Metagenome / Metatranscriptome Family F077557

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077557
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	57 residues
Representative Sequence	MKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPVGIHRVIQP
Number of Associated Samples	83
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.00 %
% of genes near scaffold ends (potentially truncated)	18.80 %
% of genes from short scaffolds (< 2000 bps)	56.41 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.812 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.752 % of family members)
Environment Ontology (ENVO)	Unclassified (31.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.504 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.06% β-sheet: 0.00% Coil/Unstructured: 72.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13620	CarboxypepD_reg	15.38
PF02129	Peptidase_S15	11.97
PF00486	Trans_reg_C	1.71
PF11838	ERAP1_C	1.71
PF10503	Esterase_PHB	0.85
PF03601	Cons_hypoth698	0.85
PF00006	ATP-synt_ab	0.85
PF00588	SpoU_methylase	0.85
PF01391	Collagen	0.85
PF02065	Melibiase	0.85
PF00293	NUDIX	0.85
PF00266	Aminotran_5	0.85
PF01844	HNH	0.85
PF13646	HEAT_2	0.85
PF05448	AXE1	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.85
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.85
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.85
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.85
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.85
COG3345	Alpha-galactosidase	Carbohydrate transport and metabolism [G]	0.85
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.81 %
Unclassified	root	N/A	34.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.81 %
Unclassified	root	N/A	34.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.81 %
Unclassified	root	N/A	34.19 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	47.86 %
Unclassified	root	N/A	34.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	41.03 %
Unclassified	root	N/A	34.19 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.69 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	4.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	37.61 %
Unclassified	root	N/A	34.19 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	7.69 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	4.27 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	2.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	37.61 %
Unclassified	root	N/A	34.19 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	7.69 %
Capsulimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales	4.27 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.19 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	7.69 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	5.13 %
Capsulimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae	4.27 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2.56 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	1.71 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.19 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	7.69 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	5.13 %
Capsulimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas	4.27 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2.56 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1.71 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.19 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	7.69 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	5.13 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	4.27 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2.56 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1.71 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10003098	All Organisms → cellular organisms → Bacteria	12045	Open in IMG/M
3300000567\|JGI12270J11330_10012219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5636	Open in IMG/M
3300000567\|JGI12270J11330_10073138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1678	Open in IMG/M
3300001593\|JGI12635J15846_10006327	All Organisms → cellular organisms → Bacteria → Acidobacteria	10162	Open in IMG/M
3300004080\|Ga0062385_10761583	Not Available	630	Open in IMG/M
3300005534\|Ga0070735_10006010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9964	Open in IMG/M
3300005538\|Ga0070731_10081250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	2149	Open in IMG/M
3300005541\|Ga0070733_10077980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	2094	Open in IMG/M
3300005541\|Ga0070733_10256805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	1150	Open in IMG/M
3300005541\|Ga0070733_10994888	Not Available	563	Open in IMG/M
3300005591\|Ga0070761_10050903	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	2331	Open in IMG/M
3300005591\|Ga0070761_10053536	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2273	Open in IMG/M
3300005591\|Ga0070761_10625155	Not Available	671	Open in IMG/M
3300005602\|Ga0070762_10034417	Not Available	2729	Open in IMG/M
3300005610\|Ga0070763_10197714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1071	Open in IMG/M
3300006176\|Ga0070765_100019590	All Organisms → cellular organisms → Bacteria	5020	Open in IMG/M
3300006176\|Ga0070765_100847846	Not Available	864	Open in IMG/M
3300009520\|Ga0116214_1412410	Not Available	528	Open in IMG/M
3300009521\|Ga0116222_1078924	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1421	Open in IMG/M
3300009523\|Ga0116221_1011193	All Organisms → cellular organisms → Bacteria	5171	Open in IMG/M
3300009523\|Ga0116221_1038550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2300	Open in IMG/M
3300009623\|Ga0116133_1006427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	2945	Open in IMG/M
3300009624\|Ga0116105_1061522	Not Available	881	Open in IMG/M
3300009665\|Ga0116135_1225401	Not Available	722	Open in IMG/M
3300009760\|Ga0116131_1159011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	646	Open in IMG/M
3300011120\|Ga0150983_16725947	Not Available	626	Open in IMG/M
3300017822\|Ga0187802_10062974	Not Available	1368	Open in IMG/M
3300017933\|Ga0187801_10391930	Not Available	576	Open in IMG/M
3300017940\|Ga0187853_10173930	Not Available	1020	Open in IMG/M
3300017943\|Ga0187819_10784906	Not Available	535	Open in IMG/M
3300017946\|Ga0187879_10086420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1807	Open in IMG/M
3300017955\|Ga0187817_10995763	Not Available	537	Open in IMG/M
3300017966\|Ga0187776_10048491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	2411	Open in IMG/M
3300017972\|Ga0187781_10052656	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2800	Open in IMG/M
3300017995\|Ga0187816_10125065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1108	Open in IMG/M
3300018006\|Ga0187804_10296354	Not Available	704	Open in IMG/M
3300018022\|Ga0187864_10081636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1720	Open in IMG/M
3300018035\|Ga0187875_10017691	All Organisms → cellular organisms → Bacteria → Acidobacteria	4371	Open in IMG/M
3300018040\|Ga0187862_10689264	Not Available	598	Open in IMG/M
3300018042\|Ga0187871_10009902	All Organisms → cellular organisms → Bacteria → Acidobacteria	6586	Open in IMG/M
3300018085\|Ga0187772_10129216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	1654	Open in IMG/M
3300019258\|Ga0181504_1524908	Not Available	506	Open in IMG/M
3300020579\|Ga0210407_10003460	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	12808	Open in IMG/M
3300020579\|Ga0210407_10356715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1144	Open in IMG/M
3300020580\|Ga0210403_10004533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11954	Open in IMG/M
3300020580\|Ga0210403_10809323	Not Available	744	Open in IMG/M
3300020580\|Ga0210403_11437227	Not Available	521	Open in IMG/M
3300020581\|Ga0210399_10003039	All Organisms → cellular organisms → Bacteria → Acidobacteria	13042	Open in IMG/M
3300020581\|Ga0210399_10071498	Not Available	2809	Open in IMG/M
3300020582\|Ga0210395_10038463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	3507	Open in IMG/M
3300020582\|Ga0210395_10043264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3296	Open in IMG/M
3300020582\|Ga0210395_10496727	Not Available	918	Open in IMG/M
3300020583\|Ga0210401_10006691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11660	Open in IMG/M
3300020583\|Ga0210401_10013340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7985	Open in IMG/M
3300020583\|Ga0210401_10074677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	3191	Open in IMG/M
3300020583\|Ga0210401_11208495	Not Available	614	Open in IMG/M
3300021168\|Ga0210406_10528669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	929	Open in IMG/M
3300021168\|Ga0210406_10974092	Not Available	633	Open in IMG/M
3300021171\|Ga0210405_10002127	All Organisms → cellular organisms → Bacteria	20937	Open in IMG/M
3300021171\|Ga0210405_10004038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13960	Open in IMG/M
3300021171\|Ga0210405_10115136	Not Available	2124	Open in IMG/M
3300021171\|Ga0210405_10200669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1581	Open in IMG/M
3300021171\|Ga0210405_10716696	Not Available	772	Open in IMG/M
3300021171\|Ga0210405_10871771	Not Available	686	Open in IMG/M
3300021178\|Ga0210408_10078288	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	2591	Open in IMG/M
3300021180\|Ga0210396_10254086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1562	Open in IMG/M
3300021181\|Ga0210388_10325104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1352	Open in IMG/M
3300021181\|Ga0210388_11013639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	711	Open in IMG/M
3300021401\|Ga0210393_10009893	All Organisms → cellular organisms → Bacteria → Acidobacteria	7444	Open in IMG/M
3300021402\|Ga0210385_10994988	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	644	Open in IMG/M
3300021402\|Ga0210385_11439935	Not Available	527	Open in IMG/M
3300021403\|Ga0210397_10057654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2510	Open in IMG/M
3300021405\|Ga0210387_11620188	Not Available	550	Open in IMG/M
3300021406\|Ga0210386_10266302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1464	Open in IMG/M
3300021406\|Ga0210386_10650980	Not Available	909	Open in IMG/M
3300021407\|Ga0210383_10010062	All Organisms → cellular organisms → Bacteria	8076	Open in IMG/M
3300021407\|Ga0210383_10188367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1762	Open in IMG/M
3300021420\|Ga0210394_10033454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	4597	Open in IMG/M
3300021420\|Ga0210394_10400362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1208	Open in IMG/M
3300021433\|Ga0210391_10116894	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2100	Open in IMG/M
3300021433\|Ga0210391_11498740	Not Available	517	Open in IMG/M
3300021474\|Ga0210390_10003907	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12701	Open in IMG/M
3300021475\|Ga0210392_10341978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1081	Open in IMG/M
3300021478\|Ga0210402_10027676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4889	Open in IMG/M
3300021478\|Ga0210402_11551603	Not Available	589	Open in IMG/M
3300023030\|Ga0224561_1018043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	599	Open in IMG/M
3300027370\|Ga0209010_1000024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	94897	Open in IMG/M
3300027497\|Ga0208199_1072051	Not Available	724	Open in IMG/M
3300027604\|Ga0208324_1144860	Not Available	648	Open in IMG/M
3300027609\|Ga0209221_1003441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	3942	Open in IMG/M
3300027853\|Ga0209274_10382050	Not Available	727	Open in IMG/M
3300027854\|Ga0209517_10012364	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9095	Open in IMG/M
3300027854\|Ga0209517_10233301	Not Available	1113	Open in IMG/M
3300027867\|Ga0209167_10015494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	3609	Open in IMG/M
3300027867\|Ga0209167_10167851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1158	Open in IMG/M
3300027869\|Ga0209579_10076727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	1768	Open in IMG/M
3300027889\|Ga0209380_10160355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1316	Open in IMG/M
3300027986\|Ga0209168_10001636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17208	Open in IMG/M
3300028015\|Ga0265353_1030319	Not Available	541	Open in IMG/M
3300028037\|Ga0265349_1009609	Not Available	843	Open in IMG/M
3300028906\|Ga0308309_10948355	Not Available	746	Open in IMG/M
3300030659\|Ga0316363_10010647	All Organisms → cellular organisms → Bacteria	5490	Open in IMG/M
3300030878\|Ga0265770_1004994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1818	Open in IMG/M
3300031090\|Ga0265760_10000132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18931	Open in IMG/M
3300031090\|Ga0265760_10003916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4303	Open in IMG/M
3300031708\|Ga0310686_106169629	All Organisms → cellular organisms → Bacteria	6904	Open in IMG/M
3300031754\|Ga0307475_10213986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1542	Open in IMG/M
3300031823\|Ga0307478_10055720	All Organisms → cellular organisms → Bacteria → Acidobacteria	2945	Open in IMG/M
3300032180\|Ga0307471_100336024	Not Available	1615	Open in IMG/M
3300032770\|Ga0335085_10784258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1051	Open in IMG/M
3300032782\|Ga0335082_11078970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	669	Open in IMG/M
3300032783\|Ga0335079_10180423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	2353	Open in IMG/M
3300032783\|Ga0335079_10516076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1272	Open in IMG/M
3300032829\|Ga0335070_10082798	All Organisms → cellular organisms → Bacteria → Acidobacteria	3408	Open in IMG/M
3300032898\|Ga0335072_10210796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	2289	Open in IMG/M
3300033134\|Ga0335073_11485662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	655	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.62%
Aquatic	Environmental → Aquatic	15.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.62%
Freshwater	Environmental → Aquatic → Freshwater	15.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	11.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.55%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.13%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028037	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_1000309810	3300000567	Peatlands Soil	MRFVVEVPDQEVFEAAERPEDLAREIAEVITSEIFDFSSVAVTPERGSL*
JGI12270J11330_100122193	3300000567	Peatlands Soil	MKFIVEIPDQEVFEAAEHPEDLACEIAEVIAKEIFGFTSVTVVPQQRVKNTLTVIQS*
JGI12270J11330_100731382	3300000567	Peatlands Soil	MRFVVEVPDCEVLDAAEKPEDLACEIAEVIAKEIFDFSFVTVVPQHQA*
JGI12635J15846_100063277	3300001593	Forest Soil	MKFIVEIPDGEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIRLSR*
Ga0062385_107615831	3300004080	Bog Forest Soil	MRFIVEIPDYEVFEAAELPEDLACEIAEVIANEIFGFSSVTVIPQQRSIGLSQAIRS*
Ga0070735_100060102	3300005534	Surface Soil	MKFVVEVPDAEVFQAAERPEDLAEEIAEVIANEIFEFSSVTVIAQPGH*
Ga0070731_100812501	3300005538	Surface Soil	MKFVVEVPDAEVFQAAEKPEDLAEEIAEVIANEIFEFSSVTVIAQPGH*
Ga0070733_100779802	3300005541	Surface Soil	MKFILEIPDREVFEAAEQPEDLALEIAEVITNEIFCFSSVTVVPQQKTGGTLRVVQA*
Ga0070733_102568052	3300005541	Surface Soil	MKFMVEIPDLEVFEAAKQPEDLASEITELIASEILGFSSLAVFAQQGPVGIHRGIQP*
Ga0070733_109948881	3300005541	Surface Soil	MRFIVEIPDREVFEAAEQPEDLACEIAEVIASEIFEFSSVTVIPQQRSIGFSQVIRS*
Ga0070761_100509032	3300005591	Soil	MRFIVEIPDREVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIGLSQVIRS*
Ga0070761_100535363	3300005591	Soil	MKFIVDIPDCEVFEAAERPEDLACEIAEVIASEIFEFSSVIVIPQPRTARLSQAIQP*
Ga0070761_106251551	3300005591	Soil	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPIGIHRVIRP*
Ga0070762_100344172	3300005602	Soil	MKFIVEIPDREVFDAAEQPEDLACEIAEVIASEIFSFSTVTVIPLQPPEGTLPTFRS*
Ga0070763_101977142	3300005610	Soil	MPSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVSLQQGPVGIHRVIQP*
Ga0070765_1000195904	3300006176	Soil	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVSLQQGPVGIHRVIQP*
Ga0070765_1008478462	3300006176	Soil	MRFIVEIPDCEVFEAAEKPEDLACEIAEVIASEIFGFSSVTVIPQQRPIGLAQAIRS*
Ga0116214_14124102	3300009520	Peatlands Soil	MKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQPRSVGIPRVIQP*
Ga0116222_10789242	3300009521	Peatlands Soil	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQPRSVGIPRVIQP*
Ga0116221_10111931	3300009523	Peatlands Soil	GGMRFVVEVPDCEVLDAAEKPEDLACEIAEVIAKEIFDFSFVTVVPQHQA*
Ga0116221_10385502	3300009523	Peatlands Soil	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTAIPQPRSVGIPRVIQP*
Ga0116133_10064272	3300009623	Peatland	MRFIVEIPDCEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIGLSQAIRS*
Ga0116105_10615221	3300009624	Peatland	MKFIVEIPDGEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIGLSG*
Ga0116135_12254012	3300009665	Peatland	MRFIVEIPDYEVFEAAEQPEDLACEIAEVIANEIFGFSSVTVIPQQRSIGLSQAIRS*
Ga0116131_11590112	3300009760	Peatland	VFEAAEQPEDLACEIAEVIANEIFSFSAVTVIPQQRCDGTVQVVRA*
Ga0150983_167259471	3300011120	Forest Soil	MKFIVEIPDGEVFEAAEQPEDLACEIAEVIANEIFGFSSVTVIPQHAVRS*
Ga0187802_100629742	3300017822	Freshwater Sediment	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPVGIHRVIQP
Ga0187801_103919301	3300017933	Freshwater Sediment	MPSIVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVIPQQGPVGIHRVIQP
Ga0187853_101739302	3300017940	Peatland	MRFIVEIPDCEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIGLSQAIRS
Ga0187819_107849061	3300017943	Freshwater Sediment	MVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVIPQQGPVGIHRVIQ
Ga0187879_100864202	3300017946	Peatland	MRFIVEIPDYEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIGLSQAIRS
Ga0187817_109957632	3300017955	Freshwater Sediment	VVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVIPQQGPVGIHRVIQP
Ga0187776_100484912	3300017966	Tropical Peatland	MKFVVEVPDRDVYEAAEKPEDLALEIAEVIANEIFGFSSLTMVPQHAAQ
Ga0187781_100526562	3300017972	Tropical Peatland	MKFVVEVPDGEVYEAAEKPEDLALEIAEVIANEIFGFSSVTVVTQSNGVIGRS
Ga0187816_101250652	3300017995	Freshwater Sediment	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVIPQQGPVGIHRVIQP
Ga0187804_102963542	3300018006	Freshwater Sediment	MVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPVGIHRVIQ
Ga0187864_100816362	3300018022	Peatland	MKFIVEIPDREVFEAAEQPEDLACEIAEVIANEIFGFSTVTVIPQQRSDGTLK
Ga0187875_100176913	3300018035	Peatland	MRFIVEIPDCEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIGFSQVIRW
Ga0187862_106892641	3300018040	Peatland	MRFIVEIPDCEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRS
Ga0187871_100099022	3300018042	Peatland	MRFIVEIPDYEVFEAAEQPEDLACEIAEVIANEIFGFSSVTVIPQQRSIGLSQAIRS
Ga0187772_101292162	3300018085	Tropical Peatland	MKFVVEVPDGEVFQAAEKPEDLAKEIAEVIANEIFEFSSVIVITESGQ
Ga0181504_15249082	3300019258	Peatland	FIVEIPDCEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIGLSQAIRS
Ga0210407_100034608	3300020579	Soil	MKFIVEIPDGEVFEAAEQPEDLACEIAEVIANEIFGFSSVTVIPQHAVRS
Ga0210407_103567152	3300020579	Soil	MLSLAVSMKFILEIPDIEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQRSVGIHGVIQP
Ga0210403_100045332	3300020580	Soil	VSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPVGIQRVIQP
Ga0210403_108093231	3300020580	Soil	MRFIVEIPDREVFEAAEQPEDLACEIAEVIASEIFEFSSVTVIPQQRSIGFSQVIRS
Ga0210403_114372271	3300020580	Soil	MKFIVDIPDCEVFEAAERPEDLACEIAEVIASEIFEFSSVIVIPQPRTARLSQAIQP
Ga0210399_1000303912	3300020581	Soil	MKFIVEIPDREVFEAAEEPEDLACELAEVIANEIFGFTSVTAIPQQAAVDTRQIIRSPIQDSGIIR
Ga0210399_100714983	3300020581	Soil	MLPLVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPVGIQRVIQP
Ga0210395_100384632	3300020582	Soil	MPSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVSLQQGPVGIHRVIQP
Ga0210395_100432642	3300020582	Soil	MLSLAVSMKFILKIPDIEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQRSVGIHGVIQP
Ga0210395_104967272	3300020582	Soil	MRFIVEIPDCEVFEAAEQPEDLACEIAEVIANEIFGFSSVTVIPQQRSIGLAQAIRS
Ga0210401_100066913	3300020583	Soil	MKFILEIPDREVFEAAEQPEDLALEIAEVITNEIFCFSSVTVVPQQKTGGTLRVVRA
Ga0210401_100133403	3300020583	Soil	MKFVVEVPDREVFEAAEQPEDLAQEIAEVITSEIFSFSFVAVTPEKGSIAFSDVLHTRVV
Ga0210401_100746773	3300020583	Soil	MLSLAVSMKFILEIPDIEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQRS
Ga0210401_112084951	3300020583	Soil	WQCSMKFIVEIPDREVFDAAEQPEDLACEIAEVIASEIFSFSTVTVIPLQPPEGTLPTFR
Ga0210406_105286691	3300021168	Soil	RPASTYQKRMLSLAVSMKFILEIPDIEVFEAAEQPEDLACEIAELIASEIFEFSSVTVIPQQRSVGIHGVIQP
Ga0210406_109740921	3300021168	Soil	MSFIIEIPDREVFEAAEQPEDLAAEITEVIANEIFGFSSVTVVP
Ga0210405_1000212718	3300021171	Soil	MKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPVGIHRVIQP
Ga0210405_100040383	3300021171	Soil	MKFIVEIPDCEVFDAAEQPEDLACEIAELIATEIFSFSTVTVIPLQPPEGTLPTFRS
Ga0210405_101151364	3300021171	Soil	MKFIVEIPDREVFDAAEQPEDLACEIAEVIASEIFSFSTVTVIPLQPPEGTLPTFRS
Ga0210405_102006692	3300021171	Soil	MKFIVEIPDCEVFEAAEEPEDLACEIAEVIANEIFGFSSVIVIPQQAAVGTSQVIRCPIQDSGIIG
Ga0210405_107166962	3300021171	Soil	MLSLAVSMKFILEIPDIEVFEAAEQPEDLACEIAELIASEIFGFSSVTVILQQRSVGIHGVIQP
Ga0210405_108717712	3300021171	Soil	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVILQQGPVGIHRVIQP
Ga0210408_100782882	3300021178	Soil	MKFIVEIPDCEVFEAAEEPEDLACEIAEVIANEIFGFSSVIVIPQQAAVGTSQVIRFPIQDSGIIG
Ga0210396_102540862	3300021180	Soil	MKFILEIPDREVFEAAEQPEDLALEIAEVITNEIFCFSSVTVVPQQKTGGTLRVVQA
Ga0210388_103251042	3300021181	Soil	MKFIVEIPDREVFEAAEQPEDLACEIAEVITNEIFGFSSVSVIAQQVRGAVELVRS
Ga0210388_110136392	3300021181	Soil	MRFIVEIPDCEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRPIGLAQAIRS
Ga0210393_100098933	3300021401	Soil	MLSLAVSMKFILEIPDIEVFEAAEQPEDLACEIAELIASEIFEFSSVTVIPQQRSVGIHGVIQP
Ga0210385_109949881	3300021402	Soil	FILEIPDREVFEAAEQPEDLALEIAEVITNEIFCFSSVTVVPQQKTGGTLRVVQA
Ga0210385_114399352	3300021402	Soil	MVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPIGIHRVIR
Ga0210397_100576542	3300021403	Soil	MPSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVILQQGPVGIHRVIQP
Ga0210387_116201881	3300021405	Soil	MKFIVEIPDREVFEAAEQPEDLACEVAEVITNEIFGFSSVSVIAQQVRGAVEL
Ga0210386_102663022	3300021406	Soil	FILEIPDIEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQRSVGIHGVIQP
Ga0210386_106509801	3300021406	Soil	MLSLAVSMKFILEIPDIEVFEAAEQPEDLACEIAELIASEIFGFSSVTVILQ
Ga0210383_100100621	3300021407	Soil	MKFIVEIPDREVFEAAEQPEDLACEIAEVIANEIFGFSSVSVIAQQQVRGGIELVRS
Ga0210383_101883672	3300021407	Soil	MLSMVVSMKFIVEIPDPEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPIGIYQVIQP
Ga0210394_100334542	3300021420	Soil	MKFIVDIPDCEVFEAAERPEDLACEIAEVIASEIFEFSSVIVIPQPRTARVSRAIQP
Ga0210394_104003622	3300021420	Soil	MKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVILQQGPVGIHRVIQP
Ga0210391_101168943	3300021433	Soil	PDIVVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQRSVGIHGVIQP
Ga0210391_114987401	3300021433	Soil	MRFIVEIPDCEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIRLSQVIRS
Ga0210390_100039073	3300021474	Soil	MKFIVEIPDREVFEAAEHPEGLACEIAEVIANEIFGFSSITVIPQRRVSNAR
Ga0210392_103419782	3300021475	Soil	MSFIIEIPDREVFEAAEQPEDLAAEITEVIANEIFGFSSVTVVPQQRVHGTFT
Ga0210402_100276763	3300021478	Soil	MSFIIEIPDREVFEAAEQPEDLAAEITEVIANEIFGFSSVTVVPQQRVHGTLHLVQSGIRNPQIIG
Ga0210402_115516032	3300021478	Soil	MKFIVEIPDREVFEAAEQPEDLACEIAEVIANEMFGFSSVTVIPQQRVHGALRLVQS
Ga0224561_10180432	3300023030	Soil	WQRSMKFIVEIPDREVFEAAELPEDLACEIAEVIANEIFGFSSITVIPQQRVSNAR
Ga0209010_10000247	3300027370	Forest Soil	MKFIVEIPDGEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIRLSR
Ga0208199_10720512	3300027497	Peatlands Soil	MKFIVEIPDQEVFEAAEHPEDLACEIAEVIAKEIFGFTSVTVVPQQRVKNTLTVIQS
Ga0208324_11448601	3300027604	Peatlands Soil	MVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQPRSVGIPRVIQ
Ga0209221_10034413	3300027609	Forest Soil	MKFIVEIPDGEVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIELSR
Ga0209274_103820502	3300027853	Soil	MRFIVEIPDREVFEAAEQPEDLACEIAEVIASEIFGFSSVTVIPQQRSIGLSQVIRS
Ga0209517_100123645	3300027854	Peatlands Soil	MRFVVEVPDQEVFEAAERPEDLAREIAEVITSEIFDFSSVAVTPERGSL
Ga0209517_102333012	3300027854	Peatlands Soil	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQPRSVGIPRVIQP
Ga0209167_100154943	3300027867	Surface Soil	MAVSMKFIVEIPDLEVFEAAEQPEDLACEVGELIASEIFGFSSVTVIPQQWPVGIHR
Ga0209167_101678512	3300027867	Surface Soil	MKFMVEIPDLEVFEAAKQPEDLASEITELIASEILGFSSLAVFAQQGPVGIHRGIQP
Ga0209579_100767271	3300027869	Surface Soil	MKFVVEVPDAEVFQAAEKPEDLAEEIAEVIANEIFEFSSVTVIAQPGH
Ga0209380_101603552	3300027889	Soil	MRFIVEIPDCEVFEAAEKPEDLACEIAEVIANEIFGFSSVTVIPQQRSIGLAQAIRS
Ga0209168_1000163613	3300027986	Surface Soil	MKFVVEVPDAEVFQAAERPEDLAEEIAEVIANEIFEFSSVTVIAQPGH
Ga0265353_10303192	3300028015	Soil	MLPLVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVSLQQGPVGIH
Ga0265349_10096091	3300028037	Soil	MVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPIGIHRVI
Ga0308309_109483552	3300028906	Soil	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEILGFSSVTVSLQQGPVGIHRVIQP
Ga0316363_100106474	3300030659	Peatlands Soil	MRFVVEVPDCEVLDAAEKPEDLACEIAEVIAKEIFDFSFVTVVPQHQA
Ga0265770_10049942	3300030878	Soil	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPIGIYQVIQP
Ga0265760_100001323	3300031090	Soil	MLSMVVSMKFIVEIPDLEVFEAAEQPEDLACEIAELIASEIFGFSSVTVIPQQGPIGIHRVIRP
Ga0265760_100039162	3300031090	Soil	MKFIVEIPDREVFEAAEHPEDLACEIAEVIANEIFGFSSITVIPQQQVSNAR
Ga0310686_1061696296	3300031708	Soil	MKFIVEIPDCEVFDAAEQPEDLACEIAEVIASEIFSFSTVTVIPLQPPEGTLPVFRS
Ga0307474_101903281	3300031718	Hardwood Forest Soil	MKFVLEVPDREVYEAAEKPEYLALEIAELITNEIFDFSSVSVVPQRGHESDSERLLAS
Ga0307475_102139862	3300031754	Hardwood Forest Soil	MKFIVEIPDREVFQAAEHPQDLACEIAEVIANEIFGFSSVTVTPQRRDNCTLQVIRS
Ga0307478_100557201	3300031823	Hardwood Forest Soil	RSMKFIVEIPDREVFEAAEHPEGLACEIAEVIANEIFGFSSTTVIPQQRMSSAR
Ga0307471_1003360242	3300032180	Hardwood Forest Soil	MKFVVEVPDQEVFEAAERPEDLAREIAEVITNEIFVFSSVAVTPQRDSREQ
Ga0335085_107842582	3300032770	Soil	MKFVVEVPDEEVFDAAEGPEDLAGEIADLIMNEIFDFSSLTVVPQPNC
Ga0335082_110789702	3300032782	Soil	MKFVVEVPDLEVFEAAERPEDLASEIAEVITNEIFDFTSLTVVSQPSQITK
Ga0335079_101804233	3300032783	Soil	MKFVVEVPDQEVFEAAEEPEDLALEIAEVIMNEIFDFSSLTVVCQPSHATK
Ga0335079_105160762	3300032783	Soil	MKFVVEVPDQEVFEAVEKPEDLAREIAEVIANEIFDFSSIAVTPRSDSWERWGVFVGPHRVW
Ga0335070_100827981	3300032829	Soil	MKFVVEVPDQEVFEAAERPEDLATEIAEVITNEIFDFTSLTVVSQPSQIAK
Ga0335072_102107962	3300032898	Soil	MKFLVEVPDWEVYEAAEKPEDLALEIAEVIANEIFGFSSLTVVPQRGGIDRRRVAV
Ga0335073_114856622	3300033134	Soil	MKFVVEVPDQEVFEAAERPEDLATEIAEVITNEIFDFTSLTVVSQPSQLTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077557

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences