Metagenome / Metatranscriptome Family F077659

Basic Information
Family ID	F077659
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	57 residues
Representative Sequence	PEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGMLPKQKRAKR
Number of Associated Samples	94
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.71 %
% of genes near scaffold ends (potentially truncated)	96.58 %
% of genes from short scaffolds (< 2000 bps)	90.60 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Most Common Taxonomy
Group	Unclassified (70.085 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.675 % of family members)
Environment Ontology (ENVO)	Unclassified (48.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (72.650 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.04% β-sheet: 0.00% Coil/Unstructured: 56.96%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00437	T2SSE	39.32
PF12244	DUF3606	12.82
PF05157	T2SSE_N	5.98
PF01661	Macro	2.56
PF00072	Response_reg	1.71
PF01544	CorA	0.85
PF01261	AP_endonuc_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	2.56
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
All Organisms	root	All Organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
cellular organisms	root	All Organisms → cellular organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.66 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	10.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.53 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	5.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	5.13 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.13 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.27 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	5.13 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	4.27 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.85 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.85 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	5.13 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	4.27 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	5.13 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	4.27 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.85 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.85 %
Chitinimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	5.13 %
Stenotrophomonas maltophilia group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group	4.27 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
campanulids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Asterales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Asteraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Asteroideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Anthemideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Anthemidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Tanacetum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Tanacetum cinerariifolium	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	5.13 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	4.27 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	0.85 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.85 %
Chitinimonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_14395245	Not Available	1638	Open in IMG/M
3300001976\|JGI24752J21851_1022731	Not Available	820	Open in IMG/M
3300002128\|JGI24036J26619_10107969	Not Available	571	Open in IMG/M
3300002244\|JGI24742J22300_10115698	Not Available	527	Open in IMG/M
3300003321\|soilH1_10024849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1240	Open in IMG/M
3300004463\|Ga0063356_106245196	Not Available	511	Open in IMG/M
3300005329\|Ga0070683_100970327	Not Available	816	Open in IMG/M
3300005336\|Ga0070680_101385311	Not Available	609	Open in IMG/M
3300005339\|Ga0070660_100922473	Not Available	737	Open in IMG/M
3300005341\|Ga0070691_10837972	Not Available	563	Open in IMG/M
3300005353\|Ga0070669_100446361	All Organisms → cellular organisms → Eukaryota	1065	Open in IMG/M
3300005353\|Ga0070669_100749074	Not Available	828	Open in IMG/M
3300005355\|Ga0070671_100067255	All Organisms → cellular organisms → Bacteria → Proteobacteria	2987	Open in IMG/M
3300005355\|Ga0070671_101318060	Not Available	637	Open in IMG/M
3300005355\|Ga0070671_101928244	Not Available	525	Open in IMG/M
3300005366\|Ga0070659_100091975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2432	Open in IMG/M
3300005366\|Ga0070659_100686276	Not Available	885	Open in IMG/M
3300005438\|Ga0070701_10806664	Not Available	641	Open in IMG/M
3300005439\|Ga0070711_100409112	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300005455\|Ga0070663_101184035	Not Available	671	Open in IMG/M
3300005459\|Ga0068867_100249629	All Organisms → cellular organisms → Eukaryota	1442	Open in IMG/M
3300005467\|Ga0070706_101785596	Not Available	559	Open in IMG/M
3300005530\|Ga0070679_100011957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas koreensis	8287	Open in IMG/M
3300005530\|Ga0070679_100127971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2521	Open in IMG/M
3300005563\|Ga0068855_101536225	Not Available	683	Open in IMG/M
3300005563\|Ga0068855_101676152	Not Available	649	Open in IMG/M
3300005563\|Ga0068855_102259457	Not Available	545	Open in IMG/M
3300005577\|Ga0068857_101997478	Not Available	569	Open in IMG/M
3300005577\|Ga0068857_102382134	Not Available	520	Open in IMG/M
3300005614\|Ga0068856_101225229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	767	Open in IMG/M
3300005842\|Ga0068858_100774206	Not Available	936	Open in IMG/M
3300005843\|Ga0068860_101087908	Not Available	819	Open in IMG/M
3300006173\|Ga0070716_100961419	Not Available	673	Open in IMG/M
3300006175\|Ga0070712_100204358	Not Available	1554	Open in IMG/M
3300006175\|Ga0070712_101910085	Not Available	520	Open in IMG/M
3300006196\|Ga0075422_10621641	Not Available	502	Open in IMG/M
3300006854\|Ga0075425_100376046	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300006954\|Ga0079219_10404250	Not Available	907	Open in IMG/M
3300007076\|Ga0075435_100446759	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300009011\|Ga0105251_10263637	Not Available	778	Open in IMG/M
3300009093\|Ga0105240_12204854	Not Available	571	Open in IMG/M
3300009100\|Ga0075418_13038768	Not Available	511	Open in IMG/M
3300010371\|Ga0134125_12150182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	607	Open in IMG/M
3300010373\|Ga0134128_11441372	Not Available	758	Open in IMG/M
3300010375\|Ga0105239_11575575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	759	Open in IMG/M
3300010397\|Ga0134124_11215896	Not Available	774	Open in IMG/M
3300010401\|Ga0134121_11590346	Not Available	673	Open in IMG/M
3300012212\|Ga0150985_109078945	Not Available	675	Open in IMG/M
3300012469\|Ga0150984_117699335	Not Available	680	Open in IMG/M
3300012485\|Ga0157325_1007174	Not Available	741	Open in IMG/M
3300012489\|Ga0157349_1040788	Not Available	521	Open in IMG/M
3300012885\|Ga0157287_1064413	Not Available	609	Open in IMG/M
3300012951\|Ga0164300_10266554	Not Available	878	Open in IMG/M
3300012955\|Ga0164298_11327244	Not Available	552	Open in IMG/M
3300012958\|Ga0164299_10302970	All Organisms → cellular organisms → Eukaryota	983	Open in IMG/M
3300012958\|Ga0164299_10375240	Not Available	904	Open in IMG/M
3300012960\|Ga0164301_10626974	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300012961\|Ga0164302_11279424	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012984\|Ga0164309_10508675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	923	Open in IMG/M
3300012984\|Ga0164309_11693036	Not Available	542	Open in IMG/M
3300012985\|Ga0164308_10161902	All Organisms → cellular organisms → Eukaryota	1666	Open in IMG/M
3300012988\|Ga0164306_10623818	Not Available	847	Open in IMG/M
3300012989\|Ga0164305_10824589	Not Available	772	Open in IMG/M
3300012989\|Ga0164305_11949065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	535	Open in IMG/M
3300013105\|Ga0157369_12517840	Not Available	521	Open in IMG/M
3300013306\|Ga0163162_12538691	Not Available	589	Open in IMG/M
3300013307\|Ga0157372_10032757	All Organisms → cellular organisms → Bacteria → Proteobacteria	5702	Open in IMG/M
3300013307\|Ga0157372_12683219	Not Available	572	Open in IMG/M
3300013307\|Ga0157372_12781325	Not Available	561	Open in IMG/M
3300013307\|Ga0157372_13089873	Not Available	532	Open in IMG/M
3300013308\|Ga0157375_11187079	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	895	Open in IMG/M
3300014326\|Ga0157380_13170094	Not Available	525	Open in IMG/M
3300018476\|Ga0190274_12057257	Not Available	667	Open in IMG/M
3300019356\|Ga0173481_10855768	Not Available	508	Open in IMG/M
3300020070\|Ga0206356_10923201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	795	Open in IMG/M
3300020081\|Ga0206354_10901119	Not Available	565	Open in IMG/M
3300025271\|Ga0207666_1006300	Not Available	1535	Open in IMG/M
3300025321\|Ga0207656_10119250	Not Available	1227	Open in IMG/M
3300025901\|Ga0207688_10111690	Not Available	1587	Open in IMG/M
3300025903\|Ga0207680_10054461	Not Available	2407	Open in IMG/M
3300025917\|Ga0207660_10691333	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	832	Open in IMG/M
3300025917\|Ga0207660_11559587	Not Available	533	Open in IMG/M
3300025919\|Ga0207657_10556845	Not Available	896	Open in IMG/M
3300025920\|Ga0207649_10718880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	775	Open in IMG/M
3300025922\|Ga0207646_10892782	Not Available	789	Open in IMG/M
3300025928\|Ga0207700_11514955	Not Available	595	Open in IMG/M
3300025930\|Ga0207701_10704202	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	855	Open in IMG/M
3300025931\|Ga0207644_10112737	Not Available	2058	Open in IMG/M
3300025931\|Ga0207644_10924909	Not Available	731	Open in IMG/M
3300025933\|Ga0207706_10665142	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300025933\|Ga0207706_11145861	Not Available	648	Open in IMG/M
3300025940\|Ga0207691_10026755	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5413	Open in IMG/M
3300025941\|Ga0207711_11114844	Not Available	730	Open in IMG/M
3300025981\|Ga0207640_10238843	Not Available	1403	Open in IMG/M
3300026035\|Ga0207703_10123437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2226	Open in IMG/M
3300026041\|Ga0207639_10476429	Not Available	1137	Open in IMG/M
3300026041\|Ga0207639_10616011	Not Available	1002	Open in IMG/M
3300026067\|Ga0207678_11197175	Not Available	673	Open in IMG/M
3300026075\|Ga0207708_11637838	Not Available	565	Open in IMG/M
3300026078\|Ga0207702_10166287	Not Available	2018	Open in IMG/M
3300026078\|Ga0207702_11162334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	766	Open in IMG/M
3300026078\|Ga0207702_11431539	Not Available	685	Open in IMG/M
3300026116\|Ga0207674_10680028	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300026116\|Ga0207674_11640466	Not Available	611	Open in IMG/M
3300027614\|Ga0209970_1019214	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	1150	Open in IMG/M
3300027787\|Ga0209074_10315966	Not Available	630	Open in IMG/M
3300028381\|Ga0268264_10157049	All Organisms → cellular organisms → Eukaryota	2045	Open in IMG/M
3300031226\|Ga0307497_10163796	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	935	Open in IMG/M
3300031548\|Ga0307408_101955045	Not Available	563	Open in IMG/M
3300031562\|Ga0310886_10468450	Not Available	755	Open in IMG/M
3300031908\|Ga0310900_10565839	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	893	Open in IMG/M
3300031943\|Ga0310885_10143080	All Organisms → cellular organisms → Eukaryota	1136	Open in IMG/M
3300031944\|Ga0310884_10072579	Not Available	1614	Open in IMG/M
3300032013\|Ga0310906_10497055	Not Available	825	Open in IMG/M
3300032013\|Ga0310906_11088719	Not Available	578	Open in IMG/M
3300032074\|Ga0308173_12285713	Not Available	510	Open in IMG/M
3300033486\|Ga0316624_10654807	Not Available	919	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.85%
Environmental	Environmental	46.15%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.85%
Terrestrial	Environmental → Terrestrial	46.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	23.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.24%
Loam	Environmental → Terrestrial → Soil → Loam	13.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	23.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	12.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012485	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610	Host-Associated	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077659

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_143952451	3300000363	Soil	RKQLGLPLDSRLSLKDALAFRAFEDTDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVSQS*
JGI24752J21851_10227312	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	QLGLPLSSRLSPKEALAFRAFEDTDIKLKKSFPTMSDTQRRSMAREVLRDKGVIAKRKKSVPQS*
JGI24036J26619_101079691	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	RRIRKQLGLPLNSRLSPQEALAFRAFEDTDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVPQS*
JGI24742J22300_101156982	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	LGLPVDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKH*
soilH1_100248492	3300003321	Sugarcane Root And Bulk Soil	LVGNAKRREIRKKLGLPERSRLTPEQQAAFMAFENTDMKLKKSFPTMTDTQRQAMARDVLRDRGMLPKKSKAR*
Ga0063356_1062451961	3300004463	Arabidopsis Thaliana Rhizosphere	LARMVGNSKRREIRKKLGLPESSRLTPEQAAAFQAFENTDMKLKKSFPDISDTQRQAMAREVLRDKGMLPKKKKTSAS*
Ga0070683_1009703271	3300005329	Corn Rhizosphere	KEALAFRAFEDTDIKLKKSFPTMSDTQRRSMAREVLRDKGVIAKRKKSVPQS*
Ga0070680_1013853112	3300005336	Corn Rhizosphere	FENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR*
Ga0070660_1009224731	3300005339	Corn Rhizosphere	FQAFENTDMKLKKSFPDISDTQRQAMAREVLRDKGMLPKKKKTSAS*
Ga0070691_108379721	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	AFQAFENTDMKLKKSFPTLSDTQRQAMARDVLRDKGMLPKRKKSS*
Ga0070669_1004463612	3300005353	Switchgrass Rhizosphere	DSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR*
Ga0070669_1007490741	3300005353	Switchgrass Rhizosphere	FENTDMKLKKSFPTMSDTQREAMAREVLRDKGVLPKKKKRSA*
Ga0070671_1000672554	3300005355	Switchgrass Rhizosphere	MAFRAFEDTDVKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKAVSQS*
Ga0070671_1013180601	3300005355	Switchgrass Rhizosphere	TDMKLKKSFPTMSDTQRQSMAREVLRDKGVLPKQKRAKK*
Ga0070671_1019282441	3300005355	Switchgrass Rhizosphere	LGLPVDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR*
Ga0070659_1000919751	3300005366	Corn Rhizosphere	NTDMKLKKSFPTMSDTQRQAMAREVLRDNGVLPKKKKTSA*
Ga0070659_1006862762	3300005366	Corn Rhizosphere	NTDMKLKKSFPTMTDTQRQSMARDVLRDRGMLPKKSKAR*
Ga0070701_108066641	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	RRRIRKQLGLPLNSRLSPQEALAFRAFEDTDIKLKKSFPTMSDTQRRSMAREVLRDKGVIAKRKKSVPQS*
Ga0070711_1004091122	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FQAFENTDMKLKKSFPTLSDTQRQAMARDVLRDKGMLPKRKKSS*
Ga0070663_1011840351	3300005455	Corn Rhizosphere	QAFQAFENTDMKLRKSFPTMSDTQRQSMARDVLRDKGVLPKPKKRA*
Ga0068867_1002496292	3300005459	Miscanthus Rhizosphere	VDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR*
Ga0070706_1017855961	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RRIRKQLGLPLSSRLSPKEALAFRAFEDTDIKLKKSFPTMSDTQRRSMAREVLRDKGVIAKRKKSVPQS*
Ga0070679_1000119571	3300005530	Corn Rhizosphere	AFQAFENTDMKLKKSFPTLSDTQRQAMARDILRDKGMLPRKKKAR*
Ga0070679_1001279711	3300005530	Corn Rhizosphere	GNSKRREIRRKLGLPESAKLTPEQAQAFQAFENTDMKLRKSFPTMSDTQRQSMARDVLRDKGVLPKPKKRA*
Ga0068855_1015362252	3300005563	Corn Rhizosphere	QAAAFQAFENTDMKLKKSFPDISDTQRQAMAREVLRDKGMLPKKKKTSAS*
Ga0068855_1016761522	3300005563	Corn Rhizosphere	AFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGVLPKQKRAKK*
Ga0068855_1022594571	3300005563	Corn Rhizosphere	QAQAFRTFQDTDMKLKKSFPTVSDTQRELMARDVLRDRGMLPKQKLSSGKRG*
Ga0068857_1019974781	3300005577	Corn Rhizosphere	EIRKKLGLPESSRLTPEQAAAFQAFENTDMKLKKSFPDISDTQRQAMAREVLRDKGMLPKKKKTSAS*
Ga0068857_1023821341	3300005577	Corn Rhizosphere	AFENTDMKLKKSFPTMSDTQRQAVAREMLRDKGVLPKQKKAK*
Ga0068856_1012252292	3300005614	Corn Rhizosphere	ENTDMKLKKSFPTLSDTQRQAMARDVLRDKGMLPKKKKAR*
Ga0068858_1007742062	3300005842	Switchgrass Rhizosphere	LLLARVVGNSQRRRIRKQLGLPLSSRLSPKEALAFRAFEDTDIKLKKSFPTMSDTQRRSMAREVLRDKGVIAKRKKSVPQS*
Ga0068860_1010879082	3300005843	Switchgrass Rhizosphere	LARVVGNSQRRRIRKQLGLPLNSRLSPQEALAFRAFEDTDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVPQS*
Ga0070716_1009614192	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GMPLNAKLTDQQAEAFRAFEDTDMRLKKTFPTMSDTQRESMARDVLRDKGMLPKKKR*
Ga0070712_1002043581	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	FENTDMKLKKSFPTMSDTQRQAMAREVLRDKGVLPKQKKAK*
Ga0070712_1019100852	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AFENTDMKLKKSFPTLSDTQRQAMARDILRDKGMLPRKKKAR*
Ga0075422_106216411	3300006196	Populus Rhizosphere	FENTDMKLKKSFPTMSDTQRQSMAREVLRDKGMLPKKKKTSAQ*
Ga0075425_1003760461	3300006854	Populus Rhizosphere	TDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVPQS*
Ga0079219_104042501	3300006954	Agricultural Soil	LTAQQAQAFRTFQDTDMKLKKSFPTVSDTQRELMARDVLRDRGMLPKQKISSGKKRG*
Ga0075435_1004467591	3300007076	Populus Rhizosphere	EDTDMRLKKTFPTMSDTQRESMARDVLRDKGMLPKKKR*
Ga0105251_102636371	3300009011	Switchgrass Rhizosphere	ARLVGNSKRREIRKKLGLPVDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR*
Ga0105240_122048541	3300009093	Corn Rhizosphere	NAKRRQIRKKLGLPESARLTPQQANAFQAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR*
Ga0075418_130387681	3300009100	Populus Rhizosphere	SKRREIRKKLGLPESSRLTPEQAAAFQAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGMLPKKKKTSAQ*
Ga0134125_121501822	3300010371	Terrestrial Soil	SRLTPEQAAAFQAFENTDMKLRKSFPTMSDTQRQAMAREVLRDKGVLPKKKKTSAS*
Ga0134128_114413721	3300010373	Terrestrial Soil	PEQAQAFQAFENTDMKLRKSFPTMSDTQRQSMARDVLRDKGVLPKPKKRA*
Ga0105239_115755751	3300010375	Corn Rhizosphere	TPEQQQAFQAFENTDMKLKKSFPTLSDTQRQAMARDVLRDKGMLPKKKKAR*
Ga0134124_112158962	3300010397	Terrestrial Soil	ENTDMKLKKSFPTMSDTQREAMAREVLRDKGVLPKKKKRSA*
Ga0134121_115903461	3300010401	Terrestrial Soil	EQSQAFMAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR*
Ga0150985_1090789452	3300012212	Avena Fatua Rhizosphere	RETLKKLGLPLNASLTAQQAQAFRTFEDTDMKLKKSFPTVSDTQRELMARDVLRDRGMLPKQKLSSGQRA*
Ga0150984_1176993351	3300012469	Avena Fatua Rhizosphere	IRKRLGLPVDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGVLPKQKKGK*
Ga0157325_10071741	3300012485	Arabidopsis Rhizosphere	NSKRREIRKKLGLPVGSRLTPEQSAAFQAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR*
Ga0157349_10407881	3300012489	Unplanted Soil	KKSFPTMSDTQRQAMAREVLRDKGLLPKQKRSKR*
Ga0157287_10644131	3300012885	Soil	NSQRRRIRKQLGLPLSSRLSPKEALAFRAFEDTDIKLKKSFPTMSDTQRRSMAREVLRDKGVIAKRKKSVPQS*
Ga0164300_102665542	3300012951	Soil	RAFEDTDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVPQS*
Ga0164298_113272442	3300012955	Soil	KLTREQANAFQAFENTDMKLRKSFPTMSDTQRQVMARDVLRDKGMLPKKKKVK*
Ga0164299_103029701	3300012958	Soil	EQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR*
Ga0164299_103752401	3300012958	Soil	AAAFQAFENTDMKLKKSFPTMSDTQREAMAREVLRDKGVLPKKKKRSA*
Ga0164301_106269742	3300012960	Soil	ARLVGNSKRREIRKKLGLPVNARLTPEQASAFQAFENTDMKLKKSFPTLSDTQRQAMAREVLRDKGVLPKRKKAK*
Ga0164302_112794241	3300012961	Soil	EIRKKLGLPEGSRMTPEQAAAFQAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGMLPKKKKPR*
Ga0164309_105086751	3300012984	Soil	KLTPEQSQAFMAFENTDMKLKKSFPSMSDTQRQAMAREVLRDKGVLPKQKKAK*
Ga0164309_116930361	3300012984	Soil	NSQRRRIRKQLGLPLDSRLSPKEALAFRAFEDTDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVPQS*
Ga0164308_101619022	3300012985	Soil	LTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR*
Ga0164306_106238183	3300012988	Soil	IRKQLGLPLDSRLSPKDALAFRAFEDTDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVPQS*
Ga0164305_108245892	3300012989	Soil	NTDMKLKKSFPTMSDTQREAMAREVLRDKGVLPKKKKRSA*
Ga0164305_119490652	3300012989	Soil	MVGNSKRREIRKKLGLPEGSRMTPEQAAAFQAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGMLPKKKKPR*
Ga0157369_125178401	3300013105	Corn Rhizosphere	ARLVGNSKRREIRKKLGLPLNSRLNPEQAQAFQAFENTDMRLKKSFPTLSDTQRQAMARDVLRDKGLLPKQKRQKPQKPS*
Ga0163162_125386912	3300013306	Switchgrass Rhizosphere	MAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR*
Ga0157372_100327571	3300013307	Corn Rhizosphere	LTPEQQAAFMAFENTDMKLKKSFPTMTDTQRQSMARDVLRDRGMLPKKSKAR*
Ga0157372_126832191	3300013307	Corn Rhizosphere	SQRRRIRKQLGLPLDSRLSPKDALAFRAFEDTDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVPQS*
Ga0157372_127813251	3300013307	Corn Rhizosphere	IVLLARLVGNAKRREIRRKLGMPLNAKLTDQQAEAFRAFEDTDMRLKKTFPTMSDTQRESMARDVLRDKGMLPKKKR*
Ga0157372_130898731	3300013307	Corn Rhizosphere	EQQQAFQAFENTDMKLKKSFPTLSDTQRQAMARDVLRDKGMLPKQKKAR*
Ga0157375_111870791	3300013308	Miscanthus Rhizosphere	NTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKH*
Ga0157380_131700942	3300014326	Switchgrass Rhizosphere	QEALAFRAFEDTDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVPQS*
Ga0190274_120572571	3300018476	Soil	PLDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR
Ga0173481_108557682	3300019356	Soil	LAFRAFEDTDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVPQS
Ga0206356_109232012	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	QAFQAFENTDMKLKKSFPTMSDTQRQAMARDVLRDKGVLPKRKKSG
Ga0206354_109011192	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	AFENTDMKLRKSFPTMSDTQRQSMARDVLRDKGVLPKPKKRA
Ga0207666_10063002	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	LARLVGNSKRREIRKKLGLPVDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR
Ga0207656_101192501	3300025321	Corn Rhizosphere	KEALAFRAFEDTDIKLKKSFPTMSDTQRRSMAREVLRDKGVIAKRKKSVPQS
Ga0207688_101116902	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VLARLVGNSKRREIRKKLGLPVDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR
Ga0207680_100544613	3300025903	Switchgrass Rhizosphere	PEDARLTPEQAAAFQAFENTDMKLKKSFPTMSDTQREAMAREVLRDKGVLPKQKRKSVS
Ga0207660_106913331	3300025917	Corn Rhizosphere	PEQQAAFMAFENTDMKLKKSFPTMTDTQRQSMARDVLRDRGMLPKKSKAR
Ga0207660_115595871	3300025917	Corn Rhizosphere	AFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR
Ga0207657_105568452	3300025919	Corn Rhizosphere	RREIRKKLGLPESSRLTPEQAAAFQAFENTDMKLKKSFPDISDTQRQAMAREVLRDKGMLPKKKKTSAS
Ga0207649_107188802	3300025920	Corn Rhizosphere	LTPEQQQAFQAFENTDMKLKKSFPTLSDTQRQAMARDILRDKGMLPRKKKAR
Ga0207646_108927821	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LARVVGNSQRRRIRKQLGLPLSSRLSPKEALAFRAFEDTDIKLKKSFPTMSDTQRRSMAREVLRDKGVIAKRKKSVPQS
Ga0207700_115149551	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LARMVGNSKRREIRKKLGLPVDSRLTPEQQQAFQAFENTDMKLKKSFPTLSDTQRQAMARDVLRDKGMLPKKKKAR
Ga0207701_107042022	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR
Ga0207644_101127371	3300025931	Switchgrass Rhizosphere	KKLGLPVDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR
Ga0207644_109249092	3300025931	Switchgrass Rhizosphere	ENTDMKLKKSFPTMSDTQRQSMAREVLRDKGVLPKQKRAKK
Ga0207706_106651421	3300025933	Corn Rhizosphere	RKKLGLPEGARLTPEQAAAFQAFENTDMKLKKSFPTLSDTQRQAMARDVLRDKGMLPKRKKSS
Ga0207706_111458611	3300025933	Corn Rhizosphere	QAAAFQAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGMLPKKKKPSAS
Ga0207691_100267557	3300025940	Miscanthus Rhizosphere	LPEGSRLTPEQAAAFQAFENTDMKLKKSFPTMSDTQREAMAREVLRDKGVLPKKKKRSA
Ga0207711_111148442	3300025941	Switchgrass Rhizosphere	GNSKRREIRKRLGLPVDSKLTPEQSQAFMAFENTDMKLKKSFPSISDTQRQAMAREVLRDKGILPKQKRAK
Ga0207640_102388432	3300025981	Corn Rhizosphere	QAFQAFENTDMKLKKSFPTLSDTQRQAMARDILRDKGMLPRKKKAR
Ga0207703_101234371	3300026035	Switchgrass Rhizosphere	KKLGLPVDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR
Ga0207639_104764291	3300026041	Corn Rhizosphere	TPEQSQAFMAFDNTDMKLKKSFPTMSDTQRQSMAREVLRDKGVLPKQKRAKK
Ga0207639_106160111	3300026041	Corn Rhizosphere	VGNSQRRRIRKQLGLPLNSRLSPQEALAFRAFEDTDIKLKKSFPTMSDTQRQSMAREVLRDKGVIAKRKKSVPQS
Ga0207678_111971751	3300026067	Corn Rhizosphere	SKLTPEQSQAFMAFENTDMKLKKSFPSISDTQRQAMAREVLRDKGILPKQKRAK
Ga0207708_116378381	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	RKLGLPEDARLTPEQAAAFQAFENTDMKLKKSFPTMSDTQREAMAREVLRDKGVLPKQKRKSVS
Ga0207702_101662872	3300026078	Corn Rhizosphere	IRKKLGLPVNARLTPEQASAFQAFENTDMKLKKSFPTLSDTQRQAMARDVLRDKGMLPKRKKSS
Ga0207702_111623341	3300026078	Corn Rhizosphere	ENTDMKLKKSFPTLSDTQRQAMARDVLRDKGMLPKKKKAR
Ga0207702_114315391	3300026078	Corn Rhizosphere	MPLNAKLTDQQAEAFRAFEDTDMRLKKTFPTMSDTQRESMARDVLRDKGMLPKKKR
Ga0207674_106800282	3300026116	Corn Rhizosphere	LGLPVDSRLTPEQQQAFQAFENTDMKLKKSFPTLSDTQRQAMARDILRDKGMLPRKKKAR
Ga0207674_116404662	3300026116	Corn Rhizosphere	RREIRKRLGLPVDSKLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQAVAREMLRDKGVLPKQKKAK
Ga0209970_10192142	3300027614	Arabidopsis Thaliana Rhizosphere	MRHLRRAKRREIRKKLGLPVGSRLTPEQSAAFQAFENTDMKLKKSFPTMTDTQRQAMAREVLRDKGMLPKKKKTSAS
Ga0209074_103159661	3300027787	Agricultural Soil	KRREIRRKLGMPLNAKLTDQQADAFRAFEDTDMRLKKTFPTMSDTQRESMARDVLRDKGMLPKKKR
Ga0268264_101570491	3300028381	Switchgrass Rhizosphere	KLTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRAKR
Ga0307497_101637961	3300031226	Soil	AFMAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR
Ga0307408_1019550451	3300031548	Rhizosphere	MGFENTDMKLRQTFPTMSDTQRQSMAREVLRDKGMLPKKKKSG
Ga0310886_104684501	3300031562	Soil	KQLGLPLNSRLSPQEALAFRAFEDTDIKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRSKR
Ga0310900_105658392	3300031908	Soil	PEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGMLPKQKRAKR
Ga0310885_101430802	3300031943	Soil	NSKRREIRKKLGLPEGSRLTPEQAAAFQAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR
Ga0310884_100725792	3300031944	Soil	MAFENTDMKLKKSFPTMSDTQRQSMAREVLRDKGLLPKQKRAKR
Ga0310906_104970551	3300032013	Soil	QLGLPLNSRLSPQEALAFRAFEDTDIKLKKSFPTMSDTQRRSMAREVLRDKGVIAKRKKSVPQS
Ga0310906_110887192	3300032013	Soil	LTPEQSQAFMAFENTDMKLKKSFPTMSDTQRQAMAREVLRDKGLLPKQKRSKR
Ga0308173_122857132	3300032074	Soil	MKLKKSFPTLSDTQRQAMARDVLRDKGMLPKRKKTR
Ga0316624_106548072	3300033486	Soil	LTPLQAQAFHAFESTDMQLKKSFPNISDTQRQAMARDVLRDKGMLPKKKKKSS

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign