Metagenome Family F077605

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077605
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	71 residues
Representative Sequence	VHQVVTQVTAIDWPSFIEKSALRADSFLARLSDDDFQQGIAALRTPGDAINQNDAVTEEIDWFVFTRRG
Number of Associated Samples	90
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.30 %
% of genes near scaffold ends (potentially truncated)	76.07 %
% of genes from short scaffolds (< 2000 bps)	83.76 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.026 % of family members)
Environment Ontology (ENVO)	Unclassified (48.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.62% β-sheet: 10.31% Coil/Unstructured: 69.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF08241	Methyltransf_11	11.11
PF02423	OCD_Mu_crystall	8.55
PF07040	DUF1326	7.69
PF00293	NUDIX	4.27
PF00583	Acetyltransf_1	4.27
PF00528	BPD_transp_1	4.27
PF04828	GFA	2.56
PF00034	Cytochrom_C	1.71
PF04964	Flp_Fap	1.71
PF02317	Octopine_DH	1.71
PF01230	HIT	1.71
PF00929	RNase_T	0.85
PF03976	PPK2	0.85
PF08238	Sel1	0.85
PF04392	ABC_sub_bind	0.85
PF01243	Putative_PNPOx	0.85
PF00872	Transposase_mut	0.85
PF06685	DUF1186	0.85
PF01695	IstB_IS21	0.85
PF13508	Acetyltransf_7	0.85
PF13649	Methyltransf_25	0.85
PF07883	Cupin_2	0.85
PF12697	Abhydrolase_6	0.85
PF07690	MFS_1	0.85
PF13442	Cytochrome_CBB3	0.85
PF13437	HlyD_3	0.85
PF01545	Cation_efflux	0.85
PF05194	UreE_C	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	8.55
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	7.69
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.56
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	1.71
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.85
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.85
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.85
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.85
COG2371	Urease accessory protein UreE	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.85
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.85
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.48 %
Unclassified	root	N/A	30.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.93 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.40 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.27 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.71 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.98 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.42 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.56 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1.71 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.98 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	1.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1.71 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.98 %
Roseomonas pecuniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1.71 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1.71 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.98 %
Roseomonas pecuniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1.71 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.85 %
Bradyrhizobium sp. LTSP885	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	0.85 %
Bradyrhizobium sp. WD16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD16	0.85 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.98 %
Roseomonas pecuniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1.71 %
Streptomyces sp. LaPpAH-165	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. LaPpAH-165	0.85 %
Bradyrhizobium sp. LTSP885	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	0.85 %
Bradyrhizobium sp. WD16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD16	0.85 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10397037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	561	Open in IMG/M
3300002568\|C688J35102_118992230	Not Available	623	Open in IMG/M
3300004633\|Ga0066395_10717307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	595	Open in IMG/M
3300005174\|Ga0066680_10660355	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005184\|Ga0066671_10041156	All Organisms → cellular organisms → Bacteria → Proteobacteria	2263	Open in IMG/M
3300005434\|Ga0070709_10035307	All Organisms → cellular organisms → Bacteria	3038	Open in IMG/M
3300005435\|Ga0070714_101525503	Not Available	653	Open in IMG/M
3300005435\|Ga0070714_101653479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. LaPpAH-165	625	Open in IMG/M
3300005436\|Ga0070713_100126904	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300005445\|Ga0070708_101657916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	595	Open in IMG/M
3300005447\|Ga0066689_10532856	Not Available	742	Open in IMG/M
3300005467\|Ga0070706_101952861	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005471\|Ga0070698_101511260	Not Available	623	Open in IMG/M
3300005538\|Ga0070731_10632343	Not Available	712	Open in IMG/M
3300005764\|Ga0066903_102136140	Not Available	1079	Open in IMG/M
3300005764\|Ga0066903_105327976	Not Available	680	Open in IMG/M
3300006028\|Ga0070717_10179310	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300006175\|Ga0070712_100120583	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300006806\|Ga0079220_11948979	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300009143\|Ga0099792_10131571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1356	Open in IMG/M
3300009792\|Ga0126374_11729537	Not Available	521	Open in IMG/M
3300010046\|Ga0126384_11506867	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300010048\|Ga0126373_10160199	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300010048\|Ga0126373_10398976	Not Available	1399	Open in IMG/M
3300010159\|Ga0099796_10120407	Not Available	1008	Open in IMG/M
3300010358\|Ga0126370_10760724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	859	Open in IMG/M
3300010358\|Ga0126370_10782525	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300010358\|Ga0126370_11195714	Not Available	707	Open in IMG/M
3300010358\|Ga0126370_11329881	Not Available	675	Open in IMG/M
3300010358\|Ga0126370_12098361	Not Available	555	Open in IMG/M
3300010359\|Ga0126376_12145482	Not Available	603	Open in IMG/M
3300010361\|Ga0126378_11954606	Not Available	668	Open in IMG/M
3300010361\|Ga0126378_12090425	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300010366\|Ga0126379_11464246	Not Available	789	Open in IMG/M
3300010376\|Ga0126381_100037091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5879	Open in IMG/M
3300010376\|Ga0126381_100304425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2184	Open in IMG/M
3300010376\|Ga0126381_101378986	All Organisms → cellular organisms → Bacteria → Proteobacteria	1019	Open in IMG/M
3300010376\|Ga0126381_102171216	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300010376\|Ga0126381_102519962	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300012361\|Ga0137360_11357091	Not Available	613	Open in IMG/M
3300012685\|Ga0137397_11219253	Not Available	541	Open in IMG/M
3300012918\|Ga0137396_10300395	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300012923\|Ga0137359_10029194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4724	Open in IMG/M
3300012971\|Ga0126369_10437795	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300012971\|Ga0126369_11773192	Not Available	706	Open in IMG/M
3300016270\|Ga0182036_10055723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2507	Open in IMG/M
3300016270\|Ga0182036_10328856	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300016294\|Ga0182041_10633903	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300016294\|Ga0182041_11713533	Not Available	582	Open in IMG/M
3300016294\|Ga0182041_11952915	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300016341\|Ga0182035_10467361	All Organisms → cellular organisms → Bacteria → Proteobacteria	1072	Open in IMG/M
3300016341\|Ga0182035_10917036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	773	Open in IMG/M
3300016341\|Ga0182035_11697480	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300016387\|Ga0182040_10013251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4329	Open in IMG/M
3300016387\|Ga0182040_10759667	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300016445\|Ga0182038_10748677	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300020580\|Ga0210403_10271802	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300020581\|Ga0210399_10524708	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300020581\|Ga0210399_11499065	Not Available	523	Open in IMG/M
3300021170\|Ga0210400_11261088	Not Available	593	Open in IMG/M
3300021406\|Ga0210386_10485033	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300021476\|Ga0187846_10050131	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300021478\|Ga0210402_10982685	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300021560\|Ga0126371_10037629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4571	Open in IMG/M
3300025910\|Ga0207684_11298076	Not Available	599	Open in IMG/M
3300026312\|Ga0209153_1115801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1014	Open in IMG/M
3300028047\|Ga0209526_10390961	Not Available	925	Open in IMG/M
3300028536\|Ga0137415_11123953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	599	Open in IMG/M
3300031545\|Ga0318541_10393040	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300031561\|Ga0318528_10174884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1146	Open in IMG/M
3300031561\|Ga0318528_10667151	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300031573\|Ga0310915_10228919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1305	Open in IMG/M
3300031668\|Ga0318542_10031253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD16	2295	Open in IMG/M
3300031679\|Ga0318561_10133176	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300031713\|Ga0318496_10554491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	635	Open in IMG/M
3300031719\|Ga0306917_10445081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1015	Open in IMG/M
3300031736\|Ga0318501_10169820	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300031744\|Ga0306918_10572977	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300031747\|Ga0318502_10710298	Not Available	608	Open in IMG/M
3300031753\|Ga0307477_10423271	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300031763\|Ga0318537_10226167	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300031768\|Ga0318509_10691367	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300031771\|Ga0318546_10206349	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300031777\|Ga0318543_10189180	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300031777\|Ga0318543_10251709	Not Available	788	Open in IMG/M
3300031778\|Ga0318498_10429389	Not Available	586	Open in IMG/M
3300031780\|Ga0318508_1193181	Not Available	582	Open in IMG/M
3300031781\|Ga0318547_10033596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2661	Open in IMG/M
3300031792\|Ga0318529_10095988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1334	Open in IMG/M
3300031793\|Ga0318548_10003836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5259	Open in IMG/M
3300031793\|Ga0318548_10268261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	839	Open in IMG/M
3300031797\|Ga0318550_10040793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2047	Open in IMG/M
3300031797\|Ga0318550_10198992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	969	Open in IMG/M
3300031805\|Ga0318497_10237803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1009	Open in IMG/M
3300031819\|Ga0318568_10138453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1482	Open in IMG/M
3300031893\|Ga0318536_10484827	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300031912\|Ga0306921_10082842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3697	Open in IMG/M
3300031941\|Ga0310912_10766976	Not Available	746	Open in IMG/M
3300031941\|Ga0310912_10862852	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031945\|Ga0310913_10053770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2636	Open in IMG/M
3300031946\|Ga0310910_10988224	Not Available	658	Open in IMG/M
3300031959\|Ga0318530_10073751	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300032010\|Ga0318569_10135241	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300032039\|Ga0318559_10402444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	638	Open in IMG/M
3300032039\|Ga0318559_10491997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300032042\|Ga0318545_10025099	All Organisms → cellular organisms → Bacteria → Proteobacteria	1922	Open in IMG/M
3300032044\|Ga0318558_10375560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300032051\|Ga0318532_10243596	Not Available	638	Open in IMG/M
3300032059\|Ga0318533_11042371	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300032063\|Ga0318504_10534806	Not Available	562	Open in IMG/M
3300032076\|Ga0306924_12005733	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300032090\|Ga0318518_10317539	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300033289\|Ga0310914_11885730	Not Available	502	Open in IMG/M
3300033290\|Ga0318519_10498622	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.15%
Cave	Environmental → Terrestrial → Cave	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.62%
Loam	Environmental → Terrestrial → Soil → Loam	14.53%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_103970372	3300001867	Forest Soil	DLPSRRDIKAVFAAGGFAPVVHQVVTQVTAPNWPSFVEKSALRADSFLARLSDDDFQRGMVALRTHGDAINRDEAVTEEIDWFVFTRGR*
C688J35102_1189922301	3300002568	Soil	GGFTPVVQEKVRQVIAPNWSSLVEKSGLRADSFLARLADEDFEKGMAAFRSPGRSIDLDAPVTEEINWFVFTRNG*
Ga0066395_107173072	3300004633	Tropical Forest Soil	LPSRRDIEAVFAVSGFTPVAHQVVTQVTAANWPSFVEKSALRANSFLARLSDDDFQRGMAALRSAGSMINQNDAVTEDIDWFVFTQQG*
Ga0066680_106603551	3300005174	Soil	TQVTATDWPSFIEKSALSADSFLARLSDDDFHEGMAALRTPGDATNQDDAVTEEIDWFVFTQHG*
Ga0066671_100411565	3300005184	Soil	RRDIETVFAASGFIPAMHQVVTQVTAADWRSFIEKSAVRADSFLARLSDDDFQQGMAALRNPGGTINQDDAVTEEIDWFVFIRH*
Ga0070709_100353074	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGAPTSYSCRRDIESVFAAGGFTRVVHQVMTQVTAGEWPSFIEKSALRADSFLARLSDDDFQQGMAALRTPGDAINQNDDVTEEIDWFVFLRHG*
Ga0070714_1015255032	3300005435	Agricultural Soil	VTQVTAPNWPSVVKKSALRADSFLARLSDDEFQRGMAALRTRGDAINQDDAVTEEIDWCVFTQHG*
Ga0070714_1016534791	3300005435	Agricultural Soil	TWTTGKGPQRRFRSRMGAPTSYSCRRDIESVFAAGGFTRVVHQVVTQVTAREWPSFIEKSALRADSFLARLSDDDFQQGMAALRTPGDAINQNDAVTEEIDWFVFLRHG*
Ga0070713_1001269044	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VHQVMTQVTAGEWPSFIEKSALRADSFLARLSDDDFQQGMAALRTPGDAINQNDAVTEEIDWFVFLRHG*
Ga0070708_1016579161	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VHQVVTQVTAIDWPSFIEKSALRADSFLARLSDDDFQQGIAALRTPGDAINQNDAVTEEIDWFVFTRRG*
Ga0066689_105328561	3300005447	Soil	SFIAAGFTPVVHQVVTQVTARDWPSFIHKSSLRRDSFLARLSQEDFDTGTTELRARGGETNPDFPVTEEIGWFVFKKQA*
Ga0070706_1019528612	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ESVFAAGGFAAVVHRVVTQVTAADWPSFIEKSALRADSFLARLPDADFQQGMAALRAPGDAIDQNAAVTEEIDWFVFTRRGGRFPARRGAGGTS*
Ga0070698_1015112601	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	QVVTQVTAPDWRSFIEKSALRADSFLARLSDAEFQQGIAALRTPGDAINQDDAVTEEIDWFVFTRYG*
Ga0070731_106323431	3300005538	Surface Soil	DWPSFVGKSALRADSFLARLSDDDFQRGMARLRSPDAQIDPNAAVTEEIDWFVFARER*
Ga0066903_1021361404	3300005764	Tropical Forest Soil	PSFVEKSALRADSFLARLSDDDFQRGMAALRTRGDAINQYDAVTEEIDWFVFTRQYG*
Ga0066903_1053279762	3300005764	Tropical Forest Soil	IEAVFAAGGFAPVVHQVVTQVTAADWPSFIEKSALRADSFLARLSDDDFQRGLAALRNPGDAINRDDAVTEEIDWYVFTRDG*
Ga0070717_101793104	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGAPTSYSCRRDIESVFAAGGFTRVVHQVMTQVTAGEWPSFIEKSALRADSFLARLSDDDFQQGMAALRTPGDAINQNDAVTEEIDWFVFLRHG*
Ga0070712_1001205835	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTQVTAGEWPSFIEKSALRADSFLARLSDDDFQQGMAALRTPGDAINQNDAVTEEIDWFVFLRHG*
Ga0079220_119489792	3300006806	Agricultural Soil	PVANQVVTQITAPDWQSFVEKSALRADSFLARLSNDEFERGMAALRAHGEAIDQKAAVTEEVGWFVLKA*
Ga0099792_101315712	3300009143	Vadose Zone Soil	VHQVVTQVTAANWTRFVEKSALRADSFLARLSDDDFQQGMTALRTPGDAINQDDAVTEEIDWFVFTRRG*
Ga0126374_117295371	3300009792	Tropical Forest Soil	QIVTQTIATNRSSFVEKSALRADSFLARLSDEDFQHGMAALRSHGQKIDPNMPVSEEIGWFLFRTGC*
Ga0126384_115068671	3300010046	Tropical Forest Soil	QVTAPNWPSFVEKSALRADSFLARLSNDDFQRGMAALRTHGDAINQNVAVTEEIDWFVFTRHG*
Ga0126373_101601992	3300010048	Tropical Forest Soil	VHQVVTQVTAPDWPSFIDKSALRADSFLARLSDDGFQQGMAALRTRGDMINQNDAVTEEIDWFVFLRHG*
Ga0126373_103989761	3300010048	Tropical Forest Soil	VSGFTPVVHQVVTQVTAPNWPSIVEKSALRPNSFLARLSDDEFQQGLATLRNPGNAIKRDDAVTEEIYWFVFTRDG*
Ga0099796_101204072	3300010159	Vadose Zone Soil	VHQVVTQVTAANWTRFVEKSALRADSFLARLSDDDFQQGMTALRTPGDAINQDDAVTEEIDWVVFTRRG*
Ga0126370_107607242	3300010358	Tropical Forest Soil	VHQAVTQVTAPDWPSFIEKSAPRADSFLARMSNDDFRRGMVALRNPGDAINQKDAVTEEIDWFVFTQQG*
Ga0126370_107825251	3300010358	Tropical Forest Soil	PNWPSFVEKSALRADSFLARLSNDDFQRGMAALRTHGDAINQNVAVTEEIDWFVFTRHG*
Ga0126370_111957142	3300010358	Tropical Forest Soil	HQVVKVAAPNWPRFVEQSALRADSFSTRLSDDDFQRGLAALRTHGDAIDQNDTVTEEIDWFVFTRRHG*
Ga0126370_113298811	3300010358	Tropical Forest Soil	VSGFTPVVHQVVTQVTAPNWPSIVEKSALRPNSFLARLSDDEFQQGLATLRNPGNAIKRDDAVTEEIYWFVFTRDE*
Ga0126370_120983612	3300010358	Tropical Forest Soil	PVVHQVVTQVTAPNWPSFVEKSALRGDSFLARLSDDEFQRGLAALRTHGDSIDQDDAVTEEIDWFVFTRGE*
Ga0126376_121454822	3300010359	Tropical Forest Soil	IRQVVTQVTAANWLSFVEKSALRADSFLARLPDKDFQEGMAALRNPGDAINQNEAVTEG*
Ga0126378_119546061	3300010361	Tropical Forest Soil	WLSFVEKSALRADSFLARLSDDDFQRGMAALRTRGDAINQYDAVTEEIDWFVFTRRHG*
Ga0126378_120904251	3300010361	Tropical Forest Soil	VVTQVTAPNWPSFVEKSALRADSFLARLSNDDFQRGMAALRTHGDAINQNVAVTEEIDWFVFTRHG*
Ga0126379_114642463	3300010366	Tropical Forest Soil	RDIEVVFAAVGFTPVVHKVVTQVTAPNWPSFVEKSALRADSFLARLSDDEFQRGLATLRTHGNAIDQNDAVTEEIDWFVFTRQYG*
Ga0126381_1000370911	3300010376	Tropical Forest Soil	TQVTAPNWPSFVEKSALRADSFLARLSDHDFQRGMAALRDHCDAIYQNGAVTEEIDWFVFTRAA*
Ga0126381_1003044254	3300010376	Tropical Forest Soil	TPVVHQVVTQVTAPDWPSFVEKSVLRADSFLARLSDDEFQRGMAALRTHGDAINQDDAVTEEIDWFVFTRDE*
Ga0126381_1013789863	3300010376	Tropical Forest Soil	WQSFVAKSELRADSFLARLSDEDFREGIAALRTPGDTIDPNAPVTEEIDWFVFLRQG*
Ga0126381_1021712161	3300010376	Tropical Forest Soil	VHQVVTQVTAPDWPSFIDKSALRADSFLARLSDDGFQQGMAALRTRGDMINQNDAVTEEIDWF
Ga0126381_1025199622	3300010376	Tropical Forest Soil	PNWPSFVEKSALRADSFLARLSDDEFQRGLAALRTHGDAIDKNDAVTEEIDWFVFTRRG*
Ga0137360_113570911	3300012361	Vadose Zone Soil	TAADWPSFIEKSVLRADSFLARLSDDDFKQGMAALRIPGDAINQNAAVTEEIDWFVFHRHG*
Ga0137361_108338801	3300012362	Vadose Zone Soil	VASEIPSRRDVESAFATRGFIRTIHQVVTEVTSPDWETFVEKSALRADSFLARLSDEEFQQGMAAMRSAGNRIDQNEPVAEEIDWFVFRRQ*
Ga0137397_112192531	3300012685	Vadose Zone Soil	ESVFAAGGFTRVVHQVVTQVTAIDWPSFIEKSALRADSLLARLSDDDFQQGMTALRTPGDAINQDDAVTEEIDWVVFTRRG*
Ga0137396_103003951	3300012918	Vadose Zone Soil	KFSEPQVIAPDWPSFIEKSALCADSFLARLSDDDFQQGMAALRSPGDAINQNDAVTEEIDWFVFTRRG*
Ga0137359_100291942	3300012923	Vadose Zone Soil	VHQVVTQVTAADWPSFIEKSVLRADSFLARLSDDDFQQGMAALRTPGDGTNQNAAITEEIDWFVLQRHG*
Ga0126369_104377952	3300012971	Tropical Forest Soil	VSGFTPVVHQVVTQVTAPNWPSIVEKSALRPNSFLARLSDDEFQRGMAALRTHDDAINQDDAVTEEIDWFVFTRDE*
Ga0126369_117731921	3300012971	Tropical Forest Soil	GFTPVVHQVVTQVTAPNWPSFVEKSALRGDSFLARLSDDEFQRGLAALRTHGDAIDKNDPVTEEIDWFVFTRRG*
Ga0182036_100557231	3300016270	Soil	GFSPIVHRVVTQVTAADWPSFIEKSALRADSFLARLSDEDFLHGMAALRTPGDAINQNDAVTEELDWFVFLRQG
Ga0182036_103288562	3300016270	Soil	APDWPSFIAKSALRADSFLARLSDDDFRQGMAALRNRGDSTDQNAAVTEEIDWFVFRRQG
Ga0182041_106339031	3300016294	Soil	VTQVTAPDWPSFVEKSALRADSFLARLSDGEFQRGMAALRTHGGAINQNDAVTEEIDWFVFTRHG
Ga0182041_117135332	3300016294	Soil	SVFTTDGFALLVHQVVTQVTAPDWPTFIEKSALRADSFLARLNDDDFQQGMAALRTHGDEINQNAAVTEEIDWFVFSRHG
Ga0182041_119529151	3300016294	Soil	FGILSHSVLTQVVAPDWGTFVEKSALRADSFLARLSDRDFEQGMAALRSPSAAINQNDPVTEEIGWFVFARNG
Ga0182035_104673613	3300016341	Soil	VHRVVTQVTAADWPSFIEKSALRADSFLARLSDEDFLHGMAALRTPGDAINQNDAVTEELDWFVFLRQG
Ga0182035_109170362	3300016341	Soil	DWPTFIEKSALRADSFLARLSDDNFQQGMAALRTHGRAANQNAAVTEEIDWFVFSRHG
Ga0182035_116974802	3300016341	Soil	QSVFGVSGFTPVVHRVVTQVTAPNWPSFIEKSALRADSFLARLSNDDFLQGMAVLRNPGDAINQNDAVTEEIDWFVFLRHG
Ga0182040_100132517	3300016387	Soil	SRRDIEADFGASGFTPVVHEGVTQVTAPNWPTFVQESALRADSFLARLSNDDFHRGMAALRDPGDAIDQNDAVTEEIDWFVFTRHG
Ga0182040_107596672	3300016387	Soil	TQVTAPDWPSFVEKSALRADSFLARLSDGEFQRGMTALRIHGDAIDQNDAVTEEIDWFVFTRHG
Ga0182038_107486772	3300016445	Soil	VSGFTPVVHQVVTQVTAPNWQSFVEKSALRADSFLARLSNEDFQRGMAAFRTHGDAIDQNDAVTEEIDWFVFTRRG
Ga0210403_102718022	3300020580	Soil	VDQVVTQVTAPNWPSFLEKSALLADSFLARLSDDDFRRGMAALRTHGDAIDHDDAVTEEIDWFVFTRHG
Ga0210399_105247082	3300020581	Soil	AGFKPSVSQIVTQKIASDWQSFVEKSALRADSFLARLSSDDFDQGMAALRAHSEGIDKKAAVTEEIAWFVFRA
Ga0210399_114990651	3300020581	Soil	VDQVVTQVTAPNWPSFLEKSALLADSFLARLSDDDFRRGMAALRTHGDAIDHDDAVTEEIDWFVFTRPDEK
Ga0210400_112610881	3300021170	Soil	PSFVKKSALRADSFLARLSDDEFQRGMAALRTRGDAINQDDAVTEEIDWFVFTQHG
Ga0210386_104850331	3300021406	Soil	GFAPVVDQVVTQVTAPNWPSFLEKSALLADSFLARLSDDDFRRGMAALRTHGDAIDHDDAVTEEIDWFVFTRHG
Ga0187846_100501312	3300021476	Biofilm	VGGFTPIVHRVVTQVTAPDWPSFIEKSTLRADSFLARLSDDDFQRGMAALRTPGNAINQNDAVTEEIDWFVFLRHG
Ga0210402_109826851	3300021478	Soil	APNWPSFVKKSALRADSFLARLSDDEFQRGMAALPTRGAAINQDDAVTEEIEWFVFTQHG
Ga0126371_100376298	3300021560	Tropical Forest Soil	WPSFVEKSALRADSFLARLSDHDFQRGMAALRDHCDAIYQNGAVTEEIDWFVFTRAA
Ga0207684_112980761	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ESVFAAGGFAAVVHRVVTQVTAADWPSFIEKSALRADSFLARLPDADFQQGMAALRAPGDAIDQNAAVTEEIDWFVFTRRGGRFPARRGAGGTS
Ga0207646_115696752	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FAAAGFARTVHQTVTEVTASDWPTFVEKSALRADSFLARLSDEDFQHGMAAMRRAGAVVDQDNPVSEEIDWFVFRRR
Ga0209153_11158011	3300026312	Soil	AASGFIPAMHQVVTQVTAADWRSFIEKSAVRADSFLARLSDDDFQQGMAALRNPGGTINQDDAVTEEIDWFVFIRH
Ga0209526_103909613	3300028047	Forest Soil	RREIESVFAAGGFRPVVHQVVTQVTAPDWSSFIEKSALRADSFLARLSDDDFQQGMTALRTPGDAINQDDAVTEEIDWFVFTRHG
Ga0137415_111239531	3300028536	Vadose Zone Soil	VHQVVTQVTAIDWPSFIEKSALRADSFLARLSDDDFQQGMTALRTPGDAINQDDAVTEEIDWFVFTRRG
Ga0318541_103930401	3300031545	Soil	VHQVVTQVTAPDWPSFIDKSALRADSFLARLSDDGFQQGMAALRTRGDMINQNDAVTEEIDWFVFLRHG
Ga0318528_101748844	3300031561	Soil	FIEKSALRADSFLARLSDEDFLHGMAALRTPGDAINQNDAVTEELDWFVFLRQG
Ga0318528_106671511	3300031561	Soil	VHRVVTQVTAADWPSVTEKSALRADSFLARLSDEDFLHGMAALRTPGDAINQNDAVTE
Ga0310915_102289192	3300031573	Soil	VHRVVTQVTAADWPSVTEKSALRADSFLARLSDEDFQQGMAALRTPGEAINQSDAVTEQIDWFVFLRQG
Ga0318542_100312532	3300031668	Soil	VFGAGGFTTVVHQVVTQVTAPDWPSFIDKSALRADSFLARLSDDGFQQGMAALRTRGDMINQNDAVTEEIDWFVFLRHG
Ga0318561_101331762	3300031679	Soil	FTTVVHQVVTQVTAPDWPSFIAKSALRADSFLARLSDDDFRQGMAALRNPGDSTDQNAAASEEIDWFVFRRQG
Ga0318496_105544911	3300031713	Soil	AFVLSGFSPIVHRVVTQVTAADWPSFIEKSALRADSFLARLSDEDFLHGMAALRTPGDAINQNDAVTEELDWFVFLRQG
Ga0306917_104450811	3300031719	Soil	GGFSPIVHRVVTQVTAADWPSVTEKSALRADSFLARLSDEDFQQGMAALRTPGEAINQSDAVTEQIDWFVFLRQG
Ga0318501_101698201	3300031736	Soil	VVTQVTAADWPSFIEKSALRADSFLARLSDEDFLHGMAALRTPGDAINQNDAVTEELDWFVFLRQG
Ga0306918_105729772	3300031744	Soil	VTQVTAADWPSVTEKSALRADSFLARLSDEDFQQGMAALRTPGEAINQSDAVTEQIDWFVFLRQG
Ga0318502_107102981	3300031747	Soil	FTAGGFRPVVHQVVTQVTAPDWPSFIDKSALRADSFLARLSDDGFQQGMAALRIRGDMINQNDAVTEEIDWFVFLRHG
Ga0307477_104232712	3300031753	Hardwood Forest Soil	VVHQVVTQVTAPNWPSFVKKSALRADSFLARLSDDEFQRGMAALRTRGDAINQDDVVTEEIDWFVFTQQG
Ga0318537_102261673	3300031763	Soil	AADWPSFIEKSALRADSFLARLSDEDFLHGMAALRTPGDAINQNDAVTEELDWFVFLRQG
Ga0318509_106913672	3300031768	Soil	VHRVVTQVTAADWPSVTEKSALRADSFLARLSDEDFQQGMAALRTPGEAINQSDAVTEQIDWFV
Ga0318546_102063491	3300031771	Soil	EIENVFGAGGFTTVVHQVVTQVTAPDWPSFIAKSALRADSFLARLSDDDFRQGMAALRNRGDSTDQNAAVTEEIDWFVFRRQG
Ga0318543_101891802	3300031777	Soil	VVTQVTAPDWPSFIAKSALRADSFLARLSDDDFRQGMAALRNRGDSTDQNAAVTEEIDWFVFRRQG
Ga0318543_102517092	3300031777	Soil	VHQVVTQVTAPDWPSFIDKSALRADSFLARLSDDGFQQGMAALRIRGDMINQNDAVTEEIDWFVFLRHG
Ga0318498_104293892	3300031778	Soil	HQVVTQVTAPDWPSFIAKSALRADSFLARLSDDDFRQGMAALRNRGDSTDQNAAVTEEIDWFVFRRQG
Ga0318508_11931811	3300031780	Soil	VTQVTAPDWPSFIAKSALRADSFLARLSDDDFRQGMAALRNRGDSTDQNAAVTEEIDWFVFRRQG
Ga0318547_100335961	3300031781	Soil	FRPVVHQVVTQVTAPDWPSFIDKSALRADSFLARLSDDGFQQGMAALRTRGDMINQNDAVTEEIDWFVFLRHG
Ga0318529_100959884	3300031792	Soil	RVVTQVTAADWPSFIEKSALRADSFLARLSDEDFLHGMAALRTPGDAINQNDAVTEELDWFVFLRQG
Ga0318548_100038365	3300031793	Soil	VFGAGGFTTVVHQVVTQVTAPDWPSFIAKSALRADSFLARLSDDDFRQGMAALRNRGDSTDQNAAVTEEIDWFVFRRQG
Ga0318548_102682613	3300031793	Soil	QVVAPDWGTFVEKSALRADSFLARLSDRDFEQGMAALRSPSAAINQNDPVTEEIGWFVFARNG
Ga0318550_100407934	3300031797	Soil	VTQVTAADWPSVTEKSALRADSFLARLSDEDFLHGMAALRTPGDAINQNDAVTEELDWFVFLRQG
Ga0318550_101989922	3300031797	Soil	IQSVFAVGGFTPIVHRVVTQVTAPDWPSFIKKSALRADSFLARLSDDDFQQGMAALRTPGDAINQNDAVTEEIDWFVFLRHG
Ga0318497_102378032	3300031805	Soil	PSVIEKSTLRADSFLARLSDDDFQRGMAALRTPGNAINQNDAVTEEIDWFVFLRHG
Ga0318568_101384533	3300031819	Soil	VHRVVTQVTAPDWPSFIEKSTLRADSFLARLSDDDFQRGMAALRTPGNAINQNDAVTEEIDWFVFLRHG
Ga0318536_104848272	3300031893	Soil	HEVVTQVTAPNWPTFVQKSALRADSFLARLSNDDFHRGMAALRDPGDAIDQNDAVTEEIDWFVFTRHG
Ga0306921_100828428	3300031912	Soil	ILSHSVLTQVVAPDWGTFVEKSALRADSFLARLSDRDFEQGMAALRSPSAAINQNDPVTEEIGWFVFARNG
Ga0310912_107669762	3300031941	Soil	PDWPTFIEKSALRADSFLARLNDDDFQQGMAALRTHGDEINQNAAVTEEIDWFVFSRHG
Ga0310912_108628522	3300031941	Soil	PVVHQVATQVTAPDWPSFVEKSALRADSFLARLSDGEFQRGMAALRTHGDVIDQNDAVTEGIDWFVFTRQG
Ga0310913_100537704	3300031945	Soil	RVVTQVTAPDWPSFIEKSTLRADSFLARLSDDDFQRGMAALRTPGNAINQNDAVTEEIDWFVFLRHG
Ga0310910_109882242	3300031946	Soil	WPTFVEKSALRADSFLARLSDGEFQRGMAALRTHGDVIDQNDAVTEGIDWFVFTRQG
Ga0318530_100737511	3300031959	Soil	SDLPSRPEIENVFGAGGFTTVVHQVVTQVTAPDWPSFIAKSALRADSFLARLSDDDFRQGMAALRNRGDSTDQNAAVTEEIDWFVFRRQG
Ga0318569_101352411	3300032010	Soil	APDWPSFIAKSALRADFFLARLSDDDFRQGMAALRNPGDSTDQNAAASEEIDWFVFRRQG
Ga0318559_104024442	3300032039	Soil	IRSAFVLSGFSPIVHRVVTQVTAADWPSFIEKSALRADSFLARLSDEDFLHGMAALRTPGDAINQNDAVTEELDWFVFLRQG
Ga0318559_104919971	3300032039	Soil	MHDRRKAAHDWPSVIEKSTLRADSFLARLSDDDFQRGMAALRTPGNAINQNDAVTEEIDWFVFLRHG
Ga0318545_100250993	3300032042	Soil	FGAGGFTTVVHQVVTQVTAPDWPSFIAKSALRADSFLARLSDDDFRQGMAALRNRGDSTDQNAAVTEEIDWFVFRRQG
Ga0318558_103755602	3300032044	Soil	APGWPSFIEKSTLRADSFLARLSDDDFQRRMAALRTPGNAINQNDAVTEEIDWFVFLRHG
Ga0318532_102435962	3300032051	Soil	GRFRPPSRRDIEAVFTAGGFRPVVHQVVTQVTAPDWPSFIDKSALRADSFLARLSDDGFQQGMAALRTRGDMINQNDAVTEEIDWFVFLRHG
Ga0318533_110423712	3300032059	Soil	VTQVVAPDWDHFVEKSALRADSFLARLSDREFEEGMAALRCPGAAIEQNDPVTEEIGWFVFARSG
Ga0318504_105348061	3300032063	Soil	VVTQVTAPDWPSFIDKSALRADSFLARLSDDGFQQGMAALRIRGDMINQNDAVTEEIDWFVFLRHG
Ga0306924_120057332	3300032076	Soil	WDHFVEKSALRADSFLARLSDREFEEGMAALRCPGAAIEQNDPVTEEIGWFVFARSG
Ga0318518_103175392	3300032090	Soil	LPSRPEIENVFGAGGFTTVVHQVVTQVTAPDWPSFIAKSALRADSFLARLSDDDFRQGMAALRNRGDSTDQNAAVTEEIDWFVFRRQG
Ga0310914_112318922	3300033289	Soil	TEKSALRADSFLARLSDEDFQQGMAALRTPGEAINQSDAVTEQIDWFVFLRQG
Ga0310914_118857302	3300033289	Soil	TAPDWPSFVEKSALRADSFLARLSDGEFQRGMTALRIHGDAIDQNDAVTEEIDWFVFTRH
Ga0318519_104986222	3300033290	Soil	VHQVVTQVTAPDWPSFIDKSALRADSFLARLSDDGFQQGMAALRTRGDMINQNDAVTEEIDWFV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077605

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences