Metagenome / Metatranscriptome Family F077519

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077519
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	73 residues
Representative Sequence	MHVLLHDDLGRLTLRRLRPWHRVLARSRAARLDRELAEGKSPEASATLAARAMRLTSTDFRRDLAASL
Number of Associated Samples	100
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.10 %
% of genes near scaffold ends (potentially truncated)	92.31 %
% of genes from short scaffolds (< 2000 bps)	86.32 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.684 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (49.573 % of family members)
Environment Ontology (ENVO)	Unclassified (51.282 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.991 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.63% β-sheet: 10.42% Coil/Unstructured: 48.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF11706	zf-CGNR	23.08
PF07336	ABATE	20.51
PF00664	ABC_membrane	3.42
PF13191	AAA_16	3.42
PF01264	Chorismate_synt	0.85
PF04545	Sigma70_r4	0.85
PF00211	Guanylate_cyc	0.85
PF00005	ABC_tran	0.85
PF00440	TetR_N	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	20.51
COG0082	Chorismate synthase	Amino acid transport and metabolism [E]	0.85
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.68 %
All Organisms	root	All Organisms	39.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.68 %
cellular organisms	root	All Organisms → cellular organisms	39.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.06 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.68 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	15.38 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5.13 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.42 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.42 %
Actinobacteria bacterium 21-73-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	15.38 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	5.13 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.42 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.42 %
Actinobacteria bacterium 21-73-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.68 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	15.38 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	3.42 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.42 %
Actinobacteria bacterium 21-73-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.68 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	15.38 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.42 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	3.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.42 %
Actinobacteria bacterium 21-73-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10177292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	863	Open in IMG/M
3300004091\|Ga0062387_101444747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	549	Open in IMG/M
3300004635\|Ga0062388_100987600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300005541\|Ga0070733_10784891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	640	Open in IMG/M
3300005610\|Ga0070763_10295246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	889	Open in IMG/M
3300005610\|Ga0070763_10625862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	625	Open in IMG/M
3300006050\|Ga0075028_101055190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	508	Open in IMG/M
3300006176\|Ga0070765_101043941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300009525\|Ga0116220_10145484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1016	Open in IMG/M
3300009839\|Ga0116223_10210571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1185	Open in IMG/M
3300010046\|Ga0126384_12318838	Not Available	518	Open in IMG/M
3300010376\|Ga0126381_102013736	Not Available	832	Open in IMG/M
3300010379\|Ga0136449_102819754	Not Available	685	Open in IMG/M
3300010379\|Ga0136449_104069498	Not Available	545	Open in IMG/M
3300010379\|Ga0136449_104571337	Not Available	507	Open in IMG/M
3300014501\|Ga0182024_11191058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	892	Open in IMG/M
3300016357\|Ga0182032_10952977	Not Available	731	Open in IMG/M
3300016404\|Ga0182037_12012930	Not Available	518	Open in IMG/M
3300016422\|Ga0182039_12274498	Not Available	500	Open in IMG/M
3300017821\|Ga0187812_1079133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1085	Open in IMG/M
3300017823\|Ga0187818_10389788	Not Available	618	Open in IMG/M
3300017924\|Ga0187820_1054945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1083	Open in IMG/M
3300017924\|Ga0187820_1100483	Not Available	832	Open in IMG/M
3300017924\|Ga0187820_1129033	Not Available	747	Open in IMG/M
3300017928\|Ga0187806_1218174	Not Available	651	Open in IMG/M
3300017939\|Ga0187775_10448246	Not Available	543	Open in IMG/M
3300017942\|Ga0187808_10208120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	871	Open in IMG/M
3300017959\|Ga0187779_10903940	Not Available	608	Open in IMG/M
3300017972\|Ga0187781_10559956	Not Available	823	Open in IMG/M
3300017972\|Ga0187781_10698355	Not Available	734	Open in IMG/M
3300017974\|Ga0187777_11463582	Not Available	505	Open in IMG/M
3300017975\|Ga0187782_10156436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1697	Open in IMG/M
3300018007\|Ga0187805_10314504	Not Available	721	Open in IMG/M
3300018085\|Ga0187772_10095561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1907	Open in IMG/M
3300020150\|Ga0187768_1107764	Not Available	636	Open in IMG/M
3300020581\|Ga0210399_11339814	Not Available	562	Open in IMG/M
3300021178\|Ga0210408_10531860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	933	Open in IMG/M
3300021406\|Ga0210386_11295726	Not Available	613	Open in IMG/M
3300021474\|Ga0210390_11557062	Not Available	521	Open in IMG/M
3300025633\|Ga0208480_1119209	Not Available	615	Open in IMG/M
3300025634\|Ga0208589_1144059	Not Available	544	Open in IMG/M
3300027568\|Ga0208042_1101796	Not Available	726	Open in IMG/M
3300027680\|Ga0207826_1009104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2692	Open in IMG/M
3300027727\|Ga0209328_10233177	Not Available	552	Open in IMG/M
3300027737\|Ga0209038_10225485	Not Available	564	Open in IMG/M
3300027768\|Ga0209772_10010160	All Organisms → cellular organisms → Bacteria → Acidobacteria	2566	Open in IMG/M
3300027869\|Ga0209579_10132069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1328	Open in IMG/M
3300027908\|Ga0209006_10571546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	936	Open in IMG/M
3300027908\|Ga0209006_11304347	Not Available	561	Open in IMG/M
3300029999\|Ga0311339_10561692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1145	Open in IMG/M
3300029999\|Ga0311339_11291456	Not Available	662	Open in IMG/M
3300030503\|Ga0311370_10929218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	981	Open in IMG/M
3300030520\|Ga0311372_11119749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1020	Open in IMG/M
3300030707\|Ga0310038_10427533	Not Available	571	Open in IMG/M
3300030730\|Ga0307482_1038995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1104	Open in IMG/M
3300031090\|Ga0265760_10368994	Not Available	515	Open in IMG/M
3300031525\|Ga0302326_10907980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1251	Open in IMG/M
3300031543\|Ga0318516_10267619	Not Available	988	Open in IMG/M
3300031544\|Ga0318534_10066935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2029	Open in IMG/M
3300031549\|Ga0318571_10127051	Not Available	861	Open in IMG/M
3300031549\|Ga0318571_10228243	Not Available	677	Open in IMG/M
3300031640\|Ga0318555_10211900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1045	Open in IMG/M
3300031668\|Ga0318542_10276085	Not Available	858	Open in IMG/M
3300031680\|Ga0318574_10486727	Not Available	723	Open in IMG/M
3300031681\|Ga0318572_10138357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1401	Open in IMG/M
3300031682\|Ga0318560_10424074	Not Available	720	Open in IMG/M
3300031724\|Ga0318500_10353234	Not Available	726	Open in IMG/M
3300031736\|Ga0318501_10068723	Not Available	1705	Open in IMG/M
3300031747\|Ga0318502_10137556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1384	Open in IMG/M
3300031747\|Ga0318502_11037197	Not Available	501	Open in IMG/M
3300031751\|Ga0318494_10159243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1274	Open in IMG/M
3300031765\|Ga0318554_10058697	Not Available	2118	Open in IMG/M
3300031765\|Ga0318554_10343622	Not Available	848	Open in IMG/M
3300031765\|Ga0318554_10580343	Not Available	632	Open in IMG/M
3300031768\|Ga0318509_10111822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1482	Open in IMG/M
3300031768\|Ga0318509_10359883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300031770\|Ga0318521_10459984	Not Available	762	Open in IMG/M
3300031771\|Ga0318546_10142915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1607	Open in IMG/M
3300031777\|Ga0318543_10358968	Not Available	652	Open in IMG/M
3300031779\|Ga0318566_10111306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1348	Open in IMG/M
3300031782\|Ga0318552_10122095	Not Available	1298	Open in IMG/M
3300031793\|Ga0318548_10528082	Not Available	576	Open in IMG/M
3300031797\|Ga0318550_10527478	Not Available	569	Open in IMG/M
3300031798\|Ga0318523_10039508	Not Available	2177	Open in IMG/M
3300031798\|Ga0318523_10660281	Not Available	514	Open in IMG/M
3300031819\|Ga0318568_10002249	All Organisms → cellular organisms → Bacteria	8841	Open in IMG/M
3300031831\|Ga0318564_10378713	Not Available	620	Open in IMG/M
3300031832\|Ga0318499_10020594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2289	Open in IMG/M
3300031835\|Ga0318517_10560878	Not Available	514	Open in IMG/M
3300031890\|Ga0306925_10144990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2553	Open in IMG/M
3300031893\|Ga0318536_10437943	Not Available	659	Open in IMG/M
3300031910\|Ga0306923_10302008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1829	Open in IMG/M
3300031942\|Ga0310916_11504956	Not Available	549	Open in IMG/M
3300031959\|Ga0318530_10343415	Not Available	618	Open in IMG/M
3300032008\|Ga0318562_10519839	Not Available	689	Open in IMG/M
3300032009\|Ga0318563_10086361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	1645	Open in IMG/M
3300032010\|Ga0318569_10332838	Not Available	707	Open in IMG/M
3300032025\|Ga0318507_10346267	Not Available	647	Open in IMG/M
3300032060\|Ga0318505_10433010	Not Available	622	Open in IMG/M
3300032063\|Ga0318504_10112691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1228	Open in IMG/M
3300032063\|Ga0318504_10315001	Not Available	742	Open in IMG/M
3300032065\|Ga0318513_10385873	Not Available	683	Open in IMG/M
3300032066\|Ga0318514_10805150	Not Available	500	Open in IMG/M
3300032076\|Ga0306924_10606755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1238	Open in IMG/M
3300032090\|Ga0318518_10232184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	946	Open in IMG/M
3300032091\|Ga0318577_10141975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1141	Open in IMG/M
3300032094\|Ga0318540_10418298	Not Available	647	Open in IMG/M
3300032160\|Ga0311301_10365264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2242	Open in IMG/M
3300032896\|Ga0335075_10829851	Not Available	860	Open in IMG/M
3300033289\|Ga0310914_10126493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2231	Open in IMG/M
3300033290\|Ga0318519_11032288	Not Available	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.03%
Aquatic	Environmental → Aquatic	11.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.76%
Freshwater	Environmental → Aquatic → Freshwater	11.11%
Peat	Environmental → Terrestrial → Peat	4.27%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.55%
Loam	Environmental → Terrestrial → Soil → Loam	6.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	49.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.13%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.71%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_101772921	3300003505	Forest Soil	MYVLLDDDRGALTLKRLWPWHQILVRGRATQLDRALAAGTSPEASASLAVRAAQLTSTGFRHDLAASLRRILMAAGE
Ga0062387_1014447472	3300004091	Bog Forest Soil	MYVLVDGDHGRLTLKRLRPWHQVLARGRAARLDRELAEGASPEASVSLAARAAQLTSTQFRHD
Ga0062388_1009876001	3300004635	Bog Forest Soil	MHILLDDDRGRLTLRRLWPWQRVLVQGAAARLDRALANGARPEASASLAARATRLTSTEFRRDLAASLRRILV
Ga0070733_107848911	3300005541	Surface Soil	MYVLIEDDRAGLALRRLRPWHRLLAQCQAGRLDRELAEGASPEASAALAARAMRLTSLGYRRDLAASLRRIVLAAGEPE
Ga0070763_102952462	3300005610	Soil	MHVLLDDDRGRLTLRRLWPWQRVLVQGVAGRLDRALADGARPEASASLAARAARLTSTEFRRDLAAS
Ga0070763_106258621	3300005610	Soil	MHVLLHDDQGRLALRRLWPWQRLLAHAAAARLDHALAEGASPEESASLATRAARLTSTEFRRDLAASLRRILV
Ga0075028_1010551901	3300006050	Watersheds	MHVLLDDERGQLILKRLWPWHQVLARGQAARLDRELAAGTSPEASASLAARARRLTSTEFRRDLAASLRRILV
Ga0070765_1010439412	3300006176	Soil	MHVLLDDDRGRLTLRRLWPWQRVLAQGAAARLDRALADGARPEANASLAARATRLTSTEFRRDLAASLR
Ga0116220_101454841	3300009525	Peatlands Soil	MYVLIDDDRAGLALQRLRPWHRLLASCQAGRLDRELAEGASPEASTALAARAMRLT
Ga0116223_102105711	3300009839	Peatlands Soil	MHILLDDDRAGLTARRLWPWERVLARSQAARLDRELAEGASPEANATLAARAARLTSTEFRCDLAAS
Ga0126384_123188382	3300010046	Tropical Forest Soil	MHVLLNDNLGRLTLQRLKPWHRMAARCRAPRLDRELAGGTSPEASASLAARAMRLTSMRFRYHLAASVQRILVAAGQPPAVMPSP
Ga0126381_1020137362	3300010376	Tropical Forest Soil	MHLLVHDELGRLTLRRLRPWHRVLARARAARLDRDLAAGVSPEASATLAARALQLTSAGFRRHLAA
Ga0136449_1028197542	3300010379	Peatlands Soil	MYVLIDDDRAGLALRRLRPWHRLLASCRAGRLDRELAEGASPEASTVLAARAVQLTSLDYRRDLATSLRRIVLAAGE
Ga0136449_1040694981	3300010379	Peatlands Soil	MYVLIDDDRAGLALRRLRPWHRLLASSQAGRLDRELAEGASPEASTALAARAVQLTSLDYRRDLATSLRRIVLA
Ga0136449_1045713371	3300010379	Peatlands Soil	MHVLLDDDLGRLTVRGLRPWHRMLARGLAARLDRQLANGARPEASAILAARAMFLTSVGFRRALAASLQRILAASASPSP
Ga0182024_111910581	3300014501	Permafrost	MHVLLEDELGRLTLYRLRPWDRVVAQCLAWRLDRELARGACPETNVSLAAR
Ga0182032_109529771	3300016357	Soil	MHVLLDDERGQLILKRIRPWHQVLARGQAARLDRELAAGTSPETSASLAARAGRLTSTEFRR
Ga0182037_120129302	3300016404	Soil	MHVLLHDDLGRLTLGRLRPWHRVLARSRAARLDRELGAGMSPEASATLAARAMRLTSTDLRRDLAASLLRILAAAGEPAAV
Ga0182039_122744982	3300016422	Soil	VIHVLVHDDLGRLTLRRLRPWHRVLARTRAARLDRELAGGKSPEASVTLAARAMRLTSPGFRRDL
Ga0187812_10791331	3300017821	Freshwater Sediment	MHVLLDDDRGGLTARRLWPWERVLARSQAARLDRELAEGASPEANATRAARAARLTSTEFRRDLAASLRRILAAAGEP
Ga0187818_103897882	3300017823	Freshwater Sediment	MHVLLDDDRGRLIARRLWPWERVLARGQAARLDRELAEGASPEANATLAARATRLTSTEFRRDLAASLRRILAVAREPATAADARVPLGSGRP
Ga0187820_10549452	3300017924	Freshwater Sediment	MHILLDDDRAGLTARRLWPWERVLARSQAARLDRELAEGASPEANAALAARAARLTSTEFRRDLAASLRRILA
Ga0187820_11004833	3300017924	Freshwater Sediment	MHVLLHDDLGRLTLRRLRPWHRVLARTWATRLDRELAGGTSPEASATLAARAVDVPGFRRDLAASLQRIL
Ga0187820_11290332	3300017924	Freshwater Sediment	MHVLLDDDQGRLTLRRLRPWHKMLARSRAARLDRELADGASPEASAALAARAIRLTSMEFRRGLAASLQRMLAAA
Ga0187806_12181742	3300017928	Freshwater Sediment	MHVLLDDERGQLILKRLWPWHQVLARGQAARLDRKLAAGTSPEASASLAARAGRLTSTGFRRDLAASLRRILVAAGE
Ga0187809_102330521	3300017937	Freshwater Sediment	MHVLLDDDQGRLTLRRLRPWHKMLARSRAARLDRELAGGASPEASADLAARAMRLTSMEFRRGLAASLQRMLVAAGEPAILRSPPVTGHAALT
Ga0187775_104482462	3300017939	Tropical Peatland	MLVLLDDDRGRMALRRLRPWHWMLARSRAARLDRELAGGAAPEASAALAARAMRLTSMEFRRGLAASLQRILTTAG
Ga0187808_102081201	3300017942	Freshwater Sediment	MHVLLDDDQGRLTLRRLRPWHKMLARSRAARLDRELADGASPEASAALAARAIRLTSMEFRRG
Ga0187779_109039402	3300017959	Tropical Peatland	MYVLLDDDEGCLTLRRIGPWTRMLARVLGARLDRELADGTSPEANASLAARAMWLTSMEFRRGLAVQLVG
Ga0187781_105599561	3300017972	Tropical Peatland	MYVLVHDVRAGLALRRLQPWHRVLARCQAGRLDRELAEGSSPEANAALAARANRLTSMEFRRDLAASLRRIVVATGEPAPVWSAPA
Ga0187781_106983551	3300017972	Tropical Peatland	MMHVLLDDDRGRLIVRRLWPWHRVLARSRAARLDRELAEGVSPEANASLAARATRLTSTRFRRDL
Ga0187777_114635821	3300017974	Tropical Peatland	MHVLLDDGRGRLTLKRLWPWQQVLARSQAARLDRELAEGTSPEASARLAARAERLTSTEFRRDLAMSLRRILVAAGEPALPEAVAVPLG
Ga0187782_101564363	3300017975	Tropical Peatland	MMHVLLDDDRGRLIVRRLWPWHRVLARSRAARLDRELAEGVSPEANASLAARATRLTSTRFRRDLAASLRRILVAAGEPA
Ga0187805_103145042	3300018007	Freshwater Sediment	MYVLIDDDRVGLALRRLRPWHQLLAHCQAGRLDRQLAEGASPEASAALAARAMRLTSLGYRRDLAASLRRIVLATGE
Ga0187772_100955613	3300018085	Tropical Peatland	MLVLLDDDRGRMTLQRLRPWHKILARSQAARLDRELAGGASPEASAILAARAIRLTSMEYRRGLAASLQRVLVAAGESVI
Ga0187768_11077641	3300020150	Tropical Peatland	MHVLVDDDRGRLTLRRLGPWPAMLARSRAARLDRELAGGASPEASAALAARAMRLTSMEFRRG
Ga0210399_113398142	3300020581	Soil	MHVLLDDERGQLILKRLWPWHQVLARGQAARLDRELAAGTSPEASARLAARAGRLTSTEYRRDLAASLRRILVAA
Ga0210408_105318602	3300021178	Soil	MHVLLDDDRGRLTLRRLWPWQRVLVQGAAARLDRALADGARPEASASLAARATRLTSTEFRRDLAASLR
Ga0210386_112957261	3300021406	Soil	MHVLLDDDRGRLTLCRLWPWQRVLVQGVAARLDRALADGARPEASASLAARAARLTSTEFRRDLAASLRRILVAAGEPAL
Ga0210390_115570622	3300021474	Soil	MHVLLDDDRGRLTLRRLWPWQRVLVQGAAARLDRALAGGARPEASASLAARATRLTSTEFRRDLAA
Ga0208480_11192092	3300025633	Arctic Peat Soil	MHVLLQDDQGRLALYRLRPWHQLAARLLADRLDRELAGGARPEAAPSLAARAIRLTSTNFRCGLAVSLQ
Ga0208589_11440591	3300025634	Arctic Peat Soil	MHVLLDDDRGRLTLCRLWPWQRVLVQGAAARLDRALADGARPEASASLAARATRLTSTEFRRDL
Ga0208042_11017961	3300027568	Peatlands Soil	MYVLIDDDRAGLALRRLRPWHRLLARCQAGRLDRELAEGASPEASAALAARAMRLTSLGYRRDLAASL
Ga0207826_10091043	3300027680	Tropical Forest Soil	MHVLLDDDRGRLTLRRLRPWHTMLARSRAARLDRELAGGASPEASATLAARAMALTSMKFRRDLATSLQRMLATAGEP
Ga0209328_102331772	3300027727	Forest Soil	MHVLLNDDLGCLTLRRLRPWHRMLARVLAARLDRQLADGVPPEANATLAARAIRLTAMEYRRDLAASLRGILAAAGWPAAAVP
Ga0209038_102254852	3300027737	Bog Forest Soil	MHILLDDDRGRLTLRRLWPWQRVLVQGAAARLDRALANGARPEAGASLAARATRLTSTEFRRDLA
Ga0209772_100101604	3300027768	Bog Forest Soil	MHVLLDDDLGRLTLRRLRPWHRMAARCRAARLDRELAGGASPEASASLAARAMRLTSMQFRHDLAASVQRILV
Ga0209579_101320691	3300027869	Surface Soil	MYVLIEDDRAGLALRRLRPWHRLLAQCQAGRLDRELAEGASPEASAALAARAMRLTSLGYRRDLAASLRRIVLAS
Ga0209006_105715462	3300027908	Forest Soil	MHVLVNDDRGGLALCRLWPWQRVLAQHATARLDRALAAGARPEASAGLAARATRLTSTGFRRDLAASLRRILVAAG
Ga0209006_113043472	3300027908	Forest Soil	MHVLLEDDQGRLTLCRLRPWHRLAARFLAGRLDHELASGARPEADPSLAARAIRLTSTNFRRDIAVSLQRLLAARSR
Ga0311339_105616921	3300029999	Palsa	MHVLLEDDQGRLALYRLRPWHQLAARFLADRLDHELARGTRPEAHPSLAARAIRLTSTNFRRGLAV
Ga0311339_112914561	3300029999	Palsa	MHVLLEDDQGRLALYRLRPWHQLAARFLADRLDHELARGARPEADPSLAARAIRLTSMNFRRGLAVSLQRLLAARSLP
Ga0311370_109292182	3300030503	Palsa	MHVLLEDDQGRLTLYRLRPWHQLAARFLADRLDHELARGARPEAAPSLAARAIRLTSTNFRRSLAVSLQ
Ga0311372_111197491	3300030520	Palsa	MHVLLEDDQGRLALYRLRPWHQLAARFLADRLDHELARGARPEADPSLAARAIRLTSMNFRRGLAVSLQRLLAARSLPG
Ga0310038_104275331	3300030707	Peatlands Soil	MYVLIDDDRAGLALQRLRPWHRLLASCQAGRLDRELAEGASPEASTALAARAIRLTSLDYRRDLAASLRRIVVVATGQP
Ga0307482_10389951	3300030730	Hardwood Forest Soil	MHVLLDDERGQLILKRLSPWRQVLARSQAARLDRELAAGTSPETSASLAARAERLTSTEFRCDLAAAV
Ga0265760_103689941	3300031090	Soil	MHVLLEDDQGSLTIQRLRPWDRIMARCLAARLDRELAGGTRPETTRPLAARAIRLTS
Ga0302326_109079803	3300031525	Palsa	MHVLLEDDQGRLALYRLRPWHQLAARFLADRLDHELARGARPEADPSLAARAIRLTSMNFRRGLA
Ga0318516_102676191	3300031543	Soil	MHVLVHDDPGRLTLRRLRPWHRVLARSQAARLDRELADGVSPEASATLAARALRLTSTDFRRDLAT
Ga0318534_100669353	3300031544	Soil	MQVLLHDELGRLTLRRLRPWHRVLARSRAARLDRELAGGVSPEASAALAARAIRLTSTDFRRALAGSLQRILAAAGEPPA
Ga0318541_104689341	3300031545	Soil	MGRWTLRRLRPWHRVLARSRGARLDRELPGGMSQEASATLAARAIRLTSTGFRRELAASLQRILAAGEPPAVLRSQMAA
Ga0318571_101270511	3300031549	Soil	MHVLVHDDPGRLTLRRLRPWHRVLARSQAARLDRELADGVSPEASATLAARALRLTSTDFRRDLATSLQRILAAGGGQRPG
Ga0318571_102282431	3300031549	Soil	MQVLLHDHLGRWTLRQLRPWHRVLARSRAARLDRDLASGMSPEASPALAARAIRLTSTGFRRDLAASLQRILAAAGEPRAVL
Ga0318528_100553554	3300031561	Soil	MGRWTLRRLRPWHRVLARSRGARLDRELPGGMSQEASATLAARAIRLTSTGFRRELAASLQRILAAGEPPAVLQ
Ga0318555_102119003	3300031640	Soil	MYVLLDDDQGRLTFRRLRPWHRMLARSRAVRLDRELADGASPEASAALAARAMRLTSMEFRR
Ga0318542_102760853	3300031668	Soil	MHVLVHDDPGRLTLRRLRPWHRVLARSQAARLDRELADGVSPEASATLAARALQLTSTDFRRD
Ga0318574_104867271	3300031680	Soil	MHVLFADGRGQLTLKRLWPWHQILARSQAARLDRALAEGASPEASASLAARAAQLTSTGFRRDLAVGLRRILVAAEPHDPPA
Ga0318572_101383571	3300031681	Soil	VIHVLVHDDLGRLTLRRLRPWHRVLARTRAARLDRELAGGKSPEASVTLAARAMRLTSPGFRRDLAASLQRIL
Ga0318560_104240743	3300031682	Soil	MHILLHDDLGRLTLGRLRPWHRVLAGSRAARLDRELAAGMSPEASAILAARAMRLTSTDFRRDLAASLLRILAAARE
Ga0318500_103532341	3300031724	Soil	MLVLLDDDRDQLTLRRLWPWHQLLARIRSARLDRALAEGASPEASASLAARAAQLTSTGFRRDLAAGLRRILV
Ga0318501_100687231	3300031736	Soil	MHVLLHDDLGRLTLRRLRPWHRVLARSRAARLDRELAEGKSPEASATLAARAMRLTSTDFRRDLA
Ga0318502_100140775	3300031747	Soil	MGRWTLRRLRPWHRVLARSRGARLDRELPGGMSQEASATLAARAIRLTSTGFRRELTASLQRILAAGEPPAVLRS
Ga0318502_101375565	3300031747	Soil	VIHVLVHDDLGRLTLRRLRPWHRVLARTRAARLDRELAGGKSPEASVTLAARAMRLTSPGFRRDLAASLQRILAAAGKPPAVM
Ga0318502_110371971	3300031747	Soil	MHVLLDDERGQLILKRIRPWHQVLARGQAARLDRELAAGTSPETSASLAARAGRLTSTEFRRD
Ga0318494_101592433	3300031751	Soil	MYVLLDDDQGRLTFRRLRPWHRMLARSRAVRLDRELADGASPEASAALAARAMRLTSMEFRRGLAASLQRMLAAR
Ga0318554_100586971	3300031765	Soil	MYVLLDDDQGRLTFRRLRPWHRMLARSRAVRLDRELADGASPEASAALAARAMRLTSMEFRRGLAASLQRMLAASSERP
Ga0318554_103436221	3300031765	Soil	MHVLVHDDPGRLTLRRLRPWHRVLARSQAARLDRELADGVSPEASATLAARALQLTSTDFRRDLATSLQ
Ga0318554_105803431	3300031765	Soil	MQVLLHDHLGRWTLRQLRPWHRVLARSRAARLDRDLASGMSPEASPALAARAIRLTSTGFRRDLAASLQR
Ga0318509_101118221	3300031768	Soil	MHVLLDDDRGGLTVRRLRPWHRMLARSRAARLDRELAGGASPEASATLAARAMALTSMKFRRDL
Ga0318509_103598831	3300031768	Soil	VIHVLVHDDLGRLTLRRLRPWHRVLARTRAARLDRELAGGKSPEASVTLAARAMRLTSPGFRRDLAASLQR
Ga0318521_104599841	3300031770	Soil	MHVLVHDDLGRLTLRRLRPWHRVLARSRAARLDRELAGGVSPEASATLAARALRLTSAGFRRDLATS
Ga0318546_101429151	3300031771	Soil	MHVLLDDDRGGLTVRRLRPWHRMLARSRAARLDRELAGGASPETSTSLAARAMALTSMEFRRGLAASLQRILAAAE
Ga0318543_103589682	3300031777	Soil	MQVLLHDHLGRWTLRQLRPWHRVLARSRAARLDRDLASGMSPEASPALAARAIRLTSTGFRRDLAASLQRILAAAGEPRA
Ga0318566_101113061	3300031779	Soil	MHVLLDDDRGGLTVRRLRPWHRMLARSRAARLDRELAGGASPETSTSLAARAMALTSMEFRRALAASLQRILAA
Ga0318552_101220951	3300031782	Soil	MHVLVHDDLGRLTLRRLRPWHRVLARARAARLDRELAGGVSPEASATLAARALRLTSPGFRRDLAASLQR
Ga0318548_105280822	3300031793	Soil	MHILLHDDLGRLTLGRLRPWHRVLAGSRAARLDRELAAGMSPEASAILAARAMRLTSTDFRRDLAASLLRIL
Ga0318550_105274783	3300031797	Soil	MQVLLHDDLGRLTLRRLRPWHRVLARSRAAWLDRELAGGMDPEASAILAARAIRLTSTDFRRDLA
Ga0318523_100395086	3300031798	Soil	MQVLLHDHLGRWTLRQLRPWHRVLARSRAARLDRDLASGMSPEASPALAARAIRLTSTGFRRDLAASLQRILA
Ga0318523_106602812	3300031798	Soil	MHVLLDDDRGGLTVRRLRPWHRMLARSRAARLDRELAGGASPETSTSLAARAMALTSMEFRRGLAASLQRILAAAEL
Ga0318568_1000224914	3300031819	Soil	MHVLLHDDLGRLTLRRLRPWHRVLARSRAARLDRELAEGKSPEASATLAARAMRLTSTDFRRDLAASL
Ga0318564_103787132	3300031831	Soil	MLVLLDDDRDQLTLRRLWPWHQLLARIRSARLDRALAEGASPEASASLAARAAQLTSTGFRRDLAAGLRRILVAAEPH
Ga0318499_100205944	3300031832	Soil	MGRWTLRRLRPWHRVLARSRGARLDRELPGGMSQEASATLAARAIRLTSTGFRRELAASLQRI
Ga0318517_105608781	3300031835	Soil	MHVLLHDDLGRLTLGRLRPWHRVLARSRAARLDRELAAGMSPEASATLAARAMRLTSTDLRRDLAASLL
Ga0306925_101449903	3300031890	Soil	MQVLLHDELGRLTLRRLRPWHRVLARSRAARLDRELAGGVSPEASATLAARAIRLTSTDFRRALAGSLQRILAAA
Ga0318536_104379432	3300031893	Soil	MYVLLDDDQGRLTFRRLRPWHRMLARSRAVRLDRELADGASPEASAALAARAMRLTSMEFRRGLAASLQRMLAAAG
Ga0318551_100964571	3300031896	Soil	MGRWTLRRLRPWHRVLARSRGARLDRELPGGMSQEASATLAARAIRLTSTGFRRELAASLQRILAAGEPPAVLQSQ
Ga0306923_103020083	3300031910	Soil	MQVLLHDELGRLTLRRLRPWHRVLARSRAARLDRELAGGVSPEASAALAARAIRLTSTDFRRALAGSLQRILAAAG
Ga0310916_115049561	3300031942	Soil	MQVLLHDHLGRWTLRQLRPWHRVLARSRAARLDRDLASGMSPEASPALAARAIRLTSTGFRRDLAASLQRILAAAGEPRAVLR
Ga0318530_103434152	3300031959	Soil	MHVLLDDERGQLILKRLWPWHQVLARGQAARLDRELAAGTSPETSASLAARAGRLTSTEFRRDL
Ga0318562_105198392	3300032008	Soil	MQVLLHDELGRLTLRRLRPWHRVLARSRAARLDRELAGGVSPEASATLAARAIRLTSTDFRRA
Ga0318563_100863612	3300032009	Soil	MHILLHDDLGRLTLGRLRPWHRVLAGSRAARLDRELAAGMSPEASAILAARAMRLTSTDFRRDLAASLLRILAAAREPTAVMRGDGQPIAGRRLGAALP
Ga0318569_103328381	3300032010	Soil	MHILLHDDLGRLTLGRLRPWHRVLAGSRAARLDRELAAGMSPEASAILAARAMRLTSTDFRRDLAASLLRILAAAREPTAVMRSQQV
Ga0318507_103462672	3300032025	Soil	MQVLLHDELGRLTLRRLRPWHRVLARSRAARLDRELAGGVSPEASAALAARAIRLTSTDFRRALAGSLQ
Ga0318505_104330101	3300032060	Soil	MHVLLDDNQGQLTLKRLWPWHQMLARGQAARLDRALAEGASPEASTSLAARAAQLTSTEFRRDLA
Ga0318504_101126914	3300032063	Soil	VIHVLVHDDLGRLTLRRLRPWHRVLARTRAARLDRELAGGKSPEASVTLAARAMRLTSPGFRRDLAASLQRILAAAGK
Ga0318504_103150012	3300032063	Soil	MHVLLDDDRGGLTVRRLRPWHRMLARSRAARLDRELAGGASPETSTSLAARAMALTSMEFRRALAASLQRILAAAELH
Ga0318513_103858732	3300032065	Soil	MQVLLHDHLGRWTLRQLRPWHRVLARSRAARLDRDLAGGMSPEASPTLAARAIRLTSTGFRRDLAASLLCILAAAGEPP
Ga0318514_108051501	3300032066	Soil	MHVLLDDERGQLILKRLWPWHQVLARGQAARLDRELAAGTSPETSASLAARAGRLTSTEFRRDLAASLQRILVASGEPARPVAAAKSVG
Ga0306924_106067551	3300032076	Soil	MHILLHDDLGRLTLGRLRPWHRVLAGSRAARLDRELAAGMSPEASAILAARAMRLTSTDFRRDLAASLLRILAAAREPTA
Ga0318518_102321842	3300032090	Soil	MHVLLDDDRGGLTVRRLRPWHRMLARSRAARLDRELAGGASPETSTSLAARAMALTSMEFRRGLAASLQ
Ga0318577_101419751	3300032091	Soil	MHVLLDDDRGGLTVRPLRPWHRVLARSRAARLDRELAGGASPETSTSLAARAMALTSMEFRRALAASLQRILAAAGE
Ga0318540_104182983	3300032094	Soil	VIHVLVHDDLGRLTLRRLRPWHRVLARTRAARLDRELAGGKSPEASVTLAARAMRLTSPGFRRDLAASLQRILA
Ga0311301_103652641	3300032160	Peatlands Soil	MYVLIEDDRAGLALLRLRPWHRVLAHCQAGRLDRELAEGASPEASAALAARAMRLTSLNYRR
Ga0335075_108298511	3300032896	Soil	MHVLLEEDLGRLRMQRVRPWHLLLARGRAARLDRELAGGASPEASASLATRAMQLTSSEFRRDLATA
Ga0310914_100058779	3300033289	Soil	MGRWTLRRLRPWHRVLARSRGARLDRELPGGMSQEASATLAARAIRLTSTGFRRELAASLQRILAAGEPPAVLQSQMAATCP
Ga0310914_101264931	3300033289	Soil	MHILLHDDLGRLTLGRLRPWHRVRAGSRAARLDRELAAGMSPEASAILAARAMRLTSTDFRRDLAASLLRILAAAR
Ga0318519_110322882	3300033290	Soil	MHILLHDDLGRLTLGRLRPWHRVLAGSRAARLDRELAAGMSPEASAILAARAMRLTSTDFRRDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences