Metagenome Family F077568

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077568
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	54 residues
Representative Sequence	MGLAMIFKLGAMPYDMVERSMTTFGEEVVPRIRHVLDRDAAAYRTVAAPALHTR
Number of Associated Samples	94
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.10 %
% of genes near scaffold ends (potentially truncated)	71.79 %
% of genes from short scaffolds (< 2000 bps)	73.50 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.085 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.171 % of family members)
Environment Ontology (ENVO)	Unclassified (54.701 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.299 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.88% β-sheet: 0.00% Coil/Unstructured: 45.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01135	PCMT	15.38
PF00296	Bac_luciferase	5.98
PF16363	GDP_Man_Dehyd	5.13
PF12697	Abhydrolase_6	5.13
PF00583	Acetyltransf_1	2.56
PF00732	GMC_oxred_N	2.56
PF00248	Aldo_ket_red	1.71
PF00498	FHA	1.71
PF08240	ADH_N	1.71
PF03537	Glyco_hydro_114	1.71
PF00561	Abhydrolase_1	1.71
PF09957	VapB_antitoxin	0.85
PF00106	adh_short	0.85
PF13458	Peripla_BP_6	0.85
PF14226	DIOX_N	0.85
PF12399	BCA_ABC_TP_C	0.85
PF07859	Abhydrolase_3	0.85
PF00027	cNMP_binding	0.85
PF01609	DDE_Tnp_1	0.85
PF00589	Phage_integrase	0.85
PF06475	Glycolipid_bind	0.85
PF04828	GFA	0.85
PF00330	Aconitase	0.85
PF09339	HTH_IclR	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	15.38
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	15.38
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	15.38
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	15.38
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	5.98
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	2.56
COG2342	Endo alpha-1,4 polygalactosaminidase, GH114 family (was erroneously annotated as Cys-tRNA synthetase)	Carbohydrate transport and metabolism [G]	1.71
COG3868	Alpha-1,4 polygalactosaminidase, glycosyl hydrolase family GH114	Carbohydrate transport and metabolism [G]	1.71
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.85
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.85
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.85
COG3554	Uncharacterized conserved protein	Function unknown [S]	0.85
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.85
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.85
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.85
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.09 %
Unclassified	root	N/A	29.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.09 %
Unclassified	root	N/A	29.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.09 %
Unclassified	root	N/A	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.37 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.91 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.71 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.85 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.98 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.85 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.98 %
unclassified Reyranella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella	0.85 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.98 %
Reyranella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	0.85 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_100705187	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300004091\|Ga0062387_101675130	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300004152\|Ga0062386_101401024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300004633\|Ga0066395_10006501	All Organisms → cellular organisms → Bacteria	4138	Open in IMG/M
3300004635\|Ga0062388_101849702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	621	Open in IMG/M
3300004635\|Ga0062388_102370070	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005329\|Ga0070683_101254674	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300005434\|Ga0070709_11663758	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005436\|Ga0070713_101808918	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005555\|Ga0066692_10284573	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300006028\|Ga0070717_11282498	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300010043\|Ga0126380_10791176	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300010360\|Ga0126372_11158575	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300010361\|Ga0126378_11111607	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300010376\|Ga0126381_100529252	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300010376\|Ga0126381_100739154	Not Available	1409	Open in IMG/M
3300010376\|Ga0126381_101441560	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300010376\|Ga0126381_102732010	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300011120\|Ga0150983_12227199	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012200\|Ga0137382_11357326	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012923\|Ga0137359_10537327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300012925\|Ga0137419_11733987	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012927\|Ga0137416_10356649	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300012961\|Ga0164302_11321715	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300012971\|Ga0126369_12092754	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300012985\|Ga0164308_11210471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300012986\|Ga0164304_10242255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1204	Open in IMG/M
3300013307\|Ga0157372_13405055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300014150\|Ga0134081_10373898	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300014165\|Ga0181523_10621046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300016341\|Ga0182035_10293825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1330	Open in IMG/M
3300016357\|Ga0182032_10159363	Not Available	1678	Open in IMG/M
3300016357\|Ga0182032_11237221	Not Available	643	Open in IMG/M
3300016387\|Ga0182040_10243652	All Organisms → cellular organisms → Bacteria → Proteobacteria	1347	Open in IMG/M
3300016387\|Ga0182040_11169762	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300016445\|Ga0182038_10238321	All Organisms → cellular organisms → Bacteria → Proteobacteria	1455	Open in IMG/M
3300016445\|Ga0182038_12025965	Not Available	521	Open in IMG/M
3300021401\|Ga0210393_10071312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2742	Open in IMG/M
3300021559\|Ga0210409_11288997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300021560\|Ga0126371_10001790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18265	Open in IMG/M
3300021560\|Ga0126371_11161732	Not Available	910	Open in IMG/M
3300021560\|Ga0126371_12037137	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300025928\|Ga0207700_11077534	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300026078\|Ga0207702_11436833	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300027537\|Ga0209419_1081531	Not Available	640	Open in IMG/M
3300027795\|Ga0209139_10018950	All Organisms → cellular organisms → Bacteria	2492	Open in IMG/M
3300027824\|Ga0209040_10108131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1563	Open in IMG/M
3300027829\|Ga0209773_10408902	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031122\|Ga0170822_12620750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1018	Open in IMG/M
3300031544\|Ga0318534_10409130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	779	Open in IMG/M
3300031544\|Ga0318534_10736937	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031545\|Ga0318541_10404516	All Organisms → cellular organisms → Bacteria → Proteobacteria	763	Open in IMG/M
3300031546\|Ga0318538_10121547	Not Available	1364	Open in IMG/M
3300031640\|Ga0318555_10804943	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031668\|Ga0318542_10511038	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300031671\|Ga0307372_10300173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300031682\|Ga0318560_10028058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2639	Open in IMG/M
3300031719\|Ga0306917_10632675	Not Available	841	Open in IMG/M
3300031724\|Ga0318500_10144254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1116	Open in IMG/M
3300031744\|Ga0306918_10162305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1659	Open in IMG/M
3300031744\|Ga0306918_11090003	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031748\|Ga0318492_10428018	Not Available	698	Open in IMG/M
3300031764\|Ga0318535_10268428	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031771\|Ga0318546_10528717	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300031778\|Ga0318498_10030500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2338	Open in IMG/M
3300031779\|Ga0318566_10489767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	602	Open in IMG/M
3300031781\|Ga0318547_10387657	Not Available	856	Open in IMG/M
3300031781\|Ga0318547_10938612	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031782\|Ga0318552_10124967	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300031832\|Ga0318499_10046181	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300031832\|Ga0318499_10278162	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300031890\|Ga0306925_10119317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2821	Open in IMG/M
3300031910\|Ga0306923_11690154	Not Available	654	Open in IMG/M
3300031912\|Ga0306921_11839508	Not Available	650	Open in IMG/M
3300031912\|Ga0306921_12608899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031941\|Ga0310912_10047883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2992	Open in IMG/M
3300031941\|Ga0310912_10183533	Not Available	1594	Open in IMG/M
3300031945\|Ga0310913_11121933	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031947\|Ga0310909_10710682	Not Available	834	Open in IMG/M
3300031947\|Ga0310909_10735962	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300031954\|Ga0306926_10144386	All Organisms → cellular organisms → Bacteria → Proteobacteria	2945	Open in IMG/M
3300032001\|Ga0306922_10538199	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300032025\|Ga0318507_10101416	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300032025\|Ga0318507_10354832	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300032039\|Ga0318559_10466607	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300032039\|Ga0318559_10515244	Not Available	558	Open in IMG/M
3300032041\|Ga0318549_10232355	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300032054\|Ga0318570_10463182	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300032060\|Ga0318505_10036265	All Organisms → cellular organisms → Bacteria	2045	Open in IMG/M
3300032065\|Ga0318513_10094781	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300032066\|Ga0318514_10454396	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300032076\|Ga0306924_11553885	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300032094\|Ga0318540_10020153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2767	Open in IMG/M
3300032261\|Ga0306920_101835168	Not Available	854	Open in IMG/M
3300032805\|Ga0335078_11165588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	894	Open in IMG/M
3300033134\|Ga0335073_10323147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1840	Open in IMG/M
3300033134\|Ga0335073_11192670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300033290\|Ga0318519_10019002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3033	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.44%
Host-Associated	Host-Associated	2.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.74%
Aquatic	Environmental → Aquatic	7.69%
Plants	Host-Associated → Plants	2.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.74%
Freshwater	Environmental → Aquatic → Freshwater	7.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.69%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%
Clay	Environmental → Terrestrial → Soil → Clay	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1076898122	3300000955	Soil	VERSMTLFGEEVVPLVRHLLDGAAADPGATARALQPT*
Ga0062387_1007051872	3300004091	Bog Forest Soil	GAMPYDMVERSMTLFGEEVMPRMRHVLGRDAAASSSRAA*
Ga0062387_1016751302	3300004091	Bog Forest Soil	IFKLGAMPYDMVERSMTAFGEEVVPRIRHLLDRDASANRTAAAPALHVA*
Ga0062386_1014010241	3300004152	Bog Forest Soil	LIFKLGAMPYDMVERSMTRFGKQVVPRIRNLLSRDAAAIGAAAE*
Ga0066395_100065011	3300004633	Tropical Forest Soil	MPYDMVERSMTAFGEEVMPRIRRVLDRDAAVNHAPPAPPLRLA*
Ga0062388_1018497021	3300004635	Bog Forest Soil	MGLALIFKLGAMPYDMLERSMTRFGEEVVPRIRYVLDPDAAAIRAAAE*
Ga0062388_1023700701	3300004635	Bog Forest Soil	MGLALIFKLGAMPYDMIERSMTRFGEEVMPRIRHVLHPDAAAIRAAAE*
Ga0066684_109514351	3300005179	Soil	GAMPYDTVERSMRLFGEEVVPRIRHLLDGDCDGNPATASPALQPA*
Ga0070683_1012546742	3300005329	Corn Rhizosphere	MGLAMIFKLGAMPYDMVERSMTLFGEEVVPLVRHLLDGAAPDPGATAGALQPT*
Ga0070709_116637582	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LELMGLAMIFKLGAMPYDTVERSMRLFGEEVVPRIRHILDRDAHGDPVVASPALAAG*
Ga0070713_1018089182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MARDDLQLGAMPYDMVERSMTLFGEEVVPLVCHVPDGAAADPGATARAL
Ga0066692_102845733	3300005555	Soil	LAMIFKLGAMPYDTVERSMRLFGEEVVPRIRHLLDGDCDGNPATASPALQPA*
Ga0070717_112824982	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MARDDLQLGAMPYDMVERSMTLFGEEVVPLVCHVPDGAAADPGATARALQPT*
Ga0070712_1018280071	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVERSMTLLGEEIVPLVRHLLDGAAADPGATARALRLT*
Ga0126380_107911762	3300010043	Tropical Forest Soil	MPYDMVERSMTAFGEEVMPMIRRVLDRDAAVNHAPPAPPLRLA*
Ga0126373_108036251	3300010048	Tropical Forest Soil	MPYEMVERSMTLFGDEVVPRIRHLLDGAAAERAASAPALQPA*
Ga0134111_104335561	3300010329	Grasslands Soil	DMVERSMTLFGEEVMPRIRHLLDRDAAAAPPALRRA*
Ga0126372_111585751	3300010360	Tropical Forest Soil	LDLMGLALIFKLGAMPYDMVERSMRTFGEEVVPRIRHVLDRGAATNHAEAENR*
Ga0126378_111116072	3300010361	Tropical Forest Soil	LAMIFKLGAMPYDMVERSMTAFGEEVVPRIRDILDRDAAADHAAATPVLRIA*
Ga0126381_1005292524	3300010376	Tropical Forest Soil	GPDAVANAILRIAGQLDLMGLTLVFKLGAMPYDMVERSMIRFGEEVLPRIRAVLDRDTGATSAAAE*
Ga0126381_1007391542	3300010376	Tropical Forest Soil	AMIFKLGAMPYDMVERSMSLFGEEVVPQIRHVLGHTISVDRAAAEQAQMMA*
Ga0126381_1014415602	3300010376	Tropical Forest Soil	GLAMIFKLGAMPYDMVERSMSLFGEEVVPRIRHVLSHTITVDRAAAEQAQLMA*
Ga0126381_1027320101	3300010376	Tropical Forest Soil	EQLDLMGLALVFKLGAMPYDRVEQSMMRFGEEVMPRIRAVLGRDTAATPAAA*
Ga0126381_1044523251	3300010376	Tropical Forest Soil	TILRLASELELMGLTMIFKLGAMPYDTVKRSMALFGEAVMPRIRHVLDGDAVAAAPRAA*
Ga0150983_122271991	3300011120	Forest Soil	ALMGLALIFKLGAMPYDMVERSMTAFGEDVVPRIRPVLDRDATANFAATTPALHFA*
Ga0137382_113573262	3300012200	Vadose Zone Soil	ILELASQLDLMGLALIFKLGAMPYDMVERSMTAFGEDVVPRIRPVLDRDATVNFAATTPALHFA*
Ga0137359_105373272	3300012923	Vadose Zone Soil	ILELARQLDLMGLALIFKLGAMPYDMVERSMTAFGEDVVPRIRPVLDRDATADFAATTPALHFA*
Ga0137419_117339871	3300012925	Vadose Zone Soil	LELASQLDLMGLALIFKLGAMPYDMVERSMTAFGEDVVPRIRPVLDRDATANFAATTPALHFA*
Ga0137416_103566491	3300012927	Vadose Zone Soil	LMGLAMIFKLGAMPYDMVERSMTRFGEEVMPRIRRVLDRDAAAHHVTAAAVAAQ*
Ga0164302_113217152	3300012961	Soil	ILELASQLDLMGLALIFKLGAMPYDMVERSMTAFGEDVVPRIRPVLDRDATANFAATTPALHFA*
Ga0126369_120927541	3300012971	Tropical Forest Soil	MIFKLGAMPYDMVERSMTAFGDEVVPRIRHLLDRDAAANRAVAESAHHTLDARGAS*
Ga0164308_112104712	3300012985	Soil	LMGLAMIFKLGAMPYDMVERSMTLFGDEVVPLVRHLLDGAAADPGATARALQPT*
Ga0164304_102422551	3300012986	Soil	ALIFKLGAMPYDMVERSMTAFGEDVVPRIRPLLDRDATANFAATTPALHFA*
Ga0157372_134050552	3300013307	Corn Rhizosphere	KELDLMGLAMIFKLGAMPFDMVERSMTLFGEEVVPLVRHLLDGAAPDPGATAGALQPT*
Ga0134081_103738982	3300014150	Grasslands Soil	ETVADTIVRIAGQLELMGLAMIFKLGAMPYDTVERSMRLFGEEVVPRIRHLLDGDCDGNPATASPALQPA*
Ga0181523_106210462	3300014165	Bog	GAMPYDMVERSMTLFGEEVIPRIRRVLDRAAAVNHAATAPAPQRA*
Ga0182008_100276531	3300014497	Rhizosphere	MPYDMVERSMTLFGEEVVPLVCHVPDGAAADPGATARALQAT*
Ga0182035_102938251	3300016341	Soil	LPFDRVERSMTLFGNEVVPRIRDLLDGAGAERKPAAPALHVA
Ga0182032_101593631	3300016357	Soil	LGAMPYDMVERSMIRFGEEVVPRISAVLDRDAAAFRAAAE
Ga0182032_112372211	3300016357	Soil	KLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATANRAVPAAALRSE
Ga0182040_102436523	3300016387	Soil	AMPYDMVERSMTAFGEGVVPRIHHILDRDGAAHRPAGAAALHVA
Ga0182040_111697622	3300016387	Soil	MGLAMIFKLGAMPYDTVERSMTTFGEKVVPRIRHVLDRDAAAYRTVAAPALHTR
Ga0182037_104133502	3300016404	Soil	LRLAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATVNRAVPVAASHSE
Ga0182038_102383213	3300016445	Soil	LALIFKLGAMPYDMVERSMTAFGEGVVPRIHHILDRDGAAHRPAGAAALHVA
Ga0182038_120259652	3300016445	Soil	IFKLGAMPYDMVERSMTLFGEEVVPRIRHVLDRDAAANRAAAAPALHLV
Ga0210393_100713124	3300021401	Soil	LGMIFKLGAMPYDMVERSMTLFGEEVMPRMRHVLGRDAAASSSRAA
Ga0210409_112889972	3300021559	Soil	DLMGLALIFKLGAMPYDMVERSMTAFGEDVVPRIRPGLDRDATADFAATTPALHFA
Ga0126371_1000179010	3300021560	Tropical Forest Soil	MPYDMVERSMTAFGEEVMPRIRRVLDRDAAVNHAPPAPPLRLA
Ga0126371_111617322	3300021560	Tropical Forest Soil	MGLAMIFKLGAMPYDMVERSMSLFGEEVVPRVRHVLSHTITVDRAAAEQAQLMA
Ga0126371_120371372	3300021560	Tropical Forest Soil	LMGLALIFKLGAMPYDMVERSMTAFGEGVMPRIRAVLDRDGAANRAVAAPALQIA
Ga0207700_110775341	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MARDDLQLGAMPYDMVERSMTLFGEEVVPLVCHVPDGAAADPGATARALQPT
Ga0207702_114368332	3300026078	Corn Rhizosphere	ADTILRIAGQLELMGLAMIFKLGAMPYDTVERSMRLFGEEVVPRIRHILDRDAHGDPVVGSPALAAG
Ga0209419_10815311	3300027537	Forest Soil	LRLASQLELMGLALIFKLGTMPYDMIKRSMTAFGEQVIPRIRGVLDHDAAANRTAAAPVLRLV
Ga0209139_100189502	3300027795	Bog Forest Soil	GAMPYDMLERSMTRFGEEVVPRIRYVLDRDAAAIGAAAE
Ga0209040_101081315	3300027824	Bog Forest Soil	IFKLGAMPYDMVERSMTAFGEEVVPRIRHLLDRDASANRTAAAPALHVA
Ga0209773_104089021	3300027829	Bog Forest Soil	LMGLALIFKLGAMPYDMLERSMTRFGEEVVPRIRYVLDRDAAAIGAAAE
Ga0170822_126207501	3300031122	Forest Soil	LDLMGLAMIFKLGAMPYDMVERSMSLFGEEVVPRLRQILTRAVTVDRTTAEPSS
Ga0318534_104091302	3300031544	Soil	MGLAMIFKLGAMPYDMVERSMTAFGEEVMPRIRHVLERNADAAVVRVA
Ga0318534_107369372	3300031544	Soil	AILRLSGQLDLMGLAMIFKLGAMPYDMVERSMTAFGEEVVPRIRHLLDRDSAAERTVAAPALHTR
Ga0318541_104045161	3300031545	Soil	ILRLSSQLDLMGLAMIFKLGAMPYDIVDRSMTIFGEQVVPRIRHVLDRDAAANRAAAAPALHLV
Ga0318538_101215471	3300031546	Soil	RLAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATANRAVPAAALRSE
Ga0318573_107342871	3300031564	Soil	ANDMVILGSAQTVANAILRLAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATVNRAVPVAASHSE
Ga0318555_108049432	3300031640	Soil	LTLIFKLGAMPYDMVERSMTAFGEEVVPRIRRILDRDGAADRAAGAPALHVA
Ga0318542_105110382	3300031668	Soil	RLASQLDLMGLALIFKLGAMPYDMVERSMTLFGEEVVPRIRHVLDRDAAGRAAAAPALHI
Ga0307372_103001731	3300031671	Soil	AMPYDMVERSMTRFGAEVVPKIRHLLGPAAALHAAPEPALHAK
Ga0318560_100280583	3300031682	Soil	TVANAILRLSGQLDLMGLAMIFKLGAMPYDMVERSMTAFGEEVVPRIRHLLDRDSAAERTVAAPALHTR
Ga0306917_106326752	3300031719	Soil	MGLAMIFKLGAMPYDMVDRSMTAFGEQVVPRIRHVLDRDASANCPAAAAARHRA
Ga0318500_101442542	3300031724	Soil	SGQLDLMGLAMIFKLGAMPYDMVERSMTAFGEKVVPRIRHVLDSNAAADRTAAAPALHTR
Ga0306918_101623051	3300031744	Soil	SGQLDLMGLAMIFKLGAMPYDMVERSMTAFGEMVVPRIRHVLDSNAAADRTAASLALHTR
Ga0306918_110900031	3300031744	Soil	LIFKLGVMPYDMVERSMTLFGEEVVPKIRRLLHHTTAAPALHVA
Ga0318502_107961292	3300031747	Soil	LGSAQTVANAILRLAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATANRAVPAAALRSE
Ga0318492_104280182	3300031748	Soil	MIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATANRAVPAAALRSE
Ga0318535_102684281	3300031764	Soil	KLGAMPHDMVERSMTTFGEKVVPRIRHVLDRDAAAYRTVAAPALHTR
Ga0318546_105287172	3300031771	Soil	MGLAMIFKLGAMPYDMVDRSMTAFGEQVVPRIRHVLDRDASANCPAAAPARHRA
Ga0318498_100305003	3300031778	Soil	AMIFKLGAMPHDMVERSMTTFGEKVVPRIRHVLDRDAAAYRTVAAPTLHTR
Ga0318566_104897673	3300031779	Soil	LAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATVNRAVPVAASHSE
Ga0318547_103876571	3300031781	Soil	SRLSSQLDLMGLAMIFKLGAMPYDMVDRSMTAFGEQVVPRIRHVLDRDASANCPAAAAARHRA
Ga0318547_109386122	3300031781	Soil	AMPYDMVERSMTAFGEEVVPRIRRILDRDGAADRAAGAPALHVA
Ga0318552_101249671	3300031782	Soil	AMPYDMVERSMTAFGEEVVPRIRHLLDRDSAAERTVAAPALHTR
Ga0318529_100928972	3300031792	Soil	VILGSAQTVANALLRLAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATVNRAVPVAASHSE
Ga0318503_103213842	3300031794	Soil	AQTVANAILRLAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATVNRAVPVAASHSG
Ga0318499_100461812	3300031832	Soil	SSTLMGLAMIFKLGAMPHDMVERSMTTFGEKVVPRIRHVLDRDAAAYRTVAAPALHTR
Ga0318499_102781622	3300031832	Soil	ANTILRLSSRLDLMGLAMIFKLGAMPYDMVERSMTAFGEEVVPRIRDILDRDAAADHAAATPVLRIA
Ga0306925_101193171	3300031890	Soil	AGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATANRAVPAAALRSE
Ga0318536_100648113	3300031893	Soil	TVANAILRLAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATVNRAVPVAASHSE
Ga0318551_106617212	3300031896	Soil	MPYDMVERSMTLFGEEVVPRIRHVLDRDAAGRAAAAPALHIA
Ga0306923_116901541	3300031910	Soil	LAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATANRAVPAAALRS
Ga0306921_118395081	3300031912	Soil	GAMPYDIVDRSMTIFGEQVVPRIRHVLDRDAAANRAAAAPALHLV
Ga0306921_126088991	3300031912	Soil	GLALVFKLGALPFDRVERSMTLFGSEVVPRIRDLLDGAGAERKPAAPALHVA
Ga0310912_100478831	3300031941	Soil	LMGLAMIFKLGAMPHDTVERSMTTFGEKVVPRIRHVLDRDAAAYRTVAAPALHTR
Ga0310912_101835331	3300031941	Soil	LMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATVNRAVPVAASHSE
Ga0310913_111219331	3300031945	Soil	ETVANTILRLSSRLDLMGLAMIFKLGAMPYDMVERSMTAFGEEVVPRIRDILDRDAAADHAAATPVLRIA
Ga0310909_107106822	3300031947	Soil	LDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATANRAVPAAALRSE
Ga0310909_107359622	3300031947	Soil	GQLDLMGLAMIFKLGAMPYDMVERSMTAFGKEVVPRIRHVLDRNAAADRAVAAPALHTR
Ga0306926_101443864	3300031954	Soil	MGLALIFKLGAMPYDMVERSMTAFGEGVVPRIHHILDRDGADHRPAGAAALHVA
Ga0306922_105381992	3300032001	Soil	MGLAMIFKLGAMPYDTVERSMTTFGEKVVPRIRHVLDRDAAAYRTVTALALHTR
Ga0318507_101014161	3300032025	Soil	AILRLSGQLDLMGLAMIFELGAMPYDMVERSMTAFGEEVVPRIRHLLDRDGAAERTVAAPALHTR
Ga0318507_103548321	3300032025	Soil	MIFKLGAMPYDMVERSMTAFGEEVVPRIRDILDRDAAADHAAATPVLRIA
Ga0318559_104666071	3300032039	Soil	MGLAMIFKLGAMPYDMVERSMTTFGEEVVPRIRHVLDRDAAAYRTVAAPALHTR
Ga0318559_105152442	3300032039	Soil	AMPYDMVERSMTAFGEEVVPRIRDILDRDAAADHAAATPVLRIA
Ga0318549_102323551	3300032041	Soil	ANAILRLSGQLDLMGLAMIFKLGAMPYDMVERSMTAFGEKVVPRIRHVLDSNAAADRTAAAPALHTR
Ga0318570_104631822	3300032054	Soil	SAETVANAILRLSGQLDLMGLAMIFKLGAMPYDMVERSMTAFGEEVVPRIRHLLDRDSAAERTVAAPALHTR
Ga0318575_101559982	3300032055	Soil	ANALLRLAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATVNRAVPVAASHSE
Ga0318505_100362652	3300032060	Soil	MGLAMIFKLGAMPHDMVERSMTTFGEKVVPRIRHVLDRDAAAYRTVAAPALHTR
Ga0318510_103929021	3300032064	Soil	ADAILRLAGQLDLMGLALIFKLGAMPYDMVERSMAAFGEAVVPRIRHLLDGNAAGNRVETKPARRIA
Ga0318513_100947811	3300032065	Soil	ILRLSGQLDLMGLAMIFKLGAMPYDMVERSMTAFGEEVVPRIRHLLDRDSAAERTVAAPALHTR
Ga0318513_103646092	3300032065	Soil	AILRLAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATANRAVPAAALRSE
Ga0318514_104543961	3300032066	Soil	LMGLAMIFKLGAMPYDMVERSMTAFGEEVVPRIRDILDRDAAADHAAATPVLRIA
Ga0306924_115538851	3300032076	Soil	SQLDLMGLAMIFKLGAMPYDMVERSMTAFGKEVVPRIRHVLDRNAAADRAVAAPALHTR
Ga0318518_106581461	3300032090	Soil	VANAILRLAGQLDLMGLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATANRAVPAAALRSE
Ga0318540_100201533	3300032094	Soil	LGAMPYDMVERSMTAFGEEVVPRIRHLLDRDSAAERTVAAPALHTR
Ga0318540_102949392	3300032094	Soil	QLHLMGVAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATVNRAVPVAASHSE
Ga0306920_1018351681	3300032261	Soil	GLAMIFKLGAMPYDMVVRSMTAFGEEVVPRIHHALDRDATANRAVPAAALRSE
Ga0335078_111655883	3300032805	Soil	FKLGAMPYDMVERSMRAFGEAVVPRIRHILDRDAAGNHVTAAPSQHAA
Ga0335073_103231471	3300033134	Soil	LGAMPYDMVERSMRAFGEAVMPKLRPILDRRAAAASAVAA
Ga0335073_111926701	3300033134	Soil	MGLALIFKFGAMPYDMVERSMTAFGAEVIPRIRGVLDRAAAAPALRTA
Ga0318519_100190023	3300033290	Soil	AMIFKLGAMPHDMVERSMTTFGEKVVPRIRHVLDRDAAAYRTVAAPALHTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077568

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences