPLRTVPVEVPYWSDGTLAFH
Ga0187805_103504231	3300018007	Freshwater Sediment	PMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVAIPVPYWSDGTLAFTK
Ga0210407_101697092	3300020579	Soil	PMKDPAELNADDPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0210403_100309307	3300020580	Soil	MFFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTLAFH
Ga0210403_109389101	3300020580	Soil	DPAELNADDPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0210399_1000232214	3300020581	Soil	NDPDSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSNGTLAFH
Ga0210399_100100588	3300020581	Soil	NDPDSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0210399_101933641	3300020581	Soil	VMFFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0210405_107393672	3300021171	Soil	FFLPIKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0210388_101308001	3300021181	Soil	VMFFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIQVPYWSDGTLAFH
Ga0210388_102819181	3300021181	Soil	ANDRDSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0210389_101551713	3300021404	Soil	DPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0210386_109898891	3300021406	Soil	VMFFLPIKDPAELDANDPDSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0210398_108188961	3300021477	Soil	ELNADDPKAPIFSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTPAFH
Ga0210409_100942874	3300021559	Soil	MKDPAELNADDPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPVEVPYWSDGTLAFH
Ga0126371_108830702	3300021560	Tropical Forest Soil	MFFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKGLPPLRTVPIEVPYWSDGTLAFH
Ga0126371_129074312	3300021560	Tropical Forest Soil	GELGDNDPNSPVSSTSMWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0247672_11023321	3300024187	Soil	FLPMKDPAELDANDSNAPISSTSIWFPDPDKPDSPLNKGLPPLRTVPIKVPYWSDGTLAF
Ga0179591_10851702	3300024347	Vadose Zone Soil	MHTLPHLGSHNLCHVMFFLPIKDPAELNAMIRTHPFLRQISGSRTPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0207692_100164481	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	IKDPAELNANDPNSPISSTSMWFPDPDKPDSPLNKMLPPLRTVPIEVPYWSDGTLAFH
Ga0207694_118417281	3300025924	Corn Rhizosphere	MFFLPIKDPAELNADDPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0207700_117731722	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	KDPAELNANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0207804_1046782	3300026849	Tropical Forest Soil	MFFLPMKAAGELGDNDPKSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0207821_10138102	3300026869	Tropical Forest Soil	IKDPAELNANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0208365_10398061	3300027070	Forest Soil	FLPIKDPAELNADDPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAF
Ga0209580_104165722	3300027842	Surface Soil	LPIKDPAELNANDPNSPISSTSMWFPDPDKPDSQLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0209698_110499461	3300027911	Watersheds	LPIKDPAELNADDPNAPIFSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDDTVAFH
Ga0209698_110798322	3300027911	Watersheds	LPIKDPAELNADDPNAPIFSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0265750_10399282	3300030813	Soil	FFLPMKDPAELNADEPISPISSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0170822_141403032	3300031122	Forest Soil	FFLPMKASGELGDNDPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0310915_102607441	3300031573	Soil	PMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVAIEVPYWSDGTLAFH
Ga0307476_100448021	3300031715	Hardwood Forest Soil	PIKDPGELNADDPNSPIFSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0307474_100579904	3300031718	Hardwood Forest Soil	MFFLPMKDPVELNADDPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0307474_107098721	3300031718	Hardwood Forest Soil	DPKAPISSTSIWFPDPDKADSPLNKELPPLRTVPIEVPYWSDGTPAFH
Ga0306918_106395191	3300031744	Soil	MFFLLMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPRLRTVPIEVPYWSDGTLAFH
Ga0306919_100812381	3300031879	Soil	DPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVAIEVPYWSDGTLAFH
Ga0306919_100908051	3300031879	Soil	MKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIQVPYWSDGTLAFH
Ga0306925_100433211	3300031890	Soil	ANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0306925_100822416	3300031890	Soil	FFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKGLPPLRTVPIEVPYWSDGTLAFH
Ga0306925_101080315	3300031890	Soil	LPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIQVPYWSDGTLAFH
Ga0306925_103361783	3300031890	Soil	PAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0306925_121348981	3300031890	Soil	DANDPGSPVSSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFHK
Ga0306923_102551732	3300031910	Soil	FLPMKAPGELGDNDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTVAF
Ga0306923_107187153	3300031910	Soil	PMKASGELGDNDPKSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0306923_112356622	3300031910	Soil	PAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIKVPYWSDGTLAFH
Ga0306921_101378953	3300031912	Soil	DANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGSLAFH
Ga0306921_101714545	3300031912	Soil	FFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVAIEVPYWSDGTLAFH
Ga0306921_106752141	3300031912	Soil	PMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0306921_109589533	3300031912	Soil	FFLPMKASGELGDNDPNSPISSTSMWFPDPDKPDNPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0306921_112951881	3300031912	Soil	LPIKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0310912_100690724	3300031941	Soil	VMFFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVAIEVPYWSDGTLAFH
Ga0310910_100152688	3300031946	Soil	MYFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVAIEVPYWSDGTLAFH
Ga0310910_100657644	3300031946	Soil	FFLPLKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0310910_102693123	3300031946	Soil	MKASGELGDNDPKSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0310910_104040902	3300031946	Soil	LPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0310910_105172011	3300031946	Soil	PMKASGELGDNDPNSPISSTSMWFPDPDKPDNPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0310909_100497851	3300031947	Soil	PMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPRLRTVPIEVPYWSDGTLAFH
Ga0306926_102927751	3300031954	Soil	MFFLPMKASGELGDNDPNSPISSTSMWFPDPDKPDNPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0306926_105315841	3300031954	Soil	MFFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIQVPYWSDGTLAFH
Ga0306926_114502411	3300031954	Soil	MFFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0306924_100238507	3300032076	Soil	FFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIQVPYWSDGTLAFH
Ga0306924_108416272	3300032076	Soil	GDNDPNSPISSTSMWFPDPDKPDNPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0306924_109511232	3300032076	Soil	FFLPMKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0307471_1006345442	3300032180	Hardwood Forest Soil	DANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0306920_1000730994	3300032261	Soil	DPNSPISSTSMWFPDPDKPDSPLNKELPALRTVPIEVPYWSDGTLAFH
Ga0335079_105153511	3300032783	Soil	MMSKNAYLSHLGQTHNLCHVMFFLPIKAGELGENDPNAPLGSTSMWFPDPDKPDSPLNKELPPLRTVPVEVPYWSDGTLAFH
Ga0335081_113864621	3300032892	Soil	CHVMFFLPIKAGELGENDPNAPLGSTSMWFPDPDKPDSPLNKELPPLRTVPVEVPYWSDGTLAFH
Ga0335084_119209311	3300033004	Soil	MFFLPMRASGELGDNDPNSPISSTSFWFPDPDKPDSPLNKELPPLRTVPIAVPYWSDGTVAFK
Ga0335077_106690522	3300033158	Soil	HNLCHVMFFLPIKAGELGENDPNAPLGSTSMWFPDPDKPDSPLNKELPPLRTVPVEVPYWSDGTLAFH
Ga0310914_107004581	3300033289	Soil	MFFLPIKDPAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH
Ga0318519_100233591	3300033290	Soil	FLSMKDPAELNANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAF
Ga0318519_100984611	3300033290	Soil	PAELDANDPNSPISSTSMWFPDPDKPDSPLNKELPPLRTVAIEVPYWSDGTLAFH
Ga0318519_102566472	3300033290	Soil	EPDSPISSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFHK
Ga0334850_054888_1_168	3300033828	Soil	PDELNAGDPDTPIFSTSMWFPDPDKPDSPLNKELPPLRTVPIEVPFWSDGTPAYQ
Ga0370515_0378719_8_199	3300034163	Untreated Peat Soil	MFFLPMKDPAELNADDPNSPISSTSIWFPDPDKPDSPLNKELPPLRTVPIEVPYWSDGTLAFH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077516

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences