Metagenome / Metatranscriptome Family F077548

Basic Information
Family ID	F077548
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	38 residues
Representative Sequence	GDEIVVGSYKALRTLKPESSVKVDNSAPKKQDDQQS
Number of Associated Samples	101
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.86 %
% of genes near scaffold ends (potentially truncated)	96.58 %
% of genes from short scaffolds (< 2000 bps)	89.74 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Most Common Taxonomy
Group	Unclassified (58.120 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (31.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.974 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00005	ABC_tran	84.62
PF00282	Pyridoxal_deC	5.98
PF06271	RDD	5.13
PF02146	SIR2	0.85
PF01960	ArgJ	0.85
PF08402	TOBE_2	0.85
PF00515	TPR_1	0.85
PF12704	MacB_PCD	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	5.98
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	5.13
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1364	Glutamate N-acetyltransferase (ornithine transacetylase)	Amino acid transport and metabolism [E]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
All Organisms	root	All Organisms	41.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
cellular organisms	root	All Organisms → cellular organisms	41.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.24 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.53 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.53 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.85 %
Rhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax	0.85 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.85 %
Rhodoferax saidenbachensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax saidenbachensis	0.85 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003352\|JGI26345J50200_1039882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	527	Open in IMG/M
3300004080\|Ga0062385_11208728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	517	Open in IMG/M
3300004092\|Ga0062389_100196277	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1976	Open in IMG/M
3300005546\|Ga0070696_101025006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	691	Open in IMG/M
3300005569\|Ga0066705_10802949	Not Available	561	Open in IMG/M
3300005575\|Ga0066702_10398099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	840	Open in IMG/M
3300005602\|Ga0070762_10473012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	818	Open in IMG/M
3300005602\|Ga0070762_10634894	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	712	Open in IMG/M
3300005602\|Ga0070762_11247669	Not Available	515	Open in IMG/M
3300006050\|Ga0075028_101055280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	508	Open in IMG/M
3300006086\|Ga0075019_10962313	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	550	Open in IMG/M
3300006176\|Ga0070765_100187144	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300006804\|Ga0079221_10517473	Not Available	779	Open in IMG/M
3300006806\|Ga0079220_11883564	Not Available	530	Open in IMG/M
3300006854\|Ga0075425_102271208	Not Available	603	Open in IMG/M
3300006893\|Ga0073928_11016421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	564	Open in IMG/M
3300007258\|Ga0099793_10098301	Not Available	1352	Open in IMG/M
3300009090\|Ga0099827_11238032	Not Available	649	Open in IMG/M
3300009624\|Ga0116105_1163118	Not Available	597	Open in IMG/M
3300009792\|Ga0126374_10152236	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300010048\|Ga0126373_13109377	Not Available	517	Open in IMG/M
3300010360\|Ga0126372_11530389	Not Available	704	Open in IMG/M
3300010376\|Ga0126381_100038401	All Organisms → cellular organisms → Bacteria	5786	Open in IMG/M
3300010379\|Ga0136449_102768462	Not Available	693	Open in IMG/M
3300010379\|Ga0136449_104126954	Not Available	540	Open in IMG/M
3300010858\|Ga0126345_1268443	Not Available	608	Open in IMG/M
3300011120\|Ga0150983_10578839	Not Available	1102	Open in IMG/M
3300011120\|Ga0150983_10938986	Not Available	675	Open in IMG/M
3300012205\|Ga0137362_10299545	Not Available	1392	Open in IMG/M
3300012361\|Ga0137360_10942937	Not Available	744	Open in IMG/M
3300012362\|Ga0137361_10507611	Not Available	1107	Open in IMG/M
3300012389\|Ga0134040_1304919	Not Available	1225	Open in IMG/M
3300012685\|Ga0137397_10338053	Not Available	1122	Open in IMG/M
3300012918\|Ga0137396_10170508	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300012948\|Ga0126375_10686448	Not Available	795	Open in IMG/M
3300012964\|Ga0153916_11306830	Not Available	803	Open in IMG/M
3300012971\|Ga0126369_10695386	Not Available	1094	Open in IMG/M
3300014169\|Ga0181531_10060985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2214	Open in IMG/M
3300015053\|Ga0137405_1035021	Not Available	731	Open in IMG/M
3300015053\|Ga0137405_1277248	Not Available	736	Open in IMG/M
3300015054\|Ga0137420_1005267	Not Available	738	Open in IMG/M
3300015054\|Ga0137420_1336760	All Organisms → cellular organisms → Bacteria	3361	Open in IMG/M
3300015054\|Ga0137420_1477225	All Organisms → cellular organisms → Bacteria → Acidobacteria	5309	Open in IMG/M
3300015168\|Ga0167631_1053268	Not Available	664	Open in IMG/M
3300015241\|Ga0137418_10354518	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300015372\|Ga0132256_102731664	Not Available	593	Open in IMG/M
3300016270\|Ga0182036_10192413	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300016294\|Ga0182041_11121431	Not Available	715	Open in IMG/M
3300017928\|Ga0187806_1107285	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300017932\|Ga0187814_10069830	All Organisms → cellular organisms → Bacteria → Acidobacteria	1289	Open in IMG/M
3300017961\|Ga0187778_10160689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1420	Open in IMG/M
3300017975\|Ga0187782_10047160	All Organisms → cellular organisms → Bacteria	3137	Open in IMG/M
3300018088\|Ga0187771_10752960	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300018431\|Ga0066655_10081888	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300020579\|Ga0210407_10232024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1436	Open in IMG/M
3300020581\|Ga0210399_11370149	Not Available	554	Open in IMG/M
3300020582\|Ga0210395_10702293	Not Available	756	Open in IMG/M
3300020583\|Ga0210401_11071678	Not Available	664	Open in IMG/M
3300021088\|Ga0210404_10426851	Not Available	743	Open in IMG/M
3300021168\|Ga0210406_10563190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	894	Open in IMG/M
3300021170\|Ga0210400_10802841	Not Available	771	Open in IMG/M
3300021171\|Ga0210405_10697755	Not Available	784	Open in IMG/M
3300021180\|Ga0210396_10320077	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300021180\|Ga0210396_10669249	Not Available	898	Open in IMG/M
3300021181\|Ga0210388_11060962	Not Available	693	Open in IMG/M
3300021405\|Ga0210387_11297335	Not Available	629	Open in IMG/M
3300021432\|Ga0210384_11611097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	555	Open in IMG/M
3300021475\|Ga0210392_10038184	All Organisms → cellular organisms → Bacteria	2879	Open in IMG/M
3300021479\|Ga0210410_10166706	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300021479\|Ga0210410_10875333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	785	Open in IMG/M
3300021479\|Ga0210410_11435472	Not Available	583	Open in IMG/M
3300021559\|Ga0210409_10205514	All Organisms → cellular organisms → Bacteria	1792	Open in IMG/M
3300023056\|Ga0233357_1037779	Not Available	610	Open in IMG/M
3300023250\|Ga0224544_1019376	Not Available	938	Open in IMG/M
3300025905\|Ga0207685_10113095	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300025905\|Ga0207685_10344441	Not Available	750	Open in IMG/M
3300025915\|Ga0207693_11283949	Not Available	548	Open in IMG/M
3300026335\|Ga0209804_1028720	All Organisms → cellular organisms → Bacteria	2833	Open in IMG/M
3300026354\|Ga0257180_1011130	Not Available	1081	Open in IMG/M
3300026469\|Ga0257169_1026989	Not Available	843	Open in IMG/M
3300026498\|Ga0257156_1081177	Not Available	673	Open in IMG/M
3300026551\|Ga0209648_10220602	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300026551\|Ga0209648_10533703	Not Available	662	Open in IMG/M
3300027034\|Ga0209730_1019626	Not Available	719	Open in IMG/M
3300027104\|Ga0208095_1002616	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300027439\|Ga0209332_1101912	Not Available	514	Open in IMG/M
3300027603\|Ga0209331_1160926	Not Available	529	Open in IMG/M
3300027729\|Ga0209248_10241761	Not Available	527	Open in IMG/M
3300027846\|Ga0209180_10496006	Not Available	684	Open in IMG/M
3300027875\|Ga0209283_10582305	Not Available	711	Open in IMG/M
3300027882\|Ga0209590_10010885	All Organisms → cellular organisms → Bacteria	4253	Open in IMG/M
3300027898\|Ga0209067_10005033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax saidenbachensis	7378	Open in IMG/M
3300027902\|Ga0209048_10261131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1229	Open in IMG/M
3300028047\|Ga0209526_10090415	All Organisms → cellular organisms → Bacteria	2156	Open in IMG/M
3300028145\|Ga0247663_1018983	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300028380\|Ga0268265_11257701	Not Available	739	Open in IMG/M
3300028747\|Ga0302219_10237032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	706	Open in IMG/M
3300028780\|Ga0302225_10464449	Not Available	592	Open in IMG/M
3300028800\|Ga0265338_10450771	Not Available	911	Open in IMG/M
3300029636\|Ga0222749_10340449	Not Available	783	Open in IMG/M
3300031128\|Ga0170823_10888933	Not Available	871	Open in IMG/M
3300031545\|Ga0318541_10029767	All Organisms → cellular organisms → Bacteria	2696	Open in IMG/M
3300031719\|Ga0306917_11475488	Not Available	524	Open in IMG/M
3300031720\|Ga0307469_10172433	Not Available	1652	Open in IMG/M
3300031720\|Ga0307469_10438153	Not Available	1127	Open in IMG/M
3300031720\|Ga0307469_10911916	Not Available	815	Open in IMG/M
3300031720\|Ga0307469_12223606	Not Available	534	Open in IMG/M
3300031754\|Ga0307475_10598877	Not Available	882	Open in IMG/M
3300031896\|Ga0318551_10892351	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300032035\|Ga0310911_10704403	Not Available	585	Open in IMG/M
3300032160\|Ga0311301_12423128	Not Available	591	Open in IMG/M
3300032174\|Ga0307470_10184500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1316	Open in IMG/M
3300032261\|Ga0306920_102504978	Not Available	710	Open in IMG/M
3300032828\|Ga0335080_10589230	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300032955\|Ga0335076_10203916	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300032955\|Ga0335076_10269300	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.58%
Host-Associated	Host-Associated	3.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.62%
Aquatic	Environmental → Aquatic	11.97%
Plants	Host-Associated → Plants	3.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.05%
Freshwater	Environmental → Aquatic → Freshwater	8.55%
Sediment	Environmental → Aquatic → Sediment	2.56%
Peat	Environmental → Terrestrial → Peat	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.25%
Loam	Environmental → Terrestrial → Soil → Loam	12.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.71%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.71%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.13%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.13%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.56%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.71%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003352	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26345J50200_10398822	3300003352	Bog Forest Soil	TKGLQVGDEIVVGSYKALRTLKPEASVKIDNSAPKKQQDDQQS*
Ga0062385_112087281	3300004080	Bog Forest Soil	KGLQVGDEIVVGSYKALRTLKPEASVKIDNTAPKKQQDDQQS*
Ga0062389_1001962773	3300004092	Bog Forest Soil	KGLQVGDEIVVGSYKALRTLKPEASVKIDNSAPKKQQDDQQS*
Ga0070696_1010250062	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LQPGDEIVVGSYKALRTLKPEAAVKVDNSAPKKADDQQS*
Ga0066705_108029491	3300005569	Soil	GDEIVIGSYKALRTLKPEASVKVDNSAPKKPDDSQS*
Ga0066702_103980991	3300005575	Soil	QGDEIVVGSYKALRTLKPEANVKIDNSAPKKPEDNQS*
Ga0070762_104730122	3300005602	Soil	QKGDEIVVGSYKALRTLKPESSVKVDNSAPKKAASDDQSS*
Ga0070762_106348941	3300005602	Soil	QKGDEIVVGSYKALRTLKPEASVKVDNSAPKKTEPDDQSS*
Ga0070762_112476691	3300005602	Soil	VVGSYKALRTLKPEASVKVDNSAPKKPASDDQSS*
Ga0075028_1010552802	3300006050	Watersheds	TKGLQAGDEIVVGSYKALRTLKPEATVKVDNTAPKKIEEKE*
Ga0075019_109623131	3300006086	Watersheds	TKGLQVGDEIVVGSYKALRTLKPEASVKIDNTAPKKQQDDQQS*
Ga0070765_1001871441	3300006176	Soil	QKGDEIVVGSYKALRTLKPESSVKVDNSAPKKTESDDDKSS*
Ga0079221_105174731	3300006804	Agricultural Soil	KGDEIVVGSYKALRTLKPESSVKVDNSAPKKTESDDQSS*
Ga0079220_118835641	3300006806	Agricultural Soil	EIVVGSYKALRTLKPESQVKVDNSAPKKQDDQQS*
Ga0075425_1022712081	3300006854	Populus Rhizosphere	LQPGDEIVVGSYKALRTLKPEAPIKVDNSAPKKTDDQQS*
Ga0073928_110164211	3300006893	Iron-Sulfur Acid Spring	QQGDEIVVGSYKALRTLKPESNVKIDNSAPKKPEENQS*
Ga0099793_100983011	3300007258	Vadose Zone Soil	KGLQSGDEIVVGSYKALRTLKPESSVKIDNSAPKKPEDNQS*
Ga0099827_112380321	3300009090	Vadose Zone Soil	NDEIITGSYKALRTLRPNATIKVDNKAPKKPEDEKS*
Ga0116105_11631181	3300009624	Peatland	KGLQAGDEIVIGSYKALRTLKPEASVKVDNTAPKKPDDQQS*
Ga0126374_101522363	3300009792	Tropical Forest Soil	EIVTGSYKALRTLKPEAMIKIDNSAPKKQEDQQS*
Ga0126373_131093772	3300010048	Tropical Forest Soil	DGEEIVVGSYKALRTLKPEAAVKVDNSAPKKTEETP*
Ga0126372_115303891	3300010360	Tropical Forest Soil	EIVIGSYKALRTLKPEAQVKVDNSAPKSQEDQQS*
Ga0126381_1000384019	3300010376	Tropical Forest Soil	LQPGDEIVIGSYKALRTLKPEAQIKVDNSAPKKQDDQQS*
Ga0136449_1027684622	3300010379	Peatlands Soil	AESDEIITGCYKVLRTLRDGSSVKVDNTPPKKEES*
Ga0136449_1041269541	3300010379	Peatlands Soil	KAGDEIVVGSYKALRTLKPESQVKVDNSAPKKQDDQQS*
Ga0126345_12684431	3300010858	Boreal Forest Soil	DIEITKGLQAGDEIVVGSYKALRTLKPEASVKVDNTAPKKIEEKE*
Ga0150983_105788391	3300011120	Forest Soil	EIVVGSYKALRTLKPESQVKVDNSAPKKQEDQQS*
Ga0150983_109389862	3300011120	Forest Soil	DEIVVGSYKALRTLKPESQVKVDNSAPKKQDDQQS*
Ga0137362_102995452	3300012205	Vadose Zone Soil	DEIVVGSYKALRTLKPEASVKVDNSAPKKPEDSQS*
Ga0137360_109429372	3300012361	Vadose Zone Soil	DEIVLGSYKALRTLKPESSVKVDNTAPKKTEDQNN*
Ga0137361_105076111	3300012362	Vadose Zone Soil	PGDEIVTGSYKALRTLKPESDVKVDNSAPKKPEDQQS*
Ga0134040_13049191	3300012389	Grasslands Soil	EIVIGSYKALRTLKPEAQVKVDNSAPKKQEDQQS*
Ga0137397_103380531	3300012685	Vadose Zone Soil	GDEIVVGSYKALRTLKPEAAIKVDNSAPKKTDDQQS*
Ga0137396_101705081	3300012918	Vadose Zone Soil	PGDEIVVGSYKALRTLKPESQVKVDNSAPKKQDDQQG*
Ga0126375_106864481	3300012948	Tropical Forest Soil	DEIVIGSYKALRTLKPEAQVKVDNSAPKKQEDQQS*
Ga0153916_113068301	3300012964	Freshwater Wetlands	EIVIGSYKALRTLKPEASVKVDNTPPKKTEDQQS*
Ga0126369_106953863	3300012971	Tropical Forest Soil	GLQAGDEIVVGSYKALRTLKPEAQIKIDNSAPKKTEDQQS*
Ga0181531_100609851	3300014169	Bog	IVVGSYKALRTLKPEASVKVDNSAPKKTEPDDQSS*
Ga0137405_10350211	3300015053	Vadose Zone Soil	PGDEIVVGSYKALRTLKPEAQIKVDNSAPKKTDDQQS*
Ga0137405_12772481	3300015053	Vadose Zone Soil	SRATGDEIVVGSYKALRTLKPEAQIKVDNSAPKKTDDQQS*
Ga0137420_10052672	3300015054	Vadose Zone Soil	DEIVVGSYKALRTLKPESQIKVDNSAPKKQDDQQS*
Ga0137420_13367607	3300015054	Vadose Zone Soil	LQPGDEIVVGSYKALRTLKPEAAIKVDNTAPKKIEEKE*
Ga0137420_14772255	3300015054	Vadose Zone Soil	LQSGDEIVVGSYKALRTLKPESQVKWTNSAPKKQDDQQS*
Ga0167631_10532682	3300015168	Glacier Forefield Soil	LQPGDEIVVGSYKALRTLKPASSVKVDNTPPKKPEEEGQS*
Ga0137418_103545183	3300015241	Vadose Zone Soil	PGDEIVVGSYKALRTLKPEAAIKVDNTAPKKIEEKE*
Ga0132256_1027316641	3300015372	Arabidopsis Rhizosphere	LQAGDEIVVGSYKALRTLKPEAQIKIDNSAPKKTDDQQS*
Ga0182036_101924131	3300016270	Soil	LQPGDEIVVGSYKALRTLKPEAPIKVDNSAPKKTEDEQS
Ga0182041_111214312	3300016294	Soil	DEIVIGSYKALRTLKPEAQVKVDNSAPKSQEDQQS
Ga0187806_11072851	3300017928	Freshwater Sediment	LQPGDEIVVGSYKVLRTLKNDAPVKIDNTVKKQEES
Ga0187814_100698301	3300017932	Freshwater Sediment	GVQEGDEIVVGSYKALRTLKPEASIKIDNSAPKKTEETSE
Ga0187778_101606891	3300017961	Tropical Peatland	QEGEEIVVGSYKALRTLKPEASVKVDNSAAKKVEEQQ
Ga0187782_100471601	3300017975	Tropical Peatland	GLQSGDEIVVGSYKALRTLKPEASVKVDNTVQKPTEESQ
Ga0187769_100261711	3300018086	Tropical Peatland	GDLIVTGSYKALRTLKPGAAVKIDNSTPKTEESSSSSSS
Ga0187771_107529601	3300018088	Tropical Peatland	LQEGDEIVVGSYKALRTLKPEAPVKVDNSVQKKTEESQ
Ga0066655_100818883	3300018431	Grasslands Soil	PGDEIVVGSYKALRTLKPESQVKVDNSTPKKQEDQQS
Ga0210407_102320241	3300020579	Soil	ITKGLQPGDEIVVGSYKALRTLKPEADIKIDNTAPKKPEDQQS
Ga0210399_113701491	3300020581	Soil	DEIVVGSYKALRTLKPEASVKVDNSAPKKTEDQQS
Ga0210395_107022931	3300020582	Soil	GDEIVVGSYKALRTLKPESSVKVDNSAPKKPDDQQS
Ga0210401_110716781	3300020583	Soil	DEIVVGSYKALRTLKPESPVKVDNSAPKKQDDQQS
Ga0210404_104268512	3300021088	Soil	LQVGDEIVVGSYKALRTLKPEASVKIDNSAPKKQQDDQQS
Ga0210406_105631901	3300021168	Soil	ITKGLQNGDEIVVGSYKALRTLKPESSVKIDNSAPKKPEDTQS
Ga0210400_108028412	3300021170	Soil	DEIVVGSYKALRTLKPEASVKVDNSAPKKPEDSQS
Ga0210405_106977551	3300021171	Soil	LQPGDEIVVGSYKALRTLKPESPVKVDNSAPKKQDDQQS
Ga0210396_103200773	3300021180	Soil	VTKGLQVGDEIVVGSYKALRTLKPEASVKIDNSAPKKQQDDQQS
Ga0210396_106692492	3300021180	Soil	EITKGLQPGDEIVVGSYKALRTLKPASSVKVDNTVPKKPEEEGQS
Ga0210388_110609622	3300021181	Soil	TKGLQACDEIVVGSYKALRTLKPEASVKVDNAAPKKTEDSQ
Ga0210387_112973351	3300021405	Soil	GLQQGDEIVVGSYKALRTLKPEASVKVDNTAPKKTEDQQN
Ga0210384_116110971	3300021432	Soil	EGDQIVTGSYKALRTLKPGTKLKVDNTVTARDETSGS
Ga0210392_100381841	3300021475	Soil	VTKGLQVGDEIVVGSYKALRTLKPEASVKIDNTAPKKQQDDQQS
Ga0210410_101667061	3300021479	Soil	KGLQVGDEIVVGSYKALRTLKPEASVKIDNSAPKKQDDQQS
Ga0210410_108753331	3300021479	Soil	GVTDIEITKGLQAGDEIVVGSYKALRTLKPEAAIKVDNTAPKKIEEKE
Ga0210410_114354722	3300021479	Soil	GDEIVVGSYKALRTLKPESSVKVDNSAPKKQDDQQS
Ga0210409_102055141	3300021559	Soil	PGDEIVVGSYKALRTLKPQSAIKVDNSAPKKMDDQQS
Ga0233357_10377792	3300023056	Soil	IEITKGLQPGDEIVVGSYKALRTLKPASSVKVDNTVPKKPEDEGQS
Ga0224544_10193761	3300023250	Soil	QAGDQIITGSYKALRTLKPNSPIKVDNSAPKVPADTDQS
Ga0207685_101130951	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	KGLQAGDEIVIGSYKALRTLKPEAAVKVDNTAPKKIEEKE
Ga0207685_103444412	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	EVTDGLQTGDEIVVGSYKALRTLKPEAQIKVDNTAPKKPDDQQS
Ga0207693_112839491	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	KGLQAGDEIVVGSYKALRTLKPEATVKIDNSAPKKTEDQQ
Ga0209804_10287201	3300026335	Soil	PGDEIVVGSYKALRTLKPESQVKVDNSAPKKQDDQQS
Ga0257180_10111301	3300026354	Soil	QPGDEIVVGSYKALRTLKPEAQIKVDNSAPKKTDDQQS
Ga0257169_10269891	3300026469	Soil	LKPGDEIVVGSYKALRTLKPESQIKVDNSAPKKQDDQQS
Ga0257156_10811772	3300026498	Soil	QPGDEIVVGSYKALRTLKPEAPVKVDNSAPKKTDDQQS
Ga0209648_102206023	3300026551	Grasslands Soil	AGDEIVVGSYKALRTLKPESQVKVDNSAPKKQDDQQS
Ga0209648_105337032	3300026551	Grasslands Soil	GDEIVVGSYKALRTLKPESQVKVDNSAPKKQDDQQS
Ga0209730_10196261	3300027034	Forest Soil	GDEIVVGSYKALRTLKPEASIKIDNSAPKKPEDNQS
Ga0208095_10026162	3300027104	Forest Soil	GLQEGEEIVIGSYKALRTLKPGASIKVDNTVPKREELTS
Ga0209332_11019122	3300027439	Forest Soil	TKGLQNGDEIVVGSYKALRTLKPESSVKIDNSAPKKPEDNQS
Ga0209331_11609262	3300027603	Forest Soil	QGDEIVVGSYKALRTLKPESNVKIDNSAPKKPEENQS
Ga0209248_102417612	3300027729	Bog Forest Soil	DEIVVGSYKALRTLKPEASVKVDNTAPKKTEDQQN
Ga0209180_104960061	3300027846	Vadose Zone Soil	QPGDEIVVGNYKALRTLKPEAPIKVDNSAPKKTDDQQS
Ga0209283_105823051	3300027875	Vadose Zone Soil	LQPGDEIVVGSYKALRTLKPESQVKVDNSAPKKQDDQQS
Ga0209590_100108851	3300027882	Vadose Zone Soil	NDEIITGSYKALRTLRPNATIKVDNKAPKKPEDEKS
Ga0209067_100050338	3300027898	Watersheds	GDEIVVGSYKALRTLKPEASVKIDNTAPKKQQDDQQS
Ga0209048_102611313	3300027902	Freshwater Lake Sediment	GDEIVVGSYKALRTLKPDSTVKIDNSAPKKADDQQ
Ga0209526_100904153	3300028047	Forest Soil	LQTGDEIVVGSYKALRTLKPQASVKIDNSAPKKPEDNQS
Ga0247663_10189833	3300028145	Soil	SGDEIVIGSYKALRTLKPEAPIKVDNSAPKKTEDQQS
Ga0268265_112577012	3300028380	Switchgrass Rhizosphere	GDEIITGSYKILRTLKTDTQIKVDNSSPDKFEKKELL
Ga0302219_102370321	3300028747	Palsa	DIEIANGIREGDVIVIGSFKALRTLKPGASVKVDNTTPKPEDSSSSS
Ga0302225_104644492	3300028780	Palsa	AAGDEIVIGSYKALRTLKPQASVKVDNSAPKKPDDQQS
Ga0265338_104507712	3300028800	Rhizosphere	KGLQPGDEIVVGSYKALRTLKPDSTVKIDNSAPKKTDEQQP
Ga0222749_103404492	3300029636	Soil	VGDEIVVGSYKALRTLKPEASVKIDNSAPKKQDDQQS
Ga0170823_108889332	3300031128	Forest Soil	QVGDEIVVGSYKALRTLKPEASVKIDNTAPKKQQDDQQS
Ga0318541_100297671	3300031545	Soil	DGEDIVVGSYKALRTLKPEAAVKVDNSAPKKTEETQ
Ga0306917_114754881	3300031719	Soil	GLQEGEEIVIGSYKALRTLKPGTSIKVDNTVPKREELTS
Ga0307469_101724331	3300031720	Hardwood Forest Soil	IEVTDGLQPGDEIVVGSYKALRTLKPEAPIKVDNTAPKKTDDQQS
Ga0307469_104381533	3300031720	Hardwood Forest Soil	EITKGLQPGDEIVIGSYKALRTLKPEAAIKVDNTAPKKIEEKE
Ga0307469_109119162	3300031720	Hardwood Forest Soil	DEIVIGSYKALRTLKPEAPIKVDNSAPKKTEDQQS
Ga0307469_122236062	3300031720	Hardwood Forest Soil	PGDEIVVGSYKALRTLKPESQIKVDNSAPKKQDDQQS
Ga0307475_105988771	3300031754	Hardwood Forest Soil	DEIVVGSYKALRTLKPEAQVKVDNSAPKKQDDQQS
Ga0318551_108923511	3300031896	Soil	GDEIVVGSYKALRTLKPDASVKVDNTVKKTEETNN
Ga0310911_107044031	3300032035	Soil	QPGDEIVIGSYKALRTLKPEAQVKVDNSAPKSQEDQQS
Ga0311301_124231282	3300032160	Peatlands Soil	KAGDEIVVGSYKALRTLKPESQVKVDNSAPKKQDDQQS
Ga0307470_101845003	3300032174	Hardwood Forest Soil	VTKGLQPGDEIVVGSYKALRTLKPNAQIKVDNTAPKKTDDQQS
Ga0306920_1025049781	3300032261	Soil	GLQAGDEIVVGSYKALRTLKPEASVKIDNSAPKKTEDQQ
Ga0335080_105892302	3300032828	Soil	LQQGDEIVVGSYKALRTLKPESSVKVDNSAPKKTDDQQN
Ga0335076_102039161	3300032955	Soil	QKGDEIVVGSYKALRTLKPEASVKVDNSAPKKTASDDQSS
Ga0335076_102693003	3300032955	Soil	LQVGDEIVTGSYKALRTLKPEASVKIDNSAPKKQDDQQS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077548

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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