Metagenome / Metatranscriptome Family F077541

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077541
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	71 residues
Representative Sequence	MILIPREYIALPGGAIKRVYSLEQGDGSLALGDHEAWLASRAARCSCGRVCRGSGRTCGQPECIARLATV
Number of Associated Samples	63
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.94 %
% of genes near scaffold ends (potentially truncated)	28.21 %
% of genes from short scaffolds (< 2000 bps)	70.09 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.684 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.803 % of family members)
Environment Ontology (ENVO)	Unclassified (40.171 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.35% β-sheet: 18.37% Coil/Unstructured: 64.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00135	COesterase	21.37
PF14561	TPR_20	19.66
PF13834	DUF4193	17.95
PF13432	TPR_16	3.42
PF14559	TPR_19	3.42
PF00248	Aldo_ket_red	1.71
PF00004	AAA	1.71
PF13428	TPR_14	1.71
PF13181	TPR_8	1.71
PF01361	Tautomerase	1.71
PF00326	Peptidase_S9	0.85
PF07719	TPR_2	0.85
PF05977	MFS_3	0.85
PF01230	HIT	0.85
PF13599	Pentapeptide_4	0.85
PF00459	Inositol_P	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	21.37
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.71
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.68 %
Unclassified	root	N/A	39.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.68 %
Unclassified	root	N/A	39.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.68 %
Unclassified	root	N/A	39.32 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.56 %
Unclassified	root	N/A	39.32 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.56 %
Unclassified	root	N/A	39.32 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.17 %
Unclassified	root	N/A	39.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.27 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.42 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.42 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.27 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.42 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.56 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.27 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.56 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.71 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.27 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.56 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.71 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.27 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.56 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.71 %
Pseudonocardia sp. CNS-004	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-004	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100066794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2727	Open in IMG/M
3300005445\|Ga0070708_100617421	Not Available	1022	Open in IMG/M
3300005468\|Ga0070707_100105223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2736	Open in IMG/M
3300005518\|Ga0070699_100850392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300005602\|Ga0070762_10027505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3016	Open in IMG/M
3300005602\|Ga0070762_10645186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300005610\|Ga0070763_10019937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2942	Open in IMG/M
3300005712\|Ga0070764_10083293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1686	Open in IMG/M
3300005764\|Ga0066903_100036575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5692	Open in IMG/M
3300005764\|Ga0066903_100113214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3732	Open in IMG/M
3300005921\|Ga0070766_10336971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	976	Open in IMG/M
3300005921\|Ga0070766_10356462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	950	Open in IMG/M
3300006176\|Ga0070765_100310773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-004	1459	Open in IMG/M
3300006176\|Ga0070765_100528904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1109	Open in IMG/M
3300006176\|Ga0070765_102086352	Not Available	530	Open in IMG/M
3300009826\|Ga0123355_10006102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17772	Open in IMG/M
3300009826\|Ga0123355_10583507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1335	Open in IMG/M
3300010043\|Ga0126380_11734094	Not Available	562	Open in IMG/M
3300010048\|Ga0126373_10012799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6856	Open in IMG/M
3300010048\|Ga0126373_10018943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5777	Open in IMG/M
3300010048\|Ga0126373_10060611	All Organisms → cellular organisms → Bacteria	3390	Open in IMG/M
3300010048\|Ga0126373_10184957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2008	Open in IMG/M
3300010048\|Ga0126373_10574118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1178	Open in IMG/M
3300010048\|Ga0126373_10825961	Not Available	989	Open in IMG/M
3300010049\|Ga0123356_13936264	Not Available	512	Open in IMG/M
3300010361\|Ga0126378_12617943	Not Available	576	Open in IMG/M
3300010366\|Ga0126379_10174940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2033	Open in IMG/M
3300010366\|Ga0126379_10896168	Not Available	989	Open in IMG/M
3300010366\|Ga0126379_12288589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300010376\|Ga0126381_100147596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3082	Open in IMG/M
3300010376\|Ga0126381_101035966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1184	Open in IMG/M
3300010376\|Ga0126381_101368753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300010376\|Ga0126381_101482678	Not Available	980	Open in IMG/M
3300010880\|Ga0126350_12208895	Not Available	540	Open in IMG/M
3300012971\|Ga0126369_13557684	Not Available	510	Open in IMG/M
3300017821\|Ga0187812_1266690	Not Available	545	Open in IMG/M
3300017926\|Ga0187807_1062756	Not Available	1155	Open in IMG/M
3300017926\|Ga0187807_1089685	Not Available	964	Open in IMG/M
3300017928\|Ga0187806_1010180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2630	Open in IMG/M
3300017932\|Ga0187814_10086518	Not Available	1152	Open in IMG/M
3300017933\|Ga0187801_10069225	Not Available	1304	Open in IMG/M
3300017942\|Ga0187808_10010235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3647	Open in IMG/M
3300017942\|Ga0187808_10117401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1162	Open in IMG/M
3300017942\|Ga0187808_10475292	Not Available	577	Open in IMG/M
3300017946\|Ga0187879_10216144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1073	Open in IMG/M
3300017955\|Ga0187817_11115631	Not Available	506	Open in IMG/M
3300017970\|Ga0187783_10006724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8435	Open in IMG/M
3300017970\|Ga0187783_10008912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	7361	Open in IMG/M
3300017970\|Ga0187783_10129025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1864	Open in IMG/M
3300017970\|Ga0187783_10317033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1136	Open in IMG/M
3300017970\|Ga0187783_10458144	Not Available	925	Open in IMG/M
3300017970\|Ga0187783_11190813	Not Available	549	Open in IMG/M
3300017970\|Ga0187783_11407048	Not Available	502	Open in IMG/M
3300017972\|Ga0187781_11039275	Not Available	600	Open in IMG/M
3300018007\|Ga0187805_10376131	Not Available	658	Open in IMG/M
3300018007\|Ga0187805_10613799	Not Available	514	Open in IMG/M
3300018042\|Ga0187871_10176954	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300020581\|Ga0210399_11591117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300020582\|Ga0210395_10309487	Not Available	1188	Open in IMG/M
3300020583\|Ga0210401_10201537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1848	Open in IMG/M
3300021170\|Ga0210400_10520465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M
3300021170\|Ga0210400_10532319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	970	Open in IMG/M
3300021178\|Ga0210408_10340972	Not Available	1195	Open in IMG/M
3300021181\|Ga0210388_11619054	Not Available	538	Open in IMG/M
3300021401\|Ga0210393_10555778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	938	Open in IMG/M
3300021401\|Ga0210393_10659935	Not Available	853	Open in IMG/M
3300021402\|Ga0210385_10433410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	991	Open in IMG/M
3300021402\|Ga0210385_10765988	Not Available	740	Open in IMG/M
3300021402\|Ga0210385_11181318	Not Available	587	Open in IMG/M
3300021403\|Ga0210397_10804365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300021404\|Ga0210389_10303326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1252	Open in IMG/M
3300021404\|Ga0210389_10439181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1027	Open in IMG/M
3300021406\|Ga0210386_10884666	Not Available	765	Open in IMG/M
3300021407\|Ga0210383_11168969	Not Available	648	Open in IMG/M
3300021477\|Ga0210398_10680497	Not Available	833	Open in IMG/M
3300021478\|Ga0210402_10261028	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300021478\|Ga0210402_11852781	Not Available	529	Open in IMG/M
3300021559\|Ga0210409_10946391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300021560\|Ga0126371_10006036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10760	Open in IMG/M
3300021560\|Ga0126371_10938475	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300021560\|Ga0126371_11072486	Not Available	945	Open in IMG/M
3300021560\|Ga0126371_12028138	Not Available	692	Open in IMG/M
3300025922\|Ga0207646_10228353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300027879\|Ga0209169_10206777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1026	Open in IMG/M
3300027884\|Ga0209275_10332551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	848	Open in IMG/M
3300027889\|Ga0209380_10575302	Not Available	654	Open in IMG/M
3300027908\|Ga0209006_10116150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2366	Open in IMG/M
3300028789\|Ga0302232_10130145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1276	Open in IMG/M
3300028906\|Ga0308309_10825921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	805	Open in IMG/M
3300030626\|Ga0210291_11024871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300031231\|Ga0170824_115549408	Not Available	1045	Open in IMG/M
3300031236\|Ga0302324_103573423	Not Available	503	Open in IMG/M
3300031469\|Ga0170819_17688365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1386	Open in IMG/M
3300031708\|Ga0310686_111901419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2963	Open in IMG/M
3300031708\|Ga0310686_112436072	Not Available	692	Open in IMG/M
3300031708\|Ga0310686_118482279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6515	Open in IMG/M
3300032783\|Ga0335079_10132576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2807	Open in IMG/M
3300032895\|Ga0335074_10008339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14397	Open in IMG/M
3300032895\|Ga0335074_10011251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12503	Open in IMG/M
3300032895\|Ga0335074_10106925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3666	Open in IMG/M
3300032895\|Ga0335074_10106958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3665	Open in IMG/M
3300032895\|Ga0335074_10122793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3359	Open in IMG/M
3300032895\|Ga0335074_10231722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2201	Open in IMG/M
3300032895\|Ga0335074_10280864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1924	Open in IMG/M
3300032895\|Ga0335074_10393269	Not Available	1510	Open in IMG/M
3300032895\|Ga0335074_10449598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1367	Open in IMG/M
3300032895\|Ga0335074_11292129	Not Available	604	Open in IMG/M
3300032896\|Ga0335075_10004041	All Organisms → cellular organisms → Bacteria	23009	Open in IMG/M
3300032896\|Ga0335075_10416905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1418	Open in IMG/M
3300032898\|Ga0335072_10005433	All Organisms → cellular organisms → Bacteria	18759	Open in IMG/M
3300032898\|Ga0335072_10020889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9213	Open in IMG/M
3300032898\|Ga0335072_11261385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300032898\|Ga0335072_11616047	Not Available	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.44%
Host-Associated	Host-Associated	2.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.76%
Aquatic	Environmental → Aquatic	13.68%
Arthropoda	Host-Associated → Arthropoda	2.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.05%
Freshwater	Environmental → Aquatic → Freshwater	13.68%
Digestive System	Host-Associated → Arthropoda → Digestive System	2.56%
Peat	Environmental → Terrestrial → Peat	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.08%
Loam	Environmental → Terrestrial → Soil → Loam	17.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.68%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	11.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.56%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	16.24%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	11.11%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	11.11%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	2.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1000667942	3300004152	Bog Forest Soil	MALIPREFVALPGGGIKRVYSLEQPDGSLALGDHEAWLASRAARCSCGRVCCGSGRTCGQPECIARLPRA*
Ga0070708_1006174211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LNPAACVAGDTRDMALIPREYMALPGGGIKRVYSVEMADGSVALGDHEAWLASRAARCSCGRVCRGSGRTCGLPECIA
Ga0070707_1001052231	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	REYMALPGGGIKRVYSVEMADGSVALGDHEAWLASRAARCSCGRLCRGSGRTCGLPECIARLARV*
Ga0070699_1008503922	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MALIPREYMALPGGGIKRVYSVEMADGSVALGDHEAWLASRAARCSCGRLCRGSGRTCGLPECIA
Ga0070762_100275052	3300005602	Soil	MELIPREYVALPGGALKRVYSVETADGTIALGDHNHWLAARAARCSCGNVCLGSGRTCGQPDCIERLGSSVAS*
Ga0070762_106451862	3300005602	Soil	MELIHREYVALRGGVLKRVYSVELDDGQVVLSDHESWLAARAARCSCGRVCLGSGRTCGAAECVARLSGP*
Ga0070763_100199373	3300005610	Soil	MALIPREYVALPGGALKRVYSIEQADGSLALSDHEAWLASRAARCSCGRVCCGRGRTCGQPDCIARLASV*
Ga0070764_100832933	3300005712	Soil	MELIHREYVALRGGVLKRVYSVELDDGQVVLSDHESWLAARAARCSCGRVCLGSGRTCGSAECVARLRTA*
Ga0066903_1000365752	3300005764	Tropical Forest Soil	MSDRAALLIGQNRKMDSIQREYVALPGGAIRRVYSIDQGDGTVALGDYQAWLASRAARCSCGKVCRGSGRTCGAPECIARL*
Ga0066903_1001132142	3300005764	Tropical Forest Soil	VDPIQREYMALPGGALRRVYSISQVDGTVCLGDYQAWIASRAARCSCGKVCRGSGQTCGSPECIARL*
Ga0070766_103369712	3300005921	Soil	MALIPREFVALPGGAIKRVYSIEQDDGSLALTDHEAWLASRAARCACGRVCCGSGRTCGQPECIQRLASV*
Ga0070766_103564622	3300005921	Soil	MELIPREYIALPGGALRRVYSVLTADGSLTLGDHNAWLASRAARCACGAVCRGSGRTCGDPECIARLASLVRR*
Ga0070765_1003107731	3300006176	Soil	RLRDTRYMALIPREFVALPGGAIKRVYSIEQDDGSLALTDHEAWLASRAARCSCGRVCCGSGRTCGQPECIARLAIV*
Ga0070765_1005289042	3300006176	Soil	MVLIPREYIALPGGAIKRVYSLEQGDGSLALGDHEAWLASRAARCSCGRVCRGSGRTCGQPECIALLATV*
Ga0070765_1020863521	3300006176	Soil	MELIPREYVALPGGALKRVYTVVAADGSVVLSDHGAWLASRAKRCACGSVCLGSGQTCGRTECIAKLANA*
Ga0123355_1000610210	3300009826	Termite Gut	VEQIQREFVALPGGAIRRVYSIDLGDGTVALGDYQAWLASRAARCSCGKICQGSGRTCGAPECIARL*
Ga0123355_105835072	3300009826	Termite Gut	MEPIQREFVALPGGLIRRVYSIDAGDGTVVLGDYQAWLASRAARCSCGKICRGSGRTCGAPECIARL*
Ga0126380_117340941	3300010043	Tropical Forest Soil	FVAMPGGVLKRVYTIDEADGSAALGDYQAWLTSRAARCSCGNVCRGSGRTCGAAECIARLAHEEGF*
Ga0126373_100127995	3300010048	Tropical Forest Soil	MDPIQREYVALPGGAIRRVFSIDQDDGTVVLGDYQAWIASRAARCSCGNVCRGSGQTCGAPECIARL*
Ga0126373_100189434	3300010048	Tropical Forest Soil	MALIPREFVALRGGALKRVYSVEQADGSVALGDHHAWLASRAARCSCGSVCRGSGRTCGQPECITRLATV*
Ga0126373_100606114	3300010048	Tropical Forest Soil	MALIPREFVALPGGGIKRVYSVEQPDGTLALGDHEAWLAGRAARCSCGQVCRGSGRTCGQRACIARLASI*
Ga0126373_101849573	3300010048	Tropical Forest Soil	MELIHREFVAQRGGALKRVYSVEQADGSFALGDHEAWLASRAARCSCGQVCRGSGRTCGQPACIARLGSI*
Ga0126373_105741182	3300010048	Tropical Forest Soil	MELIPREYVALPGGGLKRVYTVVAADGSVVLGDHGAWLASRAKRCACGTVCLGSGQTCGRPACIAKLARG*
Ga0126373_108259611	3300010048	Tropical Forest Soil	TPFIGDNKSVDPIQREYVALPGGVLRRVYSISQGDGTVALGDYQAWIDSRAARCSCGKVCRGSGRTCGAPECIARL*
Ga0123356_139362642	3300010049	Termite Gut	GGAIRRVYSIDRGDGTIVLGDHQAWLDSRAARCSCGQICRGSGRTCGAPECITRLQHK*
Ga0126378_126179431	3300010361	Tropical Forest Soil	VDSIQREYVALPGGALRRVYSIDRDDGTVALGDYQAWLASRAARCSCGKVCRGSGRTCGAPECIARL*
Ga0126378_133384032	3300010361	Tropical Forest Soil	GGAIKRVYSLIAADGSVVLGDHGAWLASRAQRCGCGAVCLGSGRTCGREECIARLDGG*
Ga0126379_101749402	3300010366	Tropical Forest Soil	VDPIQREYVALPGGSIRRVYSIDQGDGTVVLGDYSAWLASRAARCSCGKVCRGSGRTCGAPECIARL*
Ga0126379_108961681	3300010366	Tropical Forest Soil	MELIHREFVAQRGGALKRVYSVEQADGSFALGDHEAWLASRAARCSCGQVCRGSGRTC
Ga0126379_122885892	3300010366	Tropical Forest Soil	MSDRAALLIGQNRKMDSIQREYVALPGGAIRRVYSIDQGDGTVALGDYQAWLASRAARCSCGKVC
Ga0126381_1001475963	3300010376	Tropical Forest Soil	MTLIPREYIALPGGAIKRVYSVEQPDGTLGLGDHEAWLASRAARCSCGRVCRGSGRTCGQSECIARLATL*
Ga0126381_1010359662	3300010376	Tropical Forest Soil	MELIPREYVALPGGGLKRVYTVVAADGSVVLGDHGAWLASRAKRCACGTVCLGSGQTCGRPACIAKLAGSG*
Ga0126381_1013687532	3300010376	Tropical Forest Soil	VDPIQREYVAMPGGGIRRVYSIDLDDGSVVLGDYQAWLASRAARCSCGKVCRGSGRTCGAPECIDRL*
Ga0126381_1014826782	3300010376	Tropical Forest Soil	VELIPREYVAMRGGVLKRVYSVTQPDGSIMLGDHEAWLASRAARCSCGRVCRGNGRTCGEPECIARLSPAASSP*
Ga0126350_122088951	3300010880	Boreal Forest Soil	MELIPREYVALPGGALKRVYTVVAADGSVVLGDHGAWLASRAKRCACGSVCLGSGQTCGRTECIAKLANA*
Ga0126369_135576841	3300012971	Tropical Forest Soil	PIQREYVALPGGVLRRVYSISQGDGTVALGDYQAWIDSRAARCSCGKVCRGSGRTCGAPECIARL*
Ga0187812_12666902	3300017821	Freshwater Sediment	MLQREYVSLPGGGVRRVYSIERADGSILLADHEAWLASRAARCACGKVCRGSGRSCGDPECIKQLNKC
Ga0187807_10627563	3300017926	Freshwater Sediment	VVDAIPREYIALPGGTIRQVYSIERSDGTIALGDYQAWVASRAARCACGRVCRGSGRTCGETECITRLSAC
Ga0187807_10896852	3300017926	Freshwater Sediment	MALIPREYIALPGGAIKRVYSVEQADGSLALGGHEAWLASRAVRCSCGRVCRGSGRTCGQSECILRL
Ga0187806_10101801	3300017928	Freshwater Sediment	QREYVSLPGGGVRRVYSIERADGSILLADHEAWLASRAARCACGKVCRGSGRSCGDPECIKQLNKC
Ga0187806_11770921	3300017928	Freshwater Sediment	GGGIKRVYSLELGDGTIVLGDQRAWLASRAARCACGNVCLGTGRTCGNRACIARLSYT
Ga0187814_100865182	3300017932	Freshwater Sediment	MALIPREYIALPGGAIKRVYSVEQADGSLALGGHEAWLASRAVRCSCGRVCRGSGRTCGQSECIVRLASV
Ga0187801_100692252	3300017933	Freshwater Sediment	MLQREYVSLPGGGVRRVYSIELADGSILLADHEAWLASRAARCACGKVCRGSGRSCGDPECIKQLNKC
Ga0187808_100102353	3300017942	Freshwater Sediment	VDLIPREYVALRGGVLKRVYSVTQPDGSIVLGDHEAWLASRAARCSCGRVCRGNGRTCGEAECIARLGATTSSP
Ga0187808_101174012	3300017942	Freshwater Sediment	VDPIQREYVALPGGAIRRVYSIDQGDGTVTLGDYQAWLASRAARCSCGKVCRGSGRTCGAPECIARL
Ga0187808_104752922	3300017942	Freshwater Sediment	APPVPHTEGMELIPRERVALPGGGVKPGYSLAPGDGTIVLGDQRAWLASRAARCACGNVCLGTGRTCGNRACIARLSYT
Ga0187879_102161442	3300017946	Peatland	EYVALRGGVLKRVYSVEQPDGTVMLGDHGAWLASRAAHCSCGSVCRGSGRTCGEPECIARLDSD
Ga0187817_111156312	3300017955	Freshwater Sediment	SHTGGMDLIPREYVALPGGGIKRVYSLELGDGTIVLGDQRAWLASRAARCACGNVCLGTGRTCGNRACIARLSYT
Ga0187783_100067247	3300017970	Tropical Peatland	VIAREYIALPGGGIRQVYSIDRGDGSVALGDHRAWLASRAARCACGAVCLGSGRTCGAPECISRLDHC
Ga0187783_100089127	3300017970	Tropical Peatland	MELIPREYIALPGGALRRVYSLPTADGGLALGDHNAWLASRAARCSCGAVCRGSGRTCGDPECISRLASLSPKTGMSA
Ga0187783_101290252	3300017970	Tropical Peatland	MELIPCEYIALPGGALRRVYSVPAADGGLALGDHNAWLASRAARCSCGAICRGSGRTCGDSECIARLAGLSPKP
Ga0187783_103170332	3300017970	Tropical Peatland	VEAIPREYIALPGGVIRQVYSIERSDGTVTLGDYQAWLASRAARCACGRVCRGSGRTCGAPECISRLDGR
Ga0187783_104581441	3300017970	Tropical Peatland	VELIPREYVAMRGGVLKRVYSVTQPDGSIGLCDHEAWLASRAARCSCGKVCRGNGRTCGEPECIARLGLPAG
Ga0187783_111908131	3300017970	Tropical Peatland	MELIPREYVAMRGGTVKRVYSVAMADGSIALTEYSAWLSSRAARCSCGNICLGSGRTCGNTACIARLE
Ga0187783_114070481	3300017970	Tropical Peatland	GAHTRGMELIPHEYVALPGGAVRRVYSVLLADGSIMLADYSAWLASRAARCSCGSVCLGSGRTCGRPECIARLGQP
Ga0187781_110392752	3300017972	Tropical Peatland	GDRTLKMVHTGVVDAIPREYIALPGGTIRQVYSIEHSDGTVALGDYQAWLASRAVHCACGNVSLGSGRTCGEPECIKRLGAS
Ga0187805_103761312	3300018007	Freshwater Sediment	LSHTGGMDLIPREYVALPGGGIKRVYSLELGDGTIVLGDQRAWLASRAARCACGNVCLGTGRTCGNRACIARLSCT
Ga0187805_106137992	3300018007	Freshwater Sediment	AAMVPSLRDTSCMALIPREFVALPGGAIKRVYSVEQPDGTLALGDHEAWLASRAVRCSCGRVCRGSGRTCGQSECIARLAGV
Ga0187871_101769542	3300018042	Peatland	MDLIPREYVALRGGVLKRVYSVEQPDGTVMLGDHGAWLASRAAHCSCGSVCRGSGRTCGEPECIARLDSD
Ga0210399_115911172	3300020581	Soil	MVRQLSDTRGMVLIPREYMALRGGALRRVYSLEQSDGTLALGDHEAWLNSRAVRCSCGQVCRGSGRTCGQPECISRLVSA
Ga0210395_103094871	3300020582	Soil	MALIPREYVALPGGALKRVYSIEQADGSLALSDHEAWLASRAARCSCGRVCCGRGRTCGQPDCIARLASV
Ga0210401_102015371	3300020583	Soil	VDLIPREYVAMRGGVLKRVYSVTQPDGSIALGDHEAWLASRAAHCSCGRVCRGNGRTCGEPECIARLGATTSSP
Ga0210400_105204652	3300021170	Soil	MALIPREYVALPGGALKRVYSLEQADGSLALGDHEAWLASRAARCSCGRVCCGRGRTCGQPDCIARLATV
Ga0210400_105323192	3300021170	Soil	MELIPREYVALPGGGLKRVYSVVAADGSVALGDHGTWLASRAHRCACGSVCLGSGQTCGRAECIAALAR
Ga0210408_103409721	3300021178	Soil	MALIPREYVALPGGALKRVYSVEQADGSLALGDHEAWLASRAARCSCGRVCCGRGRTCGQPDCIARLASV
Ga0210388_116190541	3300021181	Soil	MEVIPREYVALPGGGIKRVYSVELPDGSVALGDHEVWLASRAARCACGSVCLGSGRTCGRPECITRLQTA
Ga0210393_105557781	3300021401	Soil	MELIPREYVALPGGALKRVYTVVAADGSVVLSDHGAWLASRAKRCACGSVCLGSGQTCGRTECIALLACR
Ga0210393_106599351	3300021401	Soil	PTAALRDLSDTRGMALIPREYVALPGGALKRVYSLEQADGSLALGDHEAWLASRAARCSCGRVCCGRGRTCGQPDCIARLATV
Ga0210385_104334102	3300021402	Soil	MELIPREYVALPGGALKRVYSVETADGTIALGDHNHWLAARAARCSCGNVCLGSGRTCGQPDCIERLGSSVAS
Ga0210385_107659881	3300021402	Soil	LPGGGLKRVYSVVETDGSVALGDHGAWLASRAKRCACGSVCLGSGQTCGRTECIAQLGCR
Ga0210385_111813182	3300021402	Soil	IRREDVALRGGVRKRVYSVEQPDGTVMLGDHGAWLASRAARCSCGNVCRGSGRTCGEPACIARLDSD
Ga0210397_108043652	3300021403	Soil	MELIPREYVALPGGALKRVYTVVAADGSVVLSDHGAWLASRAKRCACGSVCLGSGQTCGRTECIAKLANV
Ga0210389_103033262	3300021404	Soil	MELIPREYVALPGGGLKRVYSVVETDGSLALGDHGAWLASRAKRCACGSVCLGSGQTCGRTECIAQLACGQRAR
Ga0210389_104391812	3300021404	Soil	MALIPREYVALPGGAIKRVYSVEHPDGSVVLGDHEAWLASRASRCSCGSVCRGSGRTCGQPECIARLASV
Ga0210386_108846662	3300021406	Soil	MELIPREYVALPGGALKRVYSVETADGTIALGDHNHWLAARAARCACGSVCRGSGRTCGNPECIERLGRGATS
Ga0210383_111689691	3300021407	Soil	APVVRPAGHTRRMELIPREYVALPGGALKRVYTVVAADGSVVLSDHGAWLASRAKRCACGSVCLGSGQTCGRTECIAKLANV
Ga0210398_106804972	3300021477	Soil	MEVIPREYVALPGGGIKRVYSVELPDGSVALGDHEVWLASRAARCSCGSVCLGSGRTCGRSECIARLQTA
Ga0210402_102610281	3300021478	Soil	VPRLAAMVSSLRDTSCMALIPREYVALPGGAIKRVYSVEQPDGTLALGDHVAWLASRAVRCSCGHVCRGSGRTCGQPECITRLARV
Ga0210402_118527812	3300021478	Soil	SPYSALGRLVLVPRLAAMVSSLRDTSCMALIPREYVALPGGAIKRVYSVEQPDGTLALGDHVAWLASRAVRCSCGSVCRGSGRTCGQTECISRLTSV
Ga0210409_109463912	3300021559	Soil	MALIPREYVALPGGALKRVYSVEQDDGSLALGDHEAWLASRAARCSCGRVCCGRGRTCGQPDCIARLASV
Ga0126371_100060367	3300021560	Tropical Forest Soil	MSDRAALLIGQNRKMDSIQREYVALPGGAIRRVYSIDQGDGTVALGDYQAWLASRAARCSCGKVCRGSGRTCGAPECIARL
Ga0126371_109384752	3300021560	Tropical Forest Soil	LLDAVVWRLRDTSCMTLIPREYIALPGGAIKRVYSVEQPDGTLGLGDHEAWLASRAARCSCGRVCRGSGRTCGQSECIARLATL
Ga0126371_110724862	3300021560	Tropical Forest Soil	VDPIQREYVALPGGVLRRVYSISQGDGTVALGDYQAWIDSRAARCSCGKVCRGSGRTCGAPECIARL
Ga0126371_120281381	3300021560	Tropical Forest Soil	MTLIPREYIALPGGAIKRVYSVEQPDGTLGLGDHEAWLASRAARCSCGRICRGSGRTCGQSECIARLTTL
Ga0207646_102283532	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MALIPREYMALPGGGIKRVYSVEMADGSVALGDHEAWLASRAARCSCGRLCRGSGRTCGLPECIARLARV
Ga0209169_102067771	3300027879	Soil	MELIHREYVALRGGVLKRVYSVELDDGQVVLSDHESWLAARAARCSCGRVCLGSGRTCGSAECVARLRTA
Ga0209275_103325511	3300027884	Soil	MELIHREYVALRGGVLKRVYSVELDDGQVVLSDHESWLAARAARCSCGRVCLGSGRTCGAAECVARLSGP
Ga0209380_105753021	3300027889	Soil	SDTRGMALIPREYVALPGGALKRVYSIEQADGSLALSDHEAWLASRAARCSCGRVCCGRGRTCGQPDCIARLASV
Ga0209006_101161501	3300027908	Forest Soil	MELIPREYVALPGGGLKRVYSLVGADGSVILGDHGAWLASRAKRCACGSVCLGSGQTCGSSDCIANLASA
Ga0302232_101301452	3300028789	Palsa	MDLIPREYVALRGGVLKRVYSVEQPDGTVMLGDHGAWLASRAARCSCGNVCRGSGRTCGEPACIARLDSD
Ga0308309_108259211	3300028906	Soil	MVLIPREYIALPGGAIKRVYSLEQGDGSLALGDHEAWLASRAARCSCGRVCRGSGRTCGQPECIALLATV
Ga0210291_110248712	3300030626	Soil	MELIPREYVALPGGGLKRVYSVEDAEGNLALGDHGSWLASRANRCSCGNVCLGSGRTCGDPECIARLAGS
Ga0170824_1155494082	3300031231	Forest Soil	MALIPREYIALPGGAIKRVYSLEQTDGSLALGDHEAWLASRAVRCSCGHVCRGSGRTCGQPECITRL
Ga0302324_1035734232	3300031236	Palsa	ALPGGGLKRVYSVQEADGSVALGDHNAWLASRAARCSCGSVCRGSGRTCGNPECIAKLTGISAKTA
Ga0170819_176883651	3300031469	Forest Soil	MALIPREYVALPGGTIKRVYSVERPDGSVVLGDHESWLASRAARCSCGNICRGSGRTCGQPEC
Ga0310686_1119014192	3300031708	Soil	MILIPREYIALPGGAIKRVYSLEQGDGSLALGDHEAWLASRAARCSCGRVCRGSGRTCGQPECIARLATV
Ga0310686_1124360722	3300031708	Soil	MEVIPREYVALPGGGIKRVYSVELPDGSVALGDHEVWLASRAARCACGSVCLGSGRTCGRPECIARLQTA
Ga0310686_1184822795	3300031708	Soil	MELIPREYVALPGGALKRVYSVETADGTIALGDHNHWLAARAARCSCGNVCLGSGRTCGQPDCIERLGSVAS
Ga0335079_101325762	3300032783	Soil	MELIPREYVALPGGGLKRVYTLLAADGSSALGDHSAWLASRANRCACGSVCLGSGQTCGGTECIARLTGS
Ga0335074_1000833910	3300032895	Soil	VELIQREYVAMPGGVLKRVYSVTQPDGSIRLCDHEAWLASRAARCACGKVCRGSGRTCGDPECIAGLGSAS
Ga0335074_100112515	3300032895	Soil	MELIPREYVALRGGVLKRVYSVEMPDGTVVLGDHVAWLESRAARCSCGKVCRGSGQTCGDAECIAALGAAR
Ga0335074_101069254	3300032895	Soil	VELIPREYVALRGGVLKRVYSVTQPDGSIVLGDHETWLASRAARCSCGRVCRGNGRTCGEPECIARLGTTTSSQ
Ga0335074_101069582	3300032895	Soil	VELIQREYVAMPGGVLKRVYSVPQPDGSVVLGDHEAWLASRAKRCSCGNVCRGSGRTCGSPECIARLRPRA
Ga0335074_101227932	3300032895	Soil	VDAIGREYIALPGGGIRQVYSIHRGDGSVALGDHRAWLASRAARCACGAVCLGSGRTCGAPECISKLDRC
Ga0335074_102317221	3300032895	Soil	VELIPREYVALRGGVLKRVYSVAQPDGSIVLGDHETWLASRAARCSCGRVCRGNGRTCGEAECIARLGATTSSQ
Ga0335074_102808643	3300032895	Soil	EEVHLIPREYVAMRGGVLKRVYSITQPDGSILLADHEAWLASRAARCSCGRVCRGNGRTCGEPECIARLGTTTSSP
Ga0335074_103932691	3300032895	Soil	VELIPREYVALRGGVLKRVYSIEQPDGSVLLSDHETWLASRAARCSCGRVCRGSGRTCGEPECIDRLQHPQAS
Ga0335074_104495982	3300032895	Soil	MEVIPREYIALPGGALKRVYSVTAADGSPALGDHNAWLASRAERCSCGAVCRGSGRTCGDPECIARLAD
Ga0335074_112921292	3300032895	Soil	VVDEIPREYVALRGGVIRRVYSVEQPDGTVLLGDYQAWLASRAARCSCGKVCRGSGRTCGAPECIARLGAAWPGEFRRAAE
Ga0335075_1000404114	3300032896	Soil	VDLIPREYVALRGGVLKRVYSLTQPDGSIVLGDHEAWLASRAARCSCGRVCRGNGRTCGEAACIARLGAAISSP
Ga0335075_104169052	3300032896	Soil	VDLIPREYVALRGGVLKRVYSVTQPDGSIVLGDHEAWLASRAARCSCGRVCRGNGRTCGEADCIARLGATTSSP
Ga0335075_110937111	3300032896	Soil	GALKRVYSLELGDGRLGLGDHEAWLASRAARCSCGRVCLGSGRTCGRAECVAALG
Ga0335072_100054333	3300032898	Soil	LIPREYVALRGGVLKRVYSLTQPDGSIVLGDHEAWLASRAARCSCGRVCRGNGRTCGEAACIARLGAAISSP
Ga0335072_100208898	3300032898	Soil	VHLIPREYVAMRGGVLKRVYSITQPDGSILLADHEAWLASRAARCSCGRVCRGNGRTCGEPECIARLGTTTSSP
Ga0335072_103092931	3300032898	Soil	GGALKRVYSLELGDGQLGLGDHEAWLASRAARCSCGRVCLGSGRTCGRSECVAALG
Ga0335072_112613852	3300032898	Soil	VQRVGHTKVVDEIPREYVALRGGVIRRVYSVEQPDGTVLLGDYQAWLASRAARCSCGKVCRGSGRTCGAPECIARLGAAWPGEFRRAAE
Ga0335072_116160471	3300032898	Soil	VEQLPREYVALPGGALKRVYSLELGDGRLGLGDHEAWLASRAARCSCGRVCLGSGRTCGRAECVAALG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077541

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences